Rh1DG014400

Carotenoid 9,10(9',10')-cleavage dioxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0008044
Physical Location & Seq
Reverse (-)
2337346 .. 2359330
21985 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG014400.1

Sequence Viewer

Length: 1659 bp
ATGGCGGAGGTGGTCGAGAAGCGTCACGATGATGATGTGAAGGAGAAGCTGAAGAGCAACGGCATAGTGGTGCCGAATCCGAAGCCGAGCAAGGGCGTCACCTCCACACTGGTGGACACGGTTGAGAAGCTCATTGTCAAGTTGATGTACGACAGTTCTCAGCCTCACCACTATCTCGCCGGAAACTTTGCTCCGGTTATTGAGGAAACGCCTCCCACCAAGGACCTCCATGTCATCGGGCATCTTCCTGATTGCTTGAATGGAGAGTTTGTAAGGGTTGGCCCCAACCCCAAGTTTGCTCCAGTTGCTGGATATCACTGGTTTGATGGAGATGGTATGATTCATGGTATGCGCATCAAGGATGGGAAAGCAACATATGTTTCCCGCTATGTAAAGACATCACGTCTTAAGCAAGAAGAGTACTTTGGAGGTGCCAAATTTATGAAGATCGGAGACCTTAAGGGGCTTTTTGGTTTACTTATGGTTTACATGCAGCAGCTGAGAGCTAAACTGAAAGTGTTCGATCTTTCATATGGACATGGGACAGGTAACACAGCTCTCATATATCACCATGGGAAACTTCTAGCTCTTTCAGAGGGAGACAAACCTTATGTTCTCAAAGTTCTGGAAGATGGAGATCTGCAAACAGTTGGCTTGTTGGATTATGACAAGAGATTGAAGCATTCCTTCACTGCTCATCCAAAGGTTGACCCTTTCACTGGGGAGATGTTTACATTTGGCTATTCGCATGATCCACCATATGTCACATACAGAGTAATTTCAAAGGATGGTTTCATGCATGATCCTATACCTATAACAGTACCAGCTCCTGTCATGATGCATGATTTTGCCATTACTGAGAACTATGCAATTTTCATGGATCTTCCCTTGTATTTCAAACCAAAGGAAATGGTTAAGGAAGGCAAGCTGATATTCTCATTTGATGAAACAAAAAAAGCTCGCTTTGGTGTCCTTCCACGTTATGCAAAGGATGATTTGCTAATCAGATGGTTTGAGCTTCCAAATTGCTTCATTTTCCATAATGCTAATGCTTGGGAGGAAGAGGACGAAGTTGTTTTAATGACATGCCGCCTTGAGAATCCAGATTTAGACATGGTCAATGGACCTATCAAGAAAAAGCTTGACAACTTCAAAAATGAGCTGTATGAGATGAGATTCAACTTAAAAACCGGTTTAGCAACACAGAAGAAATTATCAGAATCAGCTGTAGATTTTCCTAGGGTGAATGAGAGCTACACTGGAAGGAAGCAACGCTATGTCTATGGAACCACACTGGATAGCATTGCGAAGGTGACAGGGATAGTCAAGTTTGATCTGCATGCTGCACCTGAGATTGGAAAAACGAAAATTGAGGTTGGAGGAAACGTCCAAGGCCTTTATGACCTGGGACCTGGTAGATTTGGTTCTGAGGCTATTTTTGTCCCCCGTGTTCCTGGTACTACTTCAGAAGAAGATGATGGCTACTTGATATTCTTTGTACATGATGAGAATACTGGAAAATCAGCAATTCATGTACTAGATGCAAAAACAATGTCCAGTGATCCTGTTGCAATTGTTGAGTTGCCCCACAGAGTTCCATATGGGTTCCATGCCTTCTTTGTGACAGAGGAGCAATTGCAAGAACAAGCAAACTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RPE65

Protein Analysis

552

Amino Acids

62.38

Weight (kDa)

6.17

Isoelectric Point (pI)

