Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0006680

Physical Location & Seq

Genomic Coordinates Forward (+)

62705733 .. 62712135

Gene Structure 6403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00329410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGCAGCATCGCCGTTAGAAGGACTAGTAGAAGCAGCATTTCTTATGCTATTTGAAGTCGTTGTAGAAGTGAGGGATAGGAGTATGATGTTCAGACCCTTCCTCAGACATCTAAAATCTACTCTGGACTTCTTGAAGCCATTCATTGAAGAGATAGCAGAACATAACAAGGTACTTGATCGCCCGAAAGAGGAACTAGAAAGTCTTAGAATACACATGATGAAGGGTGTATTGCTTGTTCGCGAGTGCTCGAATGTTCGTCTTTGGACCTGCAGCAACAAAAAGTATAAATACACCAACCAACTTTTCGAATTGGATGAATCTCTTCAGTGGCAGTTAAGTATTTTTACGGAGCAGGTAGCAAGGGATGTGAGGGAGACCTCGAATTTGATAACAAATATACAAGAGGTGCTCAAGCAAATCGAAGGAAGTGGTATTCTACAAAATCAAAGTGAATTTAAAGGTTCCTCTGACTTGACTGAATCTCCAACCCCTACAGTTGAATTGGACGTGCTGAACCTGCAGGGAACAAGGGGTGTGATGAAGGAGACATTATTTTCAGCGGGTGTCAAAGAAATTGAAGGGAGTGATGAAGTACCTAGATTAGCTGTACCTCAAATGCCTACAGTTAGATTTGAAGTACAGTACCCGGAGGGAAGAAATAAGATGTCTCCTTCATCAGCAAGAGATACAAAGGAACATGAAATAACAGAAGATGCATCGCCTACACTTGAATCAGATGTACAGAATGTACAGGAAACAAGGGATGAGATGAAAACATCGGATTCAGCAATAGATATAGGGGAGAGGTTGAAGGGAATTGAAGGGAGTGAATTGGCAGAAGATCTATATGAAGTAAAAGGTCAAGAGGGTGAGAAATTGAGTTTGACAGAGATAGCGAGTCTAAATGAATTCATGGCCCTGAAAAGGAGGGAGGATGTTAATCTTCTGAACAAGATTATAGAGCAAATTGAAGTCTTGGCCCAGAAAGGGACTAGGGATGTTAATCTTCAAAACAAGATCACAGAGCAAATTGAATGTCTTCCTTACTTGATAGGAAAGCTTTCAAGTTTTCTCACCGTTGATTTATCAGAAAACGGGATTTTGGTCCTGCCATTCAACATTGGAGGTCTTTCCTCCTTGACCAGATTGGATTTGCATTCAAACAGAATCACTGAACTACCTGACACTATTGGAGATCTTCTTAGCCTTGTCTATCTTGACCTCAGCCGTAACATATTGACATGTCTGCCGTCTACATTTGGCCGATTGGTACACCTTGAAGAGCTCAATTTAAGCTCAAACGAGCTCTTTTCTCTTCCTGATTCAATTGGATCATTTGTCAATCTCAAGAAACTGCATGTAGACACCAATAATATTGTTGAAATTCCTCATAGCATTGGTCACTGTTCGTCCCTAAGAGAACTCCATGCAGATTTTAACCGGCTTAAAGCACTTCCTGAAGCCATAGGAAAGATTGAGGGCCTGGAGATTTTGTCAGTGCGTTACAATAACATCAAAATGTTGCCGACAACTATGTCATCTCTACTTGGATTGAAGGAACTTGATGTAAGTTTCAATGAGCTTGAGTCAGTGCCTGAGAGCTTATGTTTCGCCACCTCCCTGGTCAAGATGAACATAGGGAACAATTTCGCTGATCTGCGATCCCTGCCAAGATCTATAGGGAACCTCGAAATGCTTGAAGAGTTGGATATTAGCAATAACCAGATACGGTGTCTCCCCAACTCTTTCAGAATGCTCACACGATTACGTGTACTTCGAATAGAAGATACCCCTCTTGAACTCCCTCCTAGACATGTAGCTGAAAAGGGAGCACAAGCTGTTGTCCAATACATGGCAGAGCTTGTCGAGAAAGTTGATCCACAAACAACTAAGCAGAAAAAAGGTTGGGCTCAGATATTCTTCTCAAGGTCAAGCAAAAGGAAGAGCAATCCTTACGTCAAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

656

Amino Acids

74.11

Weight (kDa)

5.15

Isoelectric Point (pI)

55.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	10 - 126	1.9e-24	Arabidopsis broad-spectrum mildew resistance protein RPW8
LRR_14	PF23598	344 - 407	1.6e-06	Leucine-rich repeat region
LRR_8	PF13855	361 - 412	2.1e-06	Leucine rich repeat
LRR_8	PF13855	380 - 437	5.3e-11	Leucine rich repeat
LRR_14	PF23598	397 - 477	3.5e-11	Leucine-rich repeat region
LRR_8	PF13855	426 - 483	2.7e-07	Leucine rich repeat
LRR_14	PF23598	554 - 597	1.1e-07	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006680)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17440 AT4G35470 AT4G35470
fragaria_vesca	FvH4_1g10070 FvH4_1g10070 FvH4_1g10070
malus_domestica	MD02G1109000.v1.1 MD15G1228200.v1.1
prunus_persica	Prupe.7G186300_v2.0.a1
pyrus_communis	pycom02g08760 pycom02g08770 pycom15g20310
rosa_chinensis	RchiOBHm_Chr2g0096861
rosa_laevigata	RLG00000016674
rosa_multiflora	Rmu_co8410777.1_g000001 Rmu_ssc0000215.1_g000025
rosa_roxburghii	Rroxscaffold_2G00145260 Rroxscaffold_4G00329410 Rroxscaffold_4G00329650
rosa_rugosa	Rorug02G0061500 Rorug02G0061500
rosa_samantha	Rh2AG108900 Rh2BG111000 Rh2CG113100 Rh2DG112200
rosa_wichuraiana	Rw2G008430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1537
Acc36I	ACCTGC	3 cut(s)	278, 346, 528
AccB7I	CCANNNNNTGG	1 cut(s)	1855
AccI	GTMKAC	2 cut(s)	1256, 1365
AccII	CGCG	1 cut(s)	243
AciI	CCGC	1 cut(s)	563
AclWI	GGATC	3 cut(s)	1342, 1659, 1874
AcoI	YGGCCR	1 cut(s)	1264
AcsI	RAATTY	4 cut(s)	385, 455, 911, 1386
AcuI	CTGAAG	2 cut(s)	311, 1482
AfaI	GTAC	9 cut(s)	174, 597, 612, 642, 647, 744, 753, 1275, 1776
AfiI	CCNNNNNNNGG	5 cut(s)	20, 190, 927, 990, 1855
AflIII	ACRYGT	3 cut(s)	1244, 1771, 1816
AhlI	ACTAGT	1 cut(s)	25
AjiI	CACGTC	1 cut(s)	511
AjnI	CCWGG	2 cut(s)	1485, 1623
AjuI	GAANNNNNNNTTGG	2 cut(s)	290, 322
Alw21I	GWGCWC	5 cut(s)	251, 414, 1290, 1311, 1837
Alw26I	GTCTC	4 cut(s)	371, 542, 675, 1742
AlwI	GGATC	3 cut(s)	1342, 1659, 1874
AlwNI	CAGNNNCTG	1 cut(s)	1598
AoxI	GGCC	4 cut(s)	918, 981, 1264, 1483
ApeKI	GCWGