RchiOBHm_Chr1g0383351

ABC transporter B family member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0012655
Physical Location & Seq
Reverse (-)
67704060 .. 67708605
4546 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3813 bp
ATGCAGCATATGGAAAAGAAGAAACAAGCAATCGATGAGGATGTTGAGACGAAGGGAAGCTCATCCGAAACGTTGGGATTCAGTAAGCTGCTAAGCTATGCGGACGGATGGGATTGGATTATGATGGGATTGGGGACGTTGGGTTCTGTTGTCCATGGTATGGCTTTTCCAGTTGGATATCTACTGCTCGGCAGAGCACTCGATGCTTTTGGGAACAATATCAACGACACACCTGCCATGGTTAAAGCACTGAACAAGGTTATTCCATATGTGTGGTACATGGCCTTCGCCACATTTCCGGCTGGAATACTTGAAGTTGGATGCTGGATGTATTCAAGTGAAAGACAAGTGGCACGTCTAAGACTAGCATATCTAAGAGCAGTGCTCAGCCAGGAGGTTGGGGCTTTCGATACAGACTTAACCAGTGGAAAAGTGATCACCGGAATTAGTAACCACACTAGTATCATACACAGTGCAATCGGAGAGACGGTAAATATATACACTTGTATACCAGTCATTCTTGCTTTAGTTACTTACAAGTTTCTCATGATGCACTTGCAGTTGGGGCATTTTCTGTCAAGTTTCGCAACTTTCTTTTCGGGGATTTTGATTGCTGCAATATGCTGTTGGGAAGTTGCACTGCTTACCTTGTTGGTTGTTCCTTTGATTCTTGCAATCGGAGCCACTTATACTAAGAAGATGAATGCTGTCTCGGCTGCTAGGATGCTTTACCTGGCGGAAGCTACCTCTATGGTAGAACAGACCATATGTCAAATCAAAACAGTATATGCATTCGTTGGAGAAAACTCGGCAATCAAATCTTTCTCAAACTGCATGGCCAAACAGTATTTGCTAAGCAAAGGGGAGGCTCTAGTAAAGGGAGTTGGAACAGGAATGCTTCAATCTGTGACCTTCATTTCCTGGGCTATCATCATTTGGGTTGGTGCTGTTGTAGTCACTGCCAAGAGGGCAAGCGGTGGAGATATTATAGCCGCTGTCATGTGCATTCTCTTTGGAGCCATATCACTCACTTATGCTGCGCCGGACATGCAAGTCTTCAATCAAGCAAAGGCTGCAGGAACTGAAGTTTTCAAGGTGATCAATAGAAAGCCAGCTATAAGTTATGATTCACCAGGGAAGGAACTTGACAAGATTTACGGCAACATTGACATACATGGTGTTTACTTTTCCTACCCTTCCCGGCCTGACAGAGCCATCCTTCAAGGCTTTTCATTGTCAATCCCAGCAGGAAAAACTGTAGCCTTTGTGGGCAGCAGTGGCTGTGGAAAGAGTACTATCATCTCAGTAGTCGCAAGATTCTATGATCCGCCAAAAGGGAAGATTCTGATTGACAACCACAACATCAAGGATCTTGACTTGAAATTCCTGAGGAAAAACATAGGAGCTGTTTCGCAGGAACCATCACTGTTTGCAGGCACCATTGCGGACAACATGAAAGTCGGTAAGATGGATGCAGAAGATGTAGAGATCCAGAAAGCATCAGTGATGGCAAATGTACACACTTTCATATCTCAACTTCCAGATCAGTACTCCACAGAGGTAGGACAAAGGGGAGTCCAGTTATCTGGAGGCCAGAAGCAGAGAATCGCCATAGCAAGAGCCATTCTCAAGAATCCTCCTATTCTTCTGCTTGATGAGGCAACAAGTGCTCTTGACTCGGAATCTGAGAAGGTGGTTCAAGAAGCACTTGACAAGGCTATGCAAGGAAGGACAGTCATCTTGATAGCGCACAGACTATCAACTATTGTTAATGCAGATATTATTGCGGTTGTGGAAAATGGACAAGTTTCAGAAACAGGAACTCACCGGAGCTTACTTGAAAGCAGCAAATTCTACAACAACTTATTTAACATGCAGAACCTCAACCCAGTTCATGAGTCTAGAGAAGATGGTCCCTCTGAAGAACATGAAAGCATCCACCAAAAGAACTCACCTGAACAGATAACACGAGCTAAGGAGCCCCACAGCGACCAGTATCCTAATCAGCCTCCCAAGCAAGACGAAGAGGAAATAAGAAAACAAACCATATTCTTCAGAATCTGGTTTGGCTTGAAAACGAGAGAACTCGTAAAGATTGCTATTGGTTCTTTTGCAGCAGCTTTCTCTGGCATATCAAAGCCTGTCTTTGGGTATTACATTATAACAATAGGAGTAGCATACTACCACCCAGATGCTAAAAGAAAAGTCTCAAAATATTCAATCACCTTCGCTCTAATTGGATTCATTTCGTTGTTCTCTCACACCTTGCAACATTACTTCTTTGGAATGGTTGGAGAGAAGGCCATGACAAACCTGAGACGTGCTCTCTATTCAGGTGTGCTACGCAATGAAATTGGATGGTATGAGAACCCTGAGAATGGCATTGGACAGCTCACCTCAAGGATCATCAATGACACTTCAATGGTTAAACTGGTAATTGCTGACCGGATGTCTGTCATTGTTCAGTGCATCTCCTCCATACTGATTGCAACCATTGTGAGCATGGTTGTCAACTGGAGAATGGGGTTGGTAGCTTGGGCTGTGATGCCTTGCCACTTCATTGGCGGTCTCATTCAAGCCAAGTCTGCCAAGGGTTTTGCAGGAGACTCAGCTGCTGCACATAATGAACTTGTTTCTCTTGCTTCTGAGTCTGCACAAAACATAAGAACCGTTGCGTCGTTTTGCCATGAAGATCATATACTCAAAAAAGCCGAAATATCTCTGGAAACACCCAAGAGAATGAGCAGGAAAGAAAGTATCAAGTATGGCATAATTCAGGGAGTTTCTCTTTGCTTATGGAACATTGCACATGCTGTGGCATTGTGGTACACAACAGTTTTGGTTCATAAAAATCAATCGAGCTTCAAAGATGGCATAAGATCATACCAGATTTTCTCTCTCACAGTACCTTCAATCACAGAATTGTGGACATTGATTCCCACTGTCATTTCTGCCATCAATGTACTCACTCCTGCATTCGAGACCCTTGACCGCAAAACTGCAATAGATCCATCTACACCAGAAACTTCAAATTGGGACAGAATCAAAGGGAACATTGAATTTCAAAACGTTGAGTTTAATTACCCTTTGAGACCAGAAGTAAGTATCCTGAACAACTTCAGTGTACAAATTGAAGCTGGTAAAAAGGTAGCTCTTGTCGGTCCAAGTGGAGCTGGAAAATCTTCAGTTCTGGCCCTTCTGCTAAGATTTTATGATCCCTTGAAAGGTAAGATACTCATTGATGGAAAGGAGATAAGGGAATACAATTTGAGATGGCTGAGAACACAAATAGGGTTGGTGCAACAAGAGCCTCTTCTTTTTAGCTCCTCAATCAGACACAATATCTGCTACGGGAACGAAAGTGCTTCTGAAACTGAGATTGTGGAGGTATCAAAGGAAGCAAACATTGATGAGTTCATAAGTAATTTGCCTGATGGATATGAAACAGTTGTCGGGGAGAAGGGATGCCAACTTTCAGGAGGACAAAAGCAAAGAATAGCCATAGCTAGAACACTGCTAAAGAGGCCTGCAATTTTGCTTCTGGATGAAGCAACAAGTGCCCTTGATGCTGAATCTGAGAAATCTGTGGTGAGTGCATTGGAAGCGATAAATTTGAAAAAGAATGGGGGCCTGCTGTCAAAAACCACACAGATTACAGTTGCACATAGGCTTTCCACAATAATAAAGTCGGATATCATTGTTGTCATGGACAAAGGTGAGATTGTGGAGATGGGATCCCACTCAACCCTAATAACAGCATCTGAGGGAGTTTATTCAAGATTATATCAGATACAGAGCATGGGAGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226
Pfam Domains
Protein Families
ABC_membrane ABC_tran

Protein Analysis

1270

Amino Acids

139.46

Weight (kDa)

7.99

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 43 - 167 3.6e-17 ABC transporter transmembrane region