29.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPE65 PF03055 63 - 541 2.8e-144 Retinal pigment epithelial membrane protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 230
Acc16I TGCGCA 1 cut(s) 353
AccB1I GGYRCC 2 cut(s) 70, 431
AccB7I CCANNNNNTGG 1 cut(s) 308
AciI CCGC 3 cut(s) 5, 385, 1090
AclWI GGATC 4 cut(s) 746, 797, 888, 1556
AcsI RAATTY 1 cut(s) 437
AcuI CTGAAG 2 cut(s) 71, 1449
AcyI GRCGYC 1 cut(s) 96
AfaI GTAC 6 cut(s) 149, 422, 822, 1459, 1500, 1536
AfiI CCNNNNNNNGG 4 cut(s) 92, 308, 719, 1355
AflII CTTAAG 2 cut(s) 407, 458
AgeI ACCGGT 1 cut(s) 1190
AgsI TTSAA 6 cut(s) 259, 679, 783, 898, 1153, 1180
AhdI GACNNNNNGTC 1 cut(s) 402
AjiI CACGTC 1 cut(s) 404
AjnI CCWGG 3 cut(s) 1404, 1411, 1453
AjuI GAANNNNNNNTTGG 2 cut(s) 408, 440
AleI CACNNNNGTG 1 cut(s) 110
Alw26I GTCTC 2 cut(s) 447, 594
AlwI GGATC 4 cut(s) 746, 797, 888, 1556
AlwNI CAGNNNCTG 3 cut(s) 308, 499, 830
AoxI GGCC 2 cut(s) 280, 1393
ApeKI GCWGC 3 cut(s) 493, 496, 1343
ApoI RAATTY 1 cut(s) 437
ArsI GACNNNNNNTTYG 2 cut(s) 1538, 1570
AsiGI ACCGGT 1 cut(s) 1190
Asp700I GAANNNNTTC 1 cut(s) 518
AspA2I CCTAGG 1 cut(s) 1238
AspLEI GCGC 1 cut(s) 354
AspS9I GGNCC 4 cut(s) 223, 281, 1124, 1409
AsuHPI GGTGA 5 cut(s) 91, 158, 560, 1255, 1324
AvaII GGWCC 3 cut(s) 223, 1124, 1409
AvrII CCTAGG 1 cut(s) 1238
BanI GGYRCC 2 cut(s) 70, 431
BbvI GCAGC 3 cut(s) 505, 508, 1330
BccI CCATC 7 cut(s) 320, 326, 356, 626, 782, 1002, 1472
BceAI ACGGC 1 cut(s) 76
BciT130I CCWGG 3 cut(s) 1406, 1413, 1455
BcoDI GTCTC 2 cut(s) 447, 594
BfaI CTAG 3 cut(s) 584, 1239, 1538
BfmI CTRYAG 1 cut(s) 1227
BfrI CTTAAG 2 cut(s) 407, 458
BglII AGATCT 1 cut(s) 637
BisI GCNGC 4 cut(s) 494, 497, 1090, 1344
BlnI CCTAGG 1 cut(s) 1238
BlsI GCNGC 4 cut(s) 495, 498, 1091, 1345
BmcAI AGTACT 1 cut(s) 422
Bme1390I CCNGG 3 cut(s) 1406, 1413, 1455
Bme18I GGWCC 3 cut(s) 223, 1124, 1409
BmeRI GACNNNNNGTC 1 cut(s) 402
BmgBI CACGTC 1 cut(s) 404
BmgT120I GGNCC 4 cut(s) 223, 281, 1124, 1409
BmiI GGNNCC 6 cut(s) 72, 283, 433, 1288, 1410, 1607
BmrFI CCNGG 3 cut(s) 1406, 1413, 1455
BmrI ACTGGG 1 cut(s) 729
BmsI GCATC 4 cut(s) 250, 363, 828, 1531
BmuI ACTGGG 1 cut(s) 729
BpmI CTGGAG 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 1115
BsaBI GATNNNNATC 1 cut(s) 636
BsaHI GRCGYC 1 cut(s) 96
BsaI GGTCTC 1 cut(s) 447
BsaJI CCNNGG 5 cut(s) 219, 571, 1238, 1390, 1405
BsaWI WCCGGW 2 cut(s) 193, 1190
BsaXI ACNNNNNCTCC 4 cut(s) 255, 285, 1371, 1401
