Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001960

Physical Location & Seq

Genomic Coordinates Reverse (-)

57128438 .. 57130755

Gene Structure 2318 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0437600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGAAAACCCAGACAACACAAAAGCCACAAGATCACCACCACCTCCGCCGCCGCAACAACCAGACCCCAAGAAGCTCAAAATGTCCACCACCACCACCGACGACGAAGAAACCACCACCACCGCCCAAAAGCAACGCATCAAACGCCGCAAGGTCGCAATCTTCTTCGCCTACTGCGGCGTCGGATACCAAGGAATGCAAAAGAACCCCGGCGCCAAGACCATCGAAGGCGACCTCGAAGAAGCCCTCTACCTCTCCGGCGCGGTCCCCGAGCAGGACCGCAACAACCCTAAGCGTTATGACTGGGCCCGCTCGGCCCGTACCGACAAGGGCGTCAGCGCCGTGGGCCAGGTCGTATCGGGCCGGTTCTATGTCGACCCGCCGGGGTTCGTGGACCGCCTCAATTCGAACCTCTGCCCGCAAATTCGGATTTTCGGGTACAAGCGCGTGACGGCGTCGTTTAATGCGAAGAAGTTCTGTGATCGGAGAAGGTATGTTTATCTTATTCCTGTGTTTGCTCTTGATCCTAGTGCCCATAGGGATAGAGAGAGTGTTAAGGCGAGTTTGGGGTCTGATGAGGAGTTTGTGAAGTGCTTGGAGTGCTCCGATAGGGGGCGGAAAGTCGGTGGATTGATGGGTAAGCGCACTTATGAATTGAGAGGTGATAGTTCGAATTCGGAATCTGTAAATGGAGGAATTAGCACAAATGATGATTCTCATATGAAAAACGACATTGCCAATGATATTGGGGTTTCTGAAGTTGAAGTTGAGGTGGTTGCCAATGCGGATATGAACTCTGAGGTCAGTGGAGAAGAGAAGCAGGTCGTGAAGGGAAGTGGGTTTTGTTATGGTGAGAAGGAGAAGGAAAGGTTTAATAGAATCTTGAGTTGTTACCAGGGTACTCACAACTTCCACAACTTCACCACTAGAACTAAGGCTGAAGACCCTGCTGCAACGAGATACATTATTTCGTTCACTGCAAATACCACGGTTACAGTTGAGGGTATTGAATTTGTGAAGTGTGAGGTCGTGGGGCAGAGCTTCATGCTTCATCAGATTAGGAAGTTAATTGGGCTGGCAGTGGCAATCATGAGGAACTGTGCTCCTGAGTCGTTGTTAGAAAGAGCTTTGCAAAAGGATGTTAACGTCAATGTGCCTACGGCTCCTGAGGTTGGTTTGTACTTGGATGAGTGCTTCTTCTCATCATATAACCAGAAATGGGGAGACACTCATGAAGAAGTGTCGATGAAAGACTATGAAGCAGAGGCAGAAGCTTTCAAAATGAAGCATATTTACACTCATATTGGAGCCACTGAGCATAAAGAAGGTGTTGTGGGTCTCTGGTTGCACTCTCTTAACCACCGCAATTATCCGGATTTAGGTGCTGACAACAATGGAGACACCAGCATCGAAAGGACTGCTGATATCTCCAGTGCTGACAACAATGGGGATACCAGCAACGGAAAGACTGCATATATCGCCAGTGCTGACAACAATGGAGACACCAGCAACGGAAAGACTGCCAATATCTCCAGTGCTGACAACAATGGAGACACCAGCAACAGAAAGACCGCCGATATCTCCAGTGCTGACAACAATGGGGATACCAGCAATGGAAAGACTGCGTATATCGCCACTGCTGACAACAATGGGGATACCAGCAATGGAAAGACTGCGTATATCGCCACTGCTGACAACAATGGGGATACCAGCAATGGAAAGACTGCGTATATCGCTACTGCTGACAACAATGGAGACACCAGCAAGGCTGATATCTCCAATGTCGCCCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Kelch_1

Protein Analysis

597

Amino Acids

65.24

Weight (kDa)

