RchiOBHm_Chr2g0118811

Autophagy-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0005035
Physical Location & Seq
Reverse (-)
31005006 .. 31009231
4226 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1926 bp
ATGGCATCTTCTCATGGTAATAATACTCACTCTGAAGCAGCAATGAAGGAACAAATAATCACTGAATTCTATGCTAAAAGTCTTCACATAATTCTTGAGTCGAGGACCCCATATGTGTCCTCAAGAAATTATAGTGGCGAACAAGCCTTGTCGTCGCCATCATCTTCCTCTTCGTCCTCCTCGAGTGTGAGGCCAAGGGATAAGTGGTTTAATTTAGCTCTAAGAGAATGCCCTGCTGCGCTGGAGAATCTTGATCTCTGGCGCCAGAGCAATTTTGAACCTATGGTGGTTGATGTGGTTTTGGTCCAGAGACGACTTGTTAGTGACCTGGTGGAATGTTCACCTAGAACGGATCTTGCTAGGAACTTGTCATTGAAAGAGCGGTATCCATACTGTTGGAATTATGAGCAGGAAGATTTTTGGTGTGAGGCAAAGAGTGAAAAGATTATAGAGAGATGGGTACTGCAGTATGATACTCGCAAGACTAGAGATACAAAATCAGGGAGTAGGAGGTCAAGCAATAATCCTTTACAGATGTTGTATAAGAAATCAATATTACTCTTGAGGTCTTTGTATGTTACTGTTAGGCTTTTGCCTGCTTATAAAATTTATCGTGACCTCAATTCGTCTGGCCAAATTCTTCCATTTACTCTTGCTCACCGGGTGGCCTCTTTTGCTGAGCCCTTCACATGTAGAGAAGATGCAGAAATGCAGCGGTTTGAGTTTACCCCTGTGGATACGGGTTGTGGTAGGCTTTGCCTTTCAGTGTTGTATTGTTCATCACTTTCAGATGTAAGCTCTGAACCATCGACTCCTATGTCTCCACAAGTTATACCAGACTATGTTGGGAGCCCATTGGCAGACCCGCTTAAAAGGTTCCCATCCCTTCCTGTGACAGGATCATTATCACGTGCCACTCCAGTATCGTCTTCATTCTCGAGGCGTCATAGTTGGAGTTATGACCATGGTATAGATTCACCACCTTCAGTTTCTTTCTCACCTTCGCCCACGCGTTCAGAACCTCATGCTTCAATTTCTAACCCAAGATCTCGCCATTTCCCACCCACAAGCTTACCACGTTATCCGCCTGAAACATCTCTTGATTATAAGAAGGATGTAGGTTTTTATGAGTATTGTCCTTCACCTGGCTTTTCTCCCGCACTGTCCCCATCAGCCTCTCCATCATTGCCAATCTCTATTCCTGGCAATCATGTTTCAAAAAATCTGTTACGATCTGAGAGTGCACCGGTCAGTGCCCCAGTGGCCAAACGTGCTAATTCCCCTGCATCCTCCCAGAAGCTAAATTTTCCTCCATCTCCCCCCCTTACGAGTACAAGTTCTGGTACTTTTAAGACTGATAAAGCTACAGTTGGGACATCAGTTGAAAAGTTATTCTCTTTTGGGAAAGGGGAGTCTAGACAATGTTCTGGGCTTAAGATATCATCAGGCGGCTCACCCCAGATATCCTTTTCCAGAAGCTCCACTAAGTCTTTTCCTGATGATTTTGATGATTCGGAGTATCCTTGCCCATTTGATTATGATGATGATGTGACAGACCCTGGTAGCAGACCTGAATCCTTTGACCAAAGGCATGAGCCTGGAGGATTATTTCCAATTAAAAAATCCCAAGATGCTGCTGTTGGCGCGCTTGTAAGAATGCTAAAGAAAGCCCCACCTCTTCGGCAAGAGGTCTCAGATTCAGTAAGTTTGTCACAAGGCTGCAGGCCTGAAATGTGGAGTGATGGTAAACAAGAGGCCAATCTTTCTTCTGAGAGTCAGGCACCAGTTCAGCCTGCTGATTCTTCAACTGTTATATCATCAGGGCTCATAACATCAAAAACTACAGCTGATGCCTTAGAAGAGCTCCAAAGTTACAGGGATATAAAAAACTCGTTACTGGCGCAAAGTAGTAAGTCTCACGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04136 ko04138 ko04140 ko04211 map04136 map04138 map04140 map04211
