Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006680

Physical Location & Seq

Genomic Coordinates Forward (+)

9590766 .. 9593663

Gene Structure 2898 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ47175

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGAGTCGACGGCGGAGTCGGTGGACCAAGTGGTGGAGGAGATTATGAGAATCCACAGATCCTTGCCGCCGCGGCCCGGCATCGACGAGGTGGAGGCGGCGAAGGCGCTGATTCAAAATGTGGAGAAGGAGGACCAGGCCAGGCTGGAAGCCATTGCTAAACAGACCAAGAGCAACAACGTCTCCGAAGAGCTCTTCATGGTTTTGCAGGAGATGCAGAAGAACATGGTCTACTTCAACAGCAGAGAGCAGAAGCAGGAGGCCTTGAAGTTGCTCGATCTTGAAAATCTTCACGAATTGTTCGACGATTATATCCAGAGAGCTTCCACCTGCGTTTCTTCTTCTTCTTCTTCGGCTCCGTCGTCTTACACGAAGTCGATTCCCAAGGCTAGACCTAAGCCGTTGGATTCCGCCGCGGCGTACGTGTACCGCTCCGACAGAGAAGTCGGTAAGGCTAAAGCCATGGTCAGCCGAGACGACAGTTACGTGGTCAACAAGGCCAAGAAGAGCTTCTACGCCGACGGAATTGGGCCTGGGCCGGCGGTTTCCGCCACGCCGCAGATTGCCGATTCGTCTCTCAAGTCTGGTCTCGCTCTTGCTTCATCTGGCGCTGGAGCTGGAGCTGGAGTGTTAGGGTTAGGTCAAGAGGGTGAGAAATTGAGTTTGATAAAGCTAGCGAGTCTAATTGAGGTCTTGGCCAAGAAAGGGACTAAGGAGGTTAATCTTCGAAACAAGTTGAATGACCAAATCGAGTGGCTACCTGATTCGATAGGAAAGCTTTCGAGTTTGCTGACTCTTGATTTGTCTGAAAATCGGCTTTTGGTCCTGCCATCCACCATTGGAGGACTTTCGACCTTGACCAAATTGGATTTGCATTCCAACAGGCTCACTGAGCTACCGGACACTTTTGGGGATCTTCTTAGCCTTGTCCATCTTGACCTTAGGGCAAACAATTTGGCATCTCTGCCTGCTACATTTGGCCGATTGGTGCGTCTTGAAGAGCTGGACTTGAGCTCAAATAGGCTCTCTTTGCTTCCTGACTCAATTGGGTCGCTTGCTAGTCTCAAGAGCTTTAATGTGGAGACCAATGAGATTGATGAAATTCCTCATAGCATTGGTCATTGCACGAACCTTAGGGAGCTCCATGCTGATTATAACCGGCTTAAAGCACTTCCAGAAGCCGTAGGAAAGATTGAGACCCTGGAGATTTTGTCAGTGCGTTACAATAACATCAAGCAGTTGCCCACAACCGTGTCATCTCTACTGAGCTTGAGGGAACTGGATGTGAGTTTCAATGAGCTTGAGTCAGTGCCTGAGAACTTATGTTTTGCCACCTCACTGGTCAAGATGAACGTAGGAAACAATTTTGCTGATCTGCGGTCACTACCAAGGTCCATTGGGAACCTTGAGATGCTTGAAGAGTTGGATATCAGCAATAACCAGATACGGTTTCTCCCCGACTCTTTCAGGATGCTCACACGACTACGTGTTCTACGTGTAGAAGAAAACCCTCTTGAAGTGCCTCCTAGACATATAGCTGACAAGGGAGCGCAAGCTGTTGTCCAATACATGGCAGAGCTTGTCGAGAAAAGAGAAGTTAAAGTACAACCGACTAAGCAAAAAAAGAGTTGGGCTCAAATCTGCTTCTTCTCAAGGTCAAACAAAAGGAAGCGCGATGGTGCAGATTATGTGAAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0007154 GO:0007165 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009987 GO:0016020 GO:0023052 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8

