RchiOBHm_Chr1g0356801

Protein of unknown function (DUF3522)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0003810
Physical Location & Seq
Reverse (-)
49170741 .. 49178370
7630 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58211

Sequence Viewer

Length: 2532 bp
ATGGTTTCAAATTCGATTCTTTGCTCCTCTCCCTCTATGAATCTCGGTCTTTTCCTTCTTTTTATATCCTTATTCGGACACTGTTATTCCTACGACGAACTGGGTCCTTCCACAAACAGCTTCACAGTTTCCAGCTTCAGCTACCCACCTACACTGCTCAAGAACTCTAATTTTCGCTATATTAGAGTTGAACTGCCACCATGGTTCTCTTCAATGTCTATAGCAATGAACTCGAACGTAGACCTAGGTCATGTAAACATAGAAAAGGTTCCTAAAATTACAATGCCTTTGATTTGCTTCAGGGAGGGTAGCCCTCCACTGCCCGATGTCAATACCTCTCTAACAGATTCGGGCCATCAAGTTTTAGTTCCCTTTTACGATGGTTCACTTAAGGCAACACAAGCTCTTCAGAGTGCAGAGCAATGCTATCTTATGCAAAAGAATTTCACAGTGAAGTTGACAAATGAGCAGATTTCTCCAGGAGTTTGGTATTTGGGTCTTTTCAATGGTATTGGACCTACAAGGACGCAATCAAAAATGATTAACCGTGGATCTCAATATACCTTCAGTGCCAACATCACAGTTGAAGGATGTAAAACTGAAACCATGTGGGGCCAGTATTGCAACCAGACAATTTATCCTCTTTCTTGTTCTCTATCTGGCAGCTACAATCCTGCAGAAAATTCTTCAGAGGCTAATTTGTACAACAGTACAATGGGTTATGGTATTTCTTGCAAAAATGATTTTGAAACTTCTTGTCAAGGAGATGGGGAACCAAAGTTTTACTCTTTGGATGTGGTGGGAATATCACAGGAGTTAAACATTGTGGCAACGGATGTTTGGTTAAATGAAACATTATCAAATAACACTAAGAATGGTAGTGATATTAATTTAATGTGTTTTGCACGTCACGGTGCAATACCTTCAGAATCTCTGCATGATTATTCCAGTAATATAAACAATAATCCTTTGGTCATTAACTTTCCAAAGGTTGGCCGCTGGTATATTACTGTTTTACCTGTCAACCTCTCAAAAGTGCTTGGAGGGAGTTTAGATACTTCCATAAAAGTTTGCTACTCCATGGAATCAAAACTGCTTGAATGTCCACTGGGGAAGGCTGGAGCAAATTGTACATGGGAAACATACACCCTTCAGACGGTTCTGAGGAAAGGTTCAGGCTTCTTTGAGTCCTACTATTTGCCTGACGGTGGAAAAGTATCTTCTGACTCAGCCAATTTTCCACTTGATTCGCTTGTAACCAACACATCGATTGGCGAAAAACCAGATAATACCTGGACTTATTTTGCTCTCGACATTCCTCGTGGTGCAGCTGGAGGAAATATGCACATTCGATTAACATCAGATACAAAGATTAATTACGAAGTATATACTAGATTTGGTGGATTACCATCTCTTACCAGCTGGGACTACTATTATGCTAACAGGACAAGCAATAGTGTTGGCTCCATGTTTTTCAACTTATATAACTCTAGTGAAGACAAGGTTGATTTTCACGTGTTGTACGTCAGAGAAGGAACTTGGAGTTTTGGACTTAAGCATCTAGACACCACCAGTATTGCTTCCAAAGTTCAAACTACCATGTCTCTTTCCCTTGAAAGATGCCCTAGAAGATGCTCCTCACATGGAAAATGCGAAAATGTCTTAGATGCTAGTGGATTAACATCATACAGCTACTGCTCATGTGACCGGGACCATGGAGGCTTTGATTGTAGTATTGAAATTGTATCTCATCATGGGCACATATGGCAATCAATTTTTCTTATCGCATCAAATGCTGCAGCAGCACTTCCTGCCTTCTATTCCCTTCGACAGAAGGCGTGGTCAGAATGGGTGATATATACATCTAGTGGAATTGCAAGTGGAATTTATCATGCCTGTGATGTGGGAACATGGTGTCCTCTGGATTTTAATACTTTACAGTTCATGGACTTCTGGCTGTCTTTCATGGCCGTAGTGAGCACATTTGTGTACCTAGCTACAATGGATGAAGCTCATAAGAGAGCAGTCCTCACAGCTGTAGCAATTTTTACTGCCCTTATGGCAGTTACTAAGGCCACAAGGACGTCCAATATTGCGATTGTAATGTCAATTGGCATTTCGGCTCTTCTTCTTGGATGGCTGATAGAATTAACAACCAAGTATAGGTCATTTTCCTTTCCGGTTGGATTCTCCTTAAATATAATTGAGAGGTTCCAAGGTGTTAGAGGATGGCTCAAAGATCTTATTAAGACAGTTTTCAAAAGATTTCGCTGGGGCTTTGTACTCGCAGGTTCTACTACATTAGCCATGGCAGCAATCAGCTGGACACTGGAGAGCACTGAAACCTACTGGATTTGGCACAGCCTTTGGCATGTCACCATATATACGTCTTCCTTCTTCTTCCTTTGCTCAAAAGCAAGTACTGAGAGTACTGAAAATACTGTAGATACTAGTATTGTAGATACCGAGAGTCAGAGACCCCCAAATGGAGCCTATGAGTTGACTAGGCAGGATTCATTTCCAAGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3522

Protein Analysis

843

Amino Acids

93.79

Weight (kDa)

5.97

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3522 PF12036 587 - 792 1.5e-38 Protein of unknown function (DUF3522)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2087
Acc36I ACCTGC 1 cut(s) 2279
AccB7I CCANNNNNTGG 1 cut(s) 992
AccI GTMKAC 1 cut(s) 240
AciI CCGC 1 cut(s) 997
AclWI GGATC 1 cut(s) 559
AcoI YGGCCR 2 cut(s) 994, 1968
AcsI RAATTY 4 cut(s) 10, 442, 682, 1884
AcuI CTGAAG 7 cut(s) 121, 283, 392, 550, 672, 909, 1136
AcvI CACGTG 1 cut(s) 1516
AcyI GRCGYC 1 cut(s) 2084
AfaI GTAC 8 cut(s) 704, 712, 1132, 1523, 1991, 2283, 2422, 2431
AfiI CCNNNNNNNGG 5 cut(s) 992, 1156, 1208, 2163, 2486
AflII CTTAAG 2 cut(s) 389, 1553
AflIII ACRYGT 1 cut(s) 1515
AhlI ACTAGT 1 cut(s) 2450
AjiI CACGTC 1 cut(s) 908
AjnI CCWGG 2 cut(s) 478, 1292
AleI CACNNNNGTG 1 cut(s) 1985
AloI GAACNNNNNNTCC 2 cut(s) 1900, 1932
Alw21I GWGCWC 2 cut(s) 1982, 2339
Alw26I GTCTC 2 cut(s) 1608, 2470
AlwI GGATC 1 cut(s) 559
AlwNI CAGNNNCTG 1 cut(s) 1695
AoxI GGCC 5 cut(s) 352, 613, 994, 1968, 2073
ApeKI GCWGC 6 cut(s) 663, 1328, 1796, 1799, 1802, 2312
ApoI RAATTY 4 cut(s) 10, 442, 682, 1884
AseI ATTAAT 2 cut(s) 888, 1374
Asp700I GAANNNNTTC 1 cut(s) 267
AspA2I CCTAGG 1 cut(s) 244
AspS9I GGNCC 5 cut(s) 104, 352, 515, 613, 1711
AsuC2I CCSGG 1 cut(s) 1709
AsuHPI GGTGA 2 cut(s) 1864, 2368
AvaII GGWCC 3 cut(s) 104, 515, 1711
AvrII CCTAGG 1 cut(s) 244
BaeGI GKGCMC 1 cut(s) 1761
BauI CACGAG 1 cut(s) 1320
BbrPI CACGTG 1 cut(s) 1516
BbsI GAAGAC 2 cut(s) 1503, 2382
Bbv12I GWGCWC 2 cut(s) 1982, 2339
BbvI GCAGC 6 cut(s) 675, 1340, 1783, 1811, 1814, 2324
BccI CCATC 6 cut(s) 363, 374, 761, 1417, 2130, 2223
BceAI ACGGC 1 cut(s) 1955
BcgI CGANNNNNNTGC 2 cut(s) 213, 247
BciT130I CCWGG 2 cut(s) 480, 1294
BcnI CCSGG 1 cut(s) 1709
BcoDI GTCTC 2 cut(s) 1608, 2470
BcuI ACTAGT 1 cut(s) 2450
BfmI CTRYAG 5 cut(s) 219, 675, 1797, 2037, 2442
BfrI CTTAAG 2 cut(s) 389, 1553
BfuAI ACCTGC 1 cut(s) 2279
BglI GCCNNNNNGGC 1 cut(s) 2060
BglII AGATCT 1 cut(s) 2239
BisI GCNGC 7 cut(s) 664, 997, 1329, 1797, 1800, 1803, 2313
BlnI CCTAGG 1 cut(s) 244
BlsI GCNGC 7 cut(s) 665, 998, 1330, 1798, 1801, 1804, 2314
BmcAI AGTACT 2 cut(s) 2422, 2431
Bme1390I CCNGG 3 cut(s) 480, 1294, 1709
Bme18I GGWCC 3 cut(s) 104, 515, 1711
BmgBI CACGTC 1 cut(s) 908
BmgT120I GGNCC 5 cut(s) 104, 352, 515, 613, 1711
BmiI GGNNCC 8 cut(s) 105, 270, 614, 774, 1465, 1712, 2213, 2491
BmrFI CCNGG 3 cut(s) 480, 1294, 1709
BmrI ACTGGG 2 cut(s) 110, 1118
BmsI GCATC 5 cut(s) 1567, 1610, 1622, 1657, 1796
BmuI ACTGGG 2 cut(s) 110, 1118
BoxI GACNNNNGTC 1 cut(s) 246
BpiI GAAGAC 2 cut(s) 1503, 2382
BplI GAGNNNNNCTC 4 cut(s) 2013, 2045, 2217, 2249
BpmI CTGGAG 4 cut(s) 462, 1140, 1353, 2351
BpuEI CTTGAG 1 cut(s) 143
BpuMI CCSGG 1 cut(s) 1709
Bsa29I ATCGAT 1 cut(s) 1268
BsaAI YACGTR 1 cut(s) 1516
BsaBI GATNNNNATC 3 cut(s) 1357, 1408, 1681
BsaHI GRCGYC 1 cut(s) 2084
BsaI GGTCTC 1 cut(s) 2470
BsaJI CCNNGG 7 cut(s) 200, 244, 547, 1080, 1714, 2215, 2307
BsaWI WCCGGW 1 cut(s) 2179
Bsc4I CCNNNNNNNGG 5 cut(s) 992, 1156, 1208, 2163, 2486
Bse1I ACTGG 7 cut(s) 105, 616, 948, 1113, 1572, 2334, 2354
Bse3DI GCAATG 2 cut(s) 231, 428
Bse8I GATNNNNATC 3 cut(s) 1357, 1408, 1681
BseBI CCWGG 2 cut(s) 480, 1294
BseCI ATCGAT 1 cut(s) 1268
BseDI CCNNGG 7 cut(s) 200, 244, 547, 1080, 1714, 2215, 2307
BseGI GGATG 6 cut(s) 596, 799, 841, 2011, 2141, 2234
BseJI GATNNNNATC 3 cut(s) 1357, 1408, 1681
BseLI CCNNNNNNNGG 5 cut(s) 992, 1156, 1208, 2163, 2486
BseMI GCAATG 2 cut(s) 231, 428
BseMII CTCAG 3 cut(s) 1154, 1242, 2415
BseNI ACTGG 7 cut(s) 105, 616, 948, 1113, 1572, 2334, 2354
BseRI GAGGAG 2 cut(s) 16, 1627
BseSI GKGCMC 1 cut(s) 1761
BseXI GCAGC 6 cut(s) 675, 1340, 1783, 1811, 1814, 2324