Pfam Domains
Protein Families
ATG13

Protein Analysis

641

Amino Acids

70.71

Weight (kDa)

7.89

Isoelectric Point (pI)

72.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATG13 PF10033 20 - 259 2.6e-41 Autophagy-related protein 13
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 603, 1107
AasI GACNNNNNNGTC 1 cut(s) 817
AccB1I GGYRCC 2 cut(s) 261, 1780
AccBSI CCGCTC 1 cut(s) 382
AccII CGCG 2 cut(s) 1012, 1646
AciI CCGC 6 cut(s) 382, 715, 866, 1085, 1158, 1449
AclWI GGATC 2 cut(s) 360, 907
AcoI YGGCCR 2 cut(s) 631, 1263
AcsI RAATTY 4 cut(s) 65, 606, 636, 1303
AcuI CTGAAG 2 cut(s) 54, 969
AcvI CACGTG 2 cut(s) 911, 1921
AcyI GRCGYC 2 cut(s) 262, 943
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 3 cut(s) 462, 1333, 1345
AfiI CCNNNNNNNGG 2 cut(s) 896, 1145
AflII CTTAAG 1 cut(s) 1433
AflIII ACRYGT 3 cut(s) 689, 1010, 1920
AgeI ACCGGT 1 cut(s) 1246
AgsI TTSAA 6 cut(s) 278, 376, 1032, 1218, 1385, 1806
AjnI CCWGG 5 cut(s) 327, 1144, 1201, 1558, 1597
AluBI AGCT 8 cut(s) 218, 798, 1071, 1300, 1364, 1479, 1847, 1864
AluI AGCT 8 cut(s) 218, 798, 1071, 1300, 1364, 1479, 1847, 1864
Alw21I GWGCWC 2 cut(s) 1246, 1866
Alw26I GTCTC 4 cut(s) 304, 825, 1696, 1920
Alw44I GTGCAC 1 cut(s) 1242
AlwI GGATC 2 cut(s) 360, 907
AlwNI CAGNNNCTG 1 cut(s) 1559
Ama87I CYCGRG 2 cut(s) 181, 937
AoxI GGCC 6 cut(s) 191, 631, 666, 1263, 1724, 1755
ApaLI GTGCAC 1 cut(s) 1242
ApeKI GCWGC 5 cut(s) 38, 236, 712, 1634, 1719
ApoI RAATTY 4 cut(s) 65, 606, 636, 1303
AsiGI ACCGGT 1 cut(s) 1246
AspLEI GCGC 5 cut(s) 241, 264, 1646, 1648, 1903
AspS9I GGNCC 2 cut(s) 105, 304
AsuC2I CCSGG 1 cut(s) 662
AsuHPI GGTGA 6 cut(s) 333, 650, 969, 990, 1134, 1446
AvaI CYCGRG 2 cut(s) 181, 937
AvaII GGWCC 2 cut(s) 105, 304
BaeGI GKGCMC 2 cut(s) 1246, 1258
BaeI ACNNNNGTAYC 4 cut(s) 452, 485, 906, 939
BalI TGGCCA 2 cut(s) 633, 1265
BanI GGYRCC 2 cut(s) 261, 1780
BanII GRGCYC 4 cut(s) 684, 854, 1827, 1866
BbrPI CACGTG 2 cut(s) 911, 1921
BbsI GAAGAC 2 cut(s) 74, 921
Bbv12I GWGCWC 2 cut(s) 1246, 1866