Protein Analysis

566

Amino Acids

62.6

Weight (kDa)

6.05

Isoelectric Point (pI)

42.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	248 - 314	8.8e-10	Leucine-rich repeat region
LRR_8	PF13855	255 - 296	8.1e-06	Leucine rich repeat
LRR_8	PF13855	285 - 342	1.4e-11	Leucine rich repeat
LRR_14	PF23598	289 - 386	4e-12	Leucine-rich repeat region
LRR_8	PF13855	332 - 388	3.5e-08	Leucine rich repeat
LRR_8	PF13855	446 - 505	3.6e-06	Leucine rich repeat
LRR_14	PF23598	459 - 503	1.6e-07	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17440 AT4G35470 AT4G35470
fragaria_vesca	FvH4_1g10070 FvH4_1g10070 FvH4_1g10070
malus_domestica	MD02G1109000.v1.1 MD15G1228200.v1.1
prunus_persica	Prupe.7G186300_v2.0.a1
pyrus_communis	pycom02g08760 pycom02g08770 pycom15g20310
rosa_chinensis	RchiOBHm_Chr2g0096861
rosa_laevigata	RLG00000016674
rosa_multiflora	Rmu_co8410777.1_g000001 Rmu_ssc0000215.1_g000025
rosa_roxburghii	Rroxscaffold_2G00145260 Rroxscaffold_4G00329410 Rroxscaffold_4G00329650
rosa_rugosa	Rorug02G0061500 Rorug02G0061500
rosa_samantha	Rh2AG108900 Rh2BG111000 Rh2CG113100 Rh2DG112200
rosa_wichuraiana	Rw2G008430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1155
AarI	CACCTGC	1 cut(s)	338
AasI	GACNNNNNNGTC	2 cut(s)	16, 443
Acc36I	ACCTGC	1 cut(s)	338
AccB7I	CCANNNNNTGG	2 cut(s)	34, 1570
AccBSI	CCGCTC	1 cut(s)	432
AccI	GTMKAC	2 cut(s)	8, 231
AccII	CGCG	3 cut(s)	73, 416, 1674
AclWI	GGATC	2 cut(s)	54, 921
AcoI	YGGCCR	2 cut(s)	696, 979
AcsI	RAATTY	1 cut(s)	1101
AfaI	GTAC	3 cut(s)	422, 428, 1605
AfiI	CCNNNNNNNGG	4 cut(s)	34, 77, 705, 1570
AflIII	ACRYGT	3 cut(s)	423, 1486, 1495
AgsI	TTSAA	9 cut(s)	116, 238, 268, 284, 739, 998, 1294, 1418, 1517
AjnI	CCWGG	4 cut(s)	135, 140, 532, 1200
AjuI	GAANNNNNNNTTGG	2 cut(s)	494, 526
AleI	CACNNNNGTG	1 cut(s)	1250
Alw21I	GWGCWC	3 cut(s)	195, 1016, 1143
Alw26I	GTCTC	7 cut(s)	187, 468, 579, 593, 1067, 1076, 1190
AlwI	GGATC	2 cut(s)	54, 921
AlwNI	CAGNNNCTG	1 cut(s)	1313
