Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001960

Physical Location & Seq

Genomic Coordinates Forward (+)

61969812 .. 61972512

Gene Structure 2701 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGAATGAGGGTAAAGCGCTTGTGAGTAAGTTATCCGAGCTTAGCATGTGGAACATTCTCATTTGGGGCAATTGCTGCAACTGCATAGGGCCTGATTATGCAAAACAACTTGATGAATTGAATATTTTTCTTTGGAGTCTGGTAGAATCACTACGGCTGGAGCAAATGAGGAATGTAACCGAGCTCGTATGTTTGGCAAGACACTTCAAAGACAGACAAGATGATATGGAGAAAAGACAAGCTGAAATGGAGAAAAAAGTAGATGGTATATTGAGGGGGCAGCAGGAAGTCTATGATATATTGATAAAGCAGCAAGAGACAATACAGAGACTTGTTCCTAATAGCATGCAACAAGCTCCATCATCAAGCGGAGTAGGGGCTGCTGATCCTGCTCTAGGAGTAGTATTCCGACAGTTGGTTGATGCTGTCATACAAGTGAAAATCGAGAACATGATGTTTAAATGCCTCCTCGACACATTCAAATCCACACTCTACTGCTTACAACCACTGATAGAAGAGGTAGCCGAACATGGCAGGGTAGTGCATCTTCCAGAGCAAGAAGTGGAAAAGCTTATTATACAAATAGTGAATGGTGTGGAGCTTGTTCACAAATGCTCCAAGGTTCGTAAGCATGCCAACTACAAAAAGTATAAATTCCCTAACAAAATTTTCAATTTGGAGGAATATCTTTTCAGGCTCTTCATTGAACTCAAAGGGCAGGTAGAAAGGAATATGAAGGAGGCCATTGATTCTGCAAACAACATAGAGATGGCGATCAAGAAAATTGAAGATGAAGATTTATGTGACGTGCAGCTGCCTGAACTTCTTTCAACTGCAGTTGGATTTGATATGCTCAATATGCAGGGACTAAGAGATGTGACTGAGGAGGCTTTGTTGGACTCGGCAAGTGTCAAAGATGAGGGAGTCAAGCAAACTGAAGGTTTATCTGACGTGCTGCCTGAACTTCTTTCACCTGCAGATGGATTGGATGTACTGAATATGCAGGGATCATTGGATCTTATTACCGCAAATATCCAAGTGGTGGTCACAGAATCGGAAGAAATAGAGGCCATTGATAATTCAACAAGGAATGTGCAGGAAGAAGAAAAAGTAGAGCTGGGGCACTCAACGCCTTCTTCTCACCATAATCCCCAATTCAACAGCATGTTGGAGGGTCCTTCCTATCTTGTTTCAAAGCAGCTTCCGAGCTCCTGTGAGCAAGAGAGTCGGTGGATGTACAACACTGAACGTGTTCTTGATTTCTCGAACAGTAAGCGCCCACTTGAAGATGGGGAAGAGATGGCATTGATGAAGGTATGCAAGCACGCAGATGCTGTTGACAGAGTGGAAGCAGTGATGGATAATCTTGCTCTTTCCCATGCCAACTCTGACCAGCCAAATGACCAGAATCATGAGGGGAAAAAATATGATCCGGCTTCACTATTCCACCAACTAGGAAGGGACGTCTCAGTAGACTGTCTCGTTCGTTGTTCTAGGGCTGATTACGGCTCAGTTGCCATGCTGTGTAGGAGTTTCCATTCTCTAATTCGGAGTGGAGAGCTGTACACTCTGAGGCGGAAAATGGGTATTGTAGAACATTGGGCTTACTTCTCTTGTGCTCTCTCTGAATGGTGGGCATTTAATCCAGATCGTGGACGTTGGATGCCTTTGCCTAAAATAGAATCAAATGAAAGTTTCATGTATTCAGATAAGGAGTCTTTAGCCGTTGGCACCGAACTTCTTGTATTTGGAAAGGAAATAATGTCCCATGTGTGTTACAAATACAGCCTTTTGACACACAGGTGGTCATCCGGCCGTTTGATGAATACACCTAGGTTCTTGTTCGCTTCCGCTAGCAGTGGGGAAATTGCCATTGTAGCTGGCGGTTGCGATCTATGTGGCAATATCTTGAGCACTGCTGAGCTCTACAATTCAGAAACAGGAACTTGGTTGACTCTTCCGAGCATGCATGAACCTAGAAGAATGTGTTCTGGGGTATTTATGGATGGGAAGTTTTATGTCATTGGCGGGATTGGTGGCAGCTCAGCTGGGGAGGTTTATGATTTGGAGAGGGGGACTTGGACTGAGATACCTAACATGCACCCTAGAAAAAAGAAAGGGGCTGGAGCAACTGATGTGCCTGCTATAGCTGGGTCACCTCCTCTGGTTGCAGTTGTAAATAACATACTGTATGCTGCAGATTGGGGAAAACTGGAGGTAAGAAAATATGATAAGGAGAGGAACGTGTGGGTTACTATTGGGGGATTGCCTGAGCGGACATACTCAATTAATGGTTGGGGAGTAGCATTTCGGGCATGTGGTAATCGGTTAATTATAATCGGTGGACGTAGGGGTTCAAGCGTAGAGCAAATTGGAGTAGAGCAAATTGAAGTCAATTCTTGGGTCCCTGATGAAGGTCCGCCGCAGTGGAACCTGCTCGCTATAAGGGAAGATTTGCGAGGCTTTGTCTATAATTGTTCAGTGATGGGATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Kelch_1

Protein Analysis

831

Amino Acids

93.41

Weight (kDa)

5.18

Isoelectric Point (pI)

51.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	130 - 260	2.6e-22	Arabidopsis broad-spectrum mildew resistance protein RPW8
Kelch_KLHDC2_KLHL20_DRC7	PF24681	541 - 703	2e-06	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_FKB95	PF25210	559 - 783	2.7e-16	FKB95, Kelch-repeats domain
Beta-prop_Calicin	PF13964	588 - 701	2e-07	Calicin, beta-propeller domain
Kelch_1	PF01344	611 - 656	2.5e-07	Kelch motif
Kelch_1	PF01344	659 - 700	2.3e-09	Kelch motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74510 AT1G74510 AT1G74510
fragaria_vesca	FvH4_5g15231 FvH4_5g15231
malus_domestica	MD14G1197300.v1.1
prunus_persica	Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1
pyrus_communis	pycom06g16900 pycom14g16390
rosa_chinensis	RchiOBHm_Chr1g0373971 RchiOBHm_Chr1g0373981 RchiOBHm_Chr7g0180901
rosa_laevigata	RLG00000005225 RLG00000026789 RLG00000026790
rosa_multiflora	Rmu_sc0002740.1_g000003 Rmu_sc0004056.1_g000009 Rmu_sc0005304.1_g000003 Rmu_sc0006924.1_g000003
rosa_roxburghii	Rroxscaffold_3G00272420 Rroxscaffold_4G00283850
rosa_rugosa	Rorug06G0437100 Rorug06G0437100 Rorug06G0437100 Rorug06G0437100 Rorug06G0437200.1 Rorug06G0437300 Rorug06G0437400 Rorug06G0437500 Rorug06G0437600 Rorug06G0437700
rosa_samantha	Rh7AG038800 Rh7BG038300 Rh7CG039900 Rh7DG038400
rosa_wichuraiana	Rw1G034480 Rw7G003180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2336
AarI	CACCTGC	1 cut(s)	982
AatII	GACGTC	1 cut(s)	1467
Acc36I	ACCTGC	3 cut(s)	709, 982, 2442
AccB1I	GGYRCC	1 cut(s)	1730
AccB7I	CCANNNNNTGG	2 cut(s)	1042, 1652
AccBSI	CCGCTC	1 cut(s)	2275
AccI	GTMKAC	1 cut(s)	1473
AciI	CCGC	9 cut(s)	369, 1026, 1576, 1851, 1884, 2028, 2275, 2420, 2423
AclWI	GGATC	4 cut(s)	380, 1015, 1023, 1424
AcoI	YGGCCR	1 cut(s)	1813
AcsI	RAATTY	2 cut(s)	653, 666
AcuI	CTGAAG	1 cut(s)	957
AcyI	GRCGYC	1 cut(s)	1464
AfaI	GTAC	3 cut(s)	993, 1238, 1565
AfeI	AGCGCT	1 cut(s)	18
AfiI	CCNNNNNNNGG	6 cut(s)	395, 415, 980, 1042, 1652, 2414
AflIII	ACRYGT	2 cut(s)	1249, 2244
AjiI	CACGTC	2 cut(s)	808, 952
AleI	CACNNNNGTG	1 cut(s)	1801
Alw21I	GWGCWC	5 cut(s)	186, 1211, 1621, 1916, 1926
Alw26I	GTCTC	4 cut(s)	311, 322, 1471, 1484
AlwI	GGATC	4 cut(s)	380, 1015, 1023, 1424