5.43

Isoelectric Point (pI)

29.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PseudoU_synth_1	PF01416	298 - 400	4.4e-12	tRNA pseudouridine synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74510 AT1G74510 AT1G74510
fragaria_vesca	FvH4_5g15231 FvH4_5g15231
malus_domestica	MD14G1197300.v1.1
prunus_persica	Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1
pyrus_communis	pycom06g16900 pycom14g16390
rosa_chinensis	RchiOBHm_Chr1g0373971 RchiOBHm_Chr1g0373981 RchiOBHm_Chr7g0180901
rosa_laevigata	RLG00000005225 RLG00000026789 RLG00000026790
rosa_multiflora	Rmu_sc0002740.1_g000003 Rmu_sc0004056.1_g000009 Rmu_sc0005304.1_g000003 Rmu_sc0006924.1_g000003
rosa_roxburghii	Rroxscaffold_3G00272420 Rroxscaffold_4G00283850
rosa_rugosa	Rorug06G0437100 Rorug06G0437100 Rorug06G0437100 Rorug06G0437100 Rorug06G0437200.1 Rorug06G0437300 Rorug06G0437400 Rorug06G0437500 Rorug06G0437600 Rorug06G0437700
rosa_samantha	Rh7AG038800 Rh7BG038300 Rh7CG039900 Rh7DG038400
rosa_wichuraiana	Rw1G034480 Rw7G003180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	332
Acc36I	ACCTGC	1 cut(s)	811
AccB1I	GGYRCC	1 cut(s)	212
AccBSI	CCGCTC	1 cut(s)	312
AccI	GTMKAC	1 cut(s)	375
AccII	CGCG	2 cut(s)	263, 447
AccIII	TCCGGA	1 cut(s)	1372
AclWI	GGATC	1 cut(s)	518
AcsI	RAATTY	3 cut(s)	423, 673, 1010
AcuI	CTGAAG	2 cut(s)	777, 960
AcyI	GRCGYC	4 cut(s)	180, 213, 333, 455
AfaI	GTAC	4 cut(s)	322, 440, 901, 1181
AfiI	CCNNNNNNNGG	5 cut(s)	274, 612, 1172, 1219, 1379
AgsI	TTSAA	3 cut(s)	764, 1010, 1279
AjnI	CCWGG	2 cut(s)	348, 894
AluBI	AGCT	4 cut(s)	76, 1041, 1127, 1274
AluI	AGCT	4 cut(s)	76, 1041, 1127, 1274
Alw21I	GWGCWC	2 cut(s)	605, 1105
Alw26I	GTCTC	6 cut(s)	1218, 1343, 1392, 1494, 1545, 1749
AlwI	GGATC	1 cut(s)	518
Ama87I	CYCGRG	1 cut(s)	269
Aor13HI	TCCGGA	1 cut(s)	1372
AoxI	GGCC	4 cut(s)	306, 315, 346, 361
ApaI	GGGCCC	1 cut(s)	310
ApeKI	GCWGC	1 cut(s)	950
ApoI	RAATTY	3 cut(s)	423, 673, 1010
Asp700I	GAANNNNTTC	1 cut(s)	473
AspLEI	GCGC	5 cut(s)	215, 263, 341, 447, 645
AspS9I	GGNCC	8 cut(s)	265, 277, 306, 307, 316, 346, 361, 394
AsuC2I	CCSGG	2 cut(s)	210, 384
AsuHPI	GGTGA	4 cut(s)	27, 674, 863, 913
AsuII	TTCGAA	2 cut(s)	407, 671
