Carotenoid 9,10(9',10')-cleavage dioxygenase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G63520 |
| fragaria_vesca | FvH4_7g01130 FvH4_7g01130 FvH4_7g01130 |
| malus_domestica | MD02G1309700.v1.1 MD07G1011500.v1.1 |
| prunus_persica | Prupe.2G014700_v2.0.a1 Prupe.2G014700_v2.0.a1 |
| pyrus_communis | pycom02g26070 pycom02g26080 pycom07g00960 |
| rosa_chinensis | RchiOBHm_Chr1g0316181 RchiOBHm_Chr1g0316311 |
| rosa_laevigata | RLG00000030681 RLG00000030689 |
| rosa_multiflora | Rmu_sc0002531.1_g000009 Rmu_sc0008559.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00331080 Rroxscaffold_4G00331110 |
| rosa_rugosa | Rorug01G0009600 |
| rosa_samantha | Rh1AG019400 Rh1BG014400 Rh1DG014400 |
| rosa_wichuraiana | Rw1G001300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 113 |
| AccB1I | GGYRCC | 1 cut(s) | 314 |
| AciI | CCGC | 2 cut(s) | 235, 268 |
| AclWI | GGATC | 5 cut(s) | 245, 629, 680, 771, 1382 |
| AcoI | YGGCCR | 1 cut(s) | 121 |
| AcsI | RAATTY | 1 cut(s) | 320 |
| AcuI | CTGAAG | 1 cut(s) | 987 |
| AfaI | GTAC | 6 cut(s) | 32, 305, 705, 950, 1326, 1362 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 191, 602, 987, 1181 |
| AflII | CTTAAG | 2 cut(s) | 290, 341 |
| AgeI | ACCGGT | 1 cut(s) | 1016 |
| AgsI | TTSAA | 4 cut(s) | 142, 562, 666, 1006 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 285 |
| AjiI | CACGTC | 1 cut(s) | 287 |
| AjnI | CCWGG | 3 cut(s) | 1230, 1237, 1279 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 291, 323 |
| Alw26I | GTCTC | 3 cut(s) | 268, 330, 477 |
| AlwI | GGATC | 5 cut(s) | 245, 629, 680, 771, 1382 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 382 |
| AoxI | GGCC | 3 cut(s) | 121, 163, 978 |
| ApeKI | GCWGC | 3 cut(s) | 376, 379, 1169 |
| ApoI | RAATTY | 1 cut(s) | 320 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1364, 1396 |
| AsiGI | ACCGGT | 1 cut(s) | 1016 |
| AspA2I | CCTAGG | 1 cut(s) | 1064 |
| AspS9I | GGNCC | 4 cut(s) | 106, 164, 979, 1235 |
| AsuC2I | CCSGG | 1 cut(s) | 185 |
| AsuHPI | GGTGA | 4 cut(s) | 41, 443, 1081, 1150 |
| AvaII | GGWCC | 2 cut(s) | 106, 1235 |
| AvrII | CCTAGG | 1 cut(s) | 1064 |
| AxyI | CCTNAGG | 1 cut(s) | 1176 |
| BanI | GGYRCC | 1 cut(s) | 314 |
| BbvI | GCAGC | 3 cut(s) | 388, 391, 1156 |
| BccI | CCATC | 8 cut(s) | 132, 203, 209, 239, 509, 665, 885, 1298 |
| BciT130I | CCWGG | 3 cut(s) | 1232, 1239, 1281 |
| BcnI | CCSGG | 1 cut(s) | 185 |
| BcoDI | GTCTC | 3 cut(s) | 268, 330, 477 |
| BfaI | CTAG | 3 cut(s) | 467, 1065, 1364 |
| BfrI | CTTAAG | 2 cut(s) | 290, 341 |
| BglII | AGATCT | 1 cut(s) | 520 |
| BisI | GCNGC | 3 cut(s) | 377, 380, 1170 |
| BlnI | CCTAGG | 1 cut(s) | 1064 |
| BlsI | GCNGC | 3 cut(s) | 378, 381, 1171 |
| BmcAI | AGTACT | 1 cut(s) | 305 |