ABC_membrane PF00664 185 - 338 5.8e-19 ABC transporter transmembrane region
SMC_N PF02463 331 - 598 2.8e-06 RecF/RecN/SMC N terminal domain
ABC_tran PF00005 407 - 556 3.1e-34 ABC transporter
ABC_membrane PF00664 701 - 963 4.1e-46 ABC transporter transmembrane region
ABC_tran PF00005 1037 - 1186 1.9e-34 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012655)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g32300 FvH4_7g32320 FvH4_7g33380
malus_domestica MD01G1232000.v1.1 MD01G1232100.v1.1
prunus_persica Prupe.2G322600_v2.0.a1
pyrus_communis pycom01g24050
rosa_chinensis RchiOBHm_Chr1g0383351
rosa_laevigata RLG00000026110
rosa_multiflora Rmu_sc0007173.1_g000013
rosa_roxburghii Rroxscaffold_4G00277370
rosa_rugosa Rorug01G0440700
rosa_samantha Rh1AG466600 Rh1BG423900 Rh1BG424000 Rh1CG437100 Rh1DG456600 Rh1DG456700
rosa_wichuraiana Rw1G040590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2162
AarI CACCTGC 1 cut(s) 241
AasI GACNNNNNNGTC 1 cut(s) 1052
Acc36I ACCTGC 1 cut(s) 241
AccB1I GGYRCC 1 cut(s) 1436
AccB7I CCANNNNNTGG 1 cut(s) 160
AccI GTMKAC 1 cut(s) 508
AciI CCGC 9 cut(s) 101, 737, 975, 993, 1328, 1445, 1787, 2565, 2992
AclI AACGTT 2 cut(s) 71, 3069
AclWI GGATC 8 cut(s) 1319, 1377, 1483, 2411, 3002, 3209, 3729, 3742
AcoI YGGCCR 1 cut(s) 837
AcsI RAATTY 4 cut(s) 1382, 1850, 3059, 3610
AcuI CTGAAG 5 cut(s) 1104, 1941, 2038, 3103, 3168
AfaI GTAC 8 cut(s) 278, 1294, 1518, 1550, 2828, 2907, 2964, 3126
AfiI CCNNNNNNNGG 5 cut(s) 160, 1334, 2147, 2378, 3224
AhdI GACNNNNNGTC 2 cut(s) 768, 2449
AhlI ACTAGT 1 cut(s) 458
AjiI CACGTC 2 cut(s) 356, 2321
AjnI CCWGG 4 cut(s) 390, 732, 920, 1132
AloI GAACNNNNNNTCC 2 cut(s) 127, 159
Alw21I GWGCWC 4 cut(s) 199, 387, 1672, 2326
Alw26I GTCTC 9 cut(s) 41, 479, 715, 2212, 2311, 2573, 2598, 2975, 3085
AlwI GGATC 8 cut(s) 1319, 1377, 1483, 2411, 3002, 3209, 3729, 3742
AlwNI CAGNNNCTG 5 cut(s) 1082, 1281, 2061, 2615, 3761
AoxI GGCC 8 cut(s) 282, 837, 1202, 1591, 2301, 3192, 3524, 3628
ApoI RAATTY 4 cut(s) 1382, 1850, 3059, 3610
Asp700I GAANNNNTTC 2 cut(s) 3116, 3181
AspLEI GCGC 2 cut(s) 1042, 1750
AspS9I GGNCC 4 cut(s) 1913, 3161, 3193, 3628
AsuC2I CCSGG 1 cut(s) 1201
AsuHPI GGTGA 9 cut(s) 430, 1108, 1122, 1817, 1944, 2215, 2386, 3601, 3728
