RchiOBHm_Chr1g0376721

BAG family molecular chaperone regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0006122
Physical Location & Seq
Reverse (-)
63934964 .. 63937232
2269 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1026 bp
ATGATGAGAATGAAGAACAAGACGAGCTCAGGGGTGCAAGTGTCAATGTCTAGTATGAATGGAGGGAGCGAGTCTGGGCCGGGGGAGTGGGAGGTCAGGCCCGGAGGAATGTTGGTCCAGAAACGGAATCCGGACTCTGATCGGAACTTGGCGCCTCCGCCGACAGTTCGGGTCCGGGTCAAGCACGGGTCCGTTTACCATGAAATCAGTATTGGCGCCCAAGCTTCGTTTGGGGACTTGAAGAAAATGCTGGTCGGGCCGACGGGTTTGCACCACCTGGATATGAAGCTGTTATTCAAAGACAAGGAGAGGGATTCGAAGGCGTTTCTTGACATTTCCGGAGTGAAAGACCGGTCAAAGATGGTGTGTGTTGAAGACCCTCTTAGCCAAGAAAAGCGGTATCTTGAGATGAGGCGCAATGCCAAAATGGAGAAGGCATCAAAGTCTATCTCCGAAATCAGCTTGGAAGTGGACCGGCTCGCCGGTCAGGTGTCTGCTCTTGAAACAATTATTACTAAAGGTGCAAAAGTTGCAGAACAGGATGTGCTTAAAGTGATTGAGCATTTGATGAATCAGTTGCTTAAATTAGACGGAATTATGGGGGATGGAGATGTGAAGTTGCAAAGGAAAATGCAGGTGAAAAGAGTTCAGAAGTATGTTGAAACTCTGGATGTTTTGAAAGTTAAAAACTCCATGCCTAGTAGCAATGGGGATCATATTCCAAAGCAAGCTCATAGTCATAGACAAAATCATTCCAACGGCAATGGGCGTATCCTAACACCAATTCAAGAGCAGCAACCAAGGAATTCACTTGGGAATTTACCTACACATCAGCAGCAAGGGCAAAAGCAATTACAACAACAACAACCATCCAGGCATTCTACATCAGGGCCAATCGTTACCACGCAGTGGGAGACTTTTGATAATATGCCGCCATTGATCCCAATCTCGTCAACATCTACATCAACAACCTCAGCAGCCAATGGTTCTGCCTACCCTAAATTTAATTGGGAGTCATTCGAGTAA

Protein Analysis

341

Amino Acids

37.94

Weight (kDa)

9.58

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 150 - 225 7.5e-17 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 625
Acc36I ACCTGC 1 cut(s) 625
AccB1I GGYRCC 2 cut(s) 151, 215
AccB7I CCANNNNNTGG 1 cut(s) 909
AccIII TCCGGA 2 cut(s) 130, 338
AciI CCGC 3 cut(s) 158, 397, 932
AclWI GGATC 2 cut(s) 720, 934
AcsI RAATTY 3 cut(s) 805, 817, 1001
AcyI GRCGYC 2 cut(s) 152, 216
AdeI CACNNNGTG 1 cut(s) 909
AfiI CCNNNNNNNGG 1 cut(s) 909
AgeI ACCGGT 1 cut(s) 351
AgsI TTSAA 7 cut(s) 241, 298, 374, 503, 662, 679, 788
AjnI CCWGG 2 cut(s) 276, 872
AjuI GAANNNNNNNTTGG 2 cut(s) 195, 227
AluBI AGCT 5 cut(s) 27, 224, 289, 462, 731
AluI AGCT 5 cut(s) 27, 224, 289, 462, 731
Alw21I GWGCWC 1 cut(s) 29
Alw26I GTCTC 1 cut(s) 908
AlwI GGATC 2 cut(s) 720, 934
Aor13HI TCCGGA 2 cut(s) 130, 338
AoxI GGCC 4 cut(s) 77, 98, 257, 890
