Rw1G001300

Carotenoid 9,10(9',10')-cleavage dioxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0008044
Physical Location & Seq
Reverse (-)
1982746 .. 1989557
6812 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G001300.1

Sequence Viewer

Length: 1884 bp
ATGTTGGGTGGCAGCAAGGGTGTATTGGAGACTTCACATAATAACAACATATATAAAAACAACTATAAAATAAAGAGTGGAGTGGAGTTGGTAATAAGAGAAGTGCGAATATCACTTCCCAAGATAAAGCCACCCACCACACGACACTACTTGGTTCACACAAACAAGAACAAGAACCAGAGCCAGAGGAGTGTCATCTGCTTGGCTACAGAAACCGCAGTTGTGATGGCGGAGGTGGTCGAGAAGCGTCACGATGATGATGTGAAGGAGAAGCTGAAGAGCAACGGCATAGTGGTGCCGAATCCGAAGCCGAGCAAGGGCGTCACCTCCACACTGGTGGACACGGTTGAGAAGCTCATTGTCAAGTTGATGTACGACAGTTCTCAGCCTCACCACTATCTCGCCGGAAACTTTGCTCCGGTTATTGAGGAAACGCCTCCCACCAAGGACCTCCATGTCATCGGGCATCTTCCTGATTGCTTGAATGGAGAGTTTGTAAGGGTTGGCCCCAACCCCAAGTTTGCTCCAGTTGCTGGATATCACTGGTTTGATGGAGATGGTATGATTCATGGTATGCGCATCAAGGATGGGAAAGCAACATATGTTTCCCGCTATGTAAAGACATCACGTTTTAAGCAAGAAGAGTACTTTGGAGGTGCCAAATTTATGAAGATCGGAGACCTTAAGGGGCTTTTTGGTTTACTCATGGTTTACATGCAGCAGCTGAGAGCTAAACTGAAAGTATTAGATCTTTCATATGGACATGGGACAGGTAACACAGCTCTCGTATATCACCATGGGAAACTTCTAGCTCTTTCAGAGGGAGACAAACCTTATGTTCTCAAAGTTCTGGAAGATGGAGATCTGCAAACAGTTGGCTTGTTGGATTATGACAAGAGATTGAAGCATTCCTTCACTGCTCATCCAAAGGTTGACCCTTTCACTGGGGAGATGTTTACATTTGGCTATTCGCATGATCCACCATATGTCACATACAGAGTAATTTCAAAGGATGGTTTCATGCATGATCCTATACCTATAACAGTACCAGCTCCTGTCATGATGCATGATTTTGCCATTACTGAGAACTATGCAATTTTCATGGATCTTCCCTTGTATTTCAGACCAAAGGAAATGGTTAAGGAAGGCAAGCTGATATTCTCATTTGATGAAACAAAAAAAGCTCGCTTTGGTGTCCTTCCACGATATGCAAAGGATGATTTGCTAATCAGATGGTTTGAGCTTCCAAATTGCTTCATTTTCCATAATGCTAATGCTTGGGAGGAAGAGGACGAAGTTGTTTTAATGACATGCCGCCTTGAGAATCCAGATTTAGACATGGTCAATGGACCGATCAAGAAAAAGCTTGACAACTTCAAAAATGAGCTGTATGAGATGAGATTCAACTTAAAAACCGGTTTAGCAACACAGAAGAAATTATCAGAATCAGCTGTAGATTTTCCTAGGGTGAATGAGAGCTACACTGGAAGGAAGCAACGCTATGTCTATGGAACCACACTGGATAGCATTGCGAAGGTGACAGGGATAGTCAAGTTTGATCTGCATGCTGCACCTGAGATTGGAAAAATGAAAATTGAGGTTGGAGGAAACGTCCAAGGCCTTTATGACCTGGGACCTGGTAGATTTGGTTCTGAGGCTATTTTTGTCCCCCGTGTTCCTGGTATTACTTCAGAAGAAGATGATGGCTACTTGATATTCTTTGTACATGATGAGAATACTGGAAAATCAGCAATTCATGTATTAGATGCAAAAACAATGTCCAGTGATCCTGTTGCAATTGTTGAGTTGCCCCACAGGGTTCCATATGGGTTCCATGCCTTCTTTGTGACAGAGGAGCAATTGCAAGAACAAGCAAAGTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RPE65

Protein Analysis

627

Amino Acids

70.86

Weight (kDa)

7.38

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 138 - 616 7.4e-144 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 455
