Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001960

Physical Location & Seq

Genomic Coordinates Forward (+)

2462536 .. 2466864

Gene Structure 4329 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG038300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGTTGGAGGGTCCTTCCTATCTTGTTTCAAGGCAGCTTCCAAGTTCCTGTGAGCAAGAGAGTCAGTGGATGTACAACACTCAACGTGTTCTTGATTTCTCGAACAGTAAGCGCCCACTTGAAGATGGGGAAGATGTGGCATTGAGGAAGGCATGCAAGCACGCAGATGCTGTTGACCGAGTGGAAGCAGTGATGGATAATCTTGCTCTTTCCCATGCCAAATCTGATCAGCCAAATGACCAGAATCCTGCTCTTTCCCATGCCAACTGTGACCAGCCAAACGACCAAAATCTTGCTCCTTCCCATGCCCAATCTGACCAGCCGAATGACCAGAGTCTTGCTGATTCCCAGGCCCAATCTGATCAGCCAAATGACCAGAATCCTGCTGTCTCCCATGCCAACTGTGACCAGCCAAACGACCAAAATTTTGCTCCTTTCCGTGCCCAATCTGACCAGCCGAATGACCAGAGTCTTGCTCATTCCCAGGCCGAATCTGACCAGCCAAATGCCCAGAATCTTGCTCCTTCTGATGCCAACTCTGACCAGCCAAATGACCAGAATCAGGACGGGAACAACAATGACCCGACTTCACTATTCCACCAACTTGGAAGGGATGTCTCAATAAACTGTCTCCTTCATTGTTCAAGGGCTGATTACGGCTCAGTTGCCATGCTGTGTAGGAGTTTCCGTTCTCTAATTCGGACTGGGGAGCTGTACACTCTGAGGCGGAGAATGGGTATTGTAGAACATTGGGCTTACTTCTCTTGTGCTCTCTCTGAATGGTGGGCATTTAATCCAGATCGTGGACATTGGATGCCTTTGCCTAAAATGGAAATAAATGGATGTTTTATGTGTTCAGATAAGGAGTCTGTAGCCGTTGGCACCGAACTTCTTGTATTTGGAAAGGAAATAATGTCCCATGTGGTTTACAAATACAGCCTTTTGACACACAGCTGGTCATCCGGCCGTTTGATGAATACACCTAGGTGCTTGTTCGCTTCTGCTAGCAGTGGGGAAATTGCCATTCTAGCTGGCGGTTGCGATCCATGTGGCAATATCTTGAGCACTGCTGAGCTTTACAATTCAGAAACAGGAACTTGGTTGACTCTTCCGAGCATGAATAAACCTAGAAAAATGTGTTCTGGGGTATTTATGGATGGAAAACTTTATGTCATTGGCGGGATTGGAGTGGGCAGCTCAAATGCACTTAGCTGTGGGGAGGTTTATGATTTGGAGAGGGGGACTTGGACTGAGATACCTGACATGCATCCTAGAAAAAATGGAGGGGCTGGAGCAACTGATATGCCTGCTACAGCTGAGGCACCTCCGCTGCTTGCAGTTGTAAATAACAAACTGTATGCTGCAGATTATGCAGAACAGGAGGTGAGAAAATATGATAAGGAGAGGAACGTGTGGGTTACCATTGGGAGATTGCCTGAGCGGACATCCTCAATGAATGGTTGGGGAGTAGCATTTCGGGCATGTGGGAATCGGTTAATTGTAATCGGTGGACCTAGAGGTTCAAGCGTAGGGCAAATTGAAGTCAATTCTTGGGTCCCTGATGAAGGTCCGCCACAGTGGAACCTGCTCGCTATAAAGGATCGGGGAGGCTTTGTCTATAATTGTGCAGTGATGGGATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0030162 GO:0030163 GO:0031461 GO:0031625 GO:0032991 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050789 GO:0051171 GO:0051246 GO:0051603 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Kelch_1

Protein Analysis

547

Amino Acids

60.05

Weight (kDa)

5.03

Isoelectric Point (pI)