ApeKI GCWGC 3 cut(s) 793, 835, 977
ApoI RAATTY 3 cut(s) 805, 817, 1001
AsiGI ACCGGT 1 cut(s) 351
AspLEI GCGC 3 cut(s) 154, 218, 417
AspS9I GGNCC 8 cut(s) 77, 99, 115, 172, 189, 257, 472, 890
AsuC2I CCSGG 3 cut(s) 81, 102, 176
AsuHPI GGTGA 1 cut(s) 649
AsuII TTCGAA 1 cut(s) 317
AvaII GGWCC 4 cut(s) 115, 172, 189, 472
BanI GGYRCC 2 cut(s) 151, 215
BanII GRGCYC 1 cut(s) 29
BbsI GAAGAC 1 cut(s) 381
Bbv12I GWGCWC 1 cut(s) 29
BbvCI CCTCAGC 1 cut(s) 973
BbvI GCAGC 3 cut(s) 805, 847, 989
BccI CCATC 3 cut(s) 355, 599, 877
BceAI ACGGC 1 cut(s) 775
BcgI CGANNNNNNTGC 2 cut(s) 250, 284
BciT130I CCWGG 2 cut(s) 278, 874
BciVI GTATCC 1 cut(s) 782
BcnI CCSGG 3 cut(s) 81, 102, 176
BcoDI GTCTC 1 cut(s) 908
BfaI CTAG 2 cut(s) 51, 699
BfoI RGCGCY 2 cut(s) 155, 219
BfuAI ACCTGC 1 cut(s) 625
BfuI GTATCC 1 cut(s) 782
BisI GCNGC 4 cut(s) 794, 836, 932, 978
BlsI GCNGC 4 cut(s) 795, 837, 933, 979
Bme1390I CCNGG 5 cut(s) 81, 102, 176, 278, 874
Bme18I GGWCC 4 cut(s) 115, 172, 189, 472
BmgT120I GGNCC 8 cut(s) 77, 99, 115, 172, 189, 257, 472, 890
BmiI GGNNCC 4 cut(s) 153, 173, 190, 217
BmrFI CCNGG 5 cut(s) 81, 102, 176, 278, 874
BmsI GCATC 1 cut(s) 446
BpiI GAAGAC 1 cut(s) 381
Bpu10I CCTNAGC 2 cut(s) 28, 973
Bpu14I TTCGAA 1 cut(s) 317
BpuEI CTTGAG 1 cut(s) 425
BpuMI CCSGG 3 cut(s) 81, 102, 176
BsaBI GATNNNNATC 1 cut(s) 944
BsaHI GRCGYC 2 cut(s) 152, 216
BsaJI CCNNGG 2 cut(s) 80, 800
BsaWI WCCGGW 3 cut(s) 130, 338, 351
Bsc4I CCNNNNNNNGG 1 cut(s) 909
Bse118I RCCGGY 3 cut(s) 351, 474, 482
Bse3DI GCAATG 3 cut(s) 424, 712, 769
Bse8I GATNNNNATC 1 cut(s) 944
BseAI TCCGGA 2 cut(s) 130, 338
BseBI CCWGG 2 cut(s) 278, 874
BseDI CCNNGG 2 cut(s) 80, 800
BseGI GGATG 4 cut(s) 547, 610, 676, 869
BseJI GATNNNNATC 1 cut(s) 944
BseLI CCNNNNNNNGG 1 cut(s) 909
BseMI GCAATG 3 cut(s) 424, 712, 769
BseMII CTCAG 2 cut(s) 42, 987
BseXI GCAGC 3 cut(s) 805, 847, 989
BshFI GGCC 4 cut(s) 79, 100, 259, 892
BshNI GGYRCC 2 cut(s) 151, 215
BshTI ACCGGT 1 cut(s) 351
BsiHKAI GWGCWC 1 cut(s) 29
BsiSI CCGG 8 cut(s) 80, 102, 131, 175, 339, 352, 475, 483
BslFI GGGAC 1 cut(s) 248
BslI CCNNNNNNNGG 1 cut(s) 909
BsmAI GTCTC 1 cut(s) 908
BsmFI GGGAC 1 cut(s) 248
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 4 cut(s) 79, 100, 259, 892