Acc16I TGCGCA 1 cut(s) 578
AccB1I GGYRCC 2 cut(s) 295, 656
AccB7I CCANNNNNTGG 1 cut(s) 533
AciI CCGC 4 cut(s) 216, 230, 610, 1315
AclWI GGATC 4 cut(s) 971, 1022, 1113, 1781
AcsI RAATTY 1 cut(s) 662
AcuI CTGAAG 2 cut(s) 296, 1674
AcyI GRCGYC 1 cut(s) 321
AfaI GTAC 4 cut(s) 374, 647, 1047, 1725
AfiI CCNNNNNNNGG 4 cut(s) 317, 533, 944, 1580
AflII CTTAAG 1 cut(s) 683
AgeI ACCGGT 1 cut(s) 1415
AgsI TTSAA 5 cut(s) 484, 904, 1008, 1378, 1405
AjnI CCWGG 3 cut(s) 1629, 1636, 1678
AjuI GAANNNNNNNTTGG 2 cut(s) 633, 665
AleI CACNNNNGTG 1 cut(s) 335
Alw26I GTCTC 3 cut(s) 23, 672, 819
AlwI GGATC 4 cut(s) 971, 1022, 1113, 1781
AlwNI CAGNNNCTG 3 cut(s) 533, 724, 1055
AoxI GGCC 2 cut(s) 505, 1618
ApeKI GCWGC 4 cut(s) 12, 718, 721, 1568
ApoI RAATTY 1 cut(s) 662
ArsI GACNNNNNNTTYG 2 cut(s) 1763, 1795
AsiGI ACCGGT 1 cut(s) 1415
AspA2I CCTAGG 1 cut(s) 1463
AspLEI GCGC 1 cut(s) 579
AspS9I GGNCC 4 cut(s) 448, 506, 1349, 1634
AsuHPI GGTGA 5 cut(s) 316, 383, 785, 1480, 1549
AvaII GGWCC 3 cut(s) 448, 1349, 1634
AvrII CCTAGG 1 cut(s) 1463
BanI GGYRCC 2 cut(s) 295, 656
BbvI GCAGC 4 cut(s) 24, 730, 733, 1555
BccI CCATC 8 cut(s) 220, 545, 551, 581, 851, 1007, 1227, 1697
BceAI ACGGC 1 cut(s) 301
BciT130I CCWGG 3 cut(s) 1631, 1638, 1680
BcoDI GTCTC 3 cut(s) 23, 672, 819
BfaI CTAG 2 cut(s) 809, 1464
BfmI CTRYAG 2 cut(s) 207, 1452
BfrI CTTAAG 1 cut(s) 683
BglII AGATCT 2 cut(s) 748, 862
BisI GCNGC 5 cut(s) 13, 719, 722, 1315, 1569
BlnI CCTAGG 1 cut(s) 1463
BlsI GCNGC 5 cut(s) 14, 720, 723, 1316, 1570
BmcAI AGTACT 1 cut(s) 647
Bme1390I CCNGG 3 cut(s) 1631, 1638, 1680
Bme18I GGWCC 3 cut(s) 448, 1349, 1634
BmgT120I GGNCC 4 cut(s) 448, 506, 1349, 1634
BmiI GGNNCC 7 cut(s) 297, 508, 658, 1513, 1635, 1821, 1832
BmrFI CCNGG 3 cut(s) 1631, 1638, 1680
BmrI ACTGGG 1 cut(s) 954
BmsI GCATC 4 cut(s) 475, 588, 1053, 1756
BmuI ACTGGG 1 cut(s) 954
BpmI CTGGAG 1 cut(s) 510
BpuEI CTTGAG 1 cut(s) 1340
BsaBI GATNNNNATC 1 cut(s) 861
BsaHI GRCGYC 1 cut(s) 321
BsaI GGTCTC 1 cut(s) 672
BsaJI CCNNGG 5 cut(s) 444, 796, 1463, 1615, 1630
BsaWI WCCGGW 2 cut(s) 418, 1415
BsaXI ACNNNNNCTCC 4 cut(s) 480, 510, 1596, 1626
Bsc4I CCNNNNNNNGG 4 cut(s) 317, 533, 944, 1580
Bse118I RCCGGY 1 cut(s) 1415
Bse1I ACTGG 8 cut(s) 339, 527, 548, 949, 1489, 1524, 1744, 1782
Bse3DI GCAATG 1 cut(s) 1527
Bse8I GATNNNNATC 1 cut(s) 861
BseBI CCWGG 3 cut(s) 1631, 1638, 1680
