Rmu_sc0005304.1_g000003

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005304.1
Physical Location & Seq
Forward (+)
27806 .. 29428
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005304.1_g000003.1.cds

Sequence Viewer

Length: 1623 bp
atgcaggtactaagagatgtgactgaggaggctttgttggactcggcaagtgtcaaagaggagggagtcaagcaaactgaaggtttatctgacgtgctgcctgaacttctttcacctgcagatggattggatgtactgaatatgcagggatcattggatcttattaccgcaaatatccaagtggtggtcacagaatcggaagaaatagaggccattgataattcaacaaggaatgtgcaggaagaagaaaaagtagagctggggcactcaacgccttcttctcaccataatccccaattcaacagcatgttggagggtccttcctatcttgtttcaaagcagcttccgagctcctgtgagcaagagagtcagtggatgtacaacactgaacgtgttcttgatttctcgaacagtaagcgcccacttgaagatggggaagagatggcattgatgaaggtatgcaagcacgcagatgctgttgacagagtggaagcagtgatggataatcttgctctttcccatgccaactctgaccagccaaatgaccagaatcatgaggggaaaaaatatgatccggcttcactattccaccaactaggaagggacgtctcagtagactgtctcgttcgttgttctagggctgattacggctcagttgccatgctgtgtaggagtttccgttctctaattcggagtggggagctgtacactctgaggcggagaatgggtattgtagaacattgggcttacttctcttgtgctctctctgaatggtgggcatttaatccagatcgtggacgttggatgcctctgcctaaaatagaatcaaatgaaagtttcatgtattcagataaggagtctttagccgttggcaccgaacttcttgtatttggaaaggaaataatgtcccatgtgtgttacaaatacagccttttgactcacaggtggtcatctggccgtttgatgaatacacctaggttcttgttcgcttctgctagcagtggggaaattgccattgtagctggcggttgcgatctatgtggcaatatcttgagcactgctgagctctacaattcagaaacaggaacttggttgactcttccgagcatgcatgaacctagaagaatgtgttctggggtatttatggatgggaagttttatgtcattggcgggattggtggcagctcagctggggaggtttatgatttggagagggggacttggactgagatacctaacatgcaccctagaaaaaagaaaggggctggagcaactgatgtgcctgctatagctgggtcacctcctctggttgcagttgtaaataacatattgtatgctgcagattggggaaaactggaggtaagaaaatatgataaggagaggaacgtgtgggttactattgggggattgcctgagcggacatactcaattaatggttggggagtagcatttcgggcatgtggtaatcggttaattataatcggtggacctaggggttcaagcgtagagcaaattgaagtcaattcttgggtccctgatgaaggtccgccgcagtggaacctgctcgctataagggaagatttgcgaggctttgtctataattgttcagtgatgggatgctga

Protein Analysis

540

Amino Acids

59.99

Weight (kDa)

5.06

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1478
AarI CACCTGC 1 cut(s) 124
AatII GACGTC 1 cut(s) 609
Acc36I ACCTGC 2 cut(s) 124, 1569
AccB1I GGYRCC 1 cut(s) 872
AccB7I CCANNNNNTGG 2 cut(s) 184, 794
AccBSI CCGCTC 1 cut(s) 1417
AccI GTMKAC 1 cut(s) 615