45.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_ATRN-LZTR1	PF24981	258 - 423	2.1e-07	Attractin/LZTR1 beta-propeller
Kelch_KLHDC2_KLHL20_DRC7	PF24681	290 - 504	1.4e-07	KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_Calicin	PF13964	305 - 423	6.4e-08	Calicin, beta-propeller domain
Kelch_1	PF01344	328 - 374	1.1e-08	Kelch motif
Kelch_FKB95	PF25210	352 - 421	4e-10	FKB95, Kelch-repeats domain
Kelch_1	PF01344	376 - 422	5.4e-13	Kelch motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001960)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74510 AT1G74510 AT1G74510
fragaria_vesca	FvH4_5g15231 FvH4_5g15231
malus_domestica	MD14G1197300.v1.1
prunus_persica	Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1 Prupe.5G189400_v2.0.a1
pyrus_communis	pycom06g16900 pycom14g16390
rosa_chinensis	RchiOBHm_Chr1g0373971 RchiOBHm_Chr1g0373981 RchiOBHm_Chr7g0180901
rosa_laevigata	RLG00000005225 RLG00000026789 RLG00000026790
rosa_multiflora	Rmu_sc0002740.1_g000003 Rmu_sc0004056.1_g000009 Rmu_sc0005304.1_g000003 Rmu_sc0006924.1_g000003
rosa_roxburghii	Rroxscaffold_3G00272420 Rroxscaffold_4G00283850
rosa_rugosa	Rorug06G0437100 Rorug06G0437100 Rorug06G0437100 Rorug06G0437100 Rorug06G0437200.1 Rorug06G0437300 Rorug06G0437400 Rorug06G0437500 Rorug06G0437600 Rorug06G0437700
rosa_samantha	Rh7AG038800 Rh7BG038300 Rh7CG039900 Rh7DG038400
rosa_wichuraiana	Rw1G034480 Rw7G003180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1593
AccB1I	GGYRCC	2 cut(s)	881, 1321
AccB7I	CCANNNNNTGG	1 cut(s)	803
AccBSI	CCGCTC	1 cut(s)	1441
AciI	CCGC	6 cut(s)	727, 1035, 1179, 1328, 1441, 1571
AclWI	GGATC	2 cut(s)	1037, 1608
AcoI	YGGCCR	1 cut(s)	964
AcsI	RAATTY	1 cut(s)	424
AfaI	GTAC	2 cut(s)	74, 716
AfiI	CCNNNNNNNGG	3 cut(s)	562, 803, 1565
AflIII	ACRYGT	2 cut(s)	85, 1410
AgsI	TTSAA	5 cut(s)	30, 122, 645, 1524, 1541
AjnI	CCWGG	2 cut(s)	348, 483
AleI	CACNNNNGTG	1 cut(s)	985
AloI	GAACNNNNNNTCC	2 cut(s)	673, 705
AluBI	AGCT	8 cut(s)	37, 712, 954, 1031, 1075, 1197, 1212, 1316
AluI	AGCT	8 cut(s)	37, 712, 954, 1031, 1075, 1197, 1212, 1316
Alw21I	GWGCWC	2 cut(s)	772, 1067
Alw26I	GTCTC	3 cut(s)	394, 622, 635
AlwI	GGATC	2 cut(s)	1037, 1608
AlwNI	CAGNNNCTG	1 cut(s)	170
AoxI	GGCC	3 cut(s)	351, 486, 964
ApeKI	GCWGC	4 cut(s)	34, 1194, 1330, 1361
ApoI	RAATTY	1 cut(s)	424
ArsI	GACNNNNNNTTYG	2 cut(s)	410, 442
AspA2I	CCTAGG	1 cut(s)	983
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	5 cut(s)	11, 352, 1511, 1555, 1568
AsuHPI	GGTGA	1 cut(s)	1396
AsuNHI	GCTAGC	1 cut(s)	1004
AvaII	GGWCC	4 cut(s)	11, 1511, 1555, 1568
AvrII	CCTAGG	1 cut(s)	983
BaeGI	GKGCMC	1 cut(s)	445
BanI	GGYRCC	2 cut(s)	881, 1321
Bbv12I	GWGCWC	2 cut(s)	772, 1067
BbvCI	CCTCAGC	1 cut(s)	1317
BbvI	GCAGC	4 cut(s)	46, 1206, 1317, 1348
BccI	CCATC	4 cut(s)	119, 187, 1151, 1627
BceAI	ACGGC	3 cut(s)	673, 860, 951
BciT130I	CCWGG	2 cut(s)	350, 485
BclI	TGATCA	2 cut(s)	226, 361
BcoDI	GTCTC	3 cut(s)	394, 622, 635
BfaI	CTAG	6 cut(s)	984, 1005, 1028, 1128, 1272, 1515
BfmI	CTRYAG	3 cut(s)	870, 1311, 1362
BfoI	RGCGCY	1 cut(s)	115
BfuAI	ACCTGC	1 cut(s)	1593
BisI	GCNGC	4 cut(s)	35, 1195, 1331, 1362
BlnI	CCTAGG	1 cut(s)	983
BlpI	GCTNAGC	1 cut(s)	1071
BlsI	GCNGC	4 cut(s)	36, 1196, 1332, 1363
Bme1390I	CCNGG	2 cut(s)	350, 485
Bme18I	GGWCC	4 cut(s)	11, 1511, 1555, 1568
BmgT120I	GGNCC	5 cut(s)	11, 352, 1511, 1555, 1568
BmiI	GGNNCC	6 cut(s)	12, 883, 1323, 1556, 1557, 1583
BmrFI	CCNGG	2 cut(s)	350, 485
BmrI	ACTGGG	1 cut(s)	714
BmsI	GCATC	5 cut(s)	157, 520, 804, 1276, 1628
BmtI	GCTAGC	1 cut(s)	1008
BmuI	ACTGGG	1 cut(s)	714
BoxI	GACNNNNGTC	2 cut(s)	333, 468
BplI	GAGNNNNNCTC	2 cut(s)	460, 492
BpmI	CTGGAG	1 cut(s)	1311
Bpu10I	CCTNAGC	2 cut(s)	1317, 1437
Bpu1102I	GCTNAGC	1 cut(s)	1071
BpuEI	CTTGAG	1 cut(s)	1081
BsaJI	CCNNGG	3 cut(s)	348, 483, 983
BsaXI	ACNNNNNCTCC	6 cut(s)	673, 703, 721, 751, 1599, 1629
Bsc4I	CCNNNNNNNGG	3 cut(s)	562, 803, 1565
Bse1I	ACTGG	1 cut(s)	709
BseBI	CCWGG	2 cut(s)	350, 485
BseDI	CCNNGG	3 cut(s)	348, 483, 983
BseGI	GGATG	9 cut(s)	75, 619, 819, 848, 959, 1162, 1267, 1445, 1643
BseLI	CCNNNNNNNGG	3 cut(s)	562, 803, 1565
BseMII	CTCAG	6 cut(s)	675, 713, 1062, 1242, 1308, 1428
BseNI	ACTGG	1 cut(s)	709
BseSI	GKGCMC	1 cut(s)	445
BseX3I	CGGCCG	1 cut(s)	964
BseXI	GCAGC	4 cut(s)	46, 1206, 1317, 1348
Bsh1285I	CGRYCG	1 cut(s)	967
BshFI	GGCC	3 cut(s)	353, 488, 966
BshNI	GGYRCC	2 cut(s)	881, 1321
BsiEI	CGRYCG	1 cut(s)	967
BsiHKAI	GWGCWC	2 cut(s)	772, 1067
BsiSI	CCGG	1 cut(s)	963
BslFI	GGGAC	3 cut(s)	901, 1255, 1541
BslI	CCNNNNNNNGG	3 cut(s)	562, 803, 1565
BsmAI	GTCTC	3 cut(s)	394, 622, 635
BsmFI	GGGAC	3 cut(s)	901, 1255, 1541
BsnI	GGCC	3 cut(s)	353, 488, 966
Bsp1286I	GDGCHC	3 cut(s)	445, 772, 1067
Bsp1407I	TGTACA	2 cut(s)	72, 714
Bsp143I	GATC	5 cut(s)	226, 361, 799, 1042, 1600
Bsp1720I	GCTNAGC	1 cut(s)	1071
BspACI	CCGC	6 cut(s)	727, 1035, 1179, 1328, 1441, 1571
BspANI	GGCC	3 cut(s)	353, 488, 966
BspCNI	CTCAG	6 cut(s)	674, 714, 1063, 1243, 1309, 1429