Bsp119I TTCGAA 1 cut(s) 317
Bsp1286I GDGCHC 1 cut(s) 29
Bsp13I TCCGGA 2 cut(s) 130, 338
Bsp143I GATC 3 cut(s) 139, 712, 939
BspACI CCGC 3 cut(s) 158, 397, 932
BspANI GGCC 4 cut(s) 79, 100, 259, 892
BspCNI CTCAG 2 cut(s) 41, 986
BspEI TCCGGA 2 cut(s) 130, 338
BspLI GGNNCC 4 cut(s) 153, 173, 190, 217
BspMI ACCTGC 1 cut(s) 625
BspPI GGATC 2 cut(s) 720, 934
BspT104I TTCGAA 1 cut(s) 317
BspT107I GGYRCC 2 cut(s) 151, 215
BsrDI GCAATG 3 cut(s) 424, 712, 769
BsrFI RCCGGY 3 cut(s) 351, 474, 482
BssAI RCCGGY 3 cut(s) 351, 474, 482
BssECI CCNNGG 2 cut(s) 80, 800
BssMI GATC 3 cut(s) 139, 712, 939
BssNI GRCGYC 2 cut(s) 152, 216
BssT1I CCWWGG 1 cut(s) 800
Bst2UI CCWGG 2 cut(s) 278, 874
Bst4CI ACNGT 1 cut(s) 166
BstACI GRCGYC 2 cut(s) 152, 216
BstAPI GCANNNNNTGC 1 cut(s) 530
BstBI TTCGAA 1 cut(s) 317
BstC8I GCNNGC 2 cut(s) 480, 729
BstDEI CTNAG 3 cut(s) 28, 383, 973
BstF5I GGATG 4 cut(s) 547, 610, 676, 869
BstH2I RGCGCY 2 cut(s) 155, 219
BstHHI GCGC 3 cut(s) 154, 218, 417
BstKTI GATC 3 cut(s) 142, 715, 942
BstMAI GTCTC 1 cut(s) 908
BstMBI GATC 3 cut(s) 139, 712, 939
BstMWI GCNNNNNNNGC 3 cut(s) 256, 530, 841
BstNI CCWGG 2 cut(s) 278, 874
BstSCI CCNGG 5 cut(s) 79, 100, 174, 276, 872
BstV1I GCAGC 3 cut(s) 805, 847, 989
BstV2I GAAGAC 1 cut(s) 381
BsuI GTATCC 1 cut(s) 782
BsuRI GGCC 4 cut(s) 79, 100, 259, 892
BtsCI GGATG 4 cut(s) 547, 610, 676, 869
BtsI GCAGTG 1 cut(s) 914
BtsIMutI CAGTG 1 cut(s) 914
BveI ACCTGC 1 cut(s) 625
Cac8I GCNNGC 2 cut(s) 480, 729
CfoI GCGC 3 cut(s) 154, 218, 417
Cfr10I RCCGGY 3 cut(s) 351, 474, 482
Cfr13I GGNCC 8 cut(s) 77, 99, 115, 172, 189, 257, 472, 890
CspAI ACCGGT 1 cut(s) 351
CviAII CATG 2 cut(s) 200, 694
DdeI CTNAG 3 cut(s) 28, 383, 973
DinI GGCGCC 2 cut(s) 153, 217
DpnI GATC 3 cut(s) 141, 714, 941
DpnII GATC 3 cut(s) 139, 712, 939
DraIII CACNNNGTG 1 cut(s) 909
EciI GGCGGA 1 cut(s) 147
Ecl136II GAGCTC 1 cut(s) 27
Eco130I CCWWGG 1 cut(s) 800
Eco24I GRGCYC 1 cut(s) 29
Eco47I GGWCC 4 cut(s) 115, 172, 189, 472
Eco53kI GAGCTC 1 cut(s) 27
EcoICRI GAGCTC 1 cut(s) 27
EcoRI GAATTC 1 cut(s) 805
EcoRII CCWGG 2 cut(s) 276, 872
EcoT14I CCWWGG 1 cut(s) 800
EcoT38I GRGCYC 1 cut(s) 29