AciI CCGC 7 cut(s) 168, 718, 1026, 1170, 1417, 1547, 1550
AclWI GGATC 3 cut(s) 157, 165, 566
AcoI YGGCCR 1 cut(s) 955
AcuI CTGAAG 1 cut(s) 99
AcyI GRCGYC 1 cut(s) 606
AfaI GTAC 4 cut(s) 9, 135, 380, 707
AfiI CCNNNNNNNGG 4 cut(s) 122, 184, 794, 1541
AflIII ACRYGT 2 cut(s) 391, 1386
AgsI TTSAA 6 cut(s) 225, 301, 336, 428, 1500, 1517
AjiI CACGTC 1 cut(s) 94
AloI GAACNNNNNNTCC 2 cut(s) 664, 696
AluBI AGCT 9 cut(s) 259, 343, 351, 703, 1022, 1066, 1185, 1190, 1292
AluI AGCT 9 cut(s) 259, 343, 351, 703, 1022, 1066, 1185, 1190, 1292
Alw21I GWGCWC 4 cut(s) 353, 763, 1058, 1068
Alw26I GTCTC 2 cut(s) 613, 626
AlwI GGATC 3 cut(s) 157, 165, 566
AlwNI CAGNNNCTG 1 cut(s) 476
AoxI GGCC 2 cut(s) 210, 955
ApeKI GCWGC 4 cut(s) 97, 340, 1182, 1337
AseI ATTAAT 1 cut(s) 1431
Asp700I GAANNNNTTC 2 cut(s) 393, 1129
AspA2I CCTAGG 2 cut(s) 974, 1490
AspLEI GCGC 1 cut(s) 420
AspS9I GGNCC 4 cut(s) 317, 1487, 1531, 1544
AsuHPI GGTGA 3 cut(s) 105, 275, 1290
AsuNHI GCTAGC 1 cut(s) 995
AvaII GGWCC 4 cut(s) 317, 1487, 1531, 1544
AvrII CCTAGG 2 cut(s) 974, 1490
BaeGI GKGCMC 1 cut(s) 267
BanI GGYRCC 1 cut(s) 872
BanII GRGCYC 2 cut(s) 353, 1068
Bbv12I GWGCWC 4 cut(s) 353, 763, 1058, 1068
BbvI GCAGC 4 cut(s) 84, 352, 1194, 1324
BccI CCATC 6 cut(s) 116, 425, 436, 493, 1142, 1606
BceAI ACGGC 3 cut(s) 664, 851, 942
BcoDI GTCTC 2 cut(s) 613, 626
BfaI CTAG 7 cut(s) 596, 636, 975, 996, 1119, 1248, 1491
BfmI CTRYAG 3 cut(s) 117, 1287, 1338
BfoI RGCGCY 1 cut(s) 421
BfuAI ACCTGC 2 cut(s) 124, 1569
BisI GCNGC 5 cut(s) 98, 341, 1183, 1338, 1550
BlnI CCTAGG 2 cut(s) 974, 1490
BlpI GCTNAGC 2 cut(s) 1062, 1186
BlsI GCNGC 5 cut(s) 99, 342, 1184, 1339, 1551
Bme18I GGWCC 4 cut(s) 317, 1487, 1531, 1544
BmgBI CACGTC 1 cut(s) 94
BmgT120I GGNCC 4 cut(s) 317, 1487, 1531, 1544
BmiI GGNNCC 5 cut(s) 318, 874, 1532, 1533, 1559
BmsI GCATC 3 cut(s) 463, 795, 1607
BmtI GCTAGC 1 cut(s) 999
BpmI CTGGAG 2 cut(s) 1287, 1376
Bpu10I CCTNAGC 1 cut(s) 1413
Bpu1102I GCTNAGC 2 cut(s) 1062, 1186
BpuEI CTTGAG 1 cut(s) 1072
BsaHI GRCGYC 1 cut(s) 606
BsaJI CCNNGG 2 cut(s) 974, 1490
BsaXI ACNNNNNCTCC 6 cut(s) 20, 50, 664, 694, 712, 742
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 184, 794, 1541
Bse1I ACTGG 1 cut(s) 1359