Bsc4I CCNNNNNNNGG 4 cut(s) 92, 308, 719, 1355
Bse118I RCCGGY 1 cut(s) 1190
Bse1I ACTGG 8 cut(s) 114, 302, 323, 724, 1264, 1299, 1519, 1557
Bse3DI GCAATG 1 cut(s) 1302
Bse8I GATNNNNATC 1 cut(s) 636
BseBI CCWGG 3 cut(s) 1406, 1413, 1455
BseDI CCNNGG 5 cut(s) 219, 571, 1238, 1390, 1405
BseGI GGATG 4 cut(s) 367, 697, 793, 997
BseJI GATNNNNATC 1 cut(s) 636
BseLI CCNNNNNNNGG 4 cut(s) 92, 308, 719, 1355
BseMI GCAATG 1 cut(s) 1302
BseMII CTCAG 5 cut(s) 173, 491, 849, 1341, 1419
BseNI ACTGG 8 cut(s) 114, 302, 323, 724, 1264, 1299, 1519, 1557
BseRI GAGGAG 1 cut(s) 1643
BseXI GCAGC 3 cut(s) 505, 508, 1330
BsgI GTGCAG 1 cut(s) 1329
BshFI GGCC 2 cut(s) 282, 1395
BshNI GGYRCC 2 cut(s) 70, 431
BshTI ACCGGT 1 cut(s) 1190
BsiSI CCGG 3 cut(s) 180, 194, 1191
BslFI GGGAC 3 cut(s) 556, 1422, 1427
BslI CCNNNNNNNGG 4 cut(s) 92, 308, 719, 1355
BsmAI GTCTC 2 cut(s) 447, 594
BsmFI GGGAC 3 cut(s) 556, 1422, 1427
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 2 cut(s) 282, 1395
Bso31I GGTCTC 1 cut(s) 447
Bsp1407I TGTACA 1 cut(s) 1498
Bsp143I GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
Bsp19I CCATGG 1 cut(s) 571
BspACI CCGC 3 cut(s) 5, 385, 1090
BspANI GGCC 2 cut(s) 282, 1395
BspCNI CTCAG 5 cut(s) 172, 492, 850, 1342, 1420
BspHI TCATGA 1 cut(s) 834
BspLI GGNNCC 6 cut(s) 72, 283, 433, 1288, 1410, 1607
BspPI GGATC 4 cut(s) 746, 797, 888, 1556
BspQI GCTCTTC 1 cut(s) 47
BspT107I GGYRCC 2 cut(s) 70, 431
BspTI CTTAAG 2 cut(s) 407, 458
BspTNI GGTCTC 1 cut(s) 447
BsrDI GCAATG 1 cut(s) 1302
BsrFI RCCGGY 1 cut(s) 1190
BsrGI TGTACA 1 cut(s) 1498
BsrI ACTGG 8 cut(s) 114, 302, 323, 724, 1264, 1299, 1519, 1557
BssAI RCCGGY 1 cut(s) 1190
BssECI CCNNGG 5 cut(s) 219, 571, 1238, 1390, 1405
BssMI GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
BssNI GRCGYC 1 cut(s) 96
BssT1I CCWWGG 4 cut(s) 219, 571, 1238, 1390
Bst2UI CCWGG 3 cut(s) 1406, 1413, 1455
Bst4CI ACNGT 4 cut(s) 121, 155, 649, 820
Bst6I CTCTTC 3 cut(s) 47, 411, 1056
BstACI GRCGYC 1 cut(s) 96
BstAFI CTTAAG 2 cut(s) 407, 458
BstAUI TGTACA 1 cut(s) 1498
BstC8I GCNNGC 3 cut(s) 926, 961, 1341
BstDEI CTNAG 5 cut(s) 159, 500, 858, 1350, 1428
BstDSI CCRYGG 1 cut(s) 571
BstF5I GGATG 4 cut(s) 367, 697, 793, 997
BstHHI GCGC 1 cut(s) 354
BstKTI GATC 8 cut(s) 450, 526, 640, 754, 805, 883, 1336, 1564
BstMAI GTCTC 2 cut(s) 447, 594
BstMBI GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
BstMWI GCNNNNNNNGC 1 cut(s) 305
BstNI CCWGG 3 cut(s) 1406, 1413, 1455
