RLG00000030681

Carotenoid 9,10(9',10')-cleavage dioxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0008044
Physical Location & Seq
Forward (+)
65877297 .. 65883594
6298 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030681

Sequence Viewer

Length: 1896 bp
ATGTTGGGTGGCAGCAAGGGCATATTGGAGACTACACATAATATCAGCATATATAAAAACAACTATAAAATAAAAAGTGGAGTGGAGTTGGTAATAAGAGAAGTGCGAATATCACTTCCCAAGATAAAGCCACCCACCACACGACACTACTTGGTTCACACAAACAAGACCAAAAACAAGAACAAGAACCAGAGCCAGAGGAGTGTCATCTGCTTGGCTACAGAAACCGCAGTTGTGATGGCGGAGGTGGTCGAGAAGCCCCACGATGATGAAGTGAAGGAGAAGCTGAAGAGCAACGGCATAGTGGTGCCGAATCCGAAGCCGAGCAAAGGCGTCACCTCCAAACTGGTGGACATGGTTGAGAAGCTCATTGTCAAGTTGATGTACGACAGTTCTCAGCCTCACCACTATCTCGCTGGAAACTTTGCTCCGGTTATTGAGGAAACGCCTCCCACTAAGGACCTCAATGTCATCGGGCATCTTCCTGATTGCTTGAATGGAGAGTTTGTAAGGGTTGGCCCCAACCCCAAGTTTGCTCCAGTTGCTGGATATCACTGGTTTGATGGAGATGGTATGATTCATGGTATGCGCATCAAGGATGGGAAAGCAACATATGTTTCCCGCTATGTAAAGACATCGCGTCTTAAGCAAGAAGAGTACTTTGGAGGTGCCAAATTTATGAAGGTCGGAGACCTTAAGGGGCTTTTTGGTTTACTCATGGTTTACATGCAGCAGCTGAGAGCAAAACTGAAAGTATTAGATCTTTCATATGGACATGGGACAGGTAACACAGCTCTCGTATATCACCATGGGAAACTTCTAGCTCTTTCAGAGGCAGACAAACCTTATGTTCTCAAAGTTCTGGAAGATGGAGATCTGCAAACAGTTGGCTTGTTGGATTATGACAAGAGATTGAAGCATTCCTTCACTGCTCATCCAAAGGTTGACCCTTTCACTGGGGAGATGTTTACATTTGGATATTCGCATGATCCACCATATGTCACATACAGAGTAATTTCAAAGGATGGTTTCATGCATGATCCTATACCTATAACAGTACCAGCTCCTGTCATGATGCATGATTTTGCCATTACTGAGAACTATGCAATTTTCATGGATCTTCCCTTGTATTTCAGACCAAAGGAAATGGTTAAGGAAGGCAAGCTGATATTCTCATTTGATGAAACAAAAAAAGCTCGCTTTGGTGTCCTTCCACGATATGCAAAGGATGATTTGCTAATCAGATGGTTTGAGCTTCCAAATTGCTTCATTTTCCATAATGCTAATGCTTGGGAGGAAGAGGACGAAGTTGTTTTAATGACATGCCGCCTTGAGAATCCAGATTTAGACATGGTCAATGGACCAATCAAGAAAAAGCTTGACAACTTCAAAAATGAGCTGTATGAGATGAGATTCAACTTAAAAACCGGTTTAGCAACACAGAAGAAATTATCAGAATCAGCTGTAGATTTTCCTAGGGTGAATGAGAGCTACACTGGAAGGAAGCAACGCTATGTCTATGGAACCACACTGGATAGCATTGCGAAGGTGACAGGGATAGTCAAGTTTGATCTGCATGCTGCACCTGAGATTGGAAAAACGAAAATTGAGGTTGGAGGAAACGTCCAAGGCCTTTATGACCTGGGACCGGGTAGATTTGGTTCTGAGGCTATTTTTGTCCCCCGTGTTCCTGGTATTACTTCAGAAGAAGATGATGGCTACTTGATATTCTTTGTACATGATGAGAATACTGGAAAATCAGCAATTCATGTATTAGATGCAAAAACAATGTCCAGTGATCCTGTTGCAATTGTTGAGTTGCCCCACAGAGTTCCATATGGGTTCCATGCCTTCTTTGTGACAGAGGAGCAATTGCAAGAACAAGCAAAGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RPE65

Protein Analysis

632

Amino Acids

71.26

Weight (kDa)