AvaII GGWCC 2 cut(s) 1913, 3161
AxyI CCTNAGG 1 cut(s) 1388
BaeGI GKGCMC 1 cut(s) 3562
BaeI ACNNNNGTAYC 2 cut(s) 445, 478
BalI TGGCCA 1 cut(s) 839
BamHI GGATCC 1 cut(s) 3734
BanI GGYRCC 1 cut(s) 1436
BanII GRGCYC 1 cut(s) 1983
BarI GAAGNNNNNNTAC 4 cut(s) 269, 301, 2682, 2714
BauI CACGAG 1 cut(s) 1968
BbsI GAAGAC 1 cut(s) 1048
Bbv12I GWGCWC 4 cut(s) 199, 387, 1672, 2326
BceAI ACGGC 1 cut(s) 1174
BcgI CGANNNNNNTGC 4 cut(s) 181, 215, 215, 249
BciT130I CCWGG 4 cut(s) 392, 734, 922, 1134
BciVI GTATCC 2 cut(s) 2007, 3116
BclI TGATCA 2 cut(s) 435, 1098
BcnI CCSGG 1 cut(s) 1201
BcoDI GTCTC 9 cut(s) 41, 479, 715, 2212, 2311, 2573, 2598, 2975, 3085
BcuI ACTAGT 1 cut(s) 458
BfaI CTAG 6 cut(s) 365, 459, 720, 872, 1902, 3507
BfmI CTRYAG 2 cut(s) 1074, 1257
BfuAI ACCTGC 1 cut(s) 241
BfuI GTATCC 2 cut(s) 2007, 3116
BglI GCCNNNNNGGC 1 cut(s) 968
BlpI GCTNAGC 3 cut(s) 92, 386, 854
BmcAI AGTACT 2 cut(s) 1294, 1550
Bme1390I CCNGG 5 cut(s) 392, 734, 922, 1134, 1201
Bme18I GGWCC 2 cut(s) 1913, 3161
BmeRI GACNNNNNGTC 2 cut(s) 768, 2449
BmgBI CACGTC 2 cut(s) 356, 2321
BmgT120I GGNCC 4 cut(s) 1913, 3161, 3193, 3628
BmiI GGNNCC 8 cut(s) 682, 1018, 1419, 1438, 1915, 1980, 3629, 3736
BmrFI CCNGG 5 cut(s) 392, 734, 922, 1134, 1201
BmrI ACTGGG 1 cut(s) 1883
BmuI ACTGGG 1 cut(s) 1883
BpiI GAAGAC 1 cut(s) 1048
BplI GAGNNNNNCTC 6 cut(s) 369, 401, 1611, 1643, 2308, 2340
BpmI CTGGAG 2 cut(s) 1608, 2536
Bpu10I CCTNAGC 1 cut(s) 1974
Bpu1102I GCTNAGC 3 cut(s) 92, 386, 854
BpuEI CTTGAG 2 cut(s) 1613, 2383
BpuMI CCSGG 1 cut(s) 1201
Bsa29I ATCGAT 1 cut(s) 33
BsaI GGTCTC 3 cut(s) 2573, 2975, 3085
BsaJI CCNNGG 5 cut(s) 154, 237, 921, 1133, 2589
BsaWI WCCGGW 3 cut(s) 440, 1827, 2445
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 5 cut(s) 160, 1334, 2147, 2378, 3224
Bse1I ACTGG 8 cut(s) 170, 423, 512, 1579, 1889, 1993, 2436, 2519
Bse21I CCTNAGG 1 cut(s) 1388
Bse3DI GCAATG 3 cut(s) 1440, 2353, 2802
BseBI CCWGG 4 cut(s) 392, 734, 922, 1134
BseCI ATCGAT 1 cut(s) 33
BseDI CCNNGG 5 cut(s) 154, 237, 921, 1133, 2589
BseLI CCNNNNNNNGG 5 cut(s) 160, 1334, 2147, 2378, 3224
BseMI GCAATG 3 cut(s) 1440, 2353, 2802
BseNI ACTGG 8 cut(s) 170, 423, 512, 1579, 1889, 1993, 2436, 2519
