Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012252

Physical Location & Seq

Genomic Coordinates Forward (+)

38268643 .. 38271326

Gene Structure 2684 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

ATGCAAGATCTTCTTTTAGTTGTAGCAAAACAGAGGGTTTTACATAATGCTCAGTTGGAAGCGGCTTCGATGCTCATAAACCTCAGAAGAACAATAGCCATTCCATTTCACCAAAAACCCACACTTTGCAAACTCCTCTCAACTCGTACACCAAATCCAAACTCCAACTCGACACAGCCTCTTTCAGAATCCCAACTCAAATCCTTGGTTCTCAGCCGCTACGCTCGCGGCAAATTCACCAACCTCCTCCAAAACGTCATCGCTTTACCCGCTGTTCTCCTCACCGCCTGCCAAAACCTCACCACCCCTCAAACCCAGAATGGCCTCCGCCTCTCCCTTCCCGACTCGGTCTCGAAGCGGTTCTCAATTCACGAAATGGGTCGCGAGCTCTGCGAGAATCGGTTCGATGTGGCAGCTTCTAGTGTCACAATGGCGGCCCCAAGAAACGGAGGTGAGTCTCTGGTCTTACCCAGTTTGAAACTCAAAGTTTTGATTGAAGCTATTAGGATTGTATTGGGGGTTGTTTATGATGAACGCTTTGTGACGTTTTCTTACGGCGGTCGTGTTAATATGGGGAGGCACACGGCCATTAGGTACCTTAAGAACTCTGTTGCAAATCCCAGTTGGTGGTTTAGCGTTAGCTTTAATGGGGGTAAGTTTGAACAACGACATGTAAATAAGCTATGCTTGTTTATGCACGAGAAAATAGAGGATGAGGTTTTGACTAATATCATCAAGACATTGTTTGAATGTGGCGCGGTGAGAATTGAATTGGGTAGTTGTTGCTTTGGAAGAGGGTTTCCTCAGGAGAGTGGGTTGAGTTCGATTTTAATGAACATTTACTTTAATGGTTTCGACAAAGAAATTCAAGAGATGCGTCTGAAGAAGAATCAGGAGCATCCCAAATTCGAGTCGAATGAGCTTGTTTCAGAGGATGGTGTTTTCTATAAGCCTGTCAAGATATATGCGGTTAGGTACTTGGATGAGATATTAGTGATGACGTCTGGGTCCAAAATGTTGACTATGGATTTGAAGAACTGGGTTGTCAAGTACTTAGAAGGGAGTTTGGAATTGATGGTGGATAAGATTAAAACATCTATTCATAGTGCAGTGTCTGAGAAGATTGATTTCATGGGCATGGAATTACAGGCAGTTCCACCTTCGGTGTTGCACCCCCCTATGTCTGAAAAAGCTATTAGAGCACGAAAAAAGTACCTTAGACAGAAGGAAGTCAGAGCTATAGAATTGAAAAATGCTAGAGAGAGGAACAGAAAAAAATTGGGAATGAAAATAATGAGCCATGTTTTTAAAAAGTTGAAGAGCAGTGATGGATTGAAATCTGAGTATCAAATTGAGAATCAAGTCAGAGAAATCTTTAGAACCTGGGCTGATGAAGTGGTGCAAGAGTTCCTTGAGTCATTGGATGAGCGTTGGGATTGGTATCGAAAGCTATCAGCAGGTAATTTTCTGTCTTTAAGACATATTAGACAACAATTGCCCGAAGAGCTTGTAGATGCTTATGATAAGTTCCAAGAGCAAGTAGACAAGCATTTGAACCCAGTCAGAGATAGAAAAGCAAGAGAGGAAGAAGAAAGGAGGGTAACAGAAGAAGCGGAGCAGAAATATGCCAAGAGAACAGTTGAGGATTTGACAAAGCTCTGTGTGAAAGCTGATGCGCCTATAGAAGTTTTGAGGAAGATGGTCAAGTTAATTGGGTTTACAAATCATATGGGTCGTCCCAGGCCAATCACTTTACTAACTGCTCTTGAAGATGCTGATATCATCAAGTGGTATGCAGGTGTAGGGAGAAGATTGCTTGATTTTTACTGCTGCTGCCATAACTTCAAGATGGTCAAAACTATTGTAACTTATCACTTGAGGTTCTCCTGCATCTTGACTCTTGCTGAAAAGCATGAATCTACCAAAAGTGAAGCCATGAAACATTATACTAAAGATTTGAAAGTCTTTGATATAAATGGAAATCAAGAAGTATACTTTCCCACAGAAAGAGAGGTAAAGATGATGGGAGATAAAAATCTTTCTGATCCAATACCTGTGGATGGGGCATTTTCTTTGGCTCTGATTAGATTAGCTTCTGATGAGCCTCCATATTCTTGTGTTGCTCATTTCTGTGACAGAACTGATACTATTGTTTATCGGGTACGATTATTGCAAAGTCGATTGAATCTGACCCCCGTGGATGATAAGAAATGGGTGCCGGGGATGGGTGCAATTAATGAGAGCCTCCATCTGAAATGCTTCCCTCTTTGTCCTGATCACATACATGATCTATACATGGGGAGCATTACCTTTCAAGATATTGATTGTACATCATTTGTGGATGTAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000959 GO:0000963 GO:0003674 GO:0003824 GO:0003964 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006278 GO:0006310 GO:0006314 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071897 GO:0090304 GO:0090615 GO:0140053 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Intron_maturas2 RVT_1