| Bme1390I | CCNGG | 4 cut(s) | 185, 1232, 1239, 1281 |
| Bme18I | GGWCC | 2 cut(s) | 106, 1235 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 285 |
| BmgBI | CACGTC | 1 cut(s) | 287 |
| BmgT120I | GGNCC | 4 cut(s) | 106, 164, 979, 1235 |
| BmiI | GGNNCC | 6 cut(s) | 166, 316, 981, 1114, 1236, 1433 |
| BmrFI | CCNGG | 4 cut(s) | 185, 1232, 1239, 1281 |
| BmrI | ACTGGG | 1 cut(s) | 612 |
| BmsI | GCATC | 2 cut(s) | 711, 1357 |
| BmuI | ACTGGG | 1 cut(s) | 612 |
| BpuMI | CCSGG | 1 cut(s) | 185 |
| BsaBI | GATNNNNATC | 1 cut(s) | 519 |
| BsaI | GGTCTC | 1 cut(s) | 330 |
| BsaJI | CCNNGG | 5 cut(s) | 183, 454, 1064, 1216, 1231 |
| BsaWI | WCCGGW | 2 cut(s) | 76, 1016 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 138, 168, 1197, 1227 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 191, 602, 987, 1181 |
| Bse118I | RCCGGY | 1 cut(s) | 1016 |
| Bse1I | ACTGG | 6 cut(s) | 206, 607, 1090, 1125, 1345, 1383 |
| Bse21I | CCTNAGG | 1 cut(s) | 1176 |
| Bse8I | GATNNNNATC | 1 cut(s) | 519 |
| BseBI | CCWGG | 3 cut(s) | 1232, 1239, 1281 |
| BseDI | CCNNGG | 5 cut(s) | 183, 454, 1064, 1216, 1231 |
| BseGI | GGATG | 4 cut(s) | 250, 580, 676, 880 |
| BseJI | GATNNNNATC | 1 cut(s) | 519 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 191, 602, 987, 1181 |
| BseMII | CTCAG | 5 cut(s) | 56, 374, 732, 1167, 1245 |
| BseNI | ACTGG | 6 cut(s) | 206, 607, 1090, 1125, 1345, 1383 |
| BseRI | GAGGAG | 1 cut(s) | 1469 |
| BseXI | GCAGC | 3 cut(s) | 388, 391, 1156 |
| BsgI | GTGCAG | 1 cut(s) | 1155 |
| BshFI | GGCC | 3 cut(s) | 123, 165, 980 |
| BshNI | GGYRCC | 1 cut(s) | 314 |
| BshTI | ACCGGT | 1 cut(s) | 1016 |
| BsiSI | CCGG | 3 cut(s) | 77, 185, 1017 |
| BslFI | GGGAC | 3 cut(s) | 439, 1248, 1253 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 191, 602, 987, 1181 |
| BsmAI | GTCTC | 3 cut(s) | 268, 330, 477 |
| BsmFI | GGGAC | 3 cut(s) | 439, 1248, 1253 |
| BsmI | GAATGC | 1 cut(s) | 565 |
| BsnI | GGCC | 3 cut(s) | 123, 165, 980 |
| Bso31I | GGTCTC | 1 cut(s) | 330 |
| Bsp1407I | TGTACA | 1 cut(s) | 1324 |
| Bsp143I | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| Bsp19I | CCATGG | 1 cut(s) | 454 |
| BspACI | CCGC | 2 cut(s) | 235, 268 |
| BspANI | GGCC | 3 cut(s) | 123, 165, 980 |
| BspCNI | CTCAG | 5 cut(s) | 55, 375, 733, 1168, 1246 |
| BspHI | TCATGA | 1 cut(s) | 717 |
| BspLI | GGNNCC | 6 cut(s) | 166, 316, 981, 1114, 1236, 1433 |
| BspPI | GGATC | 5 cut(s) | 245, 629, 680, 771, 1382 |
| BspT107I | GGYRCC | 1 cut(s) | 314 |
| BspTI | CTTAAG | 2 cut(s) | 290, 341 |
| BspTNI | GGTCTC | 1 cut(s) | 330 |
| BsrFI | RCCGGY | 1 cut(s) | 1016 |
| BsrGI | TGTACA | 1 cut(s) | 1324 |
| BsrI | ACTGG | 6 cut(s) | 206, 607, 1090, 1125, 1345, 1383 |
| BssAI | RCCGGY | 1 cut(s) | 1016 |