AoxI	GGCC	8 cut(s)	74, 138, 261, 498, 530, 536, 696, 979
ApoI	RAATTY	1 cut(s)	1101
ArsI	GACNNNNNNTTYG	2 cut(s)	784, 816
Asp700I	GAANNNNTTC	3 cut(s)	288, 509, 778
AspLEI	GCGC	4 cut(s)	109, 611, 1552, 1674
AspS9I	GGNCC	7 cut(s)	25, 75, 133, 530, 536, 823, 1392
AsuC2I	CCSGG	1 cut(s)	78
AsuHPI	GGTGA	1 cut(s)	662
AsuII	TTCGAA	1 cut(s)	727
AsuNHI	GCTAGC	1 cut(s)	673
AvaII	GGWCC	4 cut(s)	25, 133, 823, 1392
AxyI	CCTNAGG	2 cut(s)	941, 1133
BalI	TGGCCA	1 cut(s)	698
BanII	GRGCYC	4 cut(s)	195, 1016, 1143, 1636
BarI	GAAGNNNNNNTAC	4 cut(s)	497, 529, 1587, 1619
Bbv12I	GWGCWC	3 cut(s)	195, 1016, 1143
BccI	CCATC	3 cut(s)	838, 939, 1670
BceAI	ACGGC	3 cut(s)	27, 385, 1166
BciT130I	CCWGG	4 cut(s)	137, 142, 534, 1202
BcnI	CCSGG	1 cut(s)	78
BcoDI	GTCTC	7 cut(s)	187, 468, 579, 593, 1067, 1076, 1190
BfaI	CTAG	4 cut(s)	390, 674, 1059, 1527
BfoI	RGCGCY	2 cut(s)	110, 612
BfuAI	ACCTGC	1 cut(s)	338
BglI	GCCNNNNNGGC	1 cut(s)	73
BisI	GCNGC	7 cut(s)	68, 71, 74, 99, 414, 417, 557
BlsI	GCNGC	7 cut(s)	69, 72, 75, 100, 415, 418, 558
Bme1390I	CCNGG	5 cut(s)	78, 137, 142, 534, 1202
Bme18I	GGWCC	4 cut(s)	25, 133, 823, 1392
BmgT120I	GGNCC	7 cut(s)	25, 75, 133, 530, 536, 823, 1392
BmiI	GGNNCC	2 cut(s)	357, 1403
BmrFI	CCNGG	5 cut(s)	78, 137, 142, 534, 1202
BmsI	GCATC	5 cut(s)	90, 204, 968, 1401, 1461
BmtI	GCTAGC	1 cut(s)	677
BplI	GAGNNNNNCTC	2 cut(s)	1618, 1650
BpmI	CTGGAG	4 cut(s)	633, 639, 645, 1223
Bpu10I	CCTNAGC	1 cut(s)	396
Bpu14I	TTCGAA	1 cut(s)	727
BpuEI	CTTGAG	7 cut(s)	563, 1030, 1049, 1291, 1322, 1427, 1636
BpuMI	CCSGG	1 cut(s)	78
BsaAI	YACGTR	4 cut(s)	424, 487, 1487, 1496
BsaI	GGTCTC	3 cut(s)	593, 1076, 1190
BsaJI	CCNNGG	7 cut(s)	71, 384, 414, 462, 533, 1200, 1388
BsaWI	WCCGGW	1 cut(s)	898
BsaXI	ACNNNNNCTCC	8 cut(s)	167, 197, 612, 642, 1196, 1226, 1437, 1467
Bsc4I	CCNNNNNNNGG	4 cut(s)	34, 77, 705, 1570
Bse118I	RCCGGY	2 cut(s)	538, 1158
Bse1I	ACTGG	2 cut(s)	1284, 1344
Bse21I	CCTNAGG	2 cut(s)	941, 1133
Bse3DI	GCAATG	2 cut(s)	153, 1120
BseBI	CCWGG	4 cut(s)	137, 142, 534, 1202
BseDI	CCNNGG	7 cut(s)	71, 384, 414, 462, 533, 1200, 1388
BseGI	GGATG	3 cut(s)	830, 1288, 1476