Protein Analysis

783

Amino Acids

89.99

Weight (kDa)

8.87

Isoelectric Point (pI)

43.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Intron_maturas2	PF01348	558 - 682	1e-16	Type II intron maturase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04050 AT5G04050
fragaria_vesca	FvH4_6g25070
malus_domestica	MD12G1089700.v1.1
prunus_persica	Prupe.7G047200_v2.0.a1 Prupe.7G047200_v2.0.a1 Prupe.7G047200_v2.0.a1
pyrus_communis	pycom12g07560
rosa_chinensis	RchiOBHm_Chr2g0124831
rosa_laevigata	RLG00000018826
rosa_multiflora	Rmu_co8339159.1_g000001
rosa_roxburghii	Rroxscaffold_2G00119620
rosa_rugosa	Rorug02G0253000
rosa_samantha	Rh2AG068200 Rh2AG312500 Rh2BG320700 Rh2CG300700 Rh2DG338000
rosa_wichuraiana	Rw2G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1787
AasI	GACNNNNNNGTC	1 cut(s)	1006
AatII	GACGTC	1 cut(s)	1004
Acc36I	ACCTGC	2 cut(s)	1448, 1787
Acc65I	GGTACC	1 cut(s)	594
AccB1I	GGYRCC	2 cut(s)	594, 2215
AccB7I	CCANNNNNTGG	1 cut(s)	627
AccI	GTMKAC	3 cut(s)	1542, 1992, 2346
AccII	CGCG	3 cut(s)	228, 384, 758
AclWI	GGATC	1 cut(s)	2039
AcoI	YGGCCR	1 cut(s)	585
AcsI	RAATTY	3 cut(s)	233, 864, 905
AcuI	CTGAAG	1 cut(s)	902
AcyI	GRCGYC	1 cut(s)	1001
AfaI	GTAC	7 cut(s)	148, 596, 977, 1052, 1214, 2163, 2329
AfiI	CCNNNNNNNGG	4 cut(s)	446, 627, 2060, 2225
AflII	CTTAAG	1 cut(s)	599
AflIII	ACRYGT	1 cut(s)	670
AjnI	CCWGG	2 cut(s)	1382, 1739
Alw21I	GWGCWC	2 cut(s)	390, 1204
Alw26I	GTCTC	2 cut(s)	355, 462
AlwI	GGATC	1 cut(s)	2039
AlwNI	CAGNNNCTG	1 cut(s)	1115
AoxI	GGCC	4 cut(s)	322, 435, 585, 1742
ApeKI	GCWGC	3 cut(s)	413, 1830, 1833
ApoI	RAATTY	3 cut(s)	233, 864, 905
ArsI	GACNNNNNNTTYG	2 cut(s)	1012, 1044
AseI	ATTAAT	1 cut(s)	2235
Asp700I	GAANNNNTTC	3 cut(s)	359, 401, 2258
Asp718I	GGTACC	1 cut(s)	594
AspLEI	GCGC	2 cut(s)	758, 1678
AspS9I	GGNCC	2 cut(s)	436, 1008
AsuC2I	CCSGG	1 cut(s)	2220
AsuHPI	GGTGA	6 cut(s)	101, 229, 274, 292, 464, 772
AvaII	GGWCC	1 cut(s)	1008
AxyI	CCTNAGG	1 cut(s)	804
BaeI	ACNNNNGTAYC	2 cut(s)	2136, 2169
BanI	GGYRCC	2 cut(s)	594, 2215
BanII	GRGCYC	1 cut(s)	390
BauI	CACGAG	1 cut(s)	698
Bbv12I	GWGCWC	2 cut(s)	390, 1204
BbvI	GCAGC	3 cut(s)	425, 1817, 1820