BseYI CCCAGC 2 cut(s) 1422, 2271
BsgI GTGCAG 2 cut(s) 435, 1347
BshFI GGCC 5 cut(s) 354, 615, 996, 1970, 2075
BshVI ATCGAT 1 cut(s) 1268
BsiHKAI GWGCWC 2 cut(s) 1982, 2339
BsiSI CCGG 2 cut(s) 1708, 2180
BslFI GGGAC 2 cut(s) 1439, 1724
BslI CCNNNNNNNGG 5 cut(s) 992, 1156, 1208, 2163, 2486
BsmAI GTCTC 2 cut(s) 1608, 2470
BsmFI GGGAC 2 cut(s) 1439, 1724
BsnI GGCC 5 cut(s) 354, 615, 996, 1970, 2075
Bso31I GGTCTC 1 cut(s) 2470
Bsp1286I GDGCHC 3 cut(s) 1761, 1982, 2339
Bsp1407I TGTACA 2 cut(s) 702, 1130
Bsp143I GATC 2 cut(s) 551, 2239
Bsp19I CCATGG 4 cut(s) 200, 1080, 1714, 2307
BspACI CCGC 1 cut(s) 997
BspANI GGCC 5 cut(s) 354, 615, 996, 1970, 2075
BspCNI CTCAG 3 cut(s) 1155, 1241, 2416
BspDI ATCGAT 1 cut(s) 1268
BspLI GGNNCC 8 cut(s) 105, 270, 614, 774, 1465, 1712, 2213, 2491
BspMAI CTGCAG 2 cut(s) 679, 1801
BspMI ACCTGC 1 cut(s) 2279
BspPI GGATC 1 cut(s) 559
BspQI GCTCTTC 2 cut(s) 411, 2130
BspTI CTTAAG 2 cut(s) 389, 1553
BspTNI GGTCTC 1 cut(s) 2470
BsrDI GCAATG 2 cut(s) 231, 428
BsrGI TGTACA 2 cut(s) 702, 1130
BsrI ACTGG 7 cut(s) 105, 616, 948, 1113, 1572, 2334, 2354
BssECI CCNNGG 7 cut(s) 200, 244, 547, 1080, 1714, 2215, 2307
BssMI GATC 2 cut(s) 551, 2239
BssNI GRCGYC 1 cut(s) 2084
BssSI CACGAG 1 cut(s) 1320
BssT1I CCWWGG 6 cut(s) 200, 244, 1080, 1714, 2215, 2307
Bst2BI CACGAG 1 cut(s) 1320
Bst2UI CCWGG 2 cut(s) 480, 1294
Bst6I CTCTTC 3 cut(s) 214, 411, 2130
BstACI GRCGYC 1 cut(s) 2084
BstAFI CTTAAG 2 cut(s) 389, 1553
BstAPI GCANNNNNTGC 2 cut(s) 1793, 1811
BstAUI TGTACA 2 cut(s) 702, 1130
BstBAI YACGTR 1 cut(s) 1516
BstDEI CTNAG 6 cut(s) 870, 1163, 1228, 1663, 2070, 2424
BstDSI CCRYGG 5 cut(s) 200, 547, 1080, 1714, 2307
BstF5I GGATG 6 cut(s) 596, 799, 841, 2011, 2141, 2234
BstKTI GATC 2 cut(s) 554, 2242
BstMAI GTCTC 2 cut(s) 1608, 2470
BstMBI GATC 2 cut(s) 551, 2239
BstMWI GCNNNNNNNGC 8 cut(s) 401, 621, 1765, 1793, 1802, 1811, 2060, 2312
BstNI CCWGG 2 cut(s) 480, 1294
BstNSI RCATGY 1 cut(s) 2375
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 3 cut(s) 478, 1292, 1707
BstSFI CTRYAG 5 cut(s) 219, 675, 1797, 2037, 2442
BstSLI GKGCMC 1 cut(s) 1761
BstV1I GCAGC 6 cut(s) 675, 1340, 1783, 1811, 1814, 2324
BstV2I GAAGAC 2 cut(s) 1503, 2382
