RchiOBHm_Chr1g0316471

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0010078
Physical Location & Seq
Reverse (-)
3887001 .. 3891823
4823 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2469 bp
ATGGAAACACAAAACGACACCGCTTCATGGAGCTCTGCAACAAATTGGTCCGTCGCCGCTGGCTCTCTCGTAAATCGCGTCACCTTCGAGTCCTCCTTGTCCCCGATCGACGGCGACGCTCTAAATTCCCCCGCCGGATCCCCCCTTATTCTTCACCCTCCGTCGCCGGATTCTGGACCTTGCGAGATCACCATTAATTTCACACAAAAACATGAGGTCCAGCAAATTTATGTTCGGAGTACTGCCCGAATCTATGAGATATACTATGCACCTGATTTGCAGAGTGACAACGAATATCTATGTACTGTTCGCTGCGGAATTGCTGCCAGAGATGAAGAAGTGCTTCACACAGCTGATAATGAAGAAGTTCGTTCGGCAAATTCAAATGGGTCTCCTAAGGACATATCTGAAGAAAACCTAAGAAATGGCAATAACTTGAGCACCAGTGAAGATGACTGGGTTGAAGTGAAAGTCCCAGATGGTCATGCGGTTGATAAAAAAATCAGCTCCTTGCCATTCAAGTTCGGTTCTGAACAGGCTCTATATGAAGCTACAGCACAGATGAGTGATGTAAATCCTTGTATATCTCTAACACTTCGTCTACTGTCACTTGAGAGGAAAGATTGTGTTTATGTTGATGAAATCTATGTGTTTGCTGATCCTGCTGATTCGGTGGATTTGGAAAACCAAGCGAGTACAGCGGAAAGCTCAGCTGGAAGCTCTCTCATGGCCATGTTTATGCCTACCCTCTTGCAATTATCTAAAACAAGGAGTGTTAACCCAACCCAACAAGACTCCCAAAAGATTGGTTCAAAAGCATCTGATTCTACCAGTGTTGCAACTAAGATCCAGACAGATATTAAACCCAGCATATCCGATCATCAAGAAGTAAAGTTTCTGGATGTGAGTAGGGATACATTTTGTAGCACCCAATCACAGATCCCTCTAGAGGTTCCTGTTACAGAAAGCAAATCTGATACTGCATATCAGCATGTTGAAAGATCTATGGACCTGCTTTTTTCTCGAATGGGCAGAATAGAGGATTTATTATTGAGGTTTGAAGACAAAATGGTAAAGCCCATAAGCAGCATTGAGGCAAGGCTTGAGAGGGTAGAGCAGCAACTTGAAGTACTCAGCAAACAATCACAGAATTCTGGATTATCAACATGCTCAAGATTCTGTGCTCCTTCTTTCTCATGCGTTGAGTCTGATTCCAACTCTTTCTACAACAGTGGAAATGACTATCCCAGTTGTGAGGCAGTTATATTAGGTAACAAGGATGCTCAATTTGAGGCACTCCCTACCACACCTTATGACATGTCTGATTCAGGAAATCCTTCAAAGTTGGTCCCAGGTCTAGTGGTAACTGCTCCTGAATTTTCAAGTGATGATGAGGAGGAGGAAGAGGATCAGTCATCAAGTCTAGTGATACATCCTTCAAAGAATACACCAAGGCCTGCTTTGACAATTGATTATGCCCTAGCATCTGCACTAGCTGGGTTTATGTCTCTGACTTCTACTCAGCCTCAGAAGTGTACTCAAACTTTTTCAGTTGAAGCTCCTGAGTTCTTAAATGAAGAAGATGGTAGCCCTGACACAAAAGCTTCAGCAAGAGTTGAAGAAATAGGGACAGAGCCATCCATGTGCTTTGGTGAATCTGATGGGATACAAAATGTGAAAGATTCACTTGCTGATTCATCCAGAATTTCTTCATATAGTGAGGAGAATGTTGAAAGATCTAATGATGAGCACTCTGTTAAACCAGACGGAATTCATGTGCAGCACGAGTGTCATGAGGGCGGTGAAGAAGACAAACCTGATGGTAAGAGCGGTGAGAATGCAGTTGATCTGGCTAATCATGGCATGGCTCGAACTGATTTTTGTCAGATAACAGAAGAGATTGAGAATGGAGTAGTCATCACTGAGATGAGCAACATTGCCAACCCTGATAAAACTGATATTCCAAACGGGGTGCCTCAAAATGAGACTGATGATGGATTTAATAACACTCAGGATGATGCTAATACAAAGGAAGTGACAGAAGAGAATTCTGACAGATGTGCGAAGGAAGTGACAGAAGAGAATTCTGACAAAGATGTTTTGAAGAATATCCTTGAATTCTCACGTGCTTCTTCTGTGGTGGATTTTGAAATTCCAGTGTTGGATGTGAAATTTACTTCTCTTGAAAGTTGCAGTGCCACTTGTTCTCTTGCAGCCCTTTTGTCTGAATCGCCGGAATCAATGACTGAAGCACCTTGTGTGAGGCAAAGTGATGATGTGCCCCCGGTTGGTGAGGAGTCTAGCTTGATTTTGGTGGAAGATCGGGAGCCGGTTGGTCCTGCTCCTGATGGTAATTTTTCTGTGGATATGGATTACTATAGTGTAGCAGAACCTTTGAGCACATGGGATGCGAATCTGCAGTGTGAAACATCCAATAGCCATGAGACTTTTGCTGCAAGTCTCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

822

Amino Acids

89.7

Weight (kDa)

4.25

Isoelectric Point (pI)

54.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G47940
fragaria_vesca FvH4_5g06191 FvH4_7g01170 FvH4_7g01170 FvH4_7g01170
malus_domestica MD00G1112200.v1.1 MD02G1309200.v1.1 MD07G1012500.v1.1
prunus_persica Prupe.2G015000_v2.0.a1
pyrus_communis pycom02g26050 pycom07g01030
rosa_chinensis RchiOBHm_Chr1g0316471
rosa_laevigata RLG00000030670
rosa_multiflora Rmu_sc0006790.1_g000005
rosa_roxburghii Rroxscaffold_4G00330970
rosa_rugosa Rorug01G0011100
rosa_samantha Rh1AG020600 Rh1BG015900 Rh1CG018900 Rh1DG016000
rosa_wichuraiana Rw1G001350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1020
AccB1I GGYRCC 1 cut(s) 1972
AccBSI CCGCTC 1 cut(s) 1830
AccI GTMKAC 1 cut(s) 601
AccII CGCG 1 cut(s) 78
AciI CCGC 8 cut(s) 21, 57, 132, 315, 488, 701, 1800, 1830
AclWI GGATC 6 cut(s) 132, 145, 653, 841, 934, 1416
AcoI YGGCCR 1 cut(s) 729
AcuI CTGAAG 3 cut(s) 429, 1590, 2268
AcvI CACGTG 1 cut(s) 2126
AdeI CACNNNGTG 1 cut(s) 2258
AfaI GTAC 5 cut(s) 241, 304, 697, 1131, 1537
AfiI CCNNNNNNNGG 5 cut(s) 27, 110, 173, 949, 2288
AflIII ACRYGT 1 cut(s) 1317
AjnI CCWGG 1 cut(s) 1351
Alw21I GWGCWC 5 cut(s) 35, 443, 1186, 1752, 2402
Alw26I GTCTC 5 cut(s) 396, 1512, 1979, 2438, 2465
AlwI GGATC 6 cut(s) 132, 145, 653, 841, 934, 1416
AoxI GGCC 2 cut(s) 729, 1454
ApeKI GCWGC 7 cut(s) 312, 323, 1086, 1117, 1780, 2213, 2453
AseI ATTAAT 1 cut(s) 195
Asp700I GAANNNNTTC 4 cut(s) 342, 366, 1336, 1708
AspS9I GGNCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
AsuC2I CCSGG 1 cut(s) 2285
AsuHPI GGTGA 7 cut(s) 73, 146, 181, 1664, 1814, 1844, 2303
AvaII GGWCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