BbvI GCAGC 5 cut(s) 50, 223, 724, 1621, 1706
BccI CCATC 8 cut(s) 166, 450, 814, 889, 1177, 1189, 1321, 1736
BciT130I CCWGG 5 cut(s) 329, 1146, 1203, 1560, 1599
BciVI GTATCC 3 cut(s) 396, 730, 1530
BcnI CCSGG 1 cut(s) 662
BcoDI GTCTC 4 cut(s) 304, 825, 1696, 1920
BfaI CTAG 4 cut(s) 345, 360, 486, 1416
BfmI CTRYAG 4 cut(s) 464, 1365, 1720, 1842
BfoI RGCGCY 1 cut(s) 265
BfrI CTTAAG 1 cut(s) 1433
BfuI GTATCC 3 cut(s) 396, 730, 1530
BglI GCCNNNNNGGC 1 cut(s) 1262
BglII AGATCT 1 cut(s) 1046
BisI GCNGC 6 cut(s) 39, 237, 713, 1450, 1635, 1720
BlpI GCTNAGC 1 cut(s) 678
BlsI GCNGC 6 cut(s) 40, 238, 714, 1451, 1636, 1721
Bme1390I CCNGG 6 cut(s) 329, 662, 1146, 1203, 1560, 1599
Bme18I GGWCC 2 cut(s) 105, 304
BmeT110I CYCGRG 2 cut(s) 181, 937
BmgT120I GGNCC 2 cut(s) 105, 304
BmiI GGNNCC 5 cut(s) 107, 263, 851, 878, 1782
BmrFI CCNGG 6 cut(s) 329, 662, 1146, 1203, 1560, 1599
BmrI ACTGGG 1 cut(s) 1253
BmsI GCATC 5 cut(s) 14, 691, 1295, 1621, 1840
BmuI ACTGGG 1 cut(s) 1253
BpiI GAAGAC 2 cut(s) 74, 921
BpmI CTGGAG 3 cut(s) 263, 903, 1620
Bpu1102I GCTNAGC 1 cut(s) 678
BpuEI CTTGAG 3 cut(s) 106, 116, 583
BpuMI CCSGG 1 cut(s) 662
BsaAI YACGTR 2 cut(s) 911, 1921
BsaBI GATNNNNATC 1 cut(s) 904
BsaHI GRCGYC 2 cut(s) 262, 943
BsaI GGTCTC 1 cut(s) 1696
BsaJI CCNNGG 3 cut(s) 194, 964, 1558
BsaWI WCCGGW 1 cut(s) 1246
BsaXI ACNNNNNCTCC 2 cut(s) 1729, 1759
Bsc4I CCNNNNNNNGG 2 cut(s) 896, 1145
Bse118I RCCGGY 1 cut(s) 1246
Bse1I ACTGG 4 cut(s) 920, 1259, 1784, 1902
Bse3DI GCAATG 2 cut(s) 48, 1184
Bse8I GATNNNNATC 1 cut(s) 904
BseBI CCWGG 5 cut(s) 329, 1146, 1203, 1560, 1599
BseDI CCNNGG 3 cut(s) 194, 964, 1558
BseGI GGATG 3 cut(s) 881, 1120, 1286
BseJI GATNNNNATC 1 cut(s) 904
BseLI CCNNNNNNNGG 2 cut(s) 896, 1145
BseMI GCAATG 2 cut(s) 48, 1184
BseMII CTCAG 4 cut(s) 669, 1227, 1707, 1761
BseNI ACTGG 4 cut(s) 920, 1259, 1784, 1902
BsePI GCGCGC 1 cut(s) 1644
BseRI GAGGAG 1 cut(s) 169
BseSI GKGCMC 2 cut(s) 1246, 1258
BseXI GCAGC 5 cut(s) 50, 223, 724, 1621, 1706
Bsh1236I CGCG 2 cut(s) 1012, 1646
BshFI GGCC 6 cut(s) 193, 633, 668, 1265, 1726, 1757
BshNI GGYRCC 2 cut(s) 261, 1780
BshTI ACCGGT 1 cut(s) 1246