BstX2I RGATCY 2 cut(s) 551, 2239
BstXI CCANNNNNNTGG 1 cut(s) 486
BstYI RGATCY 2 cut(s) 551, 2239
Bsu15I ATCGAT 1 cut(s) 1268
BsuRI GGCC 5 cut(s) 354, 615, 996, 1970, 2075
BsuTUI ATCGAT 1 cut(s) 1268
BtgI CCRYGG 5 cut(s) 200, 547, 1080, 1714, 2307
BtrI CACGTC 1 cut(s) 908
BtsCI GGATG 6 cut(s) 596, 799, 841, 2011, 2141, 2234
BtsI GCAGTG 2 cut(s) 152, 317
BtsIMutI CAGTG 8 cut(s) 79, 152, 317, 456, 574, 1106, 2327, 2337
BveI ACCTGC 1 cut(s) 2279
CaiI CAGNNNCTG 1 cut(s) 1695
Cfr13I GGNCC 5 cut(s) 104, 352, 515, 613, 1711
ClaI ATCGAT 1 cut(s) 1268
CseI GACGC 1 cut(s) 535
Csp6I GTAC 8 cut(s) 703, 711, 1131, 1522, 1990, 2282, 2421, 2430
CspCI CAANNNNNGTGG 2 cut(s) 1558, 1593
CviQI GTAC 8 cut(s) 703, 711, 1131, 1522, 1990, 2282, 2421, 2430
DdeI CTNAG 6 cut(s) 870, 1163, 1228, 1663, 2070, 2424
DpnI GATC 2 cut(s) 553, 2241
DpnII GATC 2 cut(s) 551, 2239
EaeI YGGCCR 2 cut(s) 994, 1968
Eam1104I CTCTTC 3 cut(s) 214, 411, 2130
EarI CTCTTC 3 cut(s) 214, 411, 2130
Eco130I CCWWGG 6 cut(s) 200, 244, 1080, 1714, 2215, 2307
Eco31I GGTCTC 1 cut(s) 2470
Eco47I GGWCC 3 cut(s) 104, 515, 1711
Eco57I CTGAAG 7 cut(s) 121, 283, 392, 550, 672, 909, 1136
Eco72I CACGTG 1 cut(s) 1516
EcoO109I RGGNCCY 1 cut(s) 104
EcoRII CCWGG 2 cut(s) 478, 1292
EcoT14I CCWWGG 6 cut(s) 200, 244, 1080, 1714, 2215, 2307
ErhI CCWWGG 6 cut(s) 200, 244, 1080, 1714, 2215, 2307
FaqI GGGAC 2 cut(s) 1439, 1724
FauNDI CATATG 1 cut(s) 1763
FblI GTMKAC 1 cut(s) 240
Fnu4HI GCNGC 7 cut(s) 664, 997, 1329, 1797, 1800, 1803, 2313
FokI GGATG 6 cut(s) 603, 806, 848, 2018, 2148, 2241
Fsp4HI GCNGC 7 cut(s) 664, 997, 1329, 1797, 1800, 1803, 2313
GluI GCNGC 7 cut(s) 664, 997, 1329, 1797, 1800, 1803, 2313
GsaI CCCAGC 2 cut(s) 1426, 2275
GsuI CTGGAG 4 cut(s) 462, 1140, 1353, 2351
HaeIII GGCC 5 cut(s) 354, 615, 996, 1970, 2075
HapII CCGG 2 cut(s) 1708, 2180
HgaI GACGC 1 cut(s) 535
Hin1I GRCGYC 1 cut(s) 2084
HincII GTYRAC 3 cut(s) 459, 1024, 2502
HindII GTYRAC 3 cut(s) 459, 1024, 2502
HpaII CCGG 2 cut(s) 1708, 2180
HphI GGTGA 2 cut(s) 1864, 2368
Hpy166II GTNNAC 8 cut(s) 241, 256, 386, 459, 1024, 1106, 1990, 2502
Hpy188III TCNNGA 4 cut(s) 160, 1310, 1562, 1922
Hpy8I GTNNAC 8 cut(s) 241, 256, 386, 459, 1024, 1106, 1990, 2502