BseLI	CCNNNNNNNGG	4 cut(s)	34, 77, 705, 1570
BseMI	GCAATG	2 cut(s)	153, 1120
BseMII	CTCAG	3 cut(s)	882, 1256, 1305
BseNI	ACTGG	2 cut(s)	1284, 1344
BseRI	GAGGAG	1 cut(s)	53
BsgI	GTGCAG	1 cut(s)	1701
Bsh1236I	CGCG	3 cut(s)	73, 416, 1674
BshFI	GGCC	8 cut(s)	76, 140, 263, 500, 532, 538, 698, 981
BsiHKAI	GWGCWC	3 cut(s)	195, 1016, 1143
BsiSI	CCGG	4 cut(s)	78, 539, 899, 1159
BsiWI	CGTACG	1 cut(s)	420
BslFI	GGGAC	1 cut(s)	721
BslI	CCNNNNNNNGG	4 cut(s)	34, 77, 705, 1570
BsmAI	GTCTC	7 cut(s)	187, 468, 579, 593, 1067, 1076, 1190
BsmBI	CGTCTC	3 cut(s)	187, 468, 579
BsmFI	GGGAC	1 cut(s)	721
BsmI	GAATGC	1 cut(s)	874
BsnI	GGCC	8 cut(s)	76, 140, 263, 500, 532, 538, 698, 981
Bso31I	GGTCTC	3 cut(s)	593, 1076, 1190
Bsp119I	TTCGAA	1 cut(s)	727
Bsp1286I	GDGCHC	4 cut(s)	195, 1016, 1143, 1636
Bsp143I	GATC	4 cut(s)	59, 277, 913, 1372
Bsp19I	CCATGG	1 cut(s)	462
BspANI	GGCC	8 cut(s)	76, 140, 263, 500, 532, 538, 698, 981
BspCNI	CTCAG	3 cut(s)	883, 1257, 1306
BspFNI	CGCG	3 cut(s)	73, 416, 1674
BspLI	GGNNCC	2 cut(s)	357, 1403
BspMI	ACCTGC	1 cut(s)	338
BspOI	GCTAGC	1 cut(s)	677
BspPI	GGATC	2 cut(s)	54, 921
BspQI	GCTCTTC	4 cut(s)	183, 200, 500, 993
BspT104I	TTCGAA	1 cut(s)	727
BspTNI	GGTCTC	3 cut(s)	593, 1076, 1190
BsrBI	CCGCTC	1 cut(s)	432
BsrDI	GCAATG	2 cut(s)	153, 1120
BsrFI	RCCGGY	2 cut(s)	538, 1158
BsrI	ACTGG	2 cut(s)	1284, 1344
BssAI	RCCGGY	2 cut(s)	538, 1158
BssECI	CCNNGG	7 cut(s)	71, 384, 414, 462, 533, 1200, 1388
BssMI	GATC	4 cut(s)	59, 277, 913, 1372
BssT1I	CCWWGG	3 cut(s)	384, 462, 1388
Bst2UI	CCWGG	4 cut(s)	137, 142, 534, 1202
Bst4CI	ACNGT	3 cut(s)	482, 1252, 1449
Bst6I	CTCTTC	5 cut(s)	183, 200, 500, 993, 1413
BstAPI	GCANNNNNTGC	1 cut(s)	214
BstBAI	YACGTR	4 cut(s)	424, 487, 1487, 1496
BstBI	TTCGAA	1 cut(s)	727
BstC8I	GCNNGC	5 cut(s)	540, 675, 969, 1056, 1554
BstDEI	CTNAG	9 cut(s)	396, 711, 891, 920, 941, 1133, 1265, 1314, 1614
BstDSI	CCRYGG	3 cut(s)	71, 414, 462
BstF5I	GGATG	3 cut(s)	830, 1288, 1476
BstFNI	CGCG	3 cut(s)	73, 416, 1674
BstH2I	RGCGCY	2 cut(s)	110, 612
BstHHI	GCGC	4 cut(s)	109, 611, 1552, 1674
BstKTI	GATC	4 cut(s)	62, 280, 916, 1375