EgeI GGCGCC 2 cut(s) 153, 217
EheI GGCGCC 2 cut(s) 153, 217
ErhI CCWWGG 1 cut(s) 800
FaeI CATG 2 cut(s) 203, 697
FalI AAGNNNNNCTT 2 cut(s) 366, 398
FaqI GGGAC 1 cut(s) 248
FatI CATG 2 cut(s) 199, 693
Fnu4HI GCNGC 4 cut(s) 794, 836, 932, 978
FokI GGATG 4 cut(s) 554, 617, 683, 856
FriOI GRGCYC 1 cut(s) 29
Fsp4HI GCNGC 4 cut(s) 794, 836, 932, 978
FspBI CTAG 2 cut(s) 51, 699
GlaI GCGC 3 cut(s) 153, 217, 416
GluI GCNGC 4 cut(s) 794, 836, 932, 978
HaeII RGCGCY 2 cut(s) 155, 219
HaeIII GGCC 4 cut(s) 79, 100, 259, 892
HapII CCGG 8 cut(s) 80, 102, 131, 175, 339, 352, 475, 483
HhaI GCGC 3 cut(s) 154, 218, 417
Hin1I GRCGYC 2 cut(s) 152, 216
Hin1II CATG 2 cut(s) 203, 697
Hin6I GCGC 3 cut(s) 152, 216, 415
HinP1I GCGC 3 cut(s) 152, 216, 415
HincII GTYRAC 1 cut(s) 954
HindII GTYRAC 1 cut(s) 954
HindIII AAGCTT 1 cut(s) 222
HinfI GANTC 6 cut(s) 71, 127, 134, 314, 571, 1013
HpaII CCGG 8 cut(s) 80, 102, 131, 175, 339, 352, 475, 483
HphI GGTGA 1 cut(s) 649
Hpy166II GTNNAC 3 cut(s) 196, 472, 954
Hpy188I TCNGA 4 cut(s) 139, 144, 454, 651
Hpy188III TCNNGA 8 cut(s) 118, 131, 329, 339, 404, 500, 668, 788
Hpy8I GTNNAC 3 cut(s) 196, 472, 954
Hpy99I CGWCG 1 cut(s) 265
HpyAV CCTTC 2 cut(s) 313, 427
HpyCH4III ACNGT 1 cut(s) 166
HpyCH4V TGCA 6 cut(s) 37, 271, 524, 533, 622, 634
HpyF10VI GCNNNNNNNGC 3 cut(s) 256, 530, 841
HpyF3I CTNAG 3 cut(s) 28, 383, 973
Hsp92I GRCGYC 2 cut(s) 152, 216
Hsp92II CATG 2 cut(s) 203, 697
HspAI GCGC 3 cut(s) 152, 216, 415
KasI GGCGCC 2 cut(s) 151, 215
Kpn2I TCCGGA 2 cut(s) 130, 338
Kzo9I GATC 3 cut(s) 139, 712, 939
LmnI GCTCC 1 cut(s) 66
Lsp1109I GCAGC 3 cut(s) 805, 847, 989
LweI GCATC 1 cut(s) 446
MaeI CTAG 2 cut(s) 51, 699
MaeIII GTNAC 1 cut(s) 898
MalI GATC 3 cut(s) 141, 714, 941
MboI GATC 3 cut(s) 139, 712, 939
MboII GAAGA 3 cut(s) 25, 253, 386
MhlI GDGCHC 1 cut(s) 29
MluCI AATT 9 cut(s) 507, 584, 594, 783, 805, 817, 851, 1001, 1006
Mly113I GGCGCC 2 cut(s) 152, 216
MlyI GAGTC 3 cut(s) 80, 128, 1022
MmeI TCCRAC 1 cut(s) 780
MnlI CCTC 8 cut(s) 56, 85, 98, 165, 303, 390, 405, 982
MroI TCCGGA 2 cut(s) 130, 338
MseI TTAA 4 cut(s) 549, 582, 684, 1005
MspI CCGG 8 cut(s) 80, 102, 131, 175, 339, 352, 475, 483
MspR9I CCNGG 5 cut(s) 81, 102, 176, 278, 874