AlwNI	CAGNNNCTG	1 cut(s)	1334
Aor51HI	AGCGCT	1 cut(s)	18
AoxI	GGCC	4 cut(s)	89, 741, 1068, 1813
ApoI	RAATTY	2 cut(s)	653, 666
AseI	ATTAAT	1 cut(s)	2289
Asp700I	GAANNNNTTC	2 cut(s)	1251, 1987
AspA2I	CCTAGG	1 cut(s)	1832
AspLEI	GCGC	2 cut(s)	19, 1278
AspS9I	GGNCC	4 cut(s)	89, 1175, 2404, 2417
AsuHPI	GGTGA	3 cut(s)	963, 1133, 2148
AsuNHI	GCTAGC	1 cut(s)	1853
AvaII	GGWCC	3 cut(s)	1175, 2404, 2417
AvrII	CCTAGG	1 cut(s)	1832
BaeGI	GKGCMC	1 cut(s)	1125
BanI	GGYRCC	1 cut(s)	1730
BanII	GRGCYC	3 cut(s)	186, 1211, 1926
BarI	GAAGNNNNNNTAC	2 cut(s)	531, 563
Bbv12I	GWGCWC	5 cut(s)	186, 1211, 1621, 1916, 1926
BccI	CCATC	9 cut(s)	257, 367, 763, 974, 1283, 1294, 1351, 2000, 2479
BceAI	ACGGC	4 cut(s)	170, 1522, 1709, 1800
BcgI	CGANNNNNNTGC	2 cut(s)	1208, 1242
BcoDI	GTCTC	4 cut(s)	311, 322, 1471, 1484
BfaI	CTAG	7 cut(s)	395, 1454, 1494, 1833, 1854, 1977, 2106
BfmI	CTRYAG	4 cut(s)	834, 975, 2145, 2196
BfoI	RGCGCY	2 cut(s)	20, 1279
BfuAI	ACCTGC	3 cut(s)	709, 982, 2442
BlnI	CCTAGG	1 cut(s)	1832
BlpI	GCTNAGC	3 cut(s)	41, 1920, 2044
Bme18I	GGWCC	3 cut(s)	1175, 2404, 2417
BmgBI	CACGTC	2 cut(s)	808, 952
BmgT120I	GGNCC	4 cut(s)	89, 1175, 2404, 2417
BmiI	GGNNCC	5 cut(s)	1176, 1732, 2405, 2406, 2432
BmsI	GCATC	5 cut(s)	412, 553, 1321, 1653, 2480
BmtI	GCTAGC	1 cut(s)	1857
BpmI	CTGGAG	3 cut(s)	179, 2145, 2234
Bpu10I	CCTNAGC	1 cut(s)	2271
Bpu1102I	GCTNAGC	3 cut(s)	41, 1920, 2044
BpuEI	CTTGAG	1 cut(s)	1930
BsaBI	GATNNNNATC	1 cut(s)	773
BsaHI	GRCGYC	1 cut(s)	1464
BsaJI	CCNNGG	2 cut(s)	618, 1832
BsaXI	ACNNNNNCTCC	4 cut(s)	599, 629, 878, 908
Bsc4I	CCNNNNNNNGG	6 cut(s)	395, 415, 980, 1042, 1652, 2414
Bse1I	ACTGG	1 cut(s)	2217
Bse8I	GATNNNNATC	1 cut(s)	773
BseDI	CCNNGG	2 cut(s)	618, 1832
BseGI	GGATG	6 cut(s)	994, 1239, 1668, 1808, 2011, 2495
BseJI	GATNNNNATC	1 cut(s)	773
BseLI	CCNNNNNNNGG	6 cut(s)	395, 415, 980, 1042, 1652, 2414
BseMII	CTCAG	8 cut(s)	873, 1482, 1524, 1562, 1911, 2058, 2076, 2262
BseNI	ACTGG	1 cut(s)	2217
BseRI	GAGGAG	3 cut(s)	458, 899, 2151
BseSI	GKGCMC	1 cut(s)	1125
BseX3I	CGGCCG	1 cut(s)	1813
BseYI	CCCAGC	3 cut(s)	1117, 2048, 2150
BsgI	GTGCAG	2 cut(s)	830, 1115
Bsh1285I	CGRYCG	1 cut(s)	1816
BshFI	GGCC	4 cut(s)	91, 743, 1070, 1815
BshNI	GGYRCC	1 cut(s)	1730
BsiEI	CGRYCG	1 cut(s)	1816
BsiHKAI	GWGCWC	5 cut(s)	186, 1211, 1621, 1916, 1926