BspLI	GGNNCC	6 cut(s)	12, 883, 1323, 1556, 1557, 1583
BspMAI	CTGCAG	1 cut(s)	1366
BspMI	ACCTGC	1 cut(s)	1593
BspOI	GCTAGC	1 cut(s)	1008
BspPI	GGATC	2 cut(s)	1037, 1608
BspT107I	GGYRCC	2 cut(s)	881, 1321
BsrBI	CCGCTC	1 cut(s)	1441
BsrGI	TGTACA	2 cut(s)	72, 714
BsrI	ACTGG	1 cut(s)	709
BssECI	CCNNGG	3 cut(s)	348, 483, 983
BssMI	GATC	5 cut(s)	226, 361, 799, 1042, 1600
BssT1I	CCWWGG	1 cut(s)	983
Bst2UI	CCWGG	2 cut(s)	350, 485
Bst4CI	ACNGT	6 cut(s)	107, 269, 404, 629, 1356, 1578
Bst6I	CTCTTC	1 cut(s)	1113
BstAPI	GCANNNNNTGC	1 cut(s)	1370
BstAUI	TGTACA	2 cut(s)	72, 714
BstC8I	GCNNGC	8 cut(s)	154, 158, 162, 1006, 1033, 1308, 1335, 1590
BstDEI	CTNAG	7 cut(s)	661, 722, 1071, 1208, 1251, 1317, 1437
BstEII	GGTNACC	1 cut(s)	1417
BstENI	CCTNNNNNAGG	1 cut(s)	1563
BstF5I	GGATG	9 cut(s)	75, 619, 819, 848, 959, 1162, 1267, 1445, 1643
BstH2I	RGCGCY	1 cut(s)	115
BstHHI	GCGC	1 cut(s)	114
BstKTI	GATC	5 cut(s)	229, 364, 802, 1045, 1603
BstMAI	GTCTC	3 cut(s)	394, 622, 635
BstMBI	GATC	5 cut(s)	226, 361, 799, 1042, 1600
BstMCI	CGRYCG	1 cut(s)	967
BstMWI	GCNNNNNNNGC	3 cut(s)	1028, 1370, 1478
BstNI	CCWGG	2 cut(s)	350, 485
BstNSI	RCATGY	3 cut(s)	156, 1267, 1485
BstPAI	GACNNNNGTC	2 cut(s)	333, 468
BstPI	GGTNACC	1 cut(s)	1417
BstSCI	CCNGG	2 cut(s)	348, 483
BstSFI	CTRYAG	3 cut(s)	870, 1311, 1362
BstSLI	GKGCMC	1 cut(s)	445
BstV1I	GCAGC	4 cut(s)	46, 1206, 1317, 1348
BstXI	CCANNNNNNTGG	1 cut(s)	605
BstZI	CGGCCG	1 cut(s)	964
BsuRI	GGCC	3 cut(s)	353, 488, 966
BtsCI	GGATG	9 cut(s)	75, 619, 819, 848, 959, 1162, 1267, 1445, 1643
BtsI	GCAGTG	4 cut(s)	195, 1015, 1065, 1635
BtsIMutI	CAGTG	6 cut(s)	71, 195, 1015, 1065, 1583, 1635
BveI	ACCTGC	1 cut(s)	1593
Cac8I	GCNNGC	8 cut(s)	154, 158, 162, 1006, 1033, 1308, 1335, 1590
CaiI	CAGNNNCTG	1 cut(s)	170
CfoI	GCGC	1 cut(s)	114
Cfr13I	GGNCC	5 cut(s)	11, 352, 1511, 1555, 1568
Csp6I	GTAC	2 cut(s)	73, 715
CviQI	GTAC	2 cut(s)	73, 715
DdeI	CTNAG	7 cut(s)	661, 722, 1071, 1208, 1251, 1317, 1437
DpnI	GATC	5 cut(s)	228, 363, 801, 1044, 1602
DpnII	GATC	5 cut(s)	226, 361, 799, 1042, 1600
EaeI	YGGCCR	1 cut(s)	964
EagI	CGGCCG	1 cut(s)	964
Eam1104I	CTCTTC	1 cut(s)	1113
EarI	CTCTTC	1 cut(s)	1113
EciI	GGCGGA	2 cut(s)	742, 1560
EclXI	CGGCCG	1 cut(s)	964
Eco130I	CCWWGG	1 cut(s)	983
Eco47I	GGWCC	4 cut(s)	11, 1511, 1555, 1568
Eco52I	CGGCCG	1 cut(s)	964
Eco91I	GGTNACC	1 cut(s)	1417
EcoNI	CCTNNNNNAGG	1 cut(s)	1563
EcoO109I	RGGNCCY	2 cut(s)	11, 1555
EcoO65I	GGTNACC	1 cut(s)	1417
EcoRII	CCWGG	2 cut(s)	348, 483
EcoT14I	CCWWGG	1 cut(s)	983