Hpy99I CGWCG 1 cut(s) 98
HpyCH4IV ACGT 6 cut(s) 237, 907, 1515, 1524, 2084, 2387
HpyF10VI GCNNNNNNNGC 8 cut(s) 401, 621, 1765, 1793, 1802, 1811, 2060, 2312
HpyF3I CTNAG 6 cut(s) 870, 1163, 1228, 1663, 2070, 2424
HpySE526I ACGT 6 cut(s) 237, 907, 1515, 1524, 2084, 2387
Hsp92I GRCGYC 1 cut(s) 2084
Kzo9I GATC 2 cut(s) 551, 2239
LguI GCTCTTC 2 cut(s) 411, 2130
LmnI GCTCC 5 cut(s) 29, 1121, 1469, 1640, 2489
Lsp1109I GCAGC 6 cut(s) 675, 1340, 1783, 1811, 1814, 2324
LweI GCATC 5 cut(s) 1567, 1610, 1622, 1657, 1796
MaeII ACGT 6 cut(s) 237, 907, 1515, 1524, 2084, 2387
MaeIII GTNAC 5 cut(s) 908, 1255, 1703, 2065, 2374
MalI GATC 2 cut(s) 553, 2241
MboI GATC 2 cut(s) 551, 2239
MfeI CAATTG 1 cut(s) 2109
MflI RGATCY 2 cut(s) 551, 2239
MhlI GDGCHC 3 cut(s) 1761, 1982, 2339
MlyI GAGTC 3 cut(s) 1196, 1220, 2479
MmeI TCCRAC 1 cut(s) 2164
MroXI GAANNNNTTC 1 cut(s) 267
MslI CAYNNNNRTG 2 cut(s) 1896, 1985
MspA1I CMGCKG 5 cut(s) 999, 1331, 1422, 2036, 2322
MspCI CTTAAG 2 cut(s) 389, 1553
MspI CCGG 2 cut(s) 1708, 2180
MspR9I CCNGG 3 cut(s) 480, 1294, 1709
MunI CAATTG 1 cut(s) 2109
MvaI CCWGG 2 cut(s) 480, 1294
MwoI GCNNNNNNNGC 8 cut(s) 401, 621, 1765, 1793, 1802, 1811, 2060, 2312
NciI CCSGG 1 cut(s) 1709
NcoI CCATGG 4 cut(s) 200, 1080, 1714, 2307
NdeI CATATG 1 cut(s) 1763
NdeII GATC 2 cut(s) 551, 2239
NlaIV GGNNCC 8 cut(s) 105, 270, 614, 774, 1465, 1712, 2213, 2491
NmuCI GTSAC 3 cut(s) 908, 1703, 2374
NspI RCATGY 1 cut(s) 2375
OliI CACNNNNGTG 1 cut(s) 1985
PciSI GCTCTTC 2 cut(s) 411, 2130
PcsI WCGNNNNNNNCGW 1 cut(s) 1521
PdmI GAANNNNTTC 1 cut(s) 267
PfeI GAWTC 8 cut(s) 16, 40, 347, 929, 1085, 1247, 2187, 2513
PflMI CCANNNNNTGG 1 cut(s) 992
PfoI TCCNGGA 1 cut(s) 478
PkrI GCNGC 7 cut(s) 665, 998, 1330, 1798, 1801, 1804, 2314
PleI GAGTC 3 cut(s) 1195, 1220, 2478
PmaCI CACGTG 1 cut(s) 1516
PmlI CACGTG 1 cut(s) 1516
PpsI GAGTC 3 cut(s) 1195, 1220, 2478
Ppu21I YACGTR 1 cut(s) 1516
PpuMI RGGWCCY 1 cut(s) 104
PshAI GACNNNNGTC 1 cut(s) 246
PshBI ATTAAT 2 cut(s) 888, 1374
Psp5II RGGWCCY 1 cut(s) 104
Psp6I CCWGG 2 cut(s) 478, 1292
PspCI CACGTG 1 cut(s) 1516
PspFI CCCAGC 2 cut(s) 1422, 2271
PspGI CCWGG 2 cut(s) 478, 1292
PspN4I GGNNCC 8 cut(s) 105, 270, 614, 774, 1465, 1712, 2213, 2491