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 2 cut(s) 278, 874
MwoI GCNNNNNNNGC 3 cut(s) 256, 530, 841
NarI GGCGCC 2 cut(s) 152, 216
NciI CCSGG 3 cut(s) 81, 102, 176
NdeII GATC 3 cut(s) 139, 712, 939
NlaIII CATG 2 cut(s) 203, 697
NlaIV GGNNCC 4 cut(s) 153, 173, 190, 217
NspV TTCGAA 1 cut(s) 317
PaqCI CACCTGC 1 cut(s) 625
PctI GAATGC 1 cut(s) 877
PfeI GAWTC 3 cut(s) 127, 314, 571
PflMI CCANNNNNTGG 1 cut(s) 909
PinAI ACCGGT 1 cut(s) 351
PkrI GCNGC 4 cut(s) 795, 837, 933, 979
PleI GAGTC 3 cut(s) 79, 128, 1021
PluTI GGCGCC 2 cut(s) 155, 219
PpsI GAGTC 3 cut(s) 79, 128, 1021
Psp124BI GAGCTC 1 cut(s) 29
Psp6I CCWGG 2 cut(s) 276, 872
PspGI CCWGG 2 cut(s) 276, 872
PspN4I GGNNCC 4 cut(s) 153, 173, 190, 217
PspPI GGNCC 8 cut(s) 77, 99, 115, 172, 189, 257, 472, 890
SacI GAGCTC 1 cut(s) 29
SaqAI TTAA 4 cut(s) 549, 582, 684, 1005
SatI GCNGC 4 cut(s) 794, 836, 932, 978
Sau3AI GATC 3 cut(s) 139, 712, 939
Sau96I GGNCC 8 cut(s) 77, 99, 115, 172, 189, 257, 472, 890
SchI GAGTC 3 cut(s) 80, 128, 1022
ScrFI CCNGG 5 cut(s) 81, 102, 176, 278, 874
SduI GDGCHC 1 cut(s) 29
SfaNI GCATC 1 cut(s) 446
SfoI GGCGCC 2 cut(s) 153, 217
SfuI TTCGAA 1 cut(s) 317
SinI GGWCC 4 cut(s) 115, 172, 189, 472
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
Sse9I AATT 9 cut(s) 507, 584, 594, 783, 805, 817, 851, 1001, 1006
SsiI CCGC 3 cut(s) 158, 397, 932
SspDI GGCGCC 2 cut(s) 151, 215
SspMI CTAG 2 cut(s) 51, 699
SstI GAGCTC 1 cut(s) 29
StyD4I CCNGG 5 cut(s) 79, 100, 174, 276, 872
StyI CCWWGG 1 cut(s) 800
TaaI ACNGT 1 cut(s) 166
TaqI TCGA 2 cut(s) 317, 1020
TasI AATT 9 cut(s) 507, 584, 594, 783, 805, 817, 851, 1001, 1006
TauI GCSGC 1 cut(s) 934
TfiI GAWTC 3 cut(s) 127, 314, 571
Tru1I TTAA 4 cut(s) 549, 582, 684, 1005
Tru9I TTAA 4 cut(s) 549, 582, 684, 1005
TscAI CASTG 1 cut(s) 914
TseI GCWGC 3 cut(s) 793, 835, 977
TspDTI ATGAA 5 cut(s) 26, 71, 216, 299, 584
TspGWI ACGGA 3 cut(s) 139, 181, 606
TspRI CASTG 1 cut(s) 914
Van91I CCANNNNNTGG 1 cut(s) 909
VpaK11BI GGWCC 4 cut(s) 115, 172, 189, 472
XapI RAATTY 3 cut(s) 805, 817, 1001
XcmI CCANNNNNNNNNTGG 1 cut(s) 227
XspI CTAG 2 cut(s) 51, 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.