BsiSI	CCGG	2 cut(s)	1433, 1812
BslFI	GGGAC	5 cut(s)	879, 1475, 1750, 2089, 2390
BslI	CCNNNNNNNGG	6 cut(s)	395, 415, 980, 1042, 1652, 2414
BsmAI	GTCTC	4 cut(s)	311, 322, 1471, 1484
BsmBI	CGTCTC	1 cut(s)	1471
BsmFI	GGGAC	5 cut(s)	879, 1475, 1750, 2089, 2390
BsnI	GGCC	4 cut(s)	91, 743, 1070, 1815
Bsp1286I	GDGCHC	6 cut(s)	186, 1125, 1211, 1621, 1916, 1926
Bsp1407I	TGTACA	2 cut(s)	1236, 1563
Bsp143I	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
Bsp1720I	GCTNAGC	3 cut(s)	41, 1920, 2044
BspACI	CCGC	9 cut(s)	369, 1026, 1576, 1851, 1884, 2028, 2275, 2420, 2423
BspANI	GGCC	4 cut(s)	91, 743, 1070, 1815
BspCNI	CTCAG	8 cut(s)	874, 1481, 1523, 1563, 1912, 2057, 2077, 2263
BspHI	TCATGA	1 cut(s)	1411
BspLI	GGNNCC	5 cut(s)	1176, 1732, 2405, 2406, 2432
BspMAI	CTGCAG	3 cut(s)	838, 979, 2200
BspMI	ACCTGC	3 cut(s)	709, 982, 2442
BspOI	GCTAGC	1 cut(s)	1857
BspPI	GGATC	4 cut(s)	380, 1015, 1023, 1424
BspQI	GCTCTTC	1 cut(s)	704
BspT107I	GGYRCC	1 cut(s)	1730
BsrBI	CCGCTC	1 cut(s)	2275
BsrGI	TGTACA	2 cut(s)	1236, 1563
BsrI	ACTGG	1 cut(s)	2217
BssECI	CCNNGG	2 cut(s)	618, 1832
BssMI	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
BssNI	GRCGYC	1 cut(s)	1464
BssT1I	CCWWGG	2 cut(s)	618, 1832
Bst4CI	ACNGT	4 cut(s)	414, 1271, 1478, 2190
Bst6I	CTCTTC	4 cut(s)	510, 704, 1290, 1962
BstACI	GRCGYC	1 cut(s)	1464
BstAPI	GCANNNNNTGC	1 cut(s)	75
BstAUI	TGTACA	2 cut(s)	1236, 1563
BstC8I	GCNNGC	9 cut(s)	347, 633, 1322, 1326, 1855, 1882, 1967, 2142, 2439
BstEII	GGTNACC	1 cut(s)	2154
BstENI	CCTNNNNNAGG	2 cut(s)	393, 2412
BstF5I	GGATG	6 cut(s)	994, 1239, 1668, 1808, 2011, 2495
BstH2I	RGCGCY	2 cut(s)	20, 1279
BstHHI	GCGC	2 cut(s)	19, 1278
BstKTI	GATC	7 cut(s)	388, 777, 1010, 1018, 1432, 1651, 1894
BstMAI	GTCTC	4 cut(s)	311, 322, 1471, 1484
BstMBI	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
BstMCI	CGRYCG	1 cut(s)	1816
BstMWI	GCNNNNNNNGC	7 cut(s)	75, 81, 389, 859, 1129, 1877, 2312
BstNSI	RCATGY	7 cut(s)	49, 349, 635, 1168, 1969, 2101, 2319
BstPI	GGTNACC	1 cut(s)	2154
BstSFI	CTRYAG	4 cut(s)	834, 975, 2145, 2196
BstSLI	GKGCMC	1 cut(s)	1125
BstX2I	RGATCY	1 cut(s)	1015
BstYI	RGATCY	1 cut(s)	1015
BstZI	CGGCCG	1 cut(s)	1813
BsuRI	GGCC	4 cut(s)	91, 743, 1070, 1815
BtrI	CACGTC	2 cut(s)	808, 952
BtsCI	GGATG	6 cut(s)	994, 1239, 1668, 1808, 2011, 2495