AxyI CCTNAGG 1 cut(s) 396
BaeGI GKGCMC 1 cut(s) 2283
BalI TGGCCA 1 cut(s) 731
BamHI GGATCC 1 cut(s) 137
BanI GGYRCC 1 cut(s) 1972
BanII GRGCYC 1 cut(s) 35
BauI CACGAG 1 cut(s) 1784
BbrPI CACGTG 1 cut(s) 2126
BbsI GAAGAC 2 cut(s) 1068, 1815
Bbv12I GWGCWC 5 cut(s) 35, 443, 1186, 1752, 2402
BbvI GCAGC 7 cut(s) 299, 310, 1098, 1129, 1792, 2225, 2440
BccI CCATC 7 cut(s) 473, 1577, 1645, 1655, 1814, 1988, 2342
BceAI ACGGC 1 cut(s) 127
BciT130I CCWGG 1 cut(s) 1353
BciVI GTATCC 2 cut(s) 907, 1659
BcnI CCSGG 1 cut(s) 2285
BcoDI GTCTC 5 cut(s) 396, 1512, 1979, 2438, 2465
BfaI CTAG 6 cut(s) 947, 1358, 1424, 1481, 1493, 2301
BfmI CTRYAG 3 cut(s) 552, 2377, 2417
BfuAI ACCTGC 1 cut(s) 1020
BfuI GTATCC 2 cut(s) 907, 1659
BglII AGATCT 2 cut(s) 1001, 1736
BisI GCNGC 8 cut(s) 57, 313, 324, 1087, 1118, 1781, 2214, 2454
BlpI GCTNAGC 1 cut(s) 709
BlsI GCNGC 8 cut(s) 58, 314, 325, 1088, 1119, 1782, 2215, 2455
BmcAI AGTACT 2 cut(s) 241, 1131
Bme1390I CCNGG 2 cut(s) 1353, 2285
Bme18I GGWCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
BmgT120I GGNCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
BmiI GGNNCC 5 cut(s) 139, 954, 1350, 1974, 2328
BmrFI CCNGG 2 cut(s) 1353, 2285
BmrI ACTGGG 2 cut(s) 466, 1242
BmsI GCATC 5 cut(s) 827, 1270, 1493, 2008, 2398
BmuI ACTGGG 2 cut(s) 466, 1242
BpiI GAAGAC 2 cut(s) 1068, 1815
Bpu1102I GCTNAGC 1 cut(s) 709
BpuEI CTTGAG 4 cut(s) 457, 632, 1124, 1156
BpuMI CCSGG 1 cut(s) 2285
BsaAI YACGTR 1 cut(s) 2126
BsaBI GATNNNNATC 2 cut(s) 573, 2412
BsaI GGTCTC 1 cut(s) 396
BsaJI CCNNGG 3 cut(s) 1351, 1451, 2283
Bsc4I CCNNNNNNNGG 5 cut(s) 27, 110, 173, 949, 2288
Bse118I RCCGGY 1 cut(s) 2329
Bse1I ACTGG 5 cut(s) 444, 461, 831, 1248, 2156
Bse21I CCTNAGG 1 cut(s) 396
Bse3DI GCAATG 1 cut(s) 1935
Bse8I GATNNNNATC 2 cut(s) 573, 2412
BseBI CCWGG 1 cut(s) 1353
BseDI CCNNGG 3 cut(s) 1351, 1451, 2283
BseGI GGATG 9 cut(s) 907, 1285, 1432, 1637, 1697, 2020, 2170, 2413, 2429
BseJI GATNNNNATC 2 cut(s) 573, 2412
BseLI CCNNNNNNNGG 5 cut(s) 27, 110, 173, 949, 2288
BseMI GCAATG 1 cut(s) 1935
BseMII CTCAG 7 cut(s) 723, 1147, 1535, 1541, 1554, 1914, 2024
BseNI ACTGG 5 cut(s) 444, 461, 831, 1248, 2156
BseRI GAGGAG 4 cut(s) 1409, 1412, 1736, 2309