BseDI CCNNGG 2 cut(s) 974, 1490
BseGI GGATG 5 cut(s) 136, 381, 810, 1153, 1622
BseLI CCNNNNNNNGG 4 cut(s) 122, 184, 794, 1541
BseMII CTCAG 8 cut(s) 15, 624, 666, 704, 1053, 1200, 1218, 1404
BseNI ACTGG 1 cut(s) 1359
BseRI GAGGAG 3 cut(s) 41, 74, 1293
BseSI GKGCMC 1 cut(s) 267
BseXI GCAGC 4 cut(s) 84, 352, 1194, 1324
BseYI CCCAGC 3 cut(s) 259, 1190, 1292
BsgI GTGCAG 1 cut(s) 257
BshFI GGCC 2 cut(s) 212, 957
BshNI GGYRCC 1 cut(s) 872
BsiHKAI GWGCWC 4 cut(s) 353, 763, 1058, 1068
BsiSI CCGG 1 cut(s) 575
BslFI GGGAC 4 cut(s) 617, 892, 1231, 1517
BslI CCNNNNNNNGG 4 cut(s) 122, 184, 794, 1541
BsmAI GTCTC 2 cut(s) 613, 626
BsmBI CGTCTC 1 cut(s) 613
BsmFI GGGAC 4 cut(s) 617, 892, 1231, 1517
BsnI GGCC 2 cut(s) 212, 957
Bsp1286I GDGCHC 5 cut(s) 267, 353, 763, 1058, 1068
Bsp1407I TGTACA 2 cut(s) 378, 705
Bsp143I GATC 5 cut(s) 149, 157, 571, 790, 1033
Bsp1720I GCTNAGC 2 cut(s) 1062, 1186
BspACI CCGC 7 cut(s) 168, 718, 1026, 1170, 1417, 1547, 1550
BspANI GGCC 2 cut(s) 212, 957
BspCNI CTCAG 8 cut(s) 16, 623, 665, 705, 1054, 1199, 1219, 1405
BspHI TCATGA 1 cut(s) 553
BspLI GGNNCC 5 cut(s) 318, 874, 1532, 1533, 1559
BspMAI CTGCAG 2 cut(s) 121, 1342
BspMI ACCTGC 2 cut(s) 124, 1569
BspOI GCTAGC 1 cut(s) 999
BspPI GGATC 3 cut(s) 157, 165, 566
BspT107I GGYRCC 1 cut(s) 872
BsrBI CCGCTC 1 cut(s) 1417
BsrGI TGTACA 2 cut(s) 378, 705
BsrI ACTGG 1 cut(s) 1359
BssECI CCNNGG 2 cut(s) 974, 1490
BssMI GATC 5 cut(s) 149, 157, 571, 790, 1033
BssNI GRCGYC 1 cut(s) 606
BssT1I CCWWGG 2 cut(s) 974, 1490
Bst4CI ACNGT 2 cut(s) 413, 620
Bst6I CTCTTC 2 cut(s) 432, 1104
BstACI GRCGYC 1 cut(s) 606
BstAUI TGTACA 2 cut(s) 378, 705
BstC8I GCNNGC 7 cut(s) 464, 468, 997, 1024, 1109, 1284, 1566
BstDEI CTNAG 9 cut(s) 11, 24, 610, 652, 713, 1062, 1186, 1227, 1413
BstEII GGTNACC 1 cut(s) 1296
BstENI CCTNNNNNAGG 1 cut(s) 1539
BstF5I GGATG 5 cut(s) 136, 381, 810, 1153, 1622
BstH2I RGCGCY 1 cut(s) 421
BstHHI GCGC 1 cut(s) 420
BstKTI GATC 5 cut(s) 152, 160, 574, 793, 1036
BstMAI GTCTC 2 cut(s) 613, 626
BstMBI GATC 5 cut(s) 149, 157, 571, 790, 1033
BstMWI GCNNNNNNNGC 3 cut(s) 271, 1019, 1454
BstNSI RCATGY 4 cut(s) 310, 1111, 1243, 1461
BstPI GGTNACC 1 cut(s) 1296
BstSFI CTRYAG 3 cut(s) 117, 1287, 1338