BtsI	GCAGTG	4 cut(s)	1359, 1864, 1914, 2432
BtsIMutI	CAGTG	7 cut(s)	506, 1242, 1359, 1864, 1914, 2432, 2487
BveI	ACCTGC	3 cut(s)	709, 982, 2442
Cac8I	GCNNGC	9 cut(s)	347, 633, 1322, 1326, 1855, 1882, 1967, 2142, 2439
CaiI	CAGNNNCTG	1 cut(s)	1334
CciI	TCATGA	1 cut(s)	1411
CfoI	GCGC	2 cut(s)	19, 1278
Cfr13I	GGNCC	4 cut(s)	89, 1175, 2404, 2417
Csp6I	GTAC	3 cut(s)	992, 1237, 1564
CviQI	GTAC	3 cut(s)	992, 1237, 1564
DpnI	GATC	7 cut(s)	387, 776, 1009, 1017, 1431, 1650, 1893
DpnII	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
DraI	TTTAAA	1 cut(s)	460
EaeI	YGGCCR	1 cut(s)	1813
EagI	CGGCCG	1 cut(s)	1813
Eam1104I	CTCTTC	4 cut(s)	510, 704, 1290, 1962
EarI	CTCTTC	4 cut(s)	510, 704, 1290, 1962
EciI	GGCGGA	2 cut(s)	1591, 2409
Ecl136II	GAGCTC	3 cut(s)	184, 1209, 1924
EclXI	CGGCCG	1 cut(s)	1813
Eco130I	CCWWGG	2 cut(s)	618, 1832
Eco24I	GRGCYC	3 cut(s)	186, 1211, 1926
Eco47I	GGWCC	3 cut(s)	1175, 2404, 2417
Eco47III	AGCGCT	1 cut(s)	18
Eco52I	CGGCCG	1 cut(s)	1813
Eco53kI	GAGCTC	3 cut(s)	184, 1209, 1924
Eco57I	CTGAAG	1 cut(s)	957
Eco91I	GGTNACC	1 cut(s)	2154
EcoICRI	GAGCTC	3 cut(s)	184, 1209, 1924
EcoNI	CCTNNNNNAGG	2 cut(s)	393, 2412
EcoO109I	RGGNCCY	3 cut(s)	89, 1175, 2404
EcoO65I	GGTNACC	1 cut(s)	2154
EcoT14I	CCWWGG	2 cut(s)	618, 1832
EcoT22I	ATGCAT	1 cut(s)	1971
EcoT38I	GRGCYC	3 cut(s)	186, 1211, 1926
ErhI	CCWWGG	2 cut(s)	618, 1832
Esp3I	CGTCTC	1 cut(s)	1471
FaqI	GGGAC	5 cut(s)	879, 1475, 1750, 2089, 2390
FauI	CCCGC	1 cut(s)	2021
FblI	GTMKAC	1 cut(s)	1473
FokI	GGATG	5 cut(s)	1001, 1246, 1675, 1795, 2018
FriOI	GRGCYC	3 cut(s)	186, 1211, 1926
FspBI	CTAG	7 cut(s)	395, 1454, 1494, 1833, 1854, 1977, 2106
GlaI	GCGC	2 cut(s)	18, 1277
GsaI	CCCAGC	3 cut(s)	1121, 2052, 2154
GsuI	CTGGAG	3 cut(s)	179, 2145, 2234
HaeII	RGCGCY	2 cut(s)	20, 1279
HaeIII	GGCC	4 cut(s)	91, 743, 1070, 1815
HapII	CCGG	2 cut(s)	1433, 1812
HhaI	GCGC	2 cut(s)	19, 1278
Hin1I	GRCGYC	1 cut(s)	1464
Hin6I	GCGC	2 cut(s)	17, 1276
HinP1I	GCGC	2 cut(s)	17, 1276
HincII	GTYRAC	2 cut(s)	1339, 1953
HindII	GTYRAC	2 cut(s)	1339, 1953
HindIII	AAGCTT	1 cut(s)	569
HpaII	CCGG	2 cut(s)	1433, 1812
HphI	GGTGA	3 cut(s)	963, 1133, 2148
Hpy166II	GTNNAC	7 cut(s)	607, 1339, 1474, 1566, 1655, 1953, 2345
Hpy188III	TCNNGA	8 cut(s)	445, 551, 778, 1256, 1264, 1412, 1646, 1909