8.03

Isoelectric Point (pI)

31.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 142 - 620 1.1e-143 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 467
Acc16I TGCGCA 1 cut(s) 590
AccB1I GGYRCC 2 cut(s) 307, 668
AccB7I CCANNNNNTGG 1 cut(s) 545
AccII CGCG 1 cut(s) 640
AciI CCGC 4 cut(s) 228, 242, 622, 1327
AclWI GGATC 4 cut(s) 983, 1034, 1125, 1793
AcsI RAATTY 1 cut(s) 674
AcuI CTGAAG 2 cut(s) 308, 1686
AcyI GRCGYC 1 cut(s) 333
AfaI GTAC 4 cut(s) 386, 659, 1059, 1737
AfiI CCNNNNNNNGG 5 cut(s) 329, 545, 956, 1592, 1648
AflII CTTAAG 2 cut(s) 644, 695
AgeI ACCGGT 1 cut(s) 1427
AgsI TTSAA 5 cut(s) 496, 916, 1020, 1390, 1417
AhdI GACNNNNNGTC 1 cut(s) 639
AjnI CCWGG 2 cut(s) 1641, 1690
AjuI GAANNNNNNNTTGG 2 cut(s) 645, 677
Alw26I GTCTC 2 cut(s) 23, 684
AlwI GGATC 4 cut(s) 983, 1034, 1125, 1793
AlwNI CAGNNNCTG 3 cut(s) 545, 736, 1067
AoxI GGCC 2 cut(s) 517, 1630
ApeKI GCWGC 4 cut(s) 12, 730, 733, 1580
ApoI RAATTY 1 cut(s) 674
ArsI GACNNNNNNTTYG 2 cut(s) 1775, 1807
AsiGI ACCGGT 1 cut(s) 1427
AspA2I CCTAGG 1 cut(s) 1475
AspLEI GCGC 1 cut(s) 591
AspS9I GGNCC 4 cut(s) 460, 518, 1361, 1646
AsuC2I CCSGG 1 cut(s) 1650
AsuHPI GGTGA 5 cut(s) 328, 395, 797, 1492, 1561
AvaII GGWCC 3 cut(s) 460, 1361, 1646
AvrII CCTAGG 1 cut(s) 1475
BanI GGYRCC 2 cut(s) 307, 668
BbvI GCAGC 4 cut(s) 24, 742, 745, 1567
BccI CCATC 8 cut(s) 232, 557, 563, 593, 863, 1019, 1239, 1709
BceAI ACGGC 1 cut(s) 313
BciT130I CCWGG 2 cut(s) 1643, 1692
BcnI CCSGG 1 cut(s) 1650
BcoDI GTCTC 2 cut(s) 23, 684
BfaI CTAG 2 cut(s) 821, 1476
BfmI CTRYAG 2 cut(s) 219, 1464
BfrI CTTAAG 2 cut(s) 644, 695
BglII AGATCT 2 cut(s) 760, 874
BisI GCNGC 5 cut(s) 13, 731, 734, 1327, 1581
BlnI CCTAGG 1 cut(s) 1475
BlsI GCNGC 5 cut(s) 14, 732, 735, 1328, 1582
BmcAI AGTACT 1 cut(s) 659
Bme1390I CCNGG 3 cut(s) 1643, 1650, 1692
Bme18I GGWCC 3 cut(s) 460, 1361, 1646
BmeRI GACNNNNNGTC 1 cut(s) 639
BmgT120I GGNCC 4 cut(s) 460, 518, 1361, 1646
BmiI GGNNCC 6 cut(s) 309, 520, 670, 1525, 1647, 1844
BmrFI CCNGG 3 cut(s) 1643, 1650, 1692
BmrI ACTGGG 1 cut(s) 966
BmsI GCATC 4 cut(s) 487, 600, 1065, 1768
BmuI ACTGGG 1 cut(s) 966
BpmI CTGGAG 1 cut(s) 522
BpuEI CTTGAG 1 cut(s) 1352
BpuMI CCSGG 1 cut(s) 1650
BsaBI GATNNNNATC 1 cut(s) 873
BsaHI GRCGYC 1 cut(s) 333
BsaI GGTCTC 1 cut(s) 684
BsaJI CCNNGG 4 cut(s) 808, 1475, 1627, 1642
BsaWI WCCGGW 2 cut(s) 430, 1427
BsaXI ACNNNNNCTCC 4 cut(s) 492, 522, 1608, 1638
Bsc4I CCNNNNNNNGG 5 cut(s) 329, 545, 956, 1592, 1648