BstNSI RCATGY 3 cut(s) 493, 1089, 1343
BstSCI CCNGG 3 cut(s) 1404, 1411, 1453
BstSFI CTRYAG 1 cut(s) 1227
BstV1I GCAGC 3 cut(s) 505, 508, 1330
BstX2I RGATCY 2 cut(s) 637, 880
BstXI CCANNNNNNTGG 1 cut(s) 112
BstYI RGATCY 2 cut(s) 637, 880
BsuRI GGCC 2 cut(s) 282, 1395
BtgI CCRYGG 1 cut(s) 571
BtrI CACGTC 1 cut(s) 404
BtsCI GGATG 4 cut(s) 367, 697, 793, 997
BtsI GCAGTG 1 cut(s) 690
BtsIMutI CAGTG 7 cut(s) 107, 316, 690, 717, 1257, 1292, 1564
Cac8I GCNNGC 3 cut(s) 926, 961, 1341
CaiI CAGNNNCTG 3 cut(s) 308, 499, 830
CciI TCATGA 1 cut(s) 834
CfoI GCGC 1 cut(s) 354
Cfr10I RCCGGY 1 cut(s) 1190
Cfr13I GGNCC 4 cut(s) 223, 281, 1124, 1409
CseI GACGC 2 cut(s) 11, 85
CsiI ACCWGGT 1 cut(s) 1411
Csp6I GTAC 6 cut(s) 148, 421, 821, 1458, 1499, 1535
CspAI ACCGGT 1 cut(s) 1190
CviQI GTAC 6 cut(s) 148, 421, 821, 1458, 1499, 1535
DdeI CTNAG 5 cut(s) 159, 500, 858, 1350, 1428
DpnI GATC 8 cut(s) 449, 525, 639, 753, 804, 882, 1335, 1563
DpnII GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
DrdI GACNNNNNNGTC 1 cut(s) 230
DriI GACNNNNNGTC 1 cut(s) 402
DseDI GACNNNNNNGTC 1 cut(s) 230
Eam1104I CTCTTC 3 cut(s) 47, 411, 1056
Eam1105I GACNNNNNGTC 1 cut(s) 402
EarI CTCTTC 3 cut(s) 47, 411, 1056
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 4 cut(s) 219, 571, 1238, 1390
Eco147I AGGCCT 1 cut(s) 1395
Eco31I GGTCTC 1 cut(s) 447
Eco32I GATATC 1 cut(s) 314
Eco47I GGWCC 3 cut(s) 223, 1124, 1409
Eco57I CTGAAG 2 cut(s) 71, 1449
EcoO109I RGGNCCY 2 cut(s) 223, 1409
EcoRII CCWGG 3 cut(s) 1404, 1411, 1453
EcoRV GATATC 1 cut(s) 314
EcoT14I CCWWGG 4 cut(s) 219, 571, 1238, 1390
EcoT22I ATGCAT 2 cut(s) 801, 843
ErhI CCWWGG 4 cut(s) 219, 571, 1238, 1390
FalI AAGNNNNNCTT 2 cut(s) 671, 703
FaqI GGGAC 3 cut(s) 556, 1422, 1427
FauI CCCGC 1 cut(s) 392
FauNDI CATATG 4 cut(s) 376, 532, 760, 1600
Fnu4HI GCNGC 4 cut(s) 494, 497, 1090, 1344
FokI GGATG 4 cut(s) 374, 684, 800, 1004
Fsp4HI GCNGC 4 cut(s) 494, 497, 1090, 1344
FspAI RTGCGCAY 1 cut(s) 353
FspBI CTAG 3 cut(s) 584, 1239, 1538
FspI TGCGCA 1 cut(s) 353
GlaI GCGC 1 cut(s) 353
GluI GCNGC 4 cut(s) 494, 497, 1090, 1344
GsuI CTGGAG 1 cut(s) 285
HaeIII GGCC 2 cut(s) 282, 1395
HapII CCGG 3 cut(s) 180, 194, 1191
HgaI GACGC 2 cut(s) 11, 85
HhaI GCGC 1 cut(s) 354
Hin1I GRCGYC 1 cut(s) 96
Hin6I GCGC 1 cut(s) 352
HinP1I GCGC 1 cut(s) 352
HincII GTYRAC 1 cut(s) 709
HindII GTYRAC 1 cut(s) 709
HindIII AAGCTT 1 cut(s) 1139
HinfI GANTC 5 cut(s) 76, 340, 1099, 1176, 1220