Hpy8I	GTNNAC	7 cut(s)	607, 1339, 1474, 1566, 1655, 1953, 2345
HpyAV	CCTTC	7 cut(s)	730, 932, 1143, 1188, 1306, 1452, 2408
HpyCH4III	ACNGT	4 cut(s)	414, 1271, 1478, 2190
HpyCH4IV	ACGT	7 cut(s)	807, 951, 1249, 1464, 1657, 2244, 2347
HpyF10VI	GCNNNNNNNGC	7 cut(s)	75, 81, 389, 859, 1129, 1877, 2312
HpySE526I	ACGT	7 cut(s)	807, 951, 1249, 1464, 1657, 2244, 2347
Hsp92I	GRCGYC	1 cut(s)	1464
HspAI	GCGC	2 cut(s)	17, 1276
KflI	GGGWCCC	1 cut(s)	2404
Kzo9I	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
LguI	GCTCTTC	1 cut(s)	704
LmnI	GCTCC	6 cut(s)	160, 361, 598, 620, 1214, 2126
LweI	GCATC	5 cut(s)	412, 553, 1321, 1653, 2480
MaeI	CTAG	7 cut(s)	395, 1454, 1494, 1833, 1854, 1977, 2106
MaeII	ACGT	7 cut(s)	807, 951, 1249, 1464, 1657, 2244, 2347
MaeIII	GTNAC	7 cut(s)	175, 803, 877, 1045, 1775, 2154, 2251
MalI	GATC	7 cut(s)	387, 776, 1009, 1017, 1431, 1650, 1893
MbiI	CCGCTC	1 cut(s)	2275
MboI	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
MfeI	CAATTG	1 cut(s)	70
MflI	RGATCY	1 cut(s)	1015
MhlI	GDGCHC	6 cut(s)	186, 1125, 1211, 1621, 1916, 1926
MlyI	GAGTC	6 cut(s)	145, 893, 933, 1234, 1724, 1948
MmeI	TCCRAC	5 cut(s)	433, 820, 876, 1149, 1640
Mph1103I	ATGCAT	1 cut(s)	1971
MroXI	GAANNNNTTC	2 cut(s)	1251, 1987
MseI	TTAA	4 cut(s)	459, 1641, 2289, 2330
MslI	CAYNNNNRTG	4 cut(s)	434, 767, 1329, 1801
MspA1I	CMGCKG	2 cut(s)	814, 2048
MspI	CCGG	2 cut(s)	1433, 1812
MunI	CAATTG	1 cut(s)	70
MwoI	GCNNNNNNNGC	7 cut(s)	75, 81, 389, 859, 1129, 1877, 2312
NdeII	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
NheI	GCTAGC	1 cut(s)	1853
NlaIV	GGNNCC	5 cut(s)	1176, 1732, 2405, 2406, 2432
NmeAIII	GCCGAG	1 cut(s)	881
NmuCI	GTSAC	4 cut(s)	803, 877, 1045, 2154
NsiI	ATGCAT	1 cut(s)	1971
NspI	RCATGY	7 cut(s)	49, 349, 635, 1168, 1969, 2101, 2319
OliI	CACNNNNGTG	1 cut(s)	1801
PaeI	GCATGC	3 cut(s)	349, 635, 1969
PagI	TCATGA	1 cut(s)	1411
PaqCI	CACCTGC	1 cut(s)	982
PciSI	GCTCTTC	1 cut(s)	704
PdmI	GAANNNNTTC	2 cut(s)	1251, 1987
PfeI	GAWTC	5 cut(s)	146, 749, 1052, 1408, 1682
PflMI	CCANNNNNTGG	2 cut(s)	1042, 1652
PleI	GAGTC	6 cut(s)	144, 893, 932, 1233, 1723, 1948
PpsI	GAGTC	6 cut(s)	144, 893, 932, 1233, 1723, 1948
PpuMI	RGGWCCY	2 cut(s)	1175, 2404
PshBI	ATTAAT	1 cut(s)	2289
PsiI	TTATAA	1 cut(s)	2336
Psp124BI	GAGCTC	3 cut(s)	186, 1211, 1926
Psp5II	RGGWCCY	2 cut(s)	1175, 2404