Bse118I RCCGGY 1 cut(s) 1427
Bse1I ACTGG 8 cut(s) 351, 539, 560, 961, 1501, 1536, 1756, 1794
Bse3DI GCAATG 1 cut(s) 1539
Bse8I GATNNNNATC 1 cut(s) 873
BseBI CCWGG 2 cut(s) 1643, 1692
BseDI CCNNGG 4 cut(s) 808, 1475, 1627, 1642
BseGI GGATG 4 cut(s) 604, 934, 1030, 1234
BseJI GATNNNNATC 1 cut(s) 873
BseLI CCNNNNNNNGG 5 cut(s) 329, 545, 956, 1592, 1648
BseMI GCAATG 1 cut(s) 1539
BseMII CTCAG 5 cut(s) 410, 728, 1086, 1578, 1656
BseNI ACTGG 8 cut(s) 351, 539, 560, 961, 1501, 1536, 1756, 1794
BseRI GAGGAG 2 cut(s) 214, 1880
BseXI GCAGC 4 cut(s) 24, 742, 745, 1567
BsgI GTGCAG 1 cut(s) 1566
Bsh1236I CGCG 1 cut(s) 640
BshFI GGCC 2 cut(s) 519, 1632
BshNI GGYRCC 2 cut(s) 307, 668
BshTI ACCGGT 1 cut(s) 1427
BsiSI CCGG 3 cut(s) 431, 1428, 1649
BslFI GGGAC 3 cut(s) 793, 1659, 1664
BslI CCNNNNNNNGG 5 cut(s) 329, 545, 956, 1592, 1648
BsmAI GTCTC 2 cut(s) 23, 684
BsmFI GGGAC 3 cut(s) 793, 1659, 1664
BsmI GAATGC 1 cut(s) 919
BsnI GGCC 2 cut(s) 519, 1632
Bso31I GGTCTC 1 cut(s) 684
Bsp1407I TGTACA 1 cut(s) 1735
Bsp143I GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
Bsp19I CCATGG 1 cut(s) 808
BspACI CCGC 4 cut(s) 228, 242, 622, 1327
BspANI GGCC 2 cut(s) 519, 1632
BspCNI CTCAG 5 cut(s) 409, 729, 1087, 1579, 1657
BspFNI CGCG 1 cut(s) 640
BspHI TCATGA 1 cut(s) 1071
BspLI GGNNCC 6 cut(s) 309, 520, 670, 1525, 1647, 1844
BspPI GGATC 4 cut(s) 983, 1034, 1125, 1793
BspQI GCTCTTC 1 cut(s) 284
BspT107I GGYRCC 2 cut(s) 307, 668
BspTI CTTAAG 2 cut(s) 644, 695
BspTNI GGTCTC 1 cut(s) 684
BsrDI GCAATG 1 cut(s) 1539
BsrFI RCCGGY 1 cut(s) 1427
BsrGI TGTACA 1 cut(s) 1735
BsrI ACTGG 8 cut(s) 351, 539, 560, 961, 1501, 1536, 1756, 1794
BssAI RCCGGY 1 cut(s) 1427
BssECI CCNNGG 4 cut(s) 808, 1475, 1627, 1642
BssMI GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
BssNI GRCGYC 1 cut(s) 333
BssT1I CCWWGG 3 cut(s) 808, 1475, 1627
Bst2UI CCWGG 2 cut(s) 1643, 1692
Bst4CI ACNGT 3 cut(s) 392, 886, 1057
Bst6I CTCTTC 3 cut(s) 284, 648, 1293
BstACI GRCGYC 1 cut(s) 333
BstAFI CTTAAG 2 cut(s) 644, 695
BstAUI TGTACA 1 cut(s) 1735
BstC8I GCNNGC 3 cut(s) 1163, 1198, 1578
BstDEI CTNAG 6 cut(s) 396, 456, 737, 1095, 1587, 1665
BstDSI CCRYGG 1 cut(s) 808
BstF5I GGATG 4 cut(s) 604, 934, 1030, 1234
BstFNI CGCG 1 cut(s) 640
BstHHI GCGC 1 cut(s) 591
BstKTI GATC 7 cut(s) 763, 877, 991, 1042, 1120, 1573, 1801
BstMAI GTCTC 2 cut(s) 23, 684
BstMBI GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