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	3 cut(s)	265, 277, 394
AxyI	CCTNAGG	1 cut(s)	1167
BaeGI	GKGCMC	2 cut(s)	310, 535
BanI	GGYRCC	1 cut(s)	212
BanII	GRGCYC	1 cut(s)	310
BarI	GAAGNNNNNNTAC	2 cut(s)	1277, 1309
BbsI	GAAGAC	1 cut(s)	948
Bbv12I	GWGCWC	2 cut(s)	605, 1105
BbvI	GCAGC	1 cut(s)	937
BccI	CCATC	2 cut(s)	230, 628
BceAI	ACGGC	3 cut(s)	326, 468, 1176
BcgI	CGANNNNNNTGC	2 cut(s)	1400, 1434
BciT130I	CCWGG	2 cut(s)	350, 896
BciVI	GTATCC	5 cut(s)	179, 1444, 1597, 1648, 1699
BcnI	CCSGG	2 cut(s)	210, 384
BcoDI	GTCTC	6 cut(s)	1218, 1343, 1392, 1494, 1545, 1749
BfaI	CTAG	2 cut(s)	528, 927
BfoI	RGCGCY	2 cut(s)	216, 342
BfuAI	ACCTGC	1 cut(s)	811
BfuI	GTATCC	5 cut(s)	179, 1444, 1597, 1648, 1699
BglI	GCCNNNNNGGC	1 cut(s)	314
BisI	GCNGC	5 cut(s)	50, 53, 148, 178, 951
BlsI	GCNGC	5 cut(s)	51, 54, 149, 179, 952
Bme1390I	CCNGG	4 cut(s)	210, 350, 384, 896
Bme18I	GGWCC	3 cut(s)	265, 277, 394
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	8 cut(s)	265, 277, 306, 307, 316, 346, 361, 394
BmiI	GGNNCC	5 cut(s)	214, 267, 308, 1164, 1309
BmrFI	CCNGG	4 cut(s)	210, 350, 384, 896
BmrI	ACTGGG	2 cut(s)	313, 1783
BmsI	GCATC	2 cut(s)	147, 1416
BmuI	ACTGGG	2 cut(s)	313, 1783
BpiI	GAAGAC	1 cut(s)	948
BpmI	CTGGAG	3 cut(s)	1414, 1516, 1567
Bpu10I	CCTNAGC	1 cut(s)	291
Bpu14I	TTCGAA	2 cut(s)	407, 671
BpuEI	CTTGAG	1 cut(s)	904
BpuMI	CCSGG	2 cut(s)	210, 384
BsaHI	GRCGYC	4 cut(s)	180, 213, 333, 455
BsaI	GGTCTC	1 cut(s)	1343
BsaJI	CCNNGG	6 cut(s)	190, 208, 342, 383, 895, 987
BsaWI	WCCGGW	1 cut(s)	1372
Bsc4I	CCNNNNNNNGG	5 cut(s)	274, 612, 1172, 1219, 1379
Bse118I	RCCGGY	1 cut(s)	363
Bse1I	ACTGG	6 cut(s)	308, 1431, 1482, 1533, 1584, 1789
Bse21I	CCTNAGG	1 cut(s)	1167
Bse3DI	GCAATG	4 cut(s)	732, 1618, 1669, 1720
BseAI	TCCGGA	1 cut(s)	1372
BseBI	CCWGG	2 cut(s)	350, 896
BseDI	CCNNGG	6 cut(s)	190, 208, 342, 383, 895, 987
BseGI	GGATG	2 cut(s)	1144, 1192
BseLI	CCNNNNNNNGG	5 cut(s)	274, 612, 1172, 1219, 1379
BseMI	GCAATG	4 cut(s)	732, 1618, 1669, 1720
BseMII	CTCAG	4 cut(s)	789, 1098, 1158, 1305
BseNI	ACTGG	6 cut(s)	308, 1431, 1482, 1533, 1584, 1789
BseRI	GAGGAG	1 cut(s)	593
BseSI	GKGCMC	2 cut(s)	310, 535
BseXI	GCAGC	1 cut(s)	937
Bsh1236I	CGCG	2 cut(s)	263, 447
BshFI	GGCC	4 cut(s)	308, 317, 348, 363