PspEI	GGTNACC	1 cut(s)	2154
PspFI	CCCAGC	3 cut(s)	1117, 2048, 2150
PspN4I	GGNNCC	5 cut(s)	1176, 1732, 2405, 2406, 2432
PspPI	GGNCC	4 cut(s)	89, 1175, 2404, 2417
PspPPI	RGGWCCY	2 cut(s)	1175, 2404
PstI	CTGCAG	3 cut(s)	838, 979, 2200
PstNI	CAGNNNCTG	1 cut(s)	1334
PsuI	RGATCY	1 cut(s)	1015
PvuII	CAGCTG	2 cut(s)	814, 2048
RsaI	GTAC	3 cut(s)	993, 1238, 1565
RsaNI	GTAC	3 cut(s)	992, 1237, 1564
RseI	CAYNNNNRTG	4 cut(s)	434, 767, 1329, 1801
SacI	GAGCTC	3 cut(s)	186, 1211, 1926
SapI	GCTCTTC	1 cut(s)	704
SaqAI	TTAA	4 cut(s)	459, 1641, 2289, 2330
Sau3AI	GATC	7 cut(s)	385, 774, 1007, 1015, 1429, 1648, 1891
Sau96I	GGNCC	4 cut(s)	89, 1175, 2404, 2417
SchI	GAGTC	6 cut(s)	145, 893, 933, 1234, 1724, 1948
SduI	GDGCHC	6 cut(s)	186, 1125, 1211, 1621, 1916, 1926
SfaNI	GCATC	5 cut(s)	412, 553, 1321, 1653, 2480
SfcI	CTRYAG	4 cut(s)	834, 975, 2145, 2196
SinI	GGWCC	3 cut(s)	1175, 2404, 2417
SmiMI	CAYNNNNRTG	4 cut(s)	434, 767, 1329, 1801
SmlI	CTYRAG	1 cut(s)	1909
SmoI	CTYRAG	1 cut(s)	1909
SphI	GCATGC	3 cut(s)	349, 635, 1969
SsiI	CCGC	9 cut(s)	369, 1026, 1576, 1851, 1884, 2028, 2275, 2420, 2423
SspI	AATATT	1 cut(s)	124
SspMI	CTAG	7 cut(s)	395, 1454, 1494, 1833, 1854, 1977, 2106
SstI	GAGCTC	3 cut(s)	186, 1211, 1926
StyI	CCWWGG	2 cut(s)	618, 1832
TaaI	ACNGT	4 cut(s)	414, 1271, 1478, 2190
TaiI	ACGT	7 cut(s)	810, 954, 1252, 1467, 1660, 2247, 2350
TaqI	TCGA	3 cut(s)	444, 471, 1265
TatI	WGTACW	3 cut(s)	991, 1236, 1563
TauI	GCSGC	1 cut(s)	2425
TfiI	GAWTC	5 cut(s)	146, 749, 1052, 1408, 1682
Tru1I	TTAA	4 cut(s)	459, 1641, 2289, 2330
Tru9I	TTAA	4 cut(s)	459, 1641, 2289, 2330
TscAI	CASTG	7 cut(s)	513, 1249, 1359, 1864, 1921, 2432, 2487
TseFI	GTSAC	4 cut(s)	803, 877, 1045, 2154
Tsp45I	GTSAC	4 cut(s)	803, 877, 1045, 2154
TspRI	CASTG	7 cut(s)	513, 1249, 1359, 1864, 1921, 2432, 2487
Van91I	CCANNNNNTGG	2 cut(s)	1042, 1652
VpaK11BI	GGWCC	3 cut(s)	1175, 2404, 2417
VspI	ATTAAT	1 cut(s)	2289
XagI	CCTNNNNNAGG	2 cut(s)	393, 2412
XapI	RAATTY	2 cut(s)	653, 666
XceI	RCATGY	7 cut(s)	49, 349, 635, 1168, 1969, 2101, 2319
XmaJI	CCTAGG	1 cut(s)	1832
XmiI	GTMKAC	1 cut(s)	1473
XmnI	GAANNNNTTC	2 cut(s)	1251, 1987
XspI	CTAG	7 cut(s)	395, 1454, 1494, 1833, 1854, 1977, 2106
ZraI	GACGTC	1 cut(s)	1465
Zsp2I	ATGCAT	1 cut(s)	1971

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.