BseDI CCNNGG 5 cut(s) 444, 796, 1463, 1615, 1630
BseGI GGATG 4 cut(s) 592, 922, 1018, 1222
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 4 cut(s) 317, 533, 944, 1580
BseMI GCAATG 1 cut(s) 1527
BseMII CTCAG 5 cut(s) 398, 716, 1074, 1566, 1644
BseNI ACTGG 8 cut(s) 339, 527, 548, 949, 1489, 1524, 1744, 1782
BseRI GAGGAG 2 cut(s) 202, 1868
BseXI GCAGC 4 cut(s) 24, 730, 733, 1555
BsgI GTGCAG 1 cut(s) 1554
BshFI GGCC 2 cut(s) 507, 1620
BshNI GGYRCC 2 cut(s) 295, 656
BshTI ACCGGT 1 cut(s) 1415
BsiSI CCGG 3 cut(s) 405, 419, 1416
BslFI GGGAC 3 cut(s) 781, 1647, 1652
BslI CCNNNNNNNGG 4 cut(s) 317, 533, 944, 1580
BsmAI GTCTC 3 cut(s) 23, 672, 819
BsmFI GGGAC 3 cut(s) 781, 1647, 1652
BsmI GAATGC 1 cut(s) 907
BsnI GGCC 2 cut(s) 507, 1620
Bso31I GGTCTC 1 cut(s) 672
Bsp1407I TGTACA 1 cut(s) 1723
Bsp143I GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
Bsp19I CCATGG 1 cut(s) 796
BspACI CCGC 4 cut(s) 216, 230, 610, 1315
BspANI GGCC 2 cut(s) 507, 1620
BspCNI CTCAG 5 cut(s) 397, 717, 1075, 1567, 1645
BspHI TCATGA 1 cut(s) 1059
BspLI GGNNCC 7 cut(s) 297, 508, 658, 1513, 1635, 1821, 1832
BspPI GGATC 4 cut(s) 971, 1022, 1113, 1781
BspQI GCTCTTC 1 cut(s) 272
BspT107I GGYRCC 2 cut(s) 295, 656
BspTI CTTAAG 1 cut(s) 683
BspTNI GGTCTC 1 cut(s) 672
BsrDI GCAATG 1 cut(s) 1527
BsrFI RCCGGY 1 cut(s) 1415
BsrGI TGTACA 1 cut(s) 1723
BsrI ACTGG 8 cut(s) 339, 527, 548, 949, 1489, 1524, 1744, 1782
BssAI RCCGGY 1 cut(s) 1415
BssECI CCNNGG 5 cut(s) 444, 796, 1463, 1615, 1630
BssMI GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
BssNI GRCGYC 1 cut(s) 321
BssT1I CCWWGG 4 cut(s) 444, 796, 1463, 1615
Bst2UI CCWGG 3 cut(s) 1631, 1638, 1680
Bst4CI ACNGT 4 cut(s) 346, 380, 874, 1045
Bst6I CTCTTC 3 cut(s) 272, 636, 1281
BstACI GRCGYC 1 cut(s) 321
BstAFI CTTAAG 1 cut(s) 683
BstAUI TGTACA 1 cut(s) 1723
BstC8I GCNNGC 3 cut(s) 1151, 1186, 1566
BstDEI CTNAG 5 cut(s) 384, 725, 1083, 1575, 1653
BstDSI CCRYGG 1 cut(s) 796
BstF5I GGATG 4 cut(s) 592, 922, 1018, 1222
BstHHI GCGC 1 cut(s) 579
BstKTI GATC 9 cut(s) 675, 751, 865, 979, 1030, 1108, 1356, 1561, 1789
BstMAI GTCTC 3 cut(s) 23, 672, 819
BstMBI GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
BstMWI GCNNNNNNNGC 1 cut(s) 530
BstNI CCWGG 3 cut(s) 1631, 1638, 1680
BstNSI RCATGY 3 cut(s) 718, 1314, 1568
BstSCI CCNGG 3 cut(s) 1629, 1636, 1678
BstSFI CTRYAG 2 cut(s) 207, 1452