BstMAI	GTCTC	7 cut(s)	187, 468, 579, 593, 1067, 1076, 1190
BstMBI	GATC	4 cut(s)	59, 277, 913, 1372
BstMWI	GCNNNNNNNGC	6 cut(s)	73, 104, 214, 548, 892, 1030
BstNI	CCWGG	4 cut(s)	137, 142, 534, 1202
BstSCI	CCNGG	5 cut(s)	76, 135, 140, 532, 1200
BstUI	CGCG	3 cut(s)	73, 416, 1674
BstX2I	RGATCY	2 cut(s)	59, 913
BstXI	CCANNNNNNTGG	1 cut(s)	1339
BstYI	RGATCY	2 cut(s)	59, 913
Bsu36I	CCTNAGG	2 cut(s)	941, 1133
BsuRI	GGCC	8 cut(s)	76, 140, 263, 500, 532, 538, 698, 981
BtgI	CCRYGG	3 cut(s)	71, 414, 462
BtgZI	GCGATG	1 cut(s)	1689
BtsCI	GGATG	3 cut(s)	830, 1288, 1476
BtsIMutI	CAGTG	4 cut(s)	888, 1221, 1314, 1337
BveI	ACCTGC	1 cut(s)	338
Cac8I	GCNNGC	5 cut(s)	540, 675, 969, 1056, 1554
CaiI	CAGNNNCTG	1 cut(s)	1313
CfoI	GCGC	4 cut(s)	109, 611, 1552, 1674
Cfr10I	RCCGGY	2 cut(s)	538, 1158
Cfr13I	GGNCC	7 cut(s)	25, 75, 133, 530, 536, 823, 1392
Cfr42I	CCGCGG	2 cut(s)	74, 417
CseI	GACGC	1 cut(s)	980
Csp6I	GTAC	3 cut(s)	421, 427, 1604
CspCI	CAANNNNNGTGG	2 cut(s)	734, 769
CviAII	CATG	5 cut(s)	199, 226, 463, 1145, 1570
CviQI	GTAC	3 cut(s)	421, 427, 1604
DdeI	CTNAG	9 cut(s)	396, 711, 891, 920, 941, 1133, 1265, 1314, 1614
DpnI	GATC	4 cut(s)	61, 279, 915, 1374
DpnII	GATC	4 cut(s)	59, 277, 913, 1372
DrdI	GACNNNNNNGTC	2 cut(s)	16, 443
DseDI	GACNNNNNNGTC	2 cut(s)	16, 443
EaeI	YGGCCR	2 cut(s)	696, 979
Eam1104I	CTCTTC	5 cut(s)	183, 200, 500, 993, 1413
EarI	CTCTTC	5 cut(s)	183, 200, 500, 993, 1413
EciI	GGCGGA	3 cut(s)	29, 400, 538
Ecl136II	GAGCTC	3 cut(s)	193, 1014, 1141
Eco130I	CCWWGG	3 cut(s)	384, 462, 1388
Eco147I	AGGCCT	1 cut(s)	263
Eco24I	GRGCYC	4 cut(s)	195, 1016, 1143, 1636
Eco31I	GGTCTC	3 cut(s)	593, 1076, 1190
Eco32I	GATATC	1 cut(s)	1429
Eco47I	GGWCC	4 cut(s)	25, 133, 823, 1392
Eco53kI	GAGCTC	3 cut(s)	193, 1014, 1141
Eco81I	CCTNAGG	2 cut(s)	941, 1133
EcoICRI	GAGCTC	3 cut(s)	193, 1014, 1141
EcoRII	CCWGG	4 cut(s)	135, 140, 532, 1200
EcoRV	GATATC	1 cut(s)	1429
EcoT14I	CCWWGG	3 cut(s)	384, 462, 1388
EcoT38I	GRGCYC	4 cut(s)	195, 1016, 1143, 1636
ErhI	CCWWGG	3 cut(s)	384, 462, 1388
Esp3I	CGTCTC	3 cut(s)	187, 468, 579
FaeI	CATG	5 cut(s)	202, 229, 466, 1148, 1573