BsiHKAI GWGCWC 2 cut(s) 1246, 1866
BsiHKCI CYCGRG 2 cut(s) 181, 937
BsiSI CCGG 2 cut(s) 661, 1247
BslFI GGGAC 2 cut(s) 1150, 1387
BslI CCNNNNNNNGG 2 cut(s) 896, 1145
BsmAI GTCTC 4 cut(s) 304, 825, 1696, 1920
BsmBI CGTCTC 1 cut(s) 304
BsmFI GGGAC 2 cut(s) 1150, 1387
BsmI GAATGC 2 cut(s) 233, 1662
BsnI GGCC 6 cut(s) 193, 633, 668, 1265, 1726, 1757
Bso31I GGTCTC 1 cut(s) 1696
BsoBI CYCGRG 2 cut(s) 181, 937
Bsp1286I GDGCHC 6 cut(s) 684, 854, 1246, 1258, 1827, 1866
Bsp143I GATC 5 cut(s) 253, 352, 899, 1046, 1232
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 1 cut(s) 964
BspACI CCGC 6 cut(s) 382, 715, 866, 1085, 1158, 1449
BspANI GGCC 6 cut(s) 193, 633, 668, 1265, 1726, 1757
BspCNI CTCAG 4 cut(s) 670, 1228, 1706, 1762
BspFNI CGCG 2 cut(s) 1012, 1646
BspLI GGNNCC 5 cut(s) 107, 263, 851, 878, 1782
BspMAI CTGCAG 2 cut(s) 468, 1724
BspPI GGATC 2 cut(s) 360, 907
BspQI GCTCTTC 1 cut(s) 1854
BspT107I GGYRCC 2 cut(s) 261, 1780
BspTI CTTAAG 1 cut(s) 1433
BspTNI GGTCTC 1 cut(s) 1696
BsrBI CCGCTC 1 cut(s) 382
BsrDI GCAATG 2 cut(s) 48, 1184
BsrFI RCCGGY 1 cut(s) 1246
BsrI ACTGG 4 cut(s) 920, 1259, 1784, 1902
BssAI RCCGGY 1 cut(s) 1246
BssECI CCNNGG 3 cut(s) 194, 964, 1558
BssHII GCGCGC 1 cut(s) 1644
BssMI GATC 5 cut(s) 253, 352, 899, 1046, 1232
BssNI GRCGYC 2 cut(s) 262, 943
BssT1I CCWWGG 2 cut(s) 194, 964
Bst2UI CCWGG 5 cut(s) 329, 1146, 1203, 1560, 1599
Bst4CI ACNGT 5 cut(s) 395, 583, 1164, 1369, 1810
Bst6I CTCTTC 3 cut(s) 175, 1683, 1854
BstACI GRCGYC 2 cut(s) 262, 943
BstAFI CTTAAG 1 cut(s) 1433
BstBAI YACGTR 2 cut(s) 911, 1921
BstC8I GCNNGC 4 cut(s) 597, 1646, 1724, 1794
BstDEI CTNAG 7 cut(s) 221, 678, 1236, 1485, 1693, 1770, 1855
BstDSI CCRYGG 1 cut(s) 964
BstENI CCTNNNNNAGG 1 cut(s) 894
BstF5I GGATG 3 cut(s) 881, 1120, 1286
BstFNI CGCG 2 cut(s) 1012, 1646
BstH2I RGCGCY 1 cut(s) 265
BstHHI GCGC 5 cut(s) 241, 264, 1646, 1648, 1903
BstKTI GATC 5 cut(s) 256, 355, 902, 1049, 1235
BstMAI GTCTC 4 cut(s) 304, 825, 1696, 1920
BstMBI GATC 5 cut(s) 253, 352, 899, 1046, 1232
BstMWI GCNNNNNNNGC 4 cut(s) 674, 1262, 1271, 1643
BstNI CCWGG 5 cut(s) 329, 1146, 1203, 1560, 1599
BstNSI RCATGY 1 cut(s) 693