BccI	CCATC	9 cut(s)	929, 1069, 1322, 1693, 1843, 2017, 2054, 2218, 2256
BceAI	ACGGC	2 cut(s)	571, 600
BciT130I	CCWGG	2 cut(s)	1384, 1741
BclI	TGATCA	1 cut(s)	2275
BcnI	CCSGG	1 cut(s)	2220
BcoDI	GTCTC	2 cut(s)	355, 462
BfaI	CTAG	2 cut(s)	420, 1257
BfmI	CTRYAG	2 cut(s)	1239, 1680
BfrI	CTTAAG	1 cut(s)	599
BfuAI	ACCTGC	2 cut(s)	1448, 1787
BglII	AGATCT	1 cut(s)	7
BisI	GCNGC	7 cut(s)	63, 217, 229, 414, 435, 1831, 1834
BlsI	GCNGC	7 cut(s)	64, 218, 230, 415, 436, 1832, 1835
BmcAI	AGTACT	1 cut(s)	1052
Bme1390I	CCNGG	3 cut(s)	1384, 1741, 2220
Bme18I	GGWCC	1 cut(s)	1008
BmgT120I	GGNCC	2 cut(s)	436, 1008
BmiI	GGNNCC	4 cut(s)	438, 596, 1009, 2217
BmrFI	CCNGG	3 cut(s)	1384, 1741, 2220
BmrI	ACTGGG	4 cut(s)	465, 615, 1048, 1553
BmsI	GCATC	7 cut(s)	60, 864, 907, 1504, 1663, 1762, 1899
BmuI	ACTGGG	4 cut(s)	465, 615, 1048, 1553
BpuEI	CTTGAG	2 cut(s)	1433, 1897
BpuMI	CCSGG	1 cut(s)	2220
BsaBI	GATNNNNATC	3 cut(s)	1336, 1440, 2034
BsaHI	GRCGYC	1 cut(s)	1001
BsaI	GGTCTC	1 cut(s)	355
BsaJI	CCNNGG	5 cut(s)	204, 1383, 1739, 2196, 2219
BsaXI	ACNNNNNCTCC	2 cut(s)	800, 830
Bsc4I	CCNNNNNNNGG	4 cut(s)	446, 627, 2060, 2225
Bse1I	ACTGG	4 cut(s)	471, 621, 1043, 1559
Bse21I	CCTNAGG	1 cut(s)	804
Bse8I	GATNNNNATC	3 cut(s)	1336, 1440, 2034
BseBI	CCWGG	2 cut(s)	1384, 1741
BseDI	CCNNGG	5 cut(s)	204, 1383, 1739, 2196, 2219
BseGI	GGATG	9 cut(s)	718, 898, 940, 988, 1429, 2065, 2206, 2229, 2347
BseJI	GATNNNNATC	3 cut(s)	1336, 1440, 2034
BseLI	CCNNNNNNNGG	4 cut(s)	446, 627, 2060, 2225
BseMII	CTCAG	6 cut(s)	65, 97, 226, 818, 1107, 1332
BseNI	ACTGG	4 cut(s)	471, 621, 1043, 1559
BseRI	GAGGAG	3 cut(s)	125, 236, 269
BseXI	GCAGC	3 cut(s)	425, 1817, 1820
BsgI	GTGCAG	1 cut(s)	1128
Bsh1236I	CGCG	3 cut(s)	228, 384, 758
Bsh1285I	CGRYCG	1 cut(s)	562
BshFI	GGCC	4 cut(s)	324, 437, 587, 1744
BshNI	GGYRCC	2 cut(s)	594, 2215
BsiEI	CGRYCG	1 cut(s)	562
BsiHKAI	GWGCWC	2 cut(s)	390, 1204
BsiSI	CCGG	1 cut(s)	2219
BslFI	GGGAC	1 cut(s)	1722
BslI	CCNNNNNNNGG	4 cut(s)	446, 627, 2060, 2225
BsmAI	GTCTC	2 cut(s)	355, 462
BsmFI	GGGAC	1 cut(s)	1722
BsnI	GGCC	4 cut(s)	324, 437, 587, 1744
Bso31I	GGTCTC	1 cut(s)	355
Bsp1286I	GDGCHC	2 cut(s)	390, 1204