EcoT22I	ATGCAT	1 cut(s)	1269
ErhI	CCWWGG	1 cut(s)	983
FaqI	GGGAC	3 cut(s)	901, 1255, 1541
FauI	CCCGC	1 cut(s)	1172
FbaI	TGATCA	2 cut(s)	226, 361
Fnu4HI	GCNGC	4 cut(s)	35, 1195, 1331, 1362
FokI	GGATG	8 cut(s)	82, 626, 826, 855, 946, 1169, 1254, 1432
Fsp4HI	GCNGC	4 cut(s)	35, 1195, 1331, 1362
FspBI	CTAG	6 cut(s)	984, 1005, 1028, 1128, 1272, 1515
GlaI	GCGC	1 cut(s)	113
GluI	GCNGC	4 cut(s)	35, 1195, 1331, 1362
GsuI	CTGGAG	1 cut(s)	1311
HaeII	RGCGCY	1 cut(s)	115
HaeIII	GGCC	3 cut(s)	353, 488, 966
HapII	CCGG	1 cut(s)	963
HhaI	GCGC	1 cut(s)	114
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HincII	GTYRAC	2 cut(s)	175, 1104
HindII	GTYRAC	2 cut(s)	175, 1104
HpaII	CCGG	1 cut(s)	963
HphI	GGTGA	1 cut(s)	1396
Hpy166II	GTNNAC	6 cut(s)	175, 717, 806, 928, 1104, 1511
Hpy188III	TCNNGA	5 cut(s)	92, 100, 563, 797, 1060
Hpy8I	GTNNAC	6 cut(s)	175, 717, 806, 928, 1104, 1511
HpyAV	CCTTC	7 cut(s)	24, 142, 309, 534, 603, 644, 1559
HpyCH4III	ACNGT	6 cut(s)	107, 269, 404, 629, 1356, 1578
HpyCH4IV	ACGT	2 cut(s)	85, 1410
HpyCH4V	TGCA	7 cut(s)	156, 1205, 1267, 1337, 1364, 1373, 1628
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1028, 1370, 1478
HpyF3I	CTNAG	7 cut(s)	661, 722, 1071, 1208, 1251, 1317, 1437
HpySE526I	ACGT	2 cut(s)	85, 1410
HspAI	GCGC	1 cut(s)	112
KflI	GGGWCCC	1 cut(s)	1555
Ksp22I	TGATCA	2 cut(s)	226, 361
Kzo9I	GATC	5 cut(s)	226, 361, 799, 1042, 1600
LmnI	GCTCC	5 cut(s)	301, 436, 526, 709, 1292
Lsp1109I	GCAGC	4 cut(s)	46, 1206, 1317, 1348
LweI	GCATC	5 cut(s)	157, 520, 804, 1276, 1628
MaeI	CTAG	6 cut(s)	984, 1005, 1028, 1128, 1272, 1515
MaeII	ACGT	2 cut(s)	85, 1410
MaeIII	GTNAC	3 cut(s)	269, 404, 1417
MalI	GATC	5 cut(s)	228, 363, 801, 1044, 1602
MbiI	CCGCTC	1 cut(s)	1441
MboI	GATC	5 cut(s)	226, 361, 799, 1042, 1600
MboII	GAAGA	3 cut(s)	134, 143, 1100
MhlI	GDGCHC	3 cut(s)	445, 772, 1067
MluCI	AATT	8 cut(s)	424, 696, 1017, 1081, 1497, 1536, 1546, 1621
MlyI	GAGTC	5 cut(s)	70, 343, 478, 875, 1099
Mph1103I	ATGCAT	1 cut(s)	1269
MseI	TTAA	2 cut(s)	792, 1496
MslI	CAYNNNNRTG	2 cut(s)	165, 985
MspA1I	CMGCKG	3 cut(s)	954, 1316, 1330
MspI	CCGG	1 cut(s)	963
MspR9I	CCNGG	2 cut(s)	350, 485
MvaI	CCWGG	2 cut(s)	350, 485
MwoI	GCNNNNNNNGC	3 cut(s)	1028, 1370, 1478
NdeII	GATC	5 cut(s)	226, 361, 799, 1042, 1600
NheI	GCTAGC	1 cut(s)	1004
NlaIV	GGNNCC	6 cut(s)	12, 883, 1323, 1556, 1557, 1583
NmuCI	GTSAC	2 cut(s)	269, 404
NsiI	ATGCAT	1 cut(s)	1269
NspI	RCATGY	3 cut(s)	156, 1267, 1485
OliI	CACNNNNGTG	1 cut(s)	985