BshNI	GGYRCC	1 cut(s)	212
BsiHKAI	GWGCWC	2 cut(s)	605, 1105
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	5 cut(s)	210, 258, 364, 383, 1373
BslFI	GGGAC	1 cut(s)	251
BslI	CCNNNNNNNGG	5 cut(s)	274, 612, 1172, 1219, 1379
BsmAI	GTCTC	6 cut(s)	1218, 1343, 1392, 1494, 1545, 1749
BsmFI	GGGAC	1 cut(s)	251
BsmI	GAATGC	1 cut(s)	201
BsnI	GGCC	4 cut(s)	308, 317, 348, 363
Bso31I	GGTCTC	1 cut(s)	1343
BsoBI	CYCGRG	1 cut(s)	269
Bsp119I	TTCGAA	2 cut(s)	407, 671
Bsp120I	GGGCCC	1 cut(s)	306
Bsp1286I	GDGCHC	4 cut(s)	310, 535, 605, 1105
Bsp13I	TCCGGA	1 cut(s)	1372
Bsp143I	GATC	3 cut(s)	32, 481, 523
BspANI	GGCC	4 cut(s)	308, 317, 348, 363
BspCNI	CTCAG	4 cut(s)	790, 1099, 1159, 1306
BspEI	TCCGGA	1 cut(s)	1372
BspFNI	CGCG	2 cut(s)	263, 447
BspHI	TCATGA	2 cut(s)	1089, 1231
BspLI	GGNNCC	5 cut(s)	214, 267, 308, 1164, 1309
BspMI	ACCTGC	1 cut(s)	811
BspPI	GGATC	1 cut(s)	518
BspT104I	TTCGAA	2 cut(s)	407, 671
BspT107I	GGYRCC	1 cut(s)	212
BspTNI	GGTCTC	1 cut(s)	1343
BsrBI	CCGCTC	1 cut(s)	312
BsrDI	GCAATG	4 cut(s)	732, 1618, 1669, 1720
BsrFI	RCCGGY	1 cut(s)	363
BsrI	ACTGG	6 cut(s)	308, 1431, 1482, 1533, 1584, 1789
BssAI	RCCGGY	1 cut(s)	363
BssECI	CCNNGG	6 cut(s)	190, 208, 342, 383, 895, 987
BssMI	GATC	3 cut(s)	32, 481, 523
BssNI	GRCGYC	4 cut(s)	180, 213, 333, 455
BssT1I	CCWWGG	1 cut(s)	190
Bst2UI	CCWGG	2 cut(s)	350, 896
Bst4CI	ACNGT	3 cut(s)	991, 997, 1100
Bst6I	CTCTTC	1 cut(s)	807
BstACI	GRCGYC	4 cut(s)	180, 213, 333, 455
BstBI	TTCGAA	2 cut(s)	407, 671
BstC8I	GCNNGC	3 cut(s)	310, 419, 1077
BstDEI	CTNAG	6 cut(s)	291, 798, 933, 1107, 1167, 1314
BstDSI	CCRYGG	2 cut(s)	342, 987
BstF5I	GGATG	2 cut(s)	1144, 1192
BstFNI	CGCG	2 cut(s)	263, 447
BstH2I	RGCGCY	2 cut(s)	216, 342
BstHHI	GCGC	5 cut(s)	215, 263, 341, 447, 645
BstKTI	GATC	3 cut(s)	35, 484, 526
BstMAI	GTCTC	6 cut(s)	1218, 1343, 1392, 1494, 1545, 1749
BstMBI	GATC	3 cut(s)	32, 481, 523
BstMWI	GCNNNNNNNGC	8 cut(s)	144, 314, 345, 600, 1478, 1631, 1682, 1733
BstNI	CCWGG	2 cut(s)	350, 896
BstSCI	CCNGG	4 cut(s)	208, 348, 382, 894
BstSLI	GKGCMC	2 cut(s)	310, 535
BstUI	CGCG	2 cut(s)	263, 447
BstV1I	GCAGC	1 cut(s)	937
BstV2I	GAAGAC	1 cut(s)	948
Bsu36I	CCTNAGG	1 cut(s)	1167