BstMWI GCNNNNNNNGC 3 cut(s) 18, 542, 646
BstNI CCWGG 2 cut(s) 1643, 1692
BstNSI RCATGY 3 cut(s) 730, 1326, 1580
BstSCI CCNGG 3 cut(s) 1641, 1648, 1690
BstSFI CTRYAG 2 cut(s) 219, 1464
BstUI CGCG 1 cut(s) 640
BstV1I GCAGC 4 cut(s) 24, 742, 745, 1567
BstX2I RGATCY 3 cut(s) 760, 874, 1117
BstXI CCANNNNNNTGG 1 cut(s) 349
BstYI RGATCY 3 cut(s) 760, 874, 1117
BsuRI GGCC 2 cut(s) 519, 1632
BtgI CCRYGG 1 cut(s) 808
BtgZI GCGATG 1 cut(s) 621
BtsCI GGATG 4 cut(s) 604, 934, 1030, 1234
BtsI GCAGTG 1 cut(s) 927
BtsIMutI CAGTG 6 cut(s) 553, 927, 954, 1494, 1529, 1801
Cac8I GCNNGC 3 cut(s) 1163, 1198, 1578
CaiI CAGNNNCTG 3 cut(s) 545, 736, 1067
CciI TCATGA 1 cut(s) 1071
CfoI GCGC 1 cut(s) 591
Cfr10I RCCGGY 1 cut(s) 1427
Cfr13I GGNCC 4 cut(s) 460, 518, 1361, 1646
CseI GACGC 2 cut(s) 322, 629
Csp6I GTAC 4 cut(s) 385, 658, 1058, 1736
CspAI ACCGGT 1 cut(s) 1427
CviQI GTAC 4 cut(s) 385, 658, 1058, 1736
DdeI CTNAG 6 cut(s) 396, 456, 737, 1095, 1587, 1665
DpnI GATC 7 cut(s) 762, 876, 990, 1041, 1119, 1572, 1800
DpnII GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
DrdI GACNNNNNNGTC 1 cut(s) 467
DriI GACNNNNNGTC 1 cut(s) 639
DseDI GACNNNNNNGTC 1 cut(s) 467
Eam1104I CTCTTC 3 cut(s) 284, 648, 1293
Eam1105I GACNNNNNGTC 1 cut(s) 639
EarI CTCTTC 3 cut(s) 284, 648, 1293
EciI GGCGGA 1 cut(s) 257
Eco130I CCWWGG 3 cut(s) 808, 1475, 1627
Eco147I AGGCCT 1 cut(s) 1632
Eco31I GGTCTC 1 cut(s) 684
Eco32I GATATC 1 cut(s) 551
Eco47I GGWCC 3 cut(s) 460, 1361, 1646
Eco57I CTGAAG 2 cut(s) 308, 1686
EcoO109I RGGNCCY 1 cut(s) 460
EcoRII CCWGG 2 cut(s) 1641, 1690
EcoRV GATATC 1 cut(s) 551
EcoT14I CCWWGG 3 cut(s) 808, 1475, 1627
EcoT22I ATGCAT 2 cut(s) 1038, 1080
ErhI CCWWGG 3 cut(s) 808, 1475, 1627
FalI AAGNNNNNCTT 2 cut(s) 908, 940
FaqI GGGAC 3 cut(s) 793, 1659, 1664
FauI CCCGC 1 cut(s) 629
FauNDI CATATG 4 cut(s) 613, 769, 997, 1837
Fnu4HI GCNGC 5 cut(s) 13, 731, 734, 1327, 1581
FokI GGATG 4 cut(s) 611, 921, 1037, 1241
Fsp4HI GCNGC 5 cut(s) 13, 731, 734, 1327, 1581
FspAI RTGCGCAY 1 cut(s) 590
FspBI CTAG 2 cut(s) 821, 1476
FspI TGCGCA 1 cut(s) 590
GlaI GCGC 1 cut(s) 590
GluI GCNGC 5 cut(s) 13, 731, 734, 1327, 1581
GsuI CTGGAG 1 cut(s) 522
HaeIII GGCC 2 cut(s) 519, 1632
HapII CCGG 3 cut(s) 431, 1428, 1649
HgaI GACGC 2 cut(s) 322, 629
HhaI GCGC 1 cut(s) 591
Hin1I GRCGYC 1 cut(s) 333
Hin6I GCGC 1 cut(s) 589
HinP1I GCGC 1 cut(s) 589
HincII GTYRAC 1 cut(s) 946
HindII GTYRAC 1 cut(s) 946
HindIII AAGCTT 1 cut(s) 1376