BstSCI CCNGG 6 cut(s) 327, 660, 1144, 1201, 1558, 1597
BstSFI CTRYAG 4 cut(s) 464, 1365, 1720, 1842
BstSLI GKGCMC 2 cut(s) 1246, 1258
BstUI CGCG 2 cut(s) 1012, 1646
BstV1I GCAGC 5 cut(s) 50, 223, 724, 1621, 1706
BstV2I GAAGAC 2 cut(s) 74, 921
BstX2I RGATCY 2 cut(s) 352, 1046
BstXI CCANNNNNNTGG 1 cut(s) 396
BstYI RGATCY 2 cut(s) 352, 1046
BsuI GTATCC 3 cut(s) 396, 730, 1530
BsuRI GGCC 6 cut(s) 193, 633, 668, 1265, 1726, 1757
BtgI CCRYGG 1 cut(s) 964
BtsCI GGATG 3 cut(s) 881, 1120, 1286
BtsIMutI CAGTG 5 cut(s) 60, 771, 1160, 1258, 1266
Cac8I GCNNGC 4 cut(s) 597, 1646, 1724, 1794
CaiI CAGNNNCTG 1 cut(s) 1559
CfoI GCGC 5 cut(s) 241, 264, 1646, 1648, 1903
Cfr10I RCCGGY 1 cut(s) 1246
Cfr13I GGNCC 2 cut(s) 105, 304
CseI GACGC 1 cut(s) 932
CsiI ACCWGGT 1 cut(s) 327
Csp6I GTAC 3 cut(s) 461, 1332, 1344
CspAI ACCGGT 1 cut(s) 1246
CviAII CATG 6 cut(s) 14, 690, 965, 1025, 1211, 1592
CviQI GTAC 3 cut(s) 461, 1332, 1344
DdeI CTNAG 7 cut(s) 221, 678, 1236, 1485, 1693, 1770, 1855
DinI GGCGCC 1 cut(s) 263
DpnI GATC 5 cut(s) 255, 354, 901, 1048, 1234
DpnII GATC 5 cut(s) 253, 352, 899, 1046, 1232
DraIII CACNNNGTG 1 cut(s) 664
DrdI GACNNNNNNGTC 1 cut(s) 817
DseDI GACNNNNNNGTC 1 cut(s) 817
EaeI YGGCCR 2 cut(s) 631, 1263
Eam1104I CTCTTC 3 cut(s) 175, 1683, 1854
EarI CTCTTC 3 cut(s) 175, 1683, 1854
EciI GGCGGA 1 cut(s) 1074
Ecl136II GAGCTC 1 cut(s) 1864
Eco130I CCWWGG 2 cut(s) 194, 964
Eco147I AGGCCT 1 cut(s) 1726
Eco24I GRGCYC 4 cut(s) 684, 854, 1827, 1866
Eco31I GGTCTC 1 cut(s) 1696
Eco32I GATATC 2 cut(s) 1440, 1464
Eco47I GGWCC 2 cut(s) 105, 304
Eco53kI GAGCTC 1 cut(s) 1864
Eco57I CTGAAG 2 cut(s) 54, 969
Eco72I CACGTG 2 cut(s) 911, 1921
Eco88I CYCGRG 2 cut(s) 181, 937
EcoICRI GAGCTC 1 cut(s) 1864
EcoNI CCTNNNNNAGG 1 cut(s) 894
EcoO109I RGGNCCY 1 cut(s) 105
EcoRI GAATTC 1 cut(s) 65
EcoRII CCWGG 5 cut(s) 327, 1144, 1201, 1558, 1597
EcoRV GATATC 2 cut(s) 1440, 1464
EcoT14I CCWWGG 2 cut(s) 194, 964
EcoT38I GRGCYC 4 cut(s) 684, 854, 1827, 1866
EgeI GGCGCC 1 cut(s) 263
EheI GGCGCC 1 cut(s) 263
ErhI CCWWGG 2 cut(s) 194, 964
Esp3I CGTCTC 1 cut(s) 304
FaeI CATG 6 cut(s) 17, 693, 968, 1028, 1214, 1595