FalI	AAGNNNNNCTT	2 cut(s)	494, 526
FaqI	GGGAC	1 cut(s)	721
FatI	CATG	5 cut(s)	198, 225, 462, 1144, 1569
FblI	GTMKAC	2 cut(s)	8, 231
Fnu4HI	GCNGC	7 cut(s)	68, 71, 74, 99, 414, 417, 557
FokI	GGATG	3 cut(s)	817, 1295, 1483
FriOI	GRGCYC	4 cut(s)	195, 1016, 1143, 1636
Fsp4HI	GCNGC	7 cut(s)	68, 71, 74, 99, 414, 417, 557
FspBI	CTAG	4 cut(s)	390, 674, 1059, 1527
GlaI	GCGC	4 cut(s)	108, 610, 1551, 1673
GluI	GCNGC	7 cut(s)	68, 71, 74, 99, 414, 417, 557
GsuI	CTGGAG	4 cut(s)	633, 639, 645, 1223
HaeII	RGCGCY	2 cut(s)	110, 612
HaeIII	GGCC	8 cut(s)	76, 140, 263, 500, 532, 538, 698, 981
HapII	CCGG	4 cut(s)	78, 539, 899, 1159
HgaI	GACGC	1 cut(s)	980
HhaI	GCGC	4 cut(s)	109, 611, 1552, 1674
Hin1II	CATG	5 cut(s)	202, 229, 466, 1148, 1573
Hin6I	GCGC	4 cut(s)	107, 609, 1550, 1672
HinP1I	GCGC	4 cut(s)	107, 609, 1550, 1672
HincII	GTYRAC	2 cut(s)	9, 493
HindII	GTYRAC	2 cut(s)	9, 493
HindIII	AAGCTT	1 cut(s)	776
HpaII	CCGG	4 cut(s)	78, 539, 899, 1159
HphI	GGTGA	1 cut(s)	662
Hpy166II	GTNNAC	5 cut(s)	9, 25, 232, 427, 493
Hpy188I	TCNGA	3 cut(s)	187, 436, 808
Hpy8I	GTNNAC	5 cut(s)	9, 25, 232, 427, 493
Hpy99I	CGWCG	5 cut(s)	13, 89, 308, 364, 524
HpyAV	CCTTC	2 cut(s)	97, 121
HpyCH4III	ACNGT	3 cut(s)	482, 1252, 1449
HpyCH4IV	ACGT	6 cut(s)	180, 423, 486, 1353, 1486, 1495
HpyCH4V	TGCA	5 cut(s)	208, 217, 874, 1125, 1682
HpyF10VI	GCNNNNNNNGC	6 cut(s)	73, 104, 214, 548, 892, 1030
HpyF3I	CTNAG	9 cut(s)	396, 711, 891, 920, 941, 1133, 1265, 1314, 1614
HpySE526I	ACGT	6 cut(s)	180, 423, 486, 1353, 1486, 1495
Hsp92II	CATG	5 cut(s)	202, 229, 466, 1148, 1573
HspAI	GCGC	4 cut(s)	107, 609, 1550, 1672
KroI	GCCGGC	1 cut(s)	538
KroNI	GCCGGC	1 cut(s)	540
KspI	CCGCGG	2 cut(s)	74, 417
Kzo9I	GATC	4 cut(s)	59, 277, 913, 1372
LguI	GCTCTTC	4 cut(s)	183, 200, 500, 993
LmnI	GCTCC	7 cut(s)	361, 437, 614, 620, 1138, 1146, 1547
LweI	GCATC	5 cut(s)	90, 204, 968, 1401, 1461
MaeI	CTAG	4 cut(s)	390, 674, 1059, 1527
MaeII	ACGT	6 cut(s)	180, 423, 486, 1353, 1486, 1495
MaeIII	GTNAC	3 cut(s)	482, 1220, 1380
MalI	GATC	4 cut(s)	61, 279, 915, 1374
MbiI	CCGCTC	1 cut(s)	432