BseRI GAGGAG 2 cut(s) 2464, 3316
BseSI GKGCMC 1 cut(s) 3562
BseYI CCCAGC 1 cut(s) 1243
BsgI GTGCAG 2 cut(s) 2601, 2637
BshFI GGCC 8 cut(s) 284, 839, 1204, 1593, 2303, 3194, 3526, 3630
BshNI GGYRCC 1 cut(s) 1436
BshVI ATCGAT 1 cut(s) 33
BsiHKAI GWGCWC 4 cut(s) 199, 387, 1672, 2326
BsiSI CCGG 6 cut(s) 299, 441, 1043, 1201, 1828, 2446
BslFI GGGAC 3 cut(s) 148, 1899, 3050
BslI CCNNNNNNNGG 5 cut(s) 160, 1334, 2147, 2378, 3224
BsmAI GTCTC 9 cut(s) 41, 479, 715, 2212, 2311, 2573, 2598, 2975, 3085
BsmBI CGTCTC 3 cut(s) 41, 479, 2311
BsmFI GGGAC 3 cut(s) 148, 1899, 3050
BsmI GAATGC 5 cut(s) 709, 791, 900, 1005, 2975
BsnI GGCC 8 cut(s) 284, 839, 1204, 1593, 2303, 3194, 3526, 3630
Bso31I GGTCTC 3 cut(s) 2573, 2975, 3085
Bsp1286I GDGCHC 6 cut(s) 199, 387, 1672, 1983, 2326, 3562
Bsp1407I TGTACA 2 cut(s) 1516, 3124
Bsp1720I GCTNAGC 3 cut(s) 92, 386, 854
Bsp19I CCATGG 2 cut(s) 154, 237
BspACI CCGC 9 cut(s) 101, 737, 975, 993, 1328, 1445, 1787, 2565, 2992
BspANI GGCC 8 cut(s) 284, 839, 1204, 1593, 2303, 3194, 3526, 3630
BspDI ATCGAT 1 cut(s) 33
BspHI TCATGA 2 cut(s) 546, 1894
BspLI GGNNCC 8 cut(s) 682, 1018, 1419, 1438, 1915, 1980, 3629, 3736
BspMAI CTGCAG 1 cut(s) 1078
BspMI ACCTGC 1 cut(s) 241
BspPI GGATC 8 cut(s) 1319, 1377, 1483, 2411, 3002, 3209, 3729, 3742
BspT107I GGYRCC 1 cut(s) 1436
BspTNI GGTCTC 3 cut(s) 2573, 2975, 3085
BsrDI GCAATG 3 cut(s) 1440, 2353, 2802
BsrGI TGTACA 2 cut(s) 1516, 3124
BsrI ACTGG 8 cut(s) 170, 423, 512, 1579, 1889, 1993, 2436, 2519
BssECI CCNNGG 5 cut(s) 154, 237, 921, 1133, 2589
BssNAI GTATAC 1 cut(s) 509
BssSI CACGAG 1 cut(s) 1968
BssT1I CCWWGG 3 cut(s) 154, 237, 2589
Bst1107I GTATAC 1 cut(s) 509
Bst2BI CACGAG 1 cut(s) 1968
Bst2UI CCWGG 4 cut(s) 392, 734, 922, 1134
Bst6I CTCTTC 3 cut(s) 2019, 3318, 3801
BstAPI GCANNNNNTGC 4 cut(s) 203, 1073, 1667, 3557
BstAUI TGTACA 2 cut(s) 1516, 3124
BstC8I GCNNGC 5 cut(s) 973, 1113, 1435, 3528, 3632
BstDSI CCRYGG 2 cut(s) 154, 237
BstHHI GCGC 2 cut(s) 1042, 1750
BstMAI GTCTC 9 cut(s) 41, 479, 715, 2212, 2311, 2573, 2598, 2975, 3085
BstNI CCWGG 4 cut(s) 392, 734, 922, 1134
BstNSI RCATGY 3 cut(s) 1051, 1876, 2813
BstSCI CCNGG 5 cut(s) 390, 732, 920, 1132, 1199
BstSFI CTRYAG 2 cut(s) 1074, 1257