FaqI GGGAC 2 cut(s) 1150, 1387
FatI CATG 6 cut(s) 13, 689, 964, 1024, 1210, 1591
FauI CCCGC 2 cut(s) 873, 1165
FauNDI CATATG 1 cut(s) 112
Fnu4HI GCNGC 6 cut(s) 39, 237, 713, 1450, 1635, 1720
FokI GGATG 3 cut(s) 868, 1127, 1273
FriOI GRGCYC 4 cut(s) 684, 854, 1827, 1866
Fsp4HI GCNGC 6 cut(s) 39, 237, 713, 1450, 1635, 1720
FspBI CTAG 4 cut(s) 345, 360, 486, 1416
GlaI GCGC 5 cut(s) 240, 263, 1645, 1647, 1902
GluI GCNGC 6 cut(s) 39, 237, 713, 1450, 1635, 1720
GsuI CTGGAG 3 cut(s) 263, 903, 1620
HaeII RGCGCY 1 cut(s) 265
HaeIII GGCC 6 cut(s) 193, 633, 668, 1265, 1726, 1757
HapII CCGG 2 cut(s) 661, 1247
HgaI GACGC 1 cut(s) 932
HhaI GCGC 5 cut(s) 241, 264, 1646, 1648, 1903
Hin1I GRCGYC 2 cut(s) 262, 943
Hin1II CATG 6 cut(s) 17, 693, 968, 1028, 1214, 1595
Hin6I GCGC 5 cut(s) 239, 262, 1644, 1646, 1901
HinP1I GCGC 5 cut(s) 239, 262, 1644, 1646, 1901
HindIII AAGCTT 1 cut(s) 1069
HpaII CCGG 2 cut(s) 661, 1247
HphI GGTGA 6 cut(s) 333, 650, 969, 990, 1134, 1446
Hpy166II GTNNAC 4 cut(s) 341, 726, 1244, 1748
Hpy188I TCNGA 8 cut(s) 34, 790, 802, 1018, 1237, 1516, 1696, 1771
Hpy8I GTNNAC 4 cut(s) 341, 726, 1244, 1748
Hpy99I CGWCG 1 cut(s) 157
HpyAV CCTTC 7 cut(s) 40, 694, 896, 993, 1011, 1105, 1149
HpyCH4III ACNGT 5 cut(s) 395, 583, 1164, 1369, 1810
HpyCH4IV ACGT 4 cut(s) 910, 1078, 1270, 1920
HpyCH4V TGCA 6 cut(s) 466, 704, 712, 1244, 1286, 1722
HpyF10VI GCNNNNNNNGC 4 cut(s) 674, 1262, 1271, 1643
HpyF3I CTNAG 7 cut(s) 221, 678, 1236, 1485, 1693, 1770, 1855
HpySE526I ACGT 4 cut(s) 910, 1078, 1270, 1920
Hsp92I GRCGYC 2 cut(s) 262, 943
Hsp92II CATG 6 cut(s) 17, 693, 968, 1028, 1214, 1595
HspAI GCGC 5 cut(s) 239, 262, 1644, 1646, 1901
KasI GGCGCC 1 cut(s) 261
Kzo9I GATC 5 cut(s) 253, 352, 899, 1046, 1232
LguI GCTCTTC 1 cut(s) 1854
LmnI GCTCC 3 cut(s) 849, 1484, 1869
Lsp1109I GCAGC 5 cut(s) 50, 223, 724, 1621, 1706
LweI GCATC 5 cut(s) 14, 691, 1295, 1621, 1840
MabI ACCWGGT 1 cut(s) 327
MaeI CTAG 4 cut(s) 345, 360, 486, 1416
MaeII ACGT 4 cut(s) 910, 1078, 1270, 1920
MaeIII GTNAC 9 cut(s) 323, 577, 614, 892, 1227, 1549, 1710, 1871, 1893
MalI GATC 5 cut(s) 255, 354, 901, 1048, 1234
MbiI CCGCTC 1 cut(s) 382