MboI	GATC	4 cut(s)	59, 277, 913, 1372
MfeI	CAATTG	1 cut(s)	1044
MflI	RGATCY	2 cut(s)	59, 913
MhlI	GDGCHC	4 cut(s)	195, 1016, 1143, 1636
MlsI	TGGCCA	1 cut(s)	698
MluCI	AATT	9 cut(s)	296, 525, 656, 684, 863, 952, 1044, 1101, 1363
MluNI	TGGCCA	1 cut(s)	698
MlyI	GAGTC	7 cut(s)	14, 26, 688, 787, 1034, 1313, 1454
MmeI	TCCRAC	4 cut(s)	384, 459, 903, 1404
Mox20I	TGGCCA	1 cut(s)	698
MroNI	GCCGGC	1 cut(s)	538
MroXI	GAANNNNTTC	3 cut(s)	288, 509, 778
MscI	TGGCCA	1 cut(s)	698
MseI	TTAA	4 cut(s)	720, 1074, 1164, 1599
MslI	CAYNNNNRTG	1 cut(s)	1250
Msp20I	TGGCCA	1 cut(s)	698
MspA1I	CMGCKG	2 cut(s)	73, 416
MspI	CCGG	4 cut(s)	78, 539, 899, 1159
MspR9I	CCNGG	5 cut(s)	78, 137, 142, 534, 1202
MunI	CAATTG	1 cut(s)	1044
Mva1269I	GAATGC	1 cut(s)	874
MvaI	CCWGG	4 cut(s)	137, 142, 534, 1202
MvnI	CGCG	3 cut(s)	73, 416, 1674
MwoI	GCNNNNNNNGC	6 cut(s)	73, 104, 214, 548, 892, 1030
NaeI	GCCGGC	1 cut(s)	540
NciI	CCSGG	1 cut(s)	78
NcoI	CCATGG	1 cut(s)	462
NdeII	GATC	4 cut(s)	59, 277, 913, 1372
NgoMIV	GCCGGC	1 cut(s)	538
NheI	GCTAGC	1 cut(s)	673
NlaIII	CATG	5 cut(s)	202, 229, 466, 1148, 1573
NlaIV	GGNNCC	2 cut(s)	357, 1403
NmeAIII	GCCGAG	1 cut(s)	497
NmuCI	GTSAC	1 cut(s)	1380
NspV	TTCGAA	1 cut(s)	727
OliI	CACNNNNGTG	1 cut(s)	1250
PaqCI	CACCTGC	1 cut(s)	338
PceI	AGGCCT	1 cut(s)	263
PciSI	GCTCTTC	4 cut(s)	183, 200, 500, 993
PcsI	WCGNNNNNNNCGW	5 cut(s)	300, 359, 368, 483, 1492
PctI	GAATGC	1 cut(s)	874
PdiI	GCCGGC	1 cut(s)	540
PdmI	GAANNNNTTC	3 cut(s)	288, 509, 778
PfeI	GAWTC	6 cut(s)	51, 112, 379, 407, 569, 764
Pfl23II	CGTACG	1 cut(s)	420
PflMI	CCANNNNNTGG	2 cut(s)	34, 1570
PkrI	GCNGC	7 cut(s)	69, 72, 75, 100, 415, 418, 558
PleI	GAGTC	7 cut(s)	13, 25, 687, 787, 1034, 1312, 1454
PpsI	GAGTC	7 cut(s)	13, 25, 687, 787, 1034, 1312, 1454
Ppu21I	YACGTR	4 cut(s)	424, 487, 1487, 1496
PsiI	TTATAA	1 cut(s)	1155
Psp124BI	GAGCTC	3 cut(s)	195, 1016, 1143
Psp6I	CCWGG	4 cut(s)	135, 140, 532, 1200
PspGI	CCWGG	4 cut(s)	135, 140, 532, 1200
PspLI	CGTACG	1 cut(s)	420
PspN4I	GGNNCC	2 cut(s)	357, 1403
PspPI	GGNCC	7 cut(s)	25, 75, 133, 530, 536, 823, 1392
PsrI	GAACNNNNNNTAC	2 cut(s)	215, 247