BseSI GKGCMC 1 cut(s) 2283
BseXI GCAGC 7 cut(s) 299, 310, 1098, 1129, 1792, 2225, 2440
BseYI CCCAGC 2 cut(s) 866, 1496
BsgI GTGCAG 2 cut(s) 1473, 1799
Bsh1236I CGCG 1 cut(s) 78
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 2 cut(s) 731, 1456
BshNI GGYRCC 1 cut(s) 1972
BsiEI CGRYCG 1 cut(s) 108
BsiHKAI GWGCWC 5 cut(s) 35, 443, 1186, 1752, 2402
BsiSI CCGG 5 cut(s) 135, 167, 2234, 2285, 2330
BslFI GGGAC 4 cut(s) 85, 458, 1334, 1642
BslI CCNNNNNNNGG 5 cut(s) 27, 110, 173, 949, 2288
BsmAI GTCTC 5 cut(s) 396, 1512, 1979, 2438, 2465
BsmFI GGGAC 4 cut(s) 85, 458, 1334, 1642
BsmI GAATGC 1 cut(s) 1843
BsnI GGCC 2 cut(s) 731, 1456
Bso31I GGTCTC 1 cut(s) 396
Bsp1286I GDGCHC 6 cut(s) 35, 443, 1186, 1752, 2283, 2402
Bsp1720I GCTNAGC 1 cut(s) 709
BspACI CCGC 8 cut(s) 21, 57, 132, 315, 488, 701, 1800, 1830
BspANI GGCC 2 cut(s) 731, 1456
BspCNI CTCAG 7 cut(s) 722, 1146, 1534, 1540, 1555, 1915, 2023
BspFNI CGCG 1 cut(s) 78
BspHI TCATGA 1 cut(s) 1792
BspLI GGNNCC 5 cut(s) 139, 954, 1350, 1974, 2328
BspMAI CTGCAG 1 cut(s) 2421
BspMI ACCTGC 1 cut(s) 1020
BspPI GGATC 6 cut(s) 132, 145, 653, 841, 934, 1416
BspT107I GGYRCC 1 cut(s) 1972
BspTNI GGTCTC 1 cut(s) 396
BsrBI CCGCTC 1 cut(s) 1830
BsrDI GCAATG 1 cut(s) 1935
BsrFI RCCGGY 1 cut(s) 2329
BsrI ACTGG 5 cut(s) 444, 461, 831, 1248, 2156
BssAI RCCGGY 1 cut(s) 2329
BssECI CCNNGG 3 cut(s) 1351, 1451, 2283
BssSI CACGAG 1 cut(s) 1784
BssT1I CCWWGG 1 cut(s) 1451
Bst2BI CACGAG 1 cut(s) 1784
Bst2UI CCWGG 1 cut(s) 1353
Bst4CI ACNGT 3 cut(s) 307, 606, 1232
Bst6I CTCTTC 4 cut(s) 1398, 1890, 2037, 2073
BstBAI YACGTR 1 cut(s) 2126
BstC8I GCNNGC 2 cut(s) 61, 1458
BstF5I GGATG 9 cut(s) 907, 1285, 1432, 1637, 1697, 2020, 2170, 2413, 2429
BstFNI CGCG 1 cut(s) 78
BstMAI GTCTC 5 cut(s) 396, 1512, 1979, 2438, 2465
BstMCI CGRYCG 1 cut(s) 108
BstMWI GCNNNNNNNGC 2 cut(s) 662, 698
BstNI CCWGG 1 cut(s) 1353
BstNSI RCATGY 3 cut(s) 995, 1170, 1321
BstSCI CCNGG 2 cut(s) 1351, 2283
BstSFI CTRYAG 3 cut(s) 552, 2377, 2417
BstSLI GKGCMC 1 cut(s) 2283
BstUI CGCG 1 cut(s) 78
BstV1I GCAGC 7 cut(s) 299, 310, 1098, 1129, 1792, 2225, 2440
BstV2I GAAGAC 2 cut(s) 1068, 1815
BstX2I RGATCY 5 cut(s) 137, 846, 939, 1001, 1736
BstXI CCANNNNNNTGG 1 cut(s) 806