MboI GATC 5 cut(s) 253, 352, 899, 1046, 1232
MflI RGATCY 2 cut(s) 352, 1046
MhlI GDGCHC 6 cut(s) 684, 854, 1246, 1258, 1827, 1866
MlsI TGGCCA 2 cut(s) 633, 1265
MluI ACGCGT 1 cut(s) 1010
MluNI TGGCCA 2 cut(s) 633, 1265
Mly113I GGCGCC 1 cut(s) 262
MlyI GAGTC 4 cut(s) 107, 805, 1421, 1783
MmeI TCCRAC 2 cut(s) 377, 932
Mox20I TGGCCA 2 cut(s) 633, 1265
MscI TGGCCA 2 cut(s) 633, 1265
MseI TTAA 5 cut(s) 210, 870, 1350, 1434, 1617
Msp20I TGGCCA 2 cut(s) 633, 1265
MspA1I CMGCKG 2 cut(s) 715, 1847
MspCI CTTAAG 1 cut(s) 1433
MspI CCGG 2 cut(s) 661, 1247
MspR9I CCNGG 6 cut(s) 329, 662, 1146, 1203, 1560, 1599
Mva1269I GAATGC 2 cut(s) 233, 1662
MvaI CCWGG 5 cut(s) 329, 1146, 1203, 1560, 1599
MvnI CGCG 2 cut(s) 1012, 1646
MwoI GCNNNNNNNGC 4 cut(s) 674, 1262, 1271, 1643
NarI GGCGCC 1 cut(s) 262
NciI CCSGG 1 cut(s) 662
NcoI CCATGG 1 cut(s) 964
NdeI CATATG 1 cut(s) 112
NdeII GATC 5 cut(s) 253, 352, 899, 1046, 1232
NlaIII CATG 6 cut(s) 17, 693, 968, 1028, 1214, 1595
NlaIV GGNNCC 5 cut(s) 107, 263, 851, 878, 1782
NmuCI GTSAC 5 cut(s) 323, 614, 892, 1549, 1710
NspI RCATGY 1 cut(s) 693
PaeR7I CTCGAG 2 cut(s) 181, 937
PauI GCGCGC 1 cut(s) 1644
PceI AGGCCT 1 cut(s) 1726
PciI ACATGT 1 cut(s) 689
PciSI GCTCTTC 1 cut(s) 1854
PcsI WCGNNNNNNNCGW 1 cut(s) 179
PctI GAATGC 2 cut(s) 233, 1662
PfeI GAWTC 6 cut(s) 247, 974, 1511, 1574, 1697, 1799
PinAI ACCGGT 1 cut(s) 1246
PkrI GCNGC 6 cut(s) 40, 238, 714, 1451, 1636, 1721
PleI GAGTC 4 cut(s) 106, 805, 1420, 1782
PluTI GGCGCC 1 cut(s) 265
PmaCI CACGTG 2 cut(s) 911, 1921
PmlI CACGTG 2 cut(s) 911, 1921
PpsI GAGTC 4 cut(s) 106, 805, 1420, 1782
Ppu21I YACGTR 2 cut(s) 911, 1921
PpuMI RGGWCCY 1 cut(s) 105
PscI ACATGT 1 cut(s) 689
PsiI TTATAA 2 cut(s) 603, 1107
Psp124BI GAGCTC 1 cut(s) 1866
Psp5II RGGWCCY 1 cut(s) 105
Psp6I CCWGG 5 cut(s) 327, 1144, 1201, 1558, 1597
PspCI CACGTG 2 cut(s) 911, 1921
PspGI CCWGG 5 cut(s) 327, 1144, 1201, 1558, 1597
PspN4I GGNNCC 5 cut(s) 107, 263, 851, 878, 1782
PspPI GGNCC 2 cut(s) 105, 304
PspPPI RGGWCCY 1 cut(s) 105
PspXI VCTCGAGB 1 cut(s) 181
PstI CTGCAG 2 cut(s) 468, 1724
PstNI CAGNNNCTG 1 cut(s) 1559
PsuI RGATCY 2 cut(s) 352, 1046