PstNI	CAGNNNCTG	1 cut(s)	1313
PsuI	RGATCY	2 cut(s)	59, 913
RsaI	GTAC	3 cut(s)	422, 428, 1605
RsaNI	GTAC	3 cut(s)	421, 427, 1604
RseI	CAYNNNNRTG	1 cut(s)	1250
SacI	GAGCTC	3 cut(s)	195, 1016, 1143
SacII	CCGCGG	2 cut(s)	74, 417
SalI	GTCGAC	1 cut(s)	7
SapI	GCTCTTC	4 cut(s)	183, 200, 500, 993
SaqAI	TTAA	4 cut(s)	720, 1074, 1164, 1599
SatI	GCNGC	7 cut(s)	68, 71, 74, 99, 414, 417, 557
Sau3AI	GATC	4 cut(s)	59, 277, 913, 1372
Sau96I	GGNCC	7 cut(s)	25, 75, 133, 530, 536, 823, 1392
SchI	GAGTC	7 cut(s)	14, 26, 688, 787, 1034, 1313, 1454
ScrFI	CCNGG	5 cut(s)	78, 137, 142, 534, 1202
SduI	GDGCHC	4 cut(s)	195, 1016, 1143, 1636
SfaNI	GCATC	5 cut(s)	90, 204, 968, 1401, 1461
Sfr303I	CCGCGG	2 cut(s)	74, 417
SfuI	TTCGAA	1 cut(s)	727
SgrBI	CCGCGG	2 cut(s)	74, 417
SinI	GGWCC	4 cut(s)	25, 133, 823, 1392
SmiMI	CAYNNNNRTG	1 cut(s)	1250
SmlI	CTYRAG	7 cut(s)	578, 1009, 1064, 1270, 1301, 1406, 1651
SmoI	CTYRAG	7 cut(s)	578, 1009, 1064, 1270, 1301, 1406, 1651
Sse9I	AATT	9 cut(s)	296, 525, 656, 684, 863, 952, 1044, 1101, 1363
SseBI	AGGCCT	1 cut(s)	263
SspMI	CTAG	4 cut(s)	390, 674, 1059, 1527
SstI	GAGCTC	3 cut(s)	195, 1016, 1143
StuI	AGGCCT	1 cut(s)	263
StyD4I	CCNGG	5 cut(s)	76, 135, 140, 532, 1200
StyI	CCWWGG	3 cut(s)	384, 462, 1388
TaaI	ACNGT	3 cut(s)	482, 1252, 1449
TaiI	ACGT	6 cut(s)	183, 426, 489, 1356, 1489, 1498
TasI	AATT	9 cut(s)	296, 525, 656, 684, 863, 952, 1044, 1101, 1363
TatI	WGTACW	1 cut(s)	1603
TauI	GCSGC	7 cut(s)	70, 73, 76, 101, 416, 419, 559
TfiI	GAWTC	6 cut(s)	51, 112, 379, 407, 569, 764
Tru1I	TTAA	4 cut(s)	720, 1074, 1164, 1599
Tru9I	TTAA	4 cut(s)	720, 1074, 1164, 1599
TscAI	CASTG	4 cut(s)	895, 1221, 1314, 1344
TseFI	GTSAC	1 cut(s)	1380
Tsp45I	GTSAC	1 cut(s)	1380
TspDTI	ATGAA	4 cut(s)	187, 591, 1113, 1364
TspGWI	ACGGA	2 cut(s)	348, 537
TspRI	CASTG	4 cut(s)	895, 1221, 1314, 1344
Van91I	CCANNNNNTGG	2 cut(s)	34, 1570
VpaK11BI	GGWCC	4 cut(s)	25, 133, 823, 1392
XapI	RAATTY	1 cut(s)	1101
XmiI	GTMKAC	2 cut(s)	8, 231
XmnI	GAANNNNTTC	3 cut(s)	288, 509, 778
XspI	CTAG	4 cut(s)	390, 674, 1059, 1527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.