HpaII CCGG 3 cut(s) 180, 194, 1191
HphI GGTGA 5 cut(s) 91, 158, 560, 1255, 1324
Hpy166II GTNNAC 5 cut(s) 115, 476, 487, 709, 732
Hpy188I TCNGA 7 cut(s) 81, 452, 595, 1007, 1219, 1429, 1468
Hpy188III TCNNGA 7 cut(s) 16, 26, 248, 626, 835, 1103, 1132
Hpy8I GTNNAC 5 cut(s) 115, 476, 487, 709, 732
HpyAV CCTTC 7 cut(s) 34, 697, 914, 983, 1257, 1303, 1624
HpyCH4III ACNGT 4 cut(s) 121, 155, 649, 820
HpyCH4IV ACGT 3 cut(s) 403, 979, 1386
HpyF10VI GCNNNNNNNGC 1 cut(s) 305
HpyF3I CTNAG 5 cut(s) 159, 500, 858, 1350, 1428
HpySE526I ACGT 3 cut(s) 403, 979, 1386
Hsp92I GRCGYC 1 cut(s) 96
HspAI GCGC 1 cut(s) 352
Kzo9I GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
LguI GCTCTTC 1 cut(s) 47
LmnI GCTCC 4 cut(s) 196, 304, 832, 1630
Lsp1109I GCAGC 3 cut(s) 505, 508, 1330
LweI GCATC 4 cut(s) 250, 363, 828, 1531
MabI ACCWGGT 1 cut(s) 1411
MaeI CTAG 3 cut(s) 584, 1239, 1538
MaeII ACGT 3 cut(s) 403, 979, 1386
MaeIII GTNAC 6 cut(s) 23, 97, 548, 763, 1312, 1621
MalI GATC 8 cut(s) 449, 525, 639, 753, 804, 882, 1335, 1563
MboI GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
MfeI CAATTG 2 cut(s) 1572, 1634
MflI RGATCY 2 cut(s) 637, 880
MluCI AATT 9 cut(s) 437, 777, 870, 1024, 1211, 1368, 1527, 1572, 1634
MmeI TCCRAC 2 cut(s) 639, 1357
Mph1103I ATGCAT 2 cut(s) 801, 843
MroXI GAANNNNTTC 1 cut(s) 518
MseI TTAA 5 cut(s) 408, 459, 915, 1079, 1184
MslI CAYNNNNRTG 3 cut(s) 30, 68, 110
MspA1I CMGCKG 2 cut(s) 499, 1226
MspCI CTTAAG 2 cut(s) 407, 458
MspI CCGG 3 cut(s) 180, 194, 1191
MspR9I CCNGG 3 cut(s) 1406, 1413, 1455
MunI CAATTG 2 cut(s) 1572, 1634
Mva1269I GAATGC 1 cut(s) 682
MvaI CCWGG 3 cut(s) 1406, 1413, 1455
MwoI GCNNNNNNNGC 1 cut(s) 305
NcoI CCATGG 1 cut(s) 571
NdeI CATATG 4 cut(s) 376, 532, 760, 1600
NdeII GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
NlaIV GGNNCC 6 cut(s) 72, 283, 433, 1288, 1410, 1607
NmeAIII GCCGAG 1 cut(s) 111
NmuCI GTSAC 5 cut(s) 23, 97, 763, 1312, 1621
NsbI TGCGCA 1 cut(s) 353
NsiI ATGCAT 2 cut(s) 801, 843
NspI RCATGY 3 cut(s) 493, 1089, 1343
OliI CACNNNNGTG 1 cut(s) 110
PaeI GCATGC 1 cut(s) 1343
PagI TCATGA 1 cut(s) 834
PceI AGGCCT 1 cut(s) 1395
PciSI GCTCTTC 1 cut(s) 47
PctI GAATGC 1 cut(s) 682
PdmI GAANNNNTTC 1 cut(s) 518
PfeI GAWTC 5 cut(s) 76, 340, 1099, 1176, 1220
PflFI GACNNNGTC 1 cut(s) 1115
PflMI CCANNNNNTGG 1 cut(s) 308
PinAI ACCGGT 1 cut(s) 1190
PkrI GCNGC 4 cut(s) 495, 498, 1091, 1345
PpuMI RGGWCCY 2 cut(s) 223, 1409
Psp5II RGGWCCY 2 cut(s) 223, 1409