Bsp1407I	TGTACA	1 cut(s)	2327
Bsp143I	GATC	4 cut(s)	7, 2044, 2275, 2287
Bsp68I	TCGCGA	1 cut(s)	384
BspANI	GGCC	4 cut(s)	324, 437, 587, 1744
BspCNI	CTCAG	6 cut(s)	64, 96, 225, 817, 1108, 1333
BspFNI	CGCG	3 cut(s)	228, 384, 758
BspLI	GGNNCC	4 cut(s)	438, 596, 1009, 2217
BspMI	ACCTGC	2 cut(s)	1448, 1787
BspPI	GGATC	1 cut(s)	2039
BspQI	GCTCTTC	2 cut(s)	1313, 1497
BspT107I	GGYRCC	2 cut(s)	594, 2215
BspTI	CTTAAG	1 cut(s)	599
BspTNI	GGTCTC	1 cut(s)	355
BsrGI	TGTACA	1 cut(s)	2327
BsrI	ACTGG	4 cut(s)	471, 621, 1043, 1559
BssECI	CCNNGG	5 cut(s)	204, 1383, 1739, 2196, 2219
BssMI	GATC	4 cut(s)	7, 2044, 2275, 2287
BssNAI	GTATAC	1 cut(s)	1993
BssNI	GRCGYC	1 cut(s)	1001
BssSI	CACGAG	1 cut(s)	698
BssT1I	CCWWGG	1 cut(s)	204
Bst1107I	GTATAC	1 cut(s)	1993
Bst2BI	CACGAG	1 cut(s)	698
Bst2UI	CCWGG	2 cut(s)	1384, 1741
Bst4CI	ACNGT	1 cut(s)	1639
Bst6I	CTCTTC	3 cut(s)	787, 1313, 1497
BstACI	GRCGYC	1 cut(s)	1001
BstAFI	CTTAAG	1 cut(s)	599
BstAUI	TGTACA	1 cut(s)	2327
BstC8I	GCNNGC	3 cut(s)	226, 289, 386
BstDEI	CTNAG	8 cut(s)	51, 83, 212, 804, 1054, 1116, 1217, 1341
BstDSI	CCRYGG	1 cut(s)	2196
BstF5I	GGATG	9 cut(s)	718, 898, 940, 988, 1429, 2065, 2206, 2229, 2347
BstFNI	CGCG	3 cut(s)	228, 384, 758
BstHHI	GCGC	2 cut(s)	758, 1678
BstKTI	GATC	4 cut(s)	10, 2047, 2278, 2290
BstMAI	GTCTC	2 cut(s)	355, 462
BstMBI	GATC	4 cut(s)	7, 2044, 2275, 2287
BstMCI	CGRYCG	1 cut(s)	562
BstMWI	GCNNNNNNNGC	5 cut(s)	225, 269, 390, 1199, 1504
BstNI	CCWGG	2 cut(s)	1384, 1741
BstNSI	RCATGY	1 cut(s)	674
BstSCI	CCNGG	3 cut(s)	1382, 1739, 2218
BstSFI	CTRYAG	2 cut(s)	1239, 1680
BstUI	CGCG	3 cut(s)	228, 384, 758
BstV1I	GCAGC	3 cut(s)	425, 1817, 1820
BstX2I	RGATCY	1 cut(s)	7
BstYI	RGATCY	1 cut(s)	7
BstZ17I	GTATAC	1 cut(s)	1993
Bsu36I	CCTNAGG	1 cut(s)	804
BsuRI	GGCC	4 cut(s)	324, 437, 587, 1744
BtgI	CCRYGG	1 cut(s)	2196
BtgZI	GCGATG	1 cut(s)	244
BtsCI	GGATG	9 cut(s)	718, 898, 940, 988, 1429, 2065, 2206, 2229, 2347
BtsI	GCAGTG	2 cut(s)	1116, 1330
BtsIMutI	CAGTG	2 cut(s)	1116, 1330
BtuMI	TCGCGA	1 cut(s)	384
BveI	ACCTGC	2 cut(s)	1448, 1787
Cac8I	GCNNGC	3 cut(s)	226, 289, 386
CaiI	CAGNNNCTG	1 cut(s)	1115
CfoI	GCGC	2 cut(s)	758, 1678