BstSLI GKGCMC 1 cut(s) 267
BstV1I GCAGC 4 cut(s) 84, 352, 1194, 1324
BstX2I RGATCY 1 cut(s) 157
BstYI RGATCY 1 cut(s) 157
BsuRI GGCC 2 cut(s) 212, 957
BtrI CACGTC 1 cut(s) 94
BtsCI GGATG 5 cut(s) 136, 381, 810, 1153, 1622
BtsI GCAGTG 4 cut(s) 501, 1006, 1056, 1559
BtsIMutI CAGTG 7 cut(s) 377, 384, 501, 1006, 1056, 1559, 1614
BveI ACCTGC 2 cut(s) 124, 1569
Cac8I GCNNGC 7 cut(s) 464, 468, 997, 1024, 1109, 1284, 1566
CaiI CAGNNNCTG 1 cut(s) 476
CciI TCATGA 1 cut(s) 553
CfoI GCGC 1 cut(s) 420
Cfr13I GGNCC 4 cut(s) 317, 1487, 1531, 1544
Csp6I GTAC 4 cut(s) 8, 134, 379, 706
CviQI GTAC 4 cut(s) 8, 134, 379, 706
DdeI CTNAG 9 cut(s) 11, 24, 610, 652, 713, 1062, 1186, 1227, 1413
DpnI GATC 5 cut(s) 151, 159, 573, 792, 1035
DpnII GATC 5 cut(s) 149, 157, 571, 790, 1033
EaeI YGGCCR 1 cut(s) 955
Eam1104I CTCTTC 2 cut(s) 432, 1104
EarI CTCTTC 2 cut(s) 432, 1104
EciI GGCGGA 2 cut(s) 733, 1536
Ecl136II GAGCTC 2 cut(s) 351, 1066
Eco130I CCWWGG 2 cut(s) 974, 1490
Eco24I GRGCYC 2 cut(s) 353, 1068
Eco47I GGWCC 4 cut(s) 317, 1487, 1531, 1544
Eco53kI GAGCTC 2 cut(s) 351, 1066
Eco57I CTGAAG 1 cut(s) 99
Eco91I GGTNACC 1 cut(s) 1296
EcoICRI GAGCTC 2 cut(s) 351, 1066
EcoNI CCTNNNNNAGG 1 cut(s) 1539
EcoO109I RGGNCCY 2 cut(s) 317, 1531
EcoO65I GGTNACC 1 cut(s) 1296
EcoT14I CCWWGG 2 cut(s) 974, 1490
EcoT22I ATGCAT 1 cut(s) 1113
EcoT38I GRGCYC 2 cut(s) 353, 1068
ErhI CCWWGG 2 cut(s) 974, 1490
Esp3I CGTCTC 1 cut(s) 613
FaqI GGGAC 4 cut(s) 617, 892, 1231, 1517
FauI CCCGC 1 cut(s) 1163
FblI GTMKAC 1 cut(s) 615
Fnu4HI GCNGC 5 cut(s) 98, 341, 1183, 1338, 1550
FokI GGATG 4 cut(s) 143, 388, 817, 1160
FriOI GRGCYC 2 cut(s) 353, 1068
Fsp4HI GCNGC 5 cut(s) 98, 341, 1183, 1338, 1550
FspBI CTAG 7 cut(s) 596, 636, 975, 996, 1119, 1248, 1491
GlaI GCGC 1 cut(s) 419
GluI GCNGC 5 cut(s) 98, 341, 1183, 1338, 1550
GsaI CCCAGC 3 cut(s) 263, 1194, 1296
GsuI CTGGAG 2 cut(s) 1287, 1376
HaeII RGCGCY 1 cut(s) 421
HaeIII GGCC 2 cut(s) 212, 957
HapII CCGG 1 cut(s) 575
HhaI GCGC 1 cut(s) 420
Hin1I GRCGYC 1 cut(s) 606
Hin6I GCGC 1 cut(s) 418
HinP1I GCGC 1 cut(s) 418
HincII GTYRAC 2 cut(s) 481, 1095
HindII GTYRAC 2 cut(s) 481, 1095
HinfI GANTC 9 cut(s) 41, 66, 194, 367, 550, 824, 857, 937, 1096