BsuI	GTATCC	5 cut(s)	179, 1444, 1597, 1648, 1699
BsuRI	GGCC	4 cut(s)	308, 317, 348, 363
BtgI	CCRYGG	2 cut(s)	342, 987
BtsCI	GGATG	2 cut(s)	1144, 1192
BtsI	GCAGTG	4 cut(s)	975, 1086, 1635, 1686
BveI	ACCTGC	1 cut(s)	811
Cac8I	GCNNGC	3 cut(s)	310, 419, 1077
CciI	TCATGA	2 cut(s)	1089, 1231
CfoI	GCGC	5 cut(s)	215, 263, 341, 447, 645
Cfr10I	RCCGGY	1 cut(s)	363
Cfr13I	GGNCC	8 cut(s)	265, 277, 306, 307, 316, 346, 361, 394
CseI	GACGC	3 cut(s)	169, 322, 444
Csp6I	GTAC	4 cut(s)	321, 439, 900, 1180
CviAII	CATG	3 cut(s)	1045, 1090, 1232
CviQI	GTAC	4 cut(s)	321, 439, 900, 1180
DdeI	CTNAG	6 cut(s)	291, 798, 933, 1107, 1167, 1314
DinI	GGCGCC	1 cut(s)	214
DpnI	GATC	3 cut(s)	34, 483, 525
DpnII	GATC	3 cut(s)	32, 481, 523
DrdI	GACNNNNNNGTC	1 cut(s)	332
DseDI	GACNNNNNNGTC	1 cut(s)	332
Eam1104I	CTCTTC	1 cut(s)	807
EarI	CTCTTC	1 cut(s)	807
EciI	GGCGGA	2 cut(s)	36, 631
Eco130I	CCWWGG	1 cut(s)	190
Eco24I	GRGCYC	1 cut(s)	310
Eco31I	GGTCTC	1 cut(s)	1343
Eco32I	GATATC	3 cut(s)	1426, 1579, 1774
Eco47I	GGWCC	3 cut(s)	265, 277, 394
Eco57I	CTGAAG	2 cut(s)	777, 960
Eco81I	CCTNAGG	1 cut(s)	1167
Eco88I	CYCGRG	1 cut(s)	269
EcoRI	GAATTC	1 cut(s)	673
EcoRII	CCWGG	2 cut(s)	348, 894
EcoRV	GATATC	3 cut(s)	1426, 1579, 1774
EcoT14I	CCWWGG	1 cut(s)	190
EcoT38I	GRGCYC	1 cut(s)	310
EgeI	GGCGCC	1 cut(s)	214
EheI	GGCGCC	1 cut(s)	214
ErhI	CCWWGG	1 cut(s)	190
FaeI	CATG	3 cut(s)	1048, 1093, 1235
FaqI	GGGAC	1 cut(s)	251
FatI	CATG	3 cut(s)	1044, 1089, 1231
FauI	CCCGC	3 cut(s)	317, 387, 426
FauNDI	CATATG	1 cut(s)	720
FblI	GTMKAC	1 cut(s)	375
Fnu4HI	GCNGC	5 cut(s)	50, 53, 148, 178, 951
FokI	GGATG	2 cut(s)	1151, 1199
FriOI	GRGCYC	1 cut(s)	310
Fsp4HI	GCNGC	5 cut(s)	50, 53, 148, 178, 951
FspBI	CTAG	2 cut(s)	528, 927
GlaI	GCGC	5 cut(s)	214, 262, 340, 446, 644
GluI	GCNGC	5 cut(s)	50, 53, 148, 178, 951
GsuI	CTGGAG	3 cut(s)	1414, 1516, 1567
HaeII	RGCGCY	2 cut(s)	216, 342
HaeIII	GGCC	4 cut(s)	308, 317, 348, 363
HapII	CCGG	5 cut(s)	210, 258, 364, 383, 1373
HgaI	GACGC	3 cut(s)	169, 322, 444
HhaI	GCGC	5 cut(s)	215, 263, 341, 447, 645
Hin1I	GRCGYC	4 cut(s)	180, 213, 333, 455
Hin1II	CATG	3 cut(s)	1048, 1093, 1235
Hin6I	GCGC	5 cut(s)	213, 261, 339, 445, 643
HinP1I	GCGC	5 cut(s)	213, 261, 339, 445, 643