Cfr13I	GGNCC	2 cut(s)	436, 1008
CseI	GACGC	1 cut(s)	866
Csp6I	GTAC	7 cut(s)	147, 595, 976, 1051, 1213, 2162, 2328
CspCI	CAANNNNNGTGG	2 cut(s)	2037, 2072
CviAII	CATG	8 cut(s)	671, 1132, 1138, 1301, 1913, 1936, 2285, 2296
CviQI	GTAC	7 cut(s)	147, 595, 976, 1051, 1213, 2162, 2328
DdeI	CTNAG	8 cut(s)	51, 83, 212, 804, 1054, 1116, 1217, 1341
DpnI	GATC	4 cut(s)	9, 2046, 2277, 2289
DpnII	GATC	4 cut(s)	7, 2044, 2275, 2287
DraI	TTTAAA	1 cut(s)	1309
DrdI	GACNNNNNNGTC	1 cut(s)	1006
DseDI	GACNNNNNNGTC	1 cut(s)	1006
EaeI	YGGCCR	1 cut(s)	585
Eam1104I	CTCTTC	3 cut(s)	787, 1313, 1497
EarI	CTCTTC	3 cut(s)	787, 1313, 1497
EciI	GGCGGA	1 cut(s)	317
Ecl136II	GAGCTC	1 cut(s)	388
Eco130I	CCWWGG	1 cut(s)	204
Eco24I	GRGCYC	1 cut(s)	390
Eco31I	GGTCTC	1 cut(s)	355
Eco32I	GATATC	1 cut(s)	1780
Eco47I	GGWCC	1 cut(s)	1008
Eco53kI	GAGCTC	1 cut(s)	388
Eco57I	CTGAAG	1 cut(s)	902
Eco81I	CCTNAGG	1 cut(s)	804
EcoICRI	GAGCTC	1 cut(s)	388
EcoRII	CCWGG	2 cut(s)	1382, 1739
EcoRV	GATATC	1 cut(s)	1780
EcoT14I	CCWWGG	1 cut(s)	204
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	1 cut(s)	204
FaeI	CATG	8 cut(s)	674, 1135, 1141, 1304, 1916, 1939, 2288, 2299
FalI	AAGNNNNNCTT	5 cut(s)	29, 671, 703, 1395, 1427
FaqI	GGGAC	1 cut(s)	1722
FatI	CATG	8 cut(s)	670, 1131, 1137, 1300, 1912, 1935, 2284, 2295
FauI	CCCGC	1 cut(s)	277
FauNDI	CATATG	1 cut(s)	1728
FbaI	TGATCA	1 cut(s)	2275
FblI	GTMKAC	3 cut(s)	1542, 1992, 2346
Fnu4HI	GCNGC	7 cut(s)	63, 217, 229, 414, 435, 1831, 1834
FokI	GGATG	8 cut(s)	725, 885, 947, 995, 1436, 2072, 2213, 2236
FriOI	GRGCYC	1 cut(s)	390
Fsp4HI	GCNGC	7 cut(s)	63, 217, 229, 414, 435, 1831, 1834
FspBI	CTAG	2 cut(s)	420, 1257
GlaI	GCGC	2 cut(s)	757, 1677
GluI	GCNGC	7 cut(s)	63, 217, 229, 414, 435, 1831, 1834
HaeIII	GGCC	4 cut(s)	324, 437, 587, 1744
HapII	CCGG	1 cut(s)	2219
HgaI	GACGC	1 cut(s)	866
HhaI	GCGC	2 cut(s)	758, 1678
Hin1I	GRCGYC	1 cut(s)	1001
Hin1II	CATG	8 cut(s)	674, 1135, 1141, 1304, 1916, 1939, 2288, 2299
Hin6I	GCGC	2 cut(s)	756, 1676
HinP1I	GCGC	2 cut(s)	756, 1676
HincII	GTYRAC	1 cut(s)	1020
HindII	GTYRAC	1 cut(s)	1020
HpaII	CCGG	1 cut(s)	2219
HphI	GGTGA	6 cut(s)	101, 229, 274, 292, 464, 772