BstSLI GKGCMC 1 cut(s) 3562
BstV2I GAAGAC 1 cut(s) 1048
BstX2I RGATCY 4 cut(s) 1369, 1488, 3007, 3734
BstXI CCANNNNNNTGG 4 cut(s) 273, 398, 1586, 2561
BstYI RGATCY 4 cut(s) 1369, 1488, 3007, 3734
BstZ17I GTATAC 1 cut(s) 509
Bsu15I ATCGAT 1 cut(s) 33
Bsu36I CCTNAGG 1 cut(s) 1388
BsuI GTATCC 2 cut(s) 2007, 3116
BsuRI GGCC 8 cut(s) 284, 839, 1204, 1593, 2303, 3194, 3526, 3630
BsuTUI ATCGAT 1 cut(s) 33
BtgI CCRYGG 2 cut(s) 154, 237
BtrI CACGTC 2 cut(s) 356, 2321
BtsI GCAGTG 5 cut(s) 387, 638, 957, 1282, 3512
BveI ACCTGC 1 cut(s) 241
Cac8I GCNNGC 5 cut(s) 973, 1113, 1435, 3528, 3632
CaiI CAGNNNCTG 5 cut(s) 1082, 1281, 2061, 2615, 3761
CciI TCATGA 2 cut(s) 546, 1894
CfoI GCGC 2 cut(s) 1042, 1750
Cfr13I GGNCC 4 cut(s) 1913, 3161, 3193, 3628
ClaI ATCGAT 1 cut(s) 33
CseI GACGC 1 cut(s) 2664
Csp6I GTAC 8 cut(s) 277, 1293, 1517, 1549, 2827, 2906, 2963, 3125
CviQI GTAC 8 cut(s) 277, 1293, 1517, 1549, 2827, 2906, 2963, 3125
DrdI GACNNNNNNGTC 1 cut(s) 1052
DriI GACNNNNNGTC 2 cut(s) 768, 2449
DseDI GACNNNNNNGTC 1 cut(s) 1052
EaeI YGGCCR 1 cut(s) 837
Eam1104I CTCTTC 3 cut(s) 2019, 3318, 3801
Eam1105I GACNNNNNGTC 2 cut(s) 768, 2449
EarI CTCTTC 3 cut(s) 2019, 3318, 3801
EciI GGCGGA 2 cut(s) 752, 1317
Eco130I CCWWGG 3 cut(s) 154, 237, 2589
Eco147I AGGCCT 1 cut(s) 3526
Eco24I GRGCYC 1 cut(s) 1983
Eco31I GGTCTC 3 cut(s) 2573, 2975, 3085
Eco32I GATATC 2 cut(s) 179, 3694
Eco47I GGWCC 2 cut(s) 1913, 3161
Eco57I CTGAAG 5 cut(s) 1104, 1941, 2038, 3103, 3168
Eco81I CCTNAGG 1 cut(s) 1388
EcoO109I RGGNCCY 1 cut(s) 3628
EcoRII CCWGG 4 cut(s) 390, 732, 920, 1132
EcoRV GATATC 2 cut(s) 179, 3694
EcoT14I CCWWGG 3 cut(s) 154, 237, 2589
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 1 cut(s) 1983
ErhI CCWWGG 3 cut(s) 154, 237, 2589
Esp3I CGTCTC 3 cut(s) 41, 479, 2311
FalI AAGNNNNNCTT 6 cut(s) 1692, 1724, 2129, 2161, 3297, 3329
FaqI GGGAC 3 cut(s) 148, 1899, 3050
FauNDI CATATG 3 cut(s) 9, 268, 767
FbaI TGATCA 2 cut(s) 435, 1098
FblI GTMKAC 1 cut(s) 508
FriOI GRGCYC 1 cut(s) 1983
FspBI CTAG 6 cut(s) 365, 459, 720, 872, 1902, 3507
GlaI GCGC 2 cut(s) 1041, 1749
GsaI CCCAGC 1 cut(s) 1247
GsuI CTGGAG 2 cut(s) 1608, 2536
HaeIII GGCC 8 cut(s) 284, 839, 1204, 1593, 2303, 3194, 3526, 3630