PteI GCGCGC 1 cut(s) 1644
PvuII CAGCTG 1 cut(s) 1847
RsaI GTAC 3 cut(s) 462, 1333, 1345
RsaNI GTAC 3 cut(s) 461, 1332, 1344
SacI GAGCTC 1 cut(s) 1866
SapI GCTCTTC 1 cut(s) 1854
SaqAI TTAA 5 cut(s) 210, 870, 1350, 1434, 1617
SatI GCNGC 6 cut(s) 39, 237, 713, 1450, 1635, 1720
Sau3AI GATC 5 cut(s) 253, 352, 899, 1046, 1232
Sau96I GGNCC 2 cut(s) 105, 304
SchI GAGTC 4 cut(s) 107, 805, 1421, 1783
ScrFI CCNGG 6 cut(s) 329, 662, 1146, 1203, 1560, 1599
SduI GDGCHC 6 cut(s) 684, 854, 1246, 1258, 1827, 1866
SexAI ACCWGGT 1 cut(s) 327
SfaNI GCATC 5 cut(s) 14, 691, 1295, 1621, 1840
SfcI CTRYAG 4 cut(s) 464, 1365, 1720, 1842
SfoI GGCGCC 1 cut(s) 263
Sfr274I CTCGAG 2 cut(s) 181, 937
SinI GGWCC 2 cut(s) 105, 304
SlaI CTCGAG 2 cut(s) 181, 937
SmlI CTYRAG 6 cut(s) 95, 121, 181, 562, 937, 1433
SmoI CTYRAG 6 cut(s) 95, 121, 181, 562, 937, 1433
SseBI AGGCCT 1 cut(s) 1726
SsiI CCGC 6 cut(s) 382, 715, 866, 1085, 1158, 1449
SspDI GGCGCC 1 cut(s) 261
SspI AATATT 1 cut(s) 555
SspMI CTAG 4 cut(s) 345, 360, 486, 1416
SstI GAGCTC 1 cut(s) 1866
StuI AGGCCT 1 cut(s) 1726
StyD4I CCNGG 6 cut(s) 327, 660, 1144, 1201, 1558, 1597
StyI CCWWGG 2 cut(s) 194, 964
TaaI ACNGT 5 cut(s) 395, 583, 1164, 1369, 1810
TaiI ACGT 4 cut(s) 913, 1081, 1273, 1923
TaqI TCGA 4 cut(s) 101, 182, 809, 938
TatI WGTACW 1 cut(s) 1331
TauI GCSGC 1 cut(s) 1452
TfiI GAWTC 6 cut(s) 247, 974, 1511, 1574, 1697, 1799
Tru1I TTAA 5 cut(s) 210, 870, 1350, 1434, 1617
Tru9I TTAA 5 cut(s) 210, 870, 1350, 1434, 1617
TscAI CASTG 5 cut(s) 67, 771, 1167, 1258, 1266
TseFI GTSAC 5 cut(s) 323, 614, 892, 1549, 1710
TseI GCWGC 5 cut(s) 38, 236, 712, 1634, 1719
Tsp45I GTSAC 5 cut(s) 323, 614, 892, 1549, 1710
TspDTI ATGAA 3 cut(s) 59, 768, 921
TspGWI ACGGA 1 cut(s) 365
TspRI CASTG 5 cut(s) 67, 771, 1167, 1258, 1266
Vha464I CTTAAG 1 cut(s) 1433
VneI GTGCAC 1 cut(s) 1242
VpaK11BI GGWCC 2 cut(s) 105, 304
XagI CCTNNNNNAGG 1 cut(s) 894
XapI RAATTY 4 cut(s) 65, 606, 636, 1303
XbaI TCTAGA 1 cut(s) 1415
XceI RCATGY 1 cut(s) 693
XcmI CCANNNNNNNNNTGG 1 cut(s) 201
XhoI CTCGAG 2 cut(s) 181, 937
XspI CTAG 4 cut(s) 345, 360, 486, 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.