Hpy166II	GTNNAC	6 cut(s)	149, 1020, 1543, 1719, 1993, 2347
Hpy8I	GTNNAC	6 cut(s)	149, 1020, 1543, 1719, 1993, 2347
HpyAV	CCTTC	4 cut(s)	347, 1052, 1170, 1219
HpyCH4III	ACNGT	1 cut(s)	1639
HpyCH4IV	ACGT	3 cut(s)	255, 545, 1001
HpyF10VI	GCNNNNNNNGC	5 cut(s)	225, 269, 390, 1199, 1504
HpyF3I	CTNAG	8 cut(s)	51, 83, 212, 804, 1054, 1116, 1217, 1341
HpySE526I	ACGT	3 cut(s)	255, 545, 1001
Hsp92I	GRCGYC	1 cut(s)	1001
Hsp92II	CATG	8 cut(s)	674, 1135, 1141, 1304, 1916, 1939, 2288, 2299
HspAI	GCGC	2 cut(s)	756, 1676
KpnI	GGTACC	1 cut(s)	598
Ksp22I	TGATCA	1 cut(s)	2275
Kzo9I	GATC	4 cut(s)	7, 2044, 2275, 2287
LguI	GCTCTTC	2 cut(s)	1313, 1497
LmnI	GCTCC	3 cut(s)	895, 1615, 2301
Lsp1109I	GCAGC	3 cut(s)	425, 1817, 1820
LweI	GCATC	7 cut(s)	60, 864, 907, 1504, 1663, 1762, 1899
MaeI	CTAG	2 cut(s)	420, 1257
MaeII	ACGT	3 cut(s)	255, 545, 1001
MaeIII	GTNAC	5 cut(s)	424, 541, 1600, 1864, 2132
MalI	GATC	4 cut(s)	9, 2046, 2277, 2289
MboI	GATC	4 cut(s)	7, 2044, 2275, 2287
MfeI	CAATTG	1 cut(s)	1493
MflI	RGATCY	1 cut(s)	7
MhlI	GDGCHC	2 cut(s)	390, 1204
MlyI	GAGTC	5 cut(s)	338, 464, 920, 1424, 1891
MmeI	TCCRAC	2 cut(s)	36, 189
MroXI	GAANNNNTTC	3 cut(s)	359, 401, 2258
MslI	CAYNNNNRTG	3 cut(s)	1136, 2130, 2283
MspA1I	CMGCKG	1 cut(s)	272
MspCI	CTTAAG	1 cut(s)	599
MspI	CCGG	1 cut(s)	2219
MspR9I	CCNGG	3 cut(s)	1384, 1741, 2220
MunI	CAATTG	1 cut(s)	1493
MvaI	CCWGG	2 cut(s)	1384, 1741
MvnI	CGCG	3 cut(s)	228, 384, 758
MwoI	GCNNNNNNNGC	5 cut(s)	225, 269, 390, 1199, 1504
NciI	CCSGG	1 cut(s)	2220
NdeI	CATATG	1 cut(s)	1728
NdeII	GATC	4 cut(s)	7, 2044, 2275, 2287
NlaIII	CATG	8 cut(s)	674, 1135, 1141, 1304, 1916, 1939, 2288, 2299
NlaIV	GGNNCC	4 cut(s)	438, 596, 1009, 2217
NmuCI	GTSAC	3 cut(s)	424, 541, 2132
NruI	TCGCGA	1 cut(s)	384
NspI	RCATGY	1 cut(s)	674
PaqCI	CACCTGC	1 cut(s)	1787
PciI	ACATGT	1 cut(s)	670
PciSI	GCTCTTC	2 cut(s)	1313, 1497
PdmI	GAANNNNTTC	3 cut(s)	359, 401, 2258
PfeI	GAWTC	6 cut(s)	188, 397, 889, 1357, 1916, 2185
PflFI	GACNNNGTC	1 cut(s)	347
PflMI	CCANNNNNTGG	1 cut(s)	627
PkrI	GCNGC	7 cut(s)	64, 218, 230, 415, 436, 1832, 1835
PleI	GAGTC	5 cut(s)	338, 463, 919, 1423, 1891