HinfI GANTC 5 cut(s) 313, 577, 1336, 1413, 1457
HpaII CCGG 3 cut(s) 431, 1428, 1649
HphI GGTGA 5 cut(s) 328, 395, 797, 1492, 1561
Hpy166II GTNNAC 6 cut(s) 157, 352, 713, 724, 946, 969
Hpy188I TCNGA 8 cut(s) 318, 689, 832, 1136, 1244, 1456, 1666, 1705
Hpy188III TCNNGA 6 cut(s) 253, 485, 863, 1072, 1340, 1369
Hpy8I GTNNAC 6 cut(s) 157, 352, 713, 724, 946, 969
HpyAV CCTTC 8 cut(s) 271, 676, 934, 1151, 1220, 1494, 1540, 1861
HpyCH4III ACNGT 3 cut(s) 392, 886, 1057
HpyCH4IV ACGT 1 cut(s) 1623
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 542, 646
HpyF3I CTNAG 6 cut(s) 396, 456, 737, 1095, 1587, 1665
HpySE526I ACGT 1 cut(s) 1623
Hsp92I GRCGYC 1 cut(s) 333
HspAI GCGC 1 cut(s) 589
Kzo9I GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
LguI GCTCTTC 1 cut(s) 284
LmnI GCTCC 4 cut(s) 433, 541, 1069, 1867
Lsp1109I GCAGC 4 cut(s) 24, 742, 745, 1567
LweI GCATC 4 cut(s) 487, 600, 1065, 1768
MaeI CTAG 2 cut(s) 821, 1476
MaeII ACGT 1 cut(s) 1623
MaeIII GTNAC 5 cut(s) 334, 785, 1000, 1549, 1858
MalI GATC 7 cut(s) 762, 876, 990, 1041, 1119, 1572, 1800
MboI GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
MboII GAAGA 9 cut(s) 301, 473, 665, 878, 1112, 1310, 1456, 1718, 1721
MfeI CAATTG 2 cut(s) 1809, 1871
MflI RGATCY 3 cut(s) 760, 874, 1117
MluCI AATT 9 cut(s) 674, 1014, 1107, 1261, 1448, 1605, 1764, 1809, 1871
MmeI TCCRAC 3 cut(s) 667, 876, 1594
Mph1103I ATGCAT 2 cut(s) 1038, 1080
MseI TTAA 5 cut(s) 645, 696, 1152, 1316, 1421
MslI CAYNNNNRTG 2 cut(s) 267, 305
MspA1I CMGCKG 2 cut(s) 736, 1463
MspCI CTTAAG 2 cut(s) 644, 695
MspI CCGG 3 cut(s) 431, 1428, 1649
MspR9I CCNGG 3 cut(s) 1643, 1650, 1692
MunI CAATTG 2 cut(s) 1809, 1871
Mva1269I GAATGC 1 cut(s) 919
MvaI CCWGG 2 cut(s) 1643, 1692
MvnI CGCG 1 cut(s) 640
MwoI GCNNNNNNNGC 3 cut(s) 18, 542, 646
NciI CCSGG 1 cut(s) 1650
NcoI CCATGG 1 cut(s) 808
NdeI CATATG 4 cut(s) 613, 769, 997, 1837
NdeII GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
NlaIV GGNNCC 6 cut(s) 309, 520, 670, 1525, 1647, 1844
NmeAIII GCCGAG 1 cut(s) 348
NmuCI GTSAC 4 cut(s) 334, 1000, 1549, 1858
NsbI TGCGCA 1 cut(s) 590
NsiI ATGCAT 2 cut(s) 1038, 1080
NspI RCATGY 3 cut(s) 730, 1326, 1580
PaeI GCATGC 1 cut(s) 1580
PagI TCATGA 1 cut(s) 1071
PceI AGGCCT 1 cut(s) 1632
PciSI GCTCTTC 1 cut(s) 284
PctI GAATGC 1 cut(s) 919
PfeI GAWTC 5 cut(s) 313, 577, 1336, 1413, 1457
PflFI GACNNNGTC 1 cut(s) 1352
PflMI CCANNNNNTGG 1 cut(s) 545
PinAI ACCGGT 1 cut(s) 1427