PspPI GGNCC 5 cut(s) 104, 352, 515, 613, 1711
PspPPI RGGWCCY 1 cut(s) 104
PstI CTGCAG 2 cut(s) 679, 1801
PstNI CAGNNNCTG 1 cut(s) 1695
PsuI RGATCY 2 cut(s) 551, 2239
PvuII CAGCTG 4 cut(s) 1331, 1422, 2036, 2322
RsaI GTAC 8 cut(s) 704, 712, 1132, 1523, 1991, 2283, 2422, 2431
RsaNI GTAC 8 cut(s) 703, 711, 1131, 1522, 1990, 2282, 2421, 2430
RseI CAYNNNNRTG 2 cut(s) 1896, 1985
SapI GCTCTTC 2 cut(s) 411, 2130
SatI GCNGC 7 cut(s) 664, 997, 1329, 1797, 1800, 1803, 2313
Sau3AI GATC 2 cut(s) 551, 2239
Sau96I GGNCC 5 cut(s) 104, 352, 515, 613, 1711
ScaI AGTACT 2 cut(s) 2422, 2431
SchI GAGTC 3 cut(s) 1196, 1220, 2479
ScrFI CCNGG 3 cut(s) 480, 1294, 1709
SduI GDGCHC 3 cut(s) 1761, 1982, 2339
SfaNI GCATC 5 cut(s) 1567, 1610, 1622, 1657, 1796
SfcI CTRYAG 5 cut(s) 219, 675, 1797, 2037, 2442
SinI GGWCC 3 cut(s) 104, 515, 1711
SmiMI CAYNNNNRTG 2 cut(s) 1896, 1985
SmlI CTYRAG 3 cut(s) 158, 389, 1553
SmoI CTYRAG 3 cut(s) 158, 389, 1553
SpeI ACTAGT 1 cut(s) 2450
SsiI CCGC 1 cut(s) 997
SspI AATATT 1 cut(s) 2092
StyD4I CCNGG 3 cut(s) 478, 1292, 1707
StyI CCWWGG 6 cut(s) 200, 244, 1080, 1714, 2215, 2307
TaiI ACGT 6 cut(s) 240, 910, 1518, 1527, 2087, 2390
TaqI TCGA 6 cut(s) 14, 233, 1268, 1311, 1351, 1828
TaqII GACCGA 1 cut(s) 35
TatI WGTACW 6 cut(s) 702, 710, 1130, 2281, 2420, 2429
TauI GCSGC 1 cut(s) 999
TfiI GAWTC 8 cut(s) 16, 40, 347, 929, 1085, 1247, 2187, 2513
TscAI CASTG 8 cut(s) 86, 159, 324, 456, 574, 1113, 2334, 2344
TseFI GTSAC 3 cut(s) 908, 1703, 2374
TseI GCWGC 6 cut(s) 663, 1328, 1796, 1799, 1802, 2312
Tsp45I GTSAC 3 cut(s) 908, 1703, 2374
TspDTI ATGAA 7 cut(s) 53, 242, 864, 1933, 1954, 2022, 2505
TspGWI ACGGA 1 cut(s) 848
TspRI CASTG 8 cut(s) 86, 159, 324, 456, 574, 1113, 2334, 2344
Van91I CCANNNNNTGG 1 cut(s) 992
Vha464I CTTAAG 2 cut(s) 389, 1553
VpaK11BI GGWCC 3 cut(s) 104, 515, 1711
VspI ATTAAT 2 cut(s) 888, 1374
XapI RAATTY 4 cut(s) 10, 442, 682, 1884
XbaI TCTAGA 1 cut(s) 1561
XceI RCATGY 1 cut(s) 2375
XcmI CCANNNNNNNNNTGG 1 cut(s) 1290
XmaJI CCTAGG 1 cut(s) 244
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 1 cut(s) 267
ZraI GACGTC 1 cut(s) 2085
ZrmI AGTACT 2 cut(s) 2422, 2431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.