BstYI RGATCY 5 cut(s) 137, 846, 939, 1001, 1736
Bsu36I CCTNAGG 1 cut(s) 396
BsuI GTATCC 2 cut(s) 907, 1659
BsuRI GGCC 2 cut(s) 731, 1456
BtsCI GGATG 9 cut(s) 907, 1285, 1432, 1637, 1697, 2020, 2170, 2413, 2429
BtsI GCAGTG 2 cut(s) 2200, 2426
BtsIMutI CAGTG 7 cut(s) 451, 838, 1237, 1920, 2163, 2200, 2426
BveI ACCTGC 1 cut(s) 1020
Cac8I GCNNGC 2 cut(s) 61, 1458
CciI TCATGA 1 cut(s) 1792
Cfr10I RCCGGY 1 cut(s) 2329
Cfr13I GGNCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
CseI GACGC 2 cut(s) 67, 125
Csp6I GTAC 5 cut(s) 240, 303, 696, 1130, 1536
CviQI GTAC 5 cut(s) 240, 303, 696, 1130, 1536
DraIII CACNNNGTG 1 cut(s) 2258
EaeI YGGCCR 1 cut(s) 729
Eam1104I CTCTTC 4 cut(s) 1398, 1890, 2037, 2073
EarI CTCTTC 4 cut(s) 1398, 1890, 2037, 2073
Ecl136II GAGCTC 1 cut(s) 33
Eco130I CCWWGG 1 cut(s) 1451
Eco147I AGGCCT 1 cut(s) 1456
Eco24I GRGCYC 1 cut(s) 35
Eco31I GGTCTC 1 cut(s) 396
Eco47I GGWCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
Eco53kI GAGCTC 1 cut(s) 33
Eco57I CTGAAG 3 cut(s) 429, 1590, 2268
Eco72I CACGTG 1 cut(s) 2126
Eco81I CCTNAGG 1 cut(s) 396
EcoICRI GAGCTC 1 cut(s) 33
EcoRI GAATTC 5 cut(s) 1150, 1770, 2047, 2083, 2117
EcoRII CCWGG 1 cut(s) 1351
EcoT14I CCWWGG 1 cut(s) 1451
EcoT38I GRGCYC 1 cut(s) 35
ErhI CCWWGG 1 cut(s) 1451
FalI AAGNNNNNCTT 6 cut(s) 327, 359, 1444, 1476, 1671, 1703
FaqI GGGAC 4 cut(s) 85, 458, 1334, 1642
FauI CCCGC 1 cut(s) 139
FblI GTMKAC 1 cut(s) 601
Fnu4HI GCNGC 8 cut(s) 57, 313, 324, 1087, 1118, 1781, 2214, 2454
FokI GGATG 9 cut(s) 914, 1292, 1419, 1624, 1684, 2027, 2177, 2416, 2420
FriOI GRGCYC 1 cut(s) 35
Fsp4HI GCNGC 8 cut(s) 57, 313, 324, 1087, 1118, 1781, 2214, 2454
FspBI CTAG 6 cut(s) 947, 1358, 1424, 1481, 1493, 2301
GluI GCNGC 8 cut(s) 57, 313, 324, 1087, 1118, 1781, 2214, 2454
GsaI CCCAGC 2 cut(s) 870, 1500
HaeIII GGCC 2 cut(s) 731, 1456
HapII CCGG 5 cut(s) 135, 167, 2234, 2285, 2330
HgaI GACGC 2 cut(s) 67, 125
HincII GTYRAC 1 cut(s) 778
HindII GTYRAC 1 cut(s) 778
HindIII AAGCTT 1 cut(s) 1602
HpaI GTTAAC 1 cut(s) 778
HpaII CCGG 5 cut(s) 135, 167, 2234, 2285, 2330
HphI GGTGA 7 cut(s) 73, 146, 181, 1664, 1814, 1844, 2303
Hpy166II GTNNAC 3 cut(s) 602, 778, 1536
Hpy8I GTNNAC 3 cut(s) 602, 778, 1536