HincII	GTYRAC	2 cut(s)	376, 1144
HindII	GTYRAC	2 cut(s)	376, 1144
HindIII	AAGCTT	1 cut(s)	1272
HinfI	GANTC	4 cut(s)	680, 713, 879, 1109
HpaI	GTTAAC	1 cut(s)	1144
HpaII	CCGG	5 cut(s)	210, 258, 364, 383, 1373
HphI	GGTGA	4 cut(s)	27, 674, 863, 913
Hpy166II	GTNNAC	5 cut(s)	87, 376, 394, 975, 1144
Hpy188I	TCNGA	9 cut(s)	185, 429, 486, 574, 607, 679, 757, 799, 1056
Hpy188III	TCNNGA	8 cut(s)	521, 826, 883, 1090, 1106, 1166, 1232, 1373
Hpy8I	GTNNAC	5 cut(s)	87, 376, 394, 975, 1144
Hpy99I	CGWCG	4 cut(s)	104, 107, 185, 460
HpyAV	CCTTC	6 cut(s)	221, 483, 823, 850, 856, 1319
HpyCH4III	ACNGT	3 cut(s)	991, 997, 1100
HpyCH4IV	ACGT	1 cut(s)	1146
HpyCH4V	TGCA	6 cut(s)	199, 953, 980, 1132, 1348, 1472
HpyF10VI	GCNNNNNNNGC	8 cut(s)	144, 314, 345, 600, 1478, 1631, 1682, 1733
HpyF3I	CTNAG	6 cut(s)	291, 798, 933, 1107, 1167, 1314
HpySE526I	ACGT	1 cut(s)	1146
Hsp92I	GRCGYC	4 cut(s)	180, 213, 333, 455
Hsp92II	CATG	3 cut(s)	1048, 1093, 1235
HspAI	GCGC	5 cut(s)	213, 261, 339, 445, 643
KasI	GGCGCC	1 cut(s)	212
Kpn2I	TCCGGA	1 cut(s)	1372
KspAI	GTTAAC	1 cut(s)	1144
Kzo9I	GATC	3 cut(s)	32, 481, 523
LmnI	GCTCC	4 cut(s)	608, 1108, 1168, 1307
Lsp1109I	GCAGC	1 cut(s)	937
LweI	GCATC	2 cut(s)	147, 1416
MaeI	CTAG	2 cut(s)	528, 927
MaeII	ACGT	1 cut(s)	1146
MaeIII	GTNAC	3 cut(s)	448, 890, 991
MalI	GATC	3 cut(s)	34, 483, 525
MbiI	CCGCTC	1 cut(s)	312
MboI	GATC	3 cut(s)	32, 481, 523
MboII	GAAGA	9 cut(s)	119, 154, 157, 251, 481, 824, 953, 1189, 1247
MhlI	GDGCHC	4 cut(s)	310, 535, 605, 1105
MluCI	AATT	8 cut(s)	403, 423, 653, 673, 696, 1010, 1068, 1366
Mly113I	GGCGCC	1 cut(s)	213
MlyI	GAGTC	1 cut(s)	1118
MmeI	TCCRAC	1 cut(s)	163
MroI	TCCGGA	1 cut(s)	1372
MroXI	GAANNNNTTC	1 cut(s)	473
MseI	TTAA	6 cut(s)	462, 555, 873, 1067, 1143, 1356
MspI	CCGG	5 cut(s)	210, 258, 364, 383, 1373
MspR9I	CCNGG	4 cut(s)	210, 350, 384, 896
Mva1269I	GAATGC	1 cut(s)	201
MvaI	CCWGG	2 cut(s)	350, 896
MvnI	CGCG	2 cut(s)	263, 447
MwoI	GCNNNNNNNGC	8 cut(s)	144, 314, 345, 600, 1478, 1631, 1682, 1733
NarI	GGCGCC	1 cut(s)	213
NciI	CCSGG	2 cut(s)	210, 384
NdeI	CATATG	1 cut(s)	720
NdeII	GATC	3 cut(s)	32, 481, 523
NlaIII	CATG	3 cut(s)	1048, 1093, 1235
NlaIV	GGNNCC	5 cut(s)	214, 267, 308, 1164, 1309
NmeAIII	GCCGAG	1 cut(s)	293