HpaII CCGG 1 cut(s) 575
HphI GGTGA 3 cut(s) 105, 275, 1290
Hpy166II GTNNAC 6 cut(s) 481, 616, 708, 797, 1095, 1487
Hpy188III TCNNGA 5 cut(s) 398, 406, 554, 788, 1051
Hpy8I GTNNAC 6 cut(s) 481, 616, 708, 797, 1095, 1487
HpyAV CCTTC 6 cut(s) 74, 285, 330, 448, 594, 1535
HpyCH4III ACNGT 2 cut(s) 413, 620
HpyCH4IV ACGT 5 cut(s) 93, 391, 606, 799, 1386
HpyCH4V TGCA 9 cut(s) 4, 119, 145, 238, 462, 1111, 1243, 1313, 1340
HpyF10VI GCNNNNNNNGC 3 cut(s) 271, 1019, 1454
HpyF3I CTNAG 9 cut(s) 11, 24, 610, 652, 713, 1062, 1186, 1227, 1413
HpySE526I ACGT 5 cut(s) 93, 391, 606, 799, 1386
Hsp92I GRCGYC 1 cut(s) 606
HspAI GCGC 1 cut(s) 418
KflI GGGWCCC 1 cut(s) 1531
Kzo9I GATC 5 cut(s) 149, 157, 571, 790, 1033
LmnI GCTCC 3 cut(s) 356, 700, 1268
Lsp1109I GCAGC 4 cut(s) 84, 352, 1194, 1324
LweI GCATC 3 cut(s) 463, 795, 1607
MaeI CTAG 7 cut(s) 596, 636, 975, 996, 1119, 1248, 1491
MaeII ACGT 5 cut(s) 93, 391, 606, 799, 1386
MaeIII GTNAC 5 cut(s) 19, 187, 917, 1296, 1393
MalI GATC 5 cut(s) 151, 159, 573, 792, 1035
MbiI CCGCTC 1 cut(s) 1417
MboI GATC 5 cut(s) 149, 157, 571, 790, 1033
MboII GAAGA 9 cut(s) 212, 254, 257, 270, 440, 449, 1091, 1134, 1589
MflI RGATCY 1 cut(s) 157
MhlI GDGCHC 5 cut(s) 267, 353, 763, 1058, 1068
MlyI GAGTC 6 cut(s) 35, 75, 376, 866, 931, 1090
MmeI TCCRAC 3 cut(s) 18, 291, 782
Mph1103I ATGCAT 1 cut(s) 1113
MroXI GAANNNNTTC 2 cut(s) 393, 1129
MseI TTAA 3 cut(s) 783, 1431, 1472
MslI CAYNNNNRTG 1 cut(s) 471
MspA1I CMGCKG 1 cut(s) 1190
MspI CCGG 1 cut(s) 575
MwoI GCNNNNNNNGC 3 cut(s) 271, 1019, 1454
NdeII GATC 5 cut(s) 149, 157, 571, 790, 1033
NheI GCTAGC 1 cut(s) 995
NlaIV GGNNCC 5 cut(s) 318, 874, 1532, 1533, 1559
NmeAIII GCCGAG 1 cut(s) 23
NmuCI GTSAC 3 cut(s) 19, 187, 1296
NsiI ATGCAT 1 cut(s) 1113
NspI RCATGY 4 cut(s) 310, 1111, 1243, 1461
PaeI GCATGC 1 cut(s) 1111
PagI TCATGA 1 cut(s) 553
PaqCI CACCTGC 1 cut(s) 124
PdmI GAANNNNTTC 2 cut(s) 393, 1129
PfeI GAWTC 3 cut(s) 194, 550, 824
PflMI CCANNNNNTGG 2 cut(s) 184, 794
PkrI GCNGC 5 cut(s) 99, 342, 1184, 1339, 1551
PleI GAGTC 6 cut(s) 35, 74, 375, 865, 931, 1090
PpsI GAGTC 6 cut(s) 35, 74, 375, 865, 931, 1090
PpuMI RGGWCCY 2 cut(s) 317, 1531
PshBI ATTAAT 1 cut(s) 1431
PsiI TTATAA 1 cut(s) 1478
Psp124BI GAGCTC 2 cut(s) 353, 1068
Psp5II RGGWCCY 2 cut(s) 317, 1531
PspEI GGTNACC 1 cut(s) 1296
PspFI CCCAGC 3 cut(s) 259, 1190, 1292
PspN4I GGNNCC 5 cut(s) 318, 874, 1532, 1533, 1559
PspPI GGNCC 4 cut(s) 317, 1487, 1531, 1544
PspPPI RGGWCCY 2 cut(s) 317, 1531
PstI CTGCAG 2 cut(s) 121, 1342
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 1 cut(s) 157
PvuII CAGCTG 1 cut(s) 1190
RsaI GTAC 4 cut(s) 9, 135, 380, 707
RsaNI GTAC 4 cut(s) 8, 134, 379, 706
RseI CAYNNNNRTG 1 cut(s) 471
SacI GAGCTC 2 cut(s) 353, 1068
SaqAI TTAA 3 cut(s) 783, 1431, 1472
SatI GCNGC 5 cut(s) 98, 341, 1183, 1338, 1550
Sau3AI GATC 5 cut(s) 149, 157, 571, 790, 1033
Sau96I GGNCC 4 cut(s) 317, 1487, 1531, 1544
SchI GAGTC 6 cut(s) 35, 75, 376, 866, 931, 1090
SduI GDGCHC 5 cut(s) 267, 353, 763, 1058, 1068
SfaNI GCATC 3 cut(s) 463, 795, 1607
SfcI CTRYAG 3 cut(s) 117, 1287, 1338
SinI GGWCC 4 cut(s) 317, 1487, 1531, 1544
SmiMI CAYNNNNRTG 1 cut(s) 471
SmlI CTYRAG 1 cut(s) 1051
SmoI CTYRAG 1 cut(s) 1051
SphI GCATGC 1 cut(s) 1111
SsiI CCGC 7 cut(s) 168, 718, 1026, 1170, 1417, 1547, 1550
SspMI CTAG 7 cut(s) 596, 636, 975, 996, 1119, 1248, 1491
SstI GAGCTC 2 cut(s) 353, 1068
StyI CCWWGG 2 cut(s) 974, 1490
TaaI ACNGT 2 cut(s) 413, 620
TaiI ACGT 5 cut(s) 96, 394, 609, 802, 1389
TaqI TCGA 1 cut(s) 407
TatI WGTACW 3 cut(s) 133, 378, 705
TauI GCSGC 1 cut(s) 1552
TfiI GAWTC 3 cut(s) 194, 550, 824
Tru1I TTAA 3 cut(s) 783, 1431, 1472
Tru9I TTAA 3 cut(s) 783, 1431, 1472
TscAI CASTG 7 cut(s) 377, 391, 501, 1006, 1063, 1559, 1614
TseFI GTSAC 3 cut(s) 19, 187, 1296
TseI GCWGC 4 cut(s) 97, 340, 1182, 1337
Tsp45I GTSAC 3 cut(s) 19, 187, 1296
TspDTI ATGAA 6 cut(s) 467, 829, 846, 980, 1128, 1554
TspGWI ACGGA 1 cut(s) 668
TspRI CASTG 7 cut(s) 377, 391, 501, 1006, 1063, 1559, 1614
Van91I CCANNNNNTGG 2 cut(s) 184, 794
VpaK11BI GGWCC 4 cut(s) 317, 1487, 1531, 1544
VspI ATTAAT 1 cut(s) 1431
XagI CCTNNNNNAGG 1 cut(s) 1539
XceI RCATGY 4 cut(s) 310, 1111, 1243, 1461
XmaJI CCTAGG 2 cut(s) 974, 1490
XmiI GTMKAC 1 cut(s) 615
XmnI GAANNNNTTC 2 cut(s) 393, 1129
XspI CTAG 7 cut(s) 596, 636, 975, 996, 1119, 1248, 1491
ZraI GACGTC 1 cut(s) 607
Zsp2I ATGCAT 1 cut(s) 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.