PpsI	GAGTC	5 cut(s)	338, 463, 919, 1423, 1891
PscI	ACATGT	1 cut(s)	670
PshBI	ATTAAT	1 cut(s)	2235
Psp124BI	GAGCTC	1 cut(s)	390
Psp6I	CCWGG	2 cut(s)	1382, 1739
PspGI	CCWGG	2 cut(s)	1382, 1739
PspN4I	GGNNCC	4 cut(s)	438, 596, 1009, 2217
PspPI	GGNCC	2 cut(s)	436, 1008
PstNI	CAGNNNCTG	1 cut(s)	1115
PsuI	RGATCY	1 cut(s)	7
PsyI	GACNNNGTC	1 cut(s)	347
RruI	TCGCGA	1 cut(s)	384
RsaI	GTAC	7 cut(s)	148, 596, 977, 1052, 1214, 2163, 2329
RsaNI	GTAC	7 cut(s)	147, 595, 976, 1051, 1213, 2162, 2328
RseI	CAYNNNNRTG	3 cut(s)	1136, 2130, 2283
SacI	GAGCTC	1 cut(s)	390
SapI	GCTCTTC	2 cut(s)	1313, 1497
SatI	GCNGC	7 cut(s)	63, 217, 229, 414, 435, 1831, 1834
Sau3AI	GATC	4 cut(s)	7, 2044, 2275, 2287
Sau96I	GGNCC	2 cut(s)	436, 1008
ScaI	AGTACT	1 cut(s)	1052
SchI	GAGTC	5 cut(s)	338, 464, 920, 1424, 1891
ScrFI	CCNGG	3 cut(s)	1384, 1741, 2220
SduI	GDGCHC	2 cut(s)	390, 1204
SfaNI	GCATC	7 cut(s)	60, 864, 907, 1504, 1663, 1762, 1899
SfcI	CTRYAG	2 cut(s)	1239, 1680
SinI	GGWCC	1 cut(s)	1008
SmiMI	CAYNNNNRTG	3 cut(s)	1136, 2130, 2283
SmlI	CTYRAG	3 cut(s)	599, 1412, 1876
SmoI	CTYRAG	3 cut(s)	599, 1412, 1876
SspMI	CTAG	2 cut(s)	420, 1257
SstI	GAGCTC	1 cut(s)	390
StyD4I	CCNGG	3 cut(s)	1382, 1739, 2218
StyI	CCWWGG	1 cut(s)	204
TaaI	ACNGT	1 cut(s)	1639
TaiI	ACGT	3 cut(s)	258, 548, 1004
TaqII	GACCGA	1 cut(s)	337
TatI	WGTACW	2 cut(s)	1050, 2327
TauI	GCSGC	4 cut(s)	65, 219, 231, 437
TfiI	GAWTC	6 cut(s)	188, 397, 889, 1357, 1916, 2185
TscAI	CASTG	2 cut(s)	1116, 1330
TseFI	GTSAC	3 cut(s)	424, 541, 2132
TseI	GCWGC	3 cut(s)	413, 1830, 1833
Tsp45I	GTSAC	3 cut(s)	424, 541, 2132
TspDTI	ATGAA	8 cut(s)	546, 848, 1091, 1120, 1301, 1407, 1929, 1952
TspGWI	ACGGA	1 cut(s)	462
TspRI	CASTG	2 cut(s)	1116, 1330
Tth111I	GACNNNGTC	1 cut(s)	347
Van91I	CCANNNNNTGG	1 cut(s)	627
Vha464I	CTTAAG	1 cut(s)	599
VpaK11BI	GGWCC	1 cut(s)	1008
VspI	ATTAAT	1 cut(s)	2235
XapI	RAATTY	3 cut(s)	233, 864, 905
XceI	RCATGY	1 cut(s)	674
XmiI	GTMKAC	3 cut(s)	1542, 1992, 2346
XmnI	GAANNNNTTC	3 cut(s)	359, 401, 2258
XspI	CTAG	2 cut(s)	420, 1257
ZraI	GACGTC	1 cut(s)	1002
ZrmI	AGTACT	1 cut(s)	1052

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.