HapII CCGG 6 cut(s) 299, 441, 1043, 1201, 1828, 2446
HgaI GACGC 1 cut(s) 2664
HhaI GCGC 2 cut(s) 1042, 1750
Hin6I GCGC 2 cut(s) 1040, 1748
HinP1I GCGC 2 cut(s) 1040, 1748
HincII GTYRAC 1 cut(s) 2512
HindII GTYRAC 1 cut(s) 2512
HpaII CCGG 6 cut(s) 299, 441, 1043, 1201, 1828, 2446
HphI GGTGA 9 cut(s) 430, 1108, 1122, 1817, 1944, 2215, 2386, 3601, 3728
Hpy166II GTNNAC 7 cut(s) 509, 1183, 1519, 2512, 2829, 2928, 3125
Hpy8I GTNNAC 7 cut(s) 509, 1183, 1519, 2512, 2829, 2928, 3125
Hpy99I CGWCG 1 cut(s) 2680
HpyCH4IV ACGT 5 cut(s) 71, 137, 355, 2320, 3069
HpySE526I ACGT 5 cut(s) 71, 137, 355, 2320, 3069
HspAI GCGC 2 cut(s) 1040, 1748
Ksp22I TGATCA 2 cut(s) 435, 1098
LmnI GCTCC 7 cut(s) 680, 1016, 1403, 1830, 1978, 3170, 3329
MaeI CTAG 6 cut(s) 365, 459, 720, 872, 1902, 3507
MaeII ACGT 5 cut(s) 71, 137, 355, 2320, 3069
MaeIII GTNAC 4 cut(s) 449, 529, 907, 955
MflI RGATCY 4 cut(s) 1369, 1488, 3007, 3734
MhlI GDGCHC 6 cut(s) 199, 387, 1672, 1983, 2326, 3562
MlsI TGGCCA 1 cut(s) 839
MluNI TGGCCA 1 cut(s) 839
MlyI GAGTC 5 cut(s) 1584, 1670, 1907, 2600, 2657
MmeI TCCRAC 6 cut(s) 154, 298, 778, 865, 2272, 3669
Mox20I TGGCCA 1 cut(s) 839
Mph1103I ATGCAT 1 cut(s) 793
MroXI GAANNNNTTC 2 cut(s) 3116, 3181
MscI TGGCCA 1 cut(s) 839
MseI TTAA 6 cut(s) 243, 419, 1770, 1869, 2427, 3078
MslI CAYNNNNRTG 3 cut(s) 271, 2190, 2420
Msp20I TGGCCA 1 cut(s) 839
MspA1I CMGCKG 2 cut(s) 995, 2612
MspI CCGG 6 cut(s) 299, 441, 1043, 1201, 1828, 2446
MspR9I CCNGG 5 cut(s) 392, 734, 922, 1134, 1201
Mva1269I GAATGC 5 cut(s) 709, 791, 900, 1005, 2975
MvaI CCWGG 4 cut(s) 392, 734, 922, 1134
NciI CCSGG 1 cut(s) 1201
NcoI CCATGG 2 cut(s) 154, 237
NdeI CATATG 3 cut(s) 9, 268, 767
NlaIV GGNNCC 8 cut(s) 682, 1018, 1419, 1438, 1915, 1980, 3629, 3736
NmeAIII GCCGAG 3 cut(s) 168, 692, 788
NmuCI GTSAC 2 cut(s) 907, 955
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 3 cut(s) 1051, 1876, 2813
PagI TCATGA 2 cut(s) 546, 1894
PaqCI CACCTGC 1 cut(s) 241
PceI AGGCCT 1 cut(s) 3526
PctI GAATGC 5 cut(s) 709, 791, 900, 1005, 2975
PdmI GAANNNNTTC 2 cut(s) 3116, 3181
PflMI CCANNNNNTGG 1 cut(s) 160
PleI GAGTC 5 cut(s) 1583, 1670, 1906, 2600, 2656