| BssECI | CCNNGG | 5 cut(s) | 183, 454, 1064, 1216, 1231 |
| BssMI | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| BssT1I | CCWWGG | 3 cut(s) | 454, 1064, 1216 |
| Bst2UI | CCWGG | 3 cut(s) | 1232, 1239, 1281 |
| Bst4CI | ACNGT | 3 cut(s) | 38, 532, 703 |
| Bst6I | CTCTTC | 1 cut(s) | 294 |
| BstAFI | CTTAAG | 2 cut(s) | 290, 341 |
| BstAUI | TGTACA | 1 cut(s) | 1324 |
| BstC8I | GCNNGC | 3 cut(s) | 809, 844, 1167 |
| BstDEI | CTNAG | 7 cut(s) | 42, 102, 383, 741, 1176, 1254, 1476 |
| BstDSI | CCRYGG | 1 cut(s) | 454 |
| BstF5I | GGATG | 4 cut(s) | 250, 580, 676, 880 |
| BstKTI | GATC | 7 cut(s) | 240, 523, 637, 688, 766, 1162, 1390 |
| BstMAI | GTCTC | 3 cut(s) | 268, 330, 477 |
| BstMBI | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 188, 935 |
| BstNI | CCWGG | 3 cut(s) | 1232, 1239, 1281 |
| BstNSI | RCATGY | 2 cut(s) | 376, 1169 |
| BstSCI | CCNGG | 4 cut(s) | 183, 1230, 1237, 1279 |
| BstV1I | GCAGC | 3 cut(s) | 388, 391, 1156 |
| BstX2I | RGATCY | 2 cut(s) | 520, 763 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 929 |
| BstYI | RGATCY | 2 cut(s) | 520, 763 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1176 |
| BsuRI | GGCC | 3 cut(s) | 123, 165, 980 |
| BtgI | CCRYGG | 1 cut(s) | 454 |
| BtrI | CACGTC | 1 cut(s) | 287 |
| BtsCI | GGATG | 4 cut(s) | 250, 580, 676, 880 |
| BtsI | GCAGTG | 1 cut(s) | 573 |
| BtsIMutI | CAGTG | 6 cut(s) | 199, 573, 600, 1083, 1118, 1390 |
| Cac8I | GCNNGC | 3 cut(s) | 809, 844, 1167 |
| CaiI | CAGNNNCTG | 1 cut(s) | 382 |
| CciI | TCATGA | 1 cut(s) | 717 |
| Cfr10I | RCCGGY | 1 cut(s) | 1016 |
| Cfr13I | GGNCC | 4 cut(s) | 106, 164, 979, 1235 |
| CsiI | ACCWGGT | 1 cut(s) | 1237 |
| Csp6I | GTAC | 6 cut(s) | 31, 304, 704, 949, 1325, 1361 |
| CspAI | ACCGGT | 1 cut(s) | 1016 |
| CviQI | GTAC | 6 cut(s) | 31, 304, 704, 949, 1325, 1361 |
| DdeI | CTNAG | 7 cut(s) | 42, 102, 383, 741, 1176, 1254, 1476 |
| DpnI | GATC | 7 cut(s) | 239, 522, 636, 687, 765, 1161, 1389 |
| DpnII | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 113 |
| DriI | GACNNNNNGTC | 1 cut(s) | 285 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 113 |
| EaeI | YGGCCR | 1 cut(s) | 121 |
| Eam1104I | CTCTTC | 1 cut(s) | 294 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 285 |
| EarI | CTCTTC | 1 cut(s) | 294 |
| Eco130I | CCWWGG | 3 cut(s) | 454, 1064, 1216 |
| Eco31I | GGTCTC | 1 cut(s) | 330 |
| Eco32I | GATATC | 1 cut(s) | 197 |
| Eco47I | GGWCC | 2 cut(s) | 106, 1235 |
| Eco57I | CTGAAG | 1 cut(s) | 987 |
| Eco81I | CCTNAGG | 1 cut(s) | 1176 |
| EcoO109I | RGGNCCY | 2 cut(s) | 106, 1235 |
| EcoRII | CCWGG | 3 cut(s) | 1230, 1237, 1279 |
| EcoRV | GATATC | 1 cut(s) | 197 |
| EcoT14I | CCWWGG | 3 cut(s) | 454, 1064, 1216 |