BstV1I GCAGC 4 cut(s) 24, 730, 733, 1555
BstX2I RGATCY 3 cut(s) 748, 862, 1105
BstXI CCANNNNNNTGG 1 cut(s) 337
BstYI RGATCY 3 cut(s) 748, 862, 1105
BsuRI GGCC 2 cut(s) 507, 1620
BtgI CCRYGG 1 cut(s) 796
BtsCI GGATG 4 cut(s) 592, 922, 1018, 1222
BtsI GCAGTG 1 cut(s) 915
BtsIMutI CAGTG 7 cut(s) 332, 541, 915, 942, 1482, 1517, 1789
Cac8I GCNNGC 3 cut(s) 1151, 1186, 1566
CaiI CAGNNNCTG 3 cut(s) 533, 724, 1055
CciI TCATGA 1 cut(s) 1059
CfoI GCGC 1 cut(s) 579
Cfr10I RCCGGY 1 cut(s) 1415
Cfr13I GGNCC 4 cut(s) 448, 506, 1349, 1634
CseI GACGC 2 cut(s) 236, 310
CsiI ACCWGGT 1 cut(s) 1636
Csp6I GTAC 4 cut(s) 373, 646, 1046, 1724
CspAI ACCGGT 1 cut(s) 1415
CviQI GTAC 4 cut(s) 373, 646, 1046, 1724
DdeI CTNAG 5 cut(s) 384, 725, 1083, 1575, 1653
DpnI GATC 9 cut(s) 674, 750, 864, 978, 1029, 1107, 1355, 1560, 1788
DpnII GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
DrdI GACNNNNNNGTC 1 cut(s) 455
DseDI GACNNNNNNGTC 1 cut(s) 455
Eam1104I CTCTTC 3 cut(s) 272, 636, 1281
EarI CTCTTC 3 cut(s) 272, 636, 1281
EciI GGCGGA 1 cut(s) 245
Eco130I CCWWGG 4 cut(s) 444, 796, 1463, 1615
Eco147I AGGCCT 1 cut(s) 1620
Eco31I GGTCTC 1 cut(s) 672
Eco32I GATATC 1 cut(s) 539
Eco47I GGWCC 3 cut(s) 448, 1349, 1634
Eco57I CTGAAG 2 cut(s) 296, 1674
EcoO109I RGGNCCY 2 cut(s) 448, 1634
EcoRII CCWGG 3 cut(s) 1629, 1636, 1678
EcoRV GATATC 1 cut(s) 539
EcoT14I CCWWGG 4 cut(s) 444, 796, 1463, 1615
EcoT22I ATGCAT 2 cut(s) 1026, 1068
ErhI CCWWGG 4 cut(s) 444, 796, 1463, 1615
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 3 cut(s) 781, 1647, 1652
FauI CCCGC 1 cut(s) 617
FauNDI CATATG 4 cut(s) 601, 757, 985, 1825
Fnu4HI GCNGC 5 cut(s) 13, 719, 722, 1315, 1569
FokI GGATG 4 cut(s) 599, 909, 1025, 1229
Fsp4HI GCNGC 5 cut(s) 13, 719, 722, 1315, 1569
FspAI RTGCGCAY 1 cut(s) 578
FspBI CTAG 2 cut(s) 809, 1464
FspI TGCGCA 1 cut(s) 578
GlaI GCGC 1 cut(s) 578
GluI GCNGC 5 cut(s) 13, 719, 722, 1315, 1569
GsuI CTGGAG 1 cut(s) 510
HaeIII GGCC 2 cut(s) 507, 1620
HapII CCGG 3 cut(s) 405, 419, 1416
HgaI GACGC 2 cut(s) 236, 310
HhaI GCGC 1 cut(s) 579
Hin1I GRCGYC 1 cut(s) 321
Hin6I GCGC 1 cut(s) 577
HinP1I GCGC 1 cut(s) 577
HincII GTYRAC 1 cut(s) 934
HindII GTYRAC 1 cut(s) 934
HindIII AAGCTT 1 cut(s) 1364
HinfI GANTC 5 cut(s) 301, 565, 1324, 1401, 1445
HpaII CCGG 3 cut(s) 405, 419, 1416
HphI GGTGA 5 cut(s) 316, 383, 785, 1480, 1549
Hpy166II GTNNAC 6 cut(s) 157, 340, 701, 712, 934, 957