PpsI GAGTC 5 cut(s) 1583, 1670, 1906, 2600, 2656
PsiI TTATAA 1 cut(s) 2162
Psp1406I AACGTT 2 cut(s) 71, 3069
Psp6I CCWGG 4 cut(s) 390, 732, 920, 1132
PspFI CCCAGC 1 cut(s) 1243
PspGI CCWGG 4 cut(s) 390, 732, 920, 1132
PspN4I GGNNCC 8 cut(s) 682, 1018, 1419, 1438, 1915, 1980, 3629, 3736
PspPI GGNCC 4 cut(s) 1913, 3161, 3193, 3628
PstI CTGCAG 1 cut(s) 1078
PstNI CAGNNNCTG 5 cut(s) 1082, 1281, 2061, 2615, 3761
PsuI RGATCY 4 cut(s) 1369, 1488, 3007, 3734
PvuII CAGCTG 1 cut(s) 2612
RsaI GTAC 8 cut(s) 278, 1294, 1518, 1550, 2828, 2907, 2964, 3126
RsaNI GTAC 8 cut(s) 277, 1293, 1517, 1549, 2827, 2906, 2963, 3125
RseI CAYNNNNRTG 3 cut(s) 271, 2190, 2420
SaqAI TTAA 6 cut(s) 243, 419, 1770, 1869, 2427, 3078
Sau96I GGNCC 4 cut(s) 1913, 3161, 3193, 3628
ScaI AGTACT 2 cut(s) 1294, 1550
SchI GAGTC 5 cut(s) 1584, 1670, 1907, 2600, 2657
ScrFI CCNGG 5 cut(s) 392, 734, 922, 1134, 1201
SduI GDGCHC 6 cut(s) 199, 387, 1672, 1983, 2326, 3562
SfcI CTRYAG 2 cut(s) 1074, 1257
SinI GGWCC 2 cut(s) 1913, 3161
SmiMI CAYNNNNRTG 3 cut(s) 271, 2190, 2420
SmlI CTYRAG 2 cut(s) 1628, 2398
SmoI CTYRAG 2 cut(s) 1628, 2398
SpeI ACTAGT 1 cut(s) 458
SseBI AGGCCT 1 cut(s) 3526
SsiI CCGC 9 cut(s) 101, 737, 975, 993, 1328, 1445, 1787, 2565, 2992
SspI AATATT 1 cut(s) 2216
SspMI CTAG 6 cut(s) 365, 459, 720, 872, 1902, 3507
StuI AGGCCT 1 cut(s) 3526
StyD4I CCNGG 5 cut(s) 390, 732, 920, 1132, 1199
StyI CCWWGG 3 cut(s) 154, 237, 2589
TaiI ACGT 5 cut(s) 74, 140, 358, 2323, 3072
TaqI TCGA 5 cut(s) 33, 201, 408, 2858, 2979
TaqII GACCGA 1 cut(s) 3149
TatI WGTACW 5 cut(s) 1292, 1516, 1548, 2962, 3124
TauI GCSGC 1 cut(s) 995
Tru1I TTAA 6 cut(s) 243, 419, 1770, 1869, 2427, 3078
Tru9I TTAA 6 cut(s) 243, 419, 1770, 1869, 2427, 3078
TseFI GTSAC 2 cut(s) 907, 955
Tsp45I GTSAC 2 cut(s) 907, 955
TspGWI ACGGA 1 cut(s) 120
Van91I CCANNNNNTGG 1 cut(s) 160
VpaK11BI GGWCC 2 cut(s) 1913, 3161
XapI RAATTY 4 cut(s) 1382, 1850, 3059, 3610
XbaI TCTAGA 1 cut(s) 1901
XceI RCATGY 3 cut(s) 1051, 1876, 2813
XcmI CCANNNNNNNNNTGG 1 cut(s) 2500
XmiI GTMKAC 1 cut(s) 508
XmnI GAANNNNTTC 2 cut(s) 3116, 3181
XspI CTAG 6 cut(s) 365, 459, 720, 872, 1902, 3507
ZrmI AGTACT 2 cut(s) 1294, 1550
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.