PkrI GCNGC 5 cut(s) 14, 732, 735, 1328, 1582
PpuMI RGGWCCY 1 cut(s) 460
Psp5II RGGWCCY 1 cut(s) 460
Psp6I CCWGG 2 cut(s) 1641, 1690
PspGI CCWGG 2 cut(s) 1641, 1690
PspN4I GGNNCC 6 cut(s) 309, 520, 670, 1525, 1647, 1844
PspPI GGNCC 4 cut(s) 460, 518, 1361, 1646
PspPPI RGGWCCY 1 cut(s) 460
PsrI GAACNNNNNNTAC 2 cut(s) 1645, 1677
PstNI CAGNNNCTG 3 cut(s) 545, 736, 1067
PsuI RGATCY 3 cut(s) 760, 874, 1117
PsyI GACNNNGTC 1 cut(s) 1352
PvuII CAGCTG 2 cut(s) 736, 1463
RsaI GTAC 4 cut(s) 386, 659, 1059, 1737
RsaNI GTAC 4 cut(s) 385, 658, 1058, 1736
RseI CAYNNNNRTG 2 cut(s) 267, 305
SapI GCTCTTC 1 cut(s) 284
SaqAI TTAA 5 cut(s) 645, 696, 1152, 1316, 1421
SatI GCNGC 5 cut(s) 13, 731, 734, 1327, 1581
Sau3AI GATC 7 cut(s) 760, 874, 988, 1039, 1117, 1570, 1798
Sau96I GGNCC 4 cut(s) 460, 518, 1361, 1646
ScaI AGTACT 1 cut(s) 659
ScrFI CCNGG 3 cut(s) 1643, 1650, 1692
SfaNI GCATC 4 cut(s) 487, 600, 1065, 1768
SfcI CTRYAG 2 cut(s) 219, 1464
SinI GGWCC 3 cut(s) 460, 1361, 1646
SmiMI CAYNNNNRTG 2 cut(s) 267, 305
SmlI CTYRAG 3 cut(s) 644, 695, 1331
SmoI CTYRAG 3 cut(s) 644, 695, 1331
SphI GCATGC 1 cut(s) 1580
Sse9I AATT 9 cut(s) 674, 1014, 1107, 1261, 1448, 1605, 1764, 1809, 1871
SseBI AGGCCT 1 cut(s) 1632
SsiI CCGC 4 cut(s) 228, 242, 622, 1327
SspMI CTAG 2 cut(s) 821, 1476
StuI AGGCCT 1 cut(s) 1632
StyD4I CCNGG 3 cut(s) 1641, 1648, 1690
StyI CCWWGG 3 cut(s) 808, 1475, 1627
TaaI ACNGT 3 cut(s) 392, 886, 1057
TaiI ACGT 1 cut(s) 1626
TaqI TCGA 1 cut(s) 252
TasI AATT 9 cut(s) 674, 1014, 1107, 1261, 1448, 1605, 1764, 1809, 1871
TatI WGTACW 2 cut(s) 657, 1735
TauI GCSGC 1 cut(s) 1329
TfiI GAWTC 5 cut(s) 313, 577, 1336, 1413, 1457
Tru1I TTAA 5 cut(s) 645, 696, 1152, 1316, 1421
Tru9I TTAA 5 cut(s) 645, 696, 1152, 1316, 1421
TscAI CASTG 6 cut(s) 560, 934, 961, 1501, 1536, 1801
TseFI GTSAC 4 cut(s) 334, 1000, 1549, 1858
TseI GCWGC 4 cut(s) 12, 730, 733, 1580
Tsp45I GTSAC 4 cut(s) 334, 1000, 1549, 1858
TspDTI ATGAA 9 cut(s) 285, 569, 695, 756, 1021, 1102, 1197, 1258, 1757
TspRI CASTG 6 cut(s) 560, 934, 961, 1501, 1536, 1801
Tth111I GACNNNGTC 1 cut(s) 1352
Van91I CCANNNNNTGG 1 cut(s) 545
Vha464I CTTAAG 2 cut(s) 644, 695
VpaK11BI GGWCC 3 cut(s) 460, 1361, 1646
XapI RAATTY 1 cut(s) 674
XceI RCATGY 3 cut(s) 730, 1326, 1580
XcmI CCANNNNNNNNNTGG 1 cut(s) 413
XmaJI CCTAGG 1 cut(s) 1475
XspI CTAG 2 cut(s) 821, 1476
ZrmI AGTACT 1 cut(s) 659
Zsp2I ATGCAT 2 cut(s) 1038, 1080
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.