| EcoT22I | ATGCAT | 2 cut(s) | 684, 726 |
| ErhI | CCWWGG | 3 cut(s) | 454, 1064, 1216 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 554, 586 |
| FaqI | GGGAC | 3 cut(s) | 439, 1248, 1253 |
| FauI | CCCGC | 1 cut(s) | 275 |
| FauNDI | CATATG | 4 cut(s) | 259, 415, 643, 1426 |
| Fnu4HI | GCNGC | 3 cut(s) | 377, 380, 1170 |
| FokI | GGATG | 4 cut(s) | 257, 567, 683, 887 |
| Fsp4HI | GCNGC | 3 cut(s) | 377, 380, 1170 |
| FspBI | CTAG | 3 cut(s) | 467, 1065, 1364 |
| GluI | GCNGC | 3 cut(s) | 377, 380, 1170 |
| HaeIII | GGCC | 3 cut(s) | 123, 165, 980 |
| HapII | CCGG | 3 cut(s) | 77, 185, 1017 |
| HincII | GTYRAC | 1 cut(s) | 592 |
| HindII | GTYRAC | 1 cut(s) | 592 |
| HinfI | GANTC | 3 cut(s) | 223, 1002, 1046 |
| HpaII | CCGG | 3 cut(s) | 77, 185, 1017 |
| HphI | GGTGA | 4 cut(s) | 41, 443, 1081, 1150 |
| Hpy166II | GTNNAC | 4 cut(s) | 359, 370, 592, 615 |
| Hpy188I | TCNGA | 6 cut(s) | 478, 782, 890, 1045, 1051, 1255 |
| Hpy188III | TCNNGA | 2 cut(s) | 131, 718 |
| Hpy8I | GTNNAC | 4 cut(s) | 359, 370, 592, 615 |
| HpyAV | CCTTC | 6 cut(s) | 580, 797, 866, 953, 1083, 1450 |
| HpyCH4III | ACNGT | 3 cut(s) | 38, 532, 703 |
| HpyCH4IV | ACGT | 3 cut(s) | 286, 862, 1212 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 188, 935 |
| HpyF3I | CTNAG | 7 cut(s) | 42, 102, 383, 741, 1176, 1254, 1476 |
| HpySE526I | ACGT | 3 cut(s) | 286, 862, 1212 |
| Kzo9I | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| LmnI | GCTCC | 3 cut(s) | 79, 715, 1456 |
| Lsp1109I | GCAGC | 3 cut(s) | 388, 391, 1156 |
| LweI | GCATC | 2 cut(s) | 711, 1357 |
| MabI | ACCWGGT | 1 cut(s) | 1237 |
| MaeI | CTAG | 3 cut(s) | 467, 1065, 1364 |
| MaeII | ACGT | 3 cut(s) | 286, 862, 1212 |
| MaeIII | GTNAC | 3 cut(s) | 431, 646, 1138 |
| MalI | GATC | 7 cut(s) | 239, 522, 636, 687, 765, 1161, 1389 |
| MboI | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| MboII | GAAGA | 8 cut(s) | 119, 311, 340, 524, 758, 1045, 1307, 1310 |
| MfeI | CAATTG | 2 cut(s) | 1398, 1460 |
| MflI | RGATCY | 2 cut(s) | 520, 763 |
| MmeI | TCCRAC | 3 cut(s) | 522, 1162, 1183 |
| Mph1103I | ATGCAT | 2 cut(s) | 684, 726 |
| MseI | TTAA | 5 cut(s) | 291, 342, 798, 972, 1010 |
| MspA1I | CMGCKG | 1 cut(s) | 382 |
| MspCI | CTTAAG | 2 cut(s) | 290, 341 |
| MspI | CCGG | 3 cut(s) | 77, 185, 1017 |
| MspR9I | CCNGG | 4 cut(s) | 185, 1232, 1239, 1281 |
| MunI | CAATTG | 2 cut(s) | 1398, 1460 |
| Mva1269I | GAATGC | 1 cut(s) | 565 |
| MvaI | CCWGG | 3 cut(s) | 1232, 1239, 1281 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 188, 935 |
| NciI | CCSGG | 1 cut(s) | 185 |
| NcoI | CCATGG | 1 cut(s) | 454 |
| NdeI | CATATG | 4 cut(s) | 259, 415, 643, 1426 |
| NdeII | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| NlaIV | GGNNCC | 6 cut(s) | 166, 316, 981, 1114, 1236, 1433 |