Hpy99I CGWCG 4 cut(s) 56, 113, 119, 166
HpyAV CCTTC 5 cut(s) 94, 1197, 1347, 1446, 2059
HpyCH4III ACNGT 3 cut(s) 307, 606, 1232
HpyCH4IV ACGT 1 cut(s) 2125
HpyF10VI GCNNNNNNNGC 2 cut(s) 662, 698
HpySE526I ACGT 1 cut(s) 2125
KspAI GTTAAC 1 cut(s) 778
LmnI GCTCC 7 cut(s) 30, 512, 1189, 1375, 1564, 2326, 2347
Lsp1109I GCAGC 7 cut(s) 299, 310, 1098, 1129, 1792, 2225, 2440
LweI GCATC 5 cut(s) 827, 1270, 1493, 2008, 2398
MaeI CTAG 6 cut(s) 947, 1358, 1424, 1481, 1493, 2301
MaeII ACGT 1 cut(s) 2125
MaeIII GTNAC 8 cut(s) 79, 284, 606, 958, 1271, 1363, 2035, 2071
MbiI CCGCTC 1 cut(s) 1830
MfeI CAATTG 1 cut(s) 1467
MflI RGATCY 5 cut(s) 137, 846, 939, 1001, 1736
MhlI GDGCHC 6 cut(s) 35, 443, 1186, 1752, 2283, 2402
MlsI TGGCCA 1 cut(s) 731
MluNI TGGCCA 1 cut(s) 731
MlyI GAGTC 4 cut(s) 98, 788, 1214, 2306
MmeI TCCRAC 2 cut(s) 1239, 2142
Mox20I TGGCCA 1 cut(s) 731
MroXI GAANNNNTTC 4 cut(s) 342, 366, 1336, 1708
MscI TGGCCA 1 cut(s) 731
MseI TTAA 6 cut(s) 195, 777, 861, 1571, 1758, 2001
MslI CAYNNNNRTG 4 cut(s) 731, 737, 1642, 1925
Msp20I TGGCCA 1 cut(s) 731
MspA1I CMGCKG 4 cut(s) 59, 353, 701, 713
MspI CCGG 5 cut(s) 135, 167, 2234, 2285, 2330
MspR9I CCNGG 2 cut(s) 1353, 2285
MunI CAATTG 1 cut(s) 1467
Mva1269I GAATGC 1 cut(s) 1843
MvaI CCWGG 1 cut(s) 1353
MvnI CGCG 1 cut(s) 78
MwoI GCNNNNNNNGC 2 cut(s) 662, 698
NciI CCSGG 1 cut(s) 2285
NlaIV GGNNCC 5 cut(s) 139, 954, 1350, 1974, 2328
NmuCI GTSAC 5 cut(s) 79, 284, 606, 2035, 2071
NspI RCATGY 3 cut(s) 995, 1170, 1321
PagI TCATGA 1 cut(s) 1792
PceI AGGCCT 1 cut(s) 1456
PciI ACATGT 1 cut(s) 1317
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PctI GAATGC 1 cut(s) 1843
PdmI GAANNNNTTC 4 cut(s) 342, 366, 1336, 1708
PkrI GCNGC 8 cut(s) 58, 314, 325, 1088, 1119, 1782, 2215, 2455
Ple19I CGATCG 1 cut(s) 108
PleI GAGTC 4 cut(s) 97, 788, 1213, 2305
PmaCI CACGTG 1 cut(s) 2126
PmlI CACGTG 1 cut(s) 2126
PpsI GAGTC 4 cut(s) 97, 788, 1213, 2305
Ppu21I YACGTR 1 cut(s) 2126
PscI ACATGT 1 cut(s) 1317
PshBI ATTAAT 1 cut(s) 195
Psp124BI GAGCTC 1 cut(s) 35
Psp6I CCWGG 1 cut(s) 1351
PspCI CACGTG 1 cut(s) 2126
PspFI CCCAGC 2 cut(s) 866, 1496
PspGI CCWGG 1 cut(s) 1351
PspN4I GGNNCC 5 cut(s) 139, 954, 1350, 1974, 2328