Hpy188I TCNGA 8 cut(s) 306, 677, 820, 1124, 1232, 1444, 1654, 1693
Hpy188III TCNNGA 7 cut(s) 241, 251, 473, 851, 1060, 1328, 1357
Hpy8I GTNNAC 6 cut(s) 157, 340, 701, 712, 934, 957
HpyAV CCTTC 7 cut(s) 259, 922, 1139, 1208, 1482, 1528, 1849
HpyCH4III ACNGT 4 cut(s) 346, 380, 874, 1045
HpyCH4IV ACGT 2 cut(s) 628, 1611
HpyF10VI GCNNNNNNNGC 1 cut(s) 530
HpyF3I CTNAG 5 cut(s) 384, 725, 1083, 1575, 1653
HpySE526I ACGT 2 cut(s) 628, 1611
Hsp92I GRCGYC 1 cut(s) 321
HspAI GCGC 1 cut(s) 577
Kzo9I GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
LguI GCTCTTC 1 cut(s) 272
LmnI GCTCC 4 cut(s) 421, 529, 1057, 1855
Lsp1109I GCAGC 4 cut(s) 24, 730, 733, 1555
LweI GCATC 4 cut(s) 475, 588, 1053, 1756
MabI ACCWGGT 1 cut(s) 1636
MaeI CTAG 2 cut(s) 809, 1464
MaeII ACGT 2 cut(s) 628, 1611
MaeIII GTNAC 6 cut(s) 248, 322, 773, 988, 1537, 1846
MalI GATC 9 cut(s) 674, 750, 864, 978, 1029, 1107, 1355, 1560, 1788
MboI GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
MfeI CAATTG 2 cut(s) 1797, 1859
MflI RGATCY 3 cut(s) 748, 862, 1105
MluCI AATT 9 cut(s) 662, 1002, 1095, 1249, 1436, 1593, 1752, 1797, 1859
MmeI TCCRAC 2 cut(s) 864, 1582
Mph1103I ATGCAT 2 cut(s) 1026, 1068
MseI TTAA 5 cut(s) 633, 684, 1140, 1304, 1409
MslI CAYNNNNRTG 3 cut(s) 255, 293, 335
MspA1I CMGCKG 2 cut(s) 724, 1451
MspCI CTTAAG 1 cut(s) 683
MspI CCGG 3 cut(s) 405, 419, 1416
MspR9I CCNGG 3 cut(s) 1631, 1638, 1680
MunI CAATTG 2 cut(s) 1797, 1859
Mva1269I GAATGC 1 cut(s) 907
MvaI CCWGG 3 cut(s) 1631, 1638, 1680
MwoI GCNNNNNNNGC 1 cut(s) 530
NcoI CCATGG 1 cut(s) 796
NdeI CATATG 4 cut(s) 601, 757, 985, 1825
NdeII GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
NlaIV GGNNCC 7 cut(s) 297, 508, 658, 1513, 1635, 1821, 1832
NmeAIII GCCGAG 1 cut(s) 336
NmuCI GTSAC 5 cut(s) 248, 322, 988, 1537, 1846
NsbI TGCGCA 1 cut(s) 578
NsiI ATGCAT 2 cut(s) 1026, 1068
NspI RCATGY 3 cut(s) 718, 1314, 1568
OliI CACNNNNGTG 1 cut(s) 335
PaeI GCATGC 1 cut(s) 1568
PagI TCATGA 1 cut(s) 1059
PceI AGGCCT 1 cut(s) 1620
PciSI GCTCTTC 1 cut(s) 272
PctI GAATGC 1 cut(s) 907
PfeI GAWTC 5 cut(s) 301, 565, 1324, 1401, 1445
PflFI GACNNNGTC 1 cut(s) 1340
PflMI CCANNNNNTGG 1 cut(s) 533
PinAI ACCGGT 1 cut(s) 1415
PkrI GCNGC 5 cut(s) 14, 720, 723, 1316, 1570
PpuMI RGGWCCY 2 cut(s) 448, 1634
Psp5II RGGWCCY 2 cut(s) 448, 1634
Psp6I CCWGG 3 cut(s) 1629, 1636, 1678