Psp6I CCWGG 3 cut(s) 1404, 1411, 1453
PspGI CCWGG 3 cut(s) 1404, 1411, 1453
PspN4I GGNNCC 6 cut(s) 72, 283, 433, 1288, 1410, 1607
PspPI GGNCC 4 cut(s) 223, 281, 1124, 1409
PspPPI RGGWCCY 2 cut(s) 223, 1409
PsrI GAACNNNNNNTAC 2 cut(s) 1408, 1440
PstNI CAGNNNCTG 3 cut(s) 308, 499, 830
PsuI RGATCY 2 cut(s) 637, 880
PsyI GACNNNGTC 1 cut(s) 1115
PvuII CAGCTG 2 cut(s) 499, 1226
RsaI GTAC 6 cut(s) 149, 422, 822, 1459, 1500, 1536
RsaNI GTAC 6 cut(s) 148, 421, 821, 1458, 1499, 1535
RseI CAYNNNNRTG 3 cut(s) 30, 68, 110
SapI GCTCTTC 1 cut(s) 47
SaqAI TTAA 5 cut(s) 408, 459, 915, 1079, 1184
SatI GCNGC 4 cut(s) 494, 497, 1090, 1344
Sau3AI GATC 8 cut(s) 447, 523, 637, 751, 802, 880, 1333, 1561
Sau96I GGNCC 4 cut(s) 223, 281, 1124, 1409
ScaI AGTACT 1 cut(s) 422
ScrFI CCNGG 3 cut(s) 1406, 1413, 1455
SexAI ACCWGGT 1 cut(s) 1411
SfaNI GCATC 4 cut(s) 250, 363, 828, 1531
SfcI CTRYAG 1 cut(s) 1227
SinI GGWCC 3 cut(s) 223, 1124, 1409
SmiMI CAYNNNNRTG 3 cut(s) 30, 68, 110
SmlI CTYRAG 3 cut(s) 407, 458, 1094
SmoI CTYRAG 3 cut(s) 407, 458, 1094
SphI GCATGC 1 cut(s) 1343
Sse9I AATT 9 cut(s) 437, 777, 870, 1024, 1211, 1368, 1527, 1572, 1634
SseBI AGGCCT 1 cut(s) 1395
SsiI CCGC 3 cut(s) 5, 385, 1090
SspMI CTAG 3 cut(s) 584, 1239, 1538
StuI AGGCCT 1 cut(s) 1395
StyD4I CCNGG 3 cut(s) 1404, 1411, 1453
StyI CCWWGG 4 cut(s) 219, 571, 1238, 1390
TaaI ACNGT 4 cut(s) 121, 155, 649, 820
TaiI ACGT 3 cut(s) 406, 982, 1389
TaqI TCGA 2 cut(s) 15, 522
TasI AATT 9 cut(s) 437, 777, 870, 1024, 1211, 1368, 1527, 1572, 1634
TatI WGTACW 3 cut(s) 420, 1498, 1534
TauI GCSGC 1 cut(s) 1092
TfiI GAWTC 5 cut(s) 76, 340, 1099, 1176, 1220
Tru1I TTAA 5 cut(s) 408, 459, 915, 1079, 1184
Tru9I TTAA 5 cut(s) 408, 459, 915, 1079, 1184
TscAI CASTG 7 cut(s) 114, 323, 697, 724, 1264, 1299, 1564
TseFI GTSAC 5 cut(s) 23, 97, 763, 1312, 1621
TseI GCWGC 3 cut(s) 493, 496, 1343
Tsp45I GTSAC 5 cut(s) 23, 97, 763, 1312, 1621
TspDTI ATGAA 8 cut(s) 332, 458, 519, 784, 865, 960, 1021, 1520
TspRI CASTG 7 cut(s) 114, 323, 697, 724, 1264, 1299, 1564
Tth111I GACNNNGTC 1 cut(s) 1115
Van91I CCANNNNNTGG 1 cut(s) 308
Vha464I CTTAAG 2 cut(s) 407, 458
VpaK11BI GGWCC 3 cut(s) 223, 1124, 1409
XapI RAATTY 1 cut(s) 437
XceI RCATGY 3 cut(s) 493, 1089, 1343
XmaJI CCTAGG 1 cut(s) 1238
XmnI GAANNNNTTC 1 cut(s) 518
XspI CTAG 3 cut(s) 584, 1239, 1538
ZrmI AGTACT 1 cut(s) 422
Zsp2I ATGCAT 2 cut(s) 801, 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.