PspPI GGNCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
PstI CTGCAG 1 cut(s) 2421
PsuI RGATCY 5 cut(s) 137, 846, 939, 1001, 1736
PvuI CGATCG 1 cut(s) 108
PvuII CAGCTG 2 cut(s) 353, 713
RsaI GTAC 5 cut(s) 241, 304, 697, 1131, 1537
RsaNI GTAC 5 cut(s) 240, 303, 696, 1130, 1536
RseI CAYNNNNRTG 4 cut(s) 731, 737, 1642, 1925
SacI GAGCTC 1 cut(s) 35
SaqAI TTAA 6 cut(s) 195, 777, 861, 1571, 1758, 2001
SatI GCNGC 8 cut(s) 57, 313, 324, 1087, 1118, 1781, 2214, 2454
Sau96I GGNCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
ScaI AGTACT 2 cut(s) 241, 1131
SchI GAGTC 4 cut(s) 98, 788, 1214, 2306
ScrFI CCNGG 2 cut(s) 1353, 2285
SduI GDGCHC 6 cut(s) 35, 443, 1186, 1752, 2283, 2402
SfaNI GCATC 5 cut(s) 827, 1270, 1493, 2008, 2398
SfcI CTRYAG 3 cut(s) 552, 2377, 2417
SinI GGWCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
SmiMI CAYNNNNRTG 4 cut(s) 731, 737, 1642, 1925
SmlI CTYRAG 4 cut(s) 436, 611, 1103, 1171
SmoI CTYRAG 4 cut(s) 436, 611, 1103, 1171
SseBI AGGCCT 1 cut(s) 1456
SsiI CCGC 8 cut(s) 21, 57, 132, 315, 488, 701, 1800, 1830
SspMI CTAG 6 cut(s) 947, 1358, 1424, 1481, 1493, 2301
SstI GAGCTC 1 cut(s) 35
StuI AGGCCT 1 cut(s) 1456
StyD4I CCNGG 2 cut(s) 1351, 2283
StyI CCWWGG 1 cut(s) 1451
TaaI ACNGT 3 cut(s) 307, 606, 1232
TaiI ACGT 1 cut(s) 2128
TaqI TCGA 4 cut(s) 87, 108, 1024, 1870
TatI WGTACW 5 cut(s) 239, 302, 695, 1129, 1535
TauI GCSGC 1 cut(s) 59
Tru1I TTAA 6 cut(s) 195, 777, 861, 1571, 1758, 2001
Tru9I TTAA 6 cut(s) 195, 777, 861, 1571, 1758, 2001
TscAI CASTG 7 cut(s) 451, 838, 1237, 1927, 2163, 2200, 2426
TseFI GTSAC 5 cut(s) 79, 284, 606, 2035, 2071
TseI GCWGC 7 cut(s) 312, 323, 1086, 1117, 1780, 2213, 2453
Tsp45I GTSAC 5 cut(s) 79, 284, 606, 2035, 2071
TspDTI ATGAA 9 cut(s) 15, 348, 375, 561, 654, 1590, 1686, 1701, 1763
TspGWI ACGGA 3 cut(s) 40, 150, 1782
TspRI CASTG 7 cut(s) 451, 838, 1237, 1927, 2163, 2200, 2426
VpaK11BI GGWCC 6 cut(s) 48, 176, 217, 1009, 1348, 2336
VspI ATTAAT 1 cut(s) 195
XbaI TCTAGA 1 cut(s) 946
XceI RCATGY 3 cut(s) 995, 1170, 1321
XmiI GTMKAC 1 cut(s) 601
XmnI GAANNNNTTC 4 cut(s) 342, 366, 1336, 1708
XspI CTAG 6 cut(s) 947, 1358, 1424, 1481, 1493, 2301
ZrmI AGTACT 2 cut(s) 241, 1131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.