PspGI CCWGG 3 cut(s) 1629, 1636, 1678
PspN4I GGNNCC 7 cut(s) 297, 508, 658, 1513, 1635, 1821, 1832
PspPI GGNCC 4 cut(s) 448, 506, 1349, 1634
PspPPI RGGWCCY 2 cut(s) 448, 1634
PsrI GAACNNNNNNTAC 2 cut(s) 1633, 1665
PstNI CAGNNNCTG 3 cut(s) 533, 724, 1055
PsuI RGATCY 3 cut(s) 748, 862, 1105
PsyI GACNNNGTC 1 cut(s) 1340
PvuII CAGCTG 2 cut(s) 724, 1451
RsaI GTAC 4 cut(s) 374, 647, 1047, 1725
RsaNI GTAC 4 cut(s) 373, 646, 1046, 1724
RseI CAYNNNNRTG 3 cut(s) 255, 293, 335
SapI GCTCTTC 1 cut(s) 272
SaqAI TTAA 5 cut(s) 633, 684, 1140, 1304, 1409
SatI GCNGC 5 cut(s) 13, 719, 722, 1315, 1569
Sau3AI GATC 9 cut(s) 672, 748, 862, 976, 1027, 1105, 1353, 1558, 1786
Sau96I GGNCC 4 cut(s) 448, 506, 1349, 1634
ScaI AGTACT 1 cut(s) 647
ScrFI CCNGG 3 cut(s) 1631, 1638, 1680
SexAI ACCWGGT 1 cut(s) 1636
SfaNI GCATC 4 cut(s) 475, 588, 1053, 1756
SfcI CTRYAG 2 cut(s) 207, 1452
SinI GGWCC 3 cut(s) 448, 1349, 1634
SmiMI CAYNNNNRTG 3 cut(s) 255, 293, 335
SmlI CTYRAG 2 cut(s) 683, 1319
SmoI CTYRAG 2 cut(s) 683, 1319
SphI GCATGC 1 cut(s) 1568
Sse9I AATT 9 cut(s) 662, 1002, 1095, 1249, 1436, 1593, 1752, 1797, 1859
SseBI AGGCCT 1 cut(s) 1620
SsiI CCGC 4 cut(s) 216, 230, 610, 1315
SspMI CTAG 2 cut(s) 809, 1464
StuI AGGCCT 1 cut(s) 1620
StyD4I CCNGG 3 cut(s) 1629, 1636, 1678
StyI CCWWGG 4 cut(s) 444, 796, 1463, 1615
TaaI ACNGT 4 cut(s) 346, 380, 874, 1045
TaiI ACGT 2 cut(s) 631, 1614
TaqI TCGA 1 cut(s) 240
TaqII GACCGA 1 cut(s) 1366
TasI AATT 9 cut(s) 662, 1002, 1095, 1249, 1436, 1593, 1752, 1797, 1859
TatI WGTACW 2 cut(s) 645, 1723
TauI GCSGC 1 cut(s) 1317
TfiI GAWTC 5 cut(s) 301, 565, 1324, 1401, 1445
Tru1I TTAA 5 cut(s) 633, 684, 1140, 1304, 1409
Tru9I TTAA 5 cut(s) 633, 684, 1140, 1304, 1409
TscAI CASTG 7 cut(s) 339, 548, 922, 949, 1489, 1524, 1789
TseFI GTSAC 5 cut(s) 248, 322, 988, 1537, 1846
TseI GCWGC 4 cut(s) 12, 718, 721, 1568
Tsp45I GTSAC 5 cut(s) 248, 322, 988, 1537, 1846
TspDTI ATGAA 9 cut(s) 557, 683, 744, 1009, 1090, 1185, 1246, 1604, 1745
TspRI CASTG 7 cut(s) 339, 548, 922, 949, 1489, 1524, 1789
Tth111I GACNNNGTC 1 cut(s) 1340
Van91I CCANNNNNTGG 1 cut(s) 533
Vha464I CTTAAG 1 cut(s) 683
VpaK11BI GGWCC 3 cut(s) 448, 1349, 1634
XapI RAATTY 1 cut(s) 662
XceI RCATGY 3 cut(s) 718, 1314, 1568
XmaJI CCTAGG 1 cut(s) 1463
XspI CTAG 2 cut(s) 809, 1464
ZrmI AGTACT 1 cut(s) 647
Zsp2I ATGCAT 2 cut(s) 1026, 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.