| NmuCI | GTSAC | 2 cut(s) | 646, 1138 |
| NsiI | ATGCAT | 2 cut(s) | 684, 726 |
| NspI | RCATGY | 2 cut(s) | 376, 1169 |
| PaeI | GCATGC | 1 cut(s) | 1169 |
| PagI | TCATGA | 1 cut(s) | 717 |
| PctI | GAATGC | 1 cut(s) | 565 |
| PfeI | GAWTC | 3 cut(s) | 223, 1002, 1046 |
| PinAI | ACCGGT | 1 cut(s) | 1016 |
| PkrI | GCNGC | 3 cut(s) | 378, 381, 1171 |
| PpuMI | RGGWCCY | 2 cut(s) | 106, 1235 |
| Psp5II | RGGWCCY | 2 cut(s) | 106, 1235 |
| Psp6I | CCWGG | 3 cut(s) | 1230, 1237, 1279 |
| PspGI | CCWGG | 3 cut(s) | 1230, 1237, 1279 |
| PspN4I | GGNNCC | 6 cut(s) | 166, 316, 981, 1114, 1236, 1433 |
| PspPI | GGNCC | 4 cut(s) | 106, 164, 979, 1235 |
| PspPPI | RGGWCCY | 2 cut(s) | 106, 1235 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1234, 1266 |
| PstNI | CAGNNNCTG | 1 cut(s) | 382 |
| PsuI | RGATCY | 2 cut(s) | 520, 763 |
| PvuII | CAGCTG | 1 cut(s) | 382 |
| RsaI | GTAC | 6 cut(s) | 32, 305, 705, 950, 1326, 1362 |
| RsaNI | GTAC | 6 cut(s) | 31, 304, 704, 949, 1325, 1361 |
| SaqAI | TTAA | 5 cut(s) | 291, 342, 798, 972, 1010 |
| SatI | GCNGC | 3 cut(s) | 377, 380, 1170 |
| Sau3AI | GATC | 7 cut(s) | 237, 520, 634, 685, 763, 1159, 1387 |
| Sau96I | GGNCC | 4 cut(s) | 106, 164, 979, 1235 |
| ScaI | AGTACT | 1 cut(s) | 305 |
| ScrFI | CCNGG | 4 cut(s) | 185, 1232, 1239, 1281 |
| SexAI | ACCWGGT | 1 cut(s) | 1237 |
| SfaNI | GCATC | 2 cut(s) | 711, 1357 |
| SinI | GGWCC | 2 cut(s) | 106, 1235 |
| SmlI | CTYRAG | 2 cut(s) | 290, 341 |
| SmoI | CTYRAG | 2 cut(s) | 290, 341 |
| SphI | GCATGC | 1 cut(s) | 1169 |
| SsiI | CCGC | 2 cut(s) | 235, 268 |
| SspI | AATATT | 1 cut(s) | 402 |
| SspMI | CTAG | 3 cut(s) | 467, 1065, 1364 |
| StyD4I | CCNGG | 4 cut(s) | 183, 1230, 1237, 1279 |
| StyI | CCWWGG | 3 cut(s) | 454, 1064, 1216 |
| TaaI | ACNGT | 3 cut(s) | 38, 532, 703 |
| TaiI | ACGT | 3 cut(s) | 289, 865, 1215 |
| TatI | WGTACW | 4 cut(s) | 303, 948, 1324, 1360 |
| TfiI | GAWTC | 3 cut(s) | 223, 1002, 1046 |
| Tru1I | TTAA | 5 cut(s) | 291, 342, 798, 972, 1010 |
| Tru9I | TTAA | 5 cut(s) | 291, 342, 798, 972, 1010 |
| TscAI | CASTG | 6 cut(s) | 206, 580, 607, 1090, 1125, 1390 |
| TseFI | GTSAC | 2 cut(s) | 646, 1138 |
| TseI | GCWGC | 3 cut(s) | 376, 379, 1169 |
| Tsp45I | GTSAC | 2 cut(s) | 646, 1138 |
| TspDTI | ATGAA | 8 cut(s) | 215, 341, 402, 667, 748, 843, 904, 1346 |
| TspRI | CASTG | 6 cut(s) | 206, 580, 607, 1090, 1125, 1390 |
| Vha464I | CTTAAG | 2 cut(s) | 290, 341 |
| VpaK11BI | GGWCC | 2 cut(s) | 106, 1235 |
| XapI | RAATTY | 1 cut(s) | 320 |
| XceI | RCATGY | 2 cut(s) | 376, 1169 |
| XmaJI | CCTAGG | 1 cut(s) | 1064 |
| XspI | CTAG | 3 cut(s) | 467, 1065, 1364 |
| ZrmI | AGTACT | 1 cut(s) | 305 |
| Zsp2I | ATGCAT | 2 cut(s) | 684, 726 |