PaeI	GCATGC	1 cut(s)	156
PfeI	GAWTC	7 cut(s)	244, 344, 379, 491, 514, 559, 1489
PflMI	CCANNNNNTGG	1 cut(s)	803
PkrI	GCNGC	4 cut(s)	36, 1196, 1332, 1363
PleI	GAGTC	5 cut(s)	69, 342, 477, 874, 1099
PpsI	GAGTC	5 cut(s)	69, 342, 477, 874, 1099
PpuMI	RGGWCCY	2 cut(s)	11, 1555
PshAI	GACNNNNGTC	2 cut(s)	333, 468
Psp5II	RGGWCCY	2 cut(s)	11, 1555
Psp6I	CCWGG	2 cut(s)	348, 483
PspEI	GGTNACC	1 cut(s)	1417
PspGI	CCWGG	2 cut(s)	348, 483
PspN4I	GGNNCC	6 cut(s)	12, 883, 1323, 1556, 1557, 1583
PspPI	GGNCC	5 cut(s)	11, 352, 1511, 1555, 1568
PspPPI	RGGWCCY	2 cut(s)	11, 1555
PstI	CTGCAG	1 cut(s)	1366
PstNI	CAGNNNCTG	1 cut(s)	170
PvuII	CAGCTG	2 cut(s)	954, 1316
RsaI	GTAC	2 cut(s)	74, 716
RsaNI	GTAC	2 cut(s)	73, 715
RseI	CAYNNNNRTG	2 cut(s)	165, 985
SaqAI	TTAA	2 cut(s)	792, 1496
SatI	GCNGC	4 cut(s)	35, 1195, 1331, 1362
Sau3AI	GATC	5 cut(s)	226, 361, 799, 1042, 1600
Sau96I	GGNCC	5 cut(s)	11, 352, 1511, 1555, 1568
SchI	GAGTC	5 cut(s)	70, 343, 478, 875, 1099
ScrFI	CCNGG	2 cut(s)	350, 485
SduI	GDGCHC	3 cut(s)	445, 772, 1067
SfaNI	GCATC	5 cut(s)	157, 520, 804, 1276, 1628
SfcI	CTRYAG	3 cut(s)	870, 1311, 1362
SinI	GGWCC	4 cut(s)	11, 1511, 1555, 1568
SmiMI	CAYNNNNRTG	2 cut(s)	165, 985
SmlI	CTYRAG	1 cut(s)	1060
SmoI	CTYRAG	1 cut(s)	1060
SphI	GCATGC	1 cut(s)	156
Sse9I	AATT	8 cut(s)	424, 696, 1017, 1081, 1497, 1536, 1546, 1621
SsiI	CCGC	6 cut(s)	727, 1035, 1179, 1328, 1441, 1571
SspMI	CTAG	6 cut(s)	984, 1005, 1028, 1128, 1272, 1515
StyD4I	CCNGG	2 cut(s)	348, 483
StyI	CCWWGG	1 cut(s)	983
TaaI	ACNGT	6 cut(s)	107, 269, 404, 629, 1356, 1578
TaiI	ACGT	2 cut(s)	88, 1413
TaqI	TCGA	1 cut(s)	101
TaqII	GACCGA	1 cut(s)	192
TasI	AATT	8 cut(s)	424, 696, 1017, 1081, 1497, 1536, 1546, 1621
TatI	WGTACW	2 cut(s)	72, 714
TfiI	GAWTC	7 cut(s)	244, 344, 379, 491, 514, 559, 1489
Tru1I	TTAA	2 cut(s)	792, 1496
Tru9I	TTAA	2 cut(s)	792, 1496
TscAI	CASTG	6 cut(s)	71, 195, 1015, 1072, 1583, 1635
TseFI	GTSAC	2 cut(s)	269, 404
TseI	GCWGC	4 cut(s)	34, 1194, 1330, 1361
Tsp45I	GTSAC	2 cut(s)	269, 404
TspDTI	ATGAA	5 cut(s)	626, 989, 1133, 1469, 1578
TspGWI	ACGGA	2 cut(s)	428, 677
TspRI	CASTG	6 cut(s)	71, 195, 1015, 1072, 1583, 1635
Van91I	CCANNNNNTGG	1 cut(s)	803
VpaK11BI	GGWCC	4 cut(s)	11, 1511, 1555, 1568
XagI	CCTNNNNNAGG	1 cut(s)	1563
XapI	RAATTY	1 cut(s)	424
XceI	RCATGY	3 cut(s)	156, 1267, 1485
XmaJI	CCTAGG	1 cut(s)	983
XspI	CTAG	6 cut(s)	984, 1005, 1028, 1128, 1272, 1515
Zsp2I	ATGCAT	1 cut(s)	1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.