NmuCI	GTSAC	1 cut(s)	448
NspV	TTCGAA	2 cut(s)	407, 671
PagI	TCATGA	2 cut(s)	1089, 1231
PcsI	WCGNNNNNNNCGW	1 cut(s)	464
PctI	GAATGC	1 cut(s)	201
PdmI	GAANNNNTTC	1 cut(s)	473
PfeI	GAWTC	3 cut(s)	680, 713, 879
PflFI	GACNNNGTC	1 cut(s)	454
PkrI	GCNGC	5 cut(s)	51, 54, 149, 179, 952
PleI	GAGTC	1 cut(s)	1117
PluTI	GGCGCC	1 cut(s)	216
PpsI	GAGTC	1 cut(s)	1117
Psp6I	CCWGG	2 cut(s)	348, 894
PspGI	CCWGG	2 cut(s)	348, 894
PspN4I	GGNNCC	5 cut(s)	214, 267, 308, 1164, 1309
PspOMI	GGGCCC	1 cut(s)	306
PspPI	GGNCC	8 cut(s)	265, 277, 306, 307, 316, 346, 361, 394
PsyI	GACNNNGTC	1 cut(s)	454
RsaI	GTAC	4 cut(s)	322, 440, 901, 1181
RsaNI	GTAC	4 cut(s)	321, 439, 900, 1180
SalI	GTCGAC	1 cut(s)	374
SaqAI	TTAA	6 cut(s)	462, 555, 873, 1067, 1143, 1356
SatI	GCNGC	5 cut(s)	50, 53, 148, 178, 951
Sau3AI	GATC	3 cut(s)	32, 481, 523
Sau96I	GGNCC	8 cut(s)	265, 277, 306, 307, 316, 346, 361, 394
SchI	GAGTC	1 cut(s)	1118
ScrFI	CCNGG	4 cut(s)	210, 350, 384, 896
SduI	GDGCHC	4 cut(s)	310, 535, 605, 1105
SfaNI	GCATC	2 cut(s)	147, 1416
SfiI	GGCCNNNNNGGCC	1 cut(s)	314
SfoI	GGCGCC	1 cut(s)	214
SfuI	TTCGAA	2 cut(s)	407, 671
SinI	GGWCC	3 cut(s)	265, 277, 394
SmlI	CTYRAG	1 cut(s)	883
SmoI	CTYRAG	1 cut(s)	883
Sse9I	AATT	8 cut(s)	403, 423, 653, 673, 696, 1010, 1068, 1366
SspDI	GGCGCC	1 cut(s)	212
SspMI	CTAG	2 cut(s)	528, 927
StyD4I	CCNGG	4 cut(s)	208, 348, 382, 894
StyI	CCWWGG	1 cut(s)	190
TaaI	ACNGT	3 cut(s)	991, 997, 1100
TaiI	ACGT	1 cut(s)	1149
TaqI	TCGA	7 cut(s)	225, 237, 375, 407, 671, 1244, 1410
TasI	AATT	8 cut(s)	403, 423, 653, 673, 696, 1010, 1068, 1366
TatI	WGTACW	1 cut(s)	1179
TauI	GCSGC	4 cut(s)	52, 55, 150, 180
TfiI	GAWTC	3 cut(s)	680, 713, 879
Tru1I	TTAA	6 cut(s)	462, 555, 873, 1067, 1143, 1356
Tru9I	TTAA	6 cut(s)	462, 555, 873, 1067, 1143, 1356
TseFI	GTSAC	1 cut(s)	448
TseI	GCWGC	1 cut(s)	950
Tsp45I	GTSAC	1 cut(s)	448
TspDTI	ATGAA	9 cut(s)	666, 737, 806, 1033, 1040, 1248, 1262, 1272, 1298
TspGWI	ACGGA	2 cut(s)	1476, 1527
Tth111I	GACNNNGTC	1 cut(s)	454
VpaK11BI	GGWCC	3 cut(s)	265, 277, 394
XapI	RAATTY	3 cut(s)	423, 673, 1010
XmiI	GTMKAC	1 cut(s)	375
XmnI	GAANNNNTTC	1 cut(s)	473
XspI	CTAG	2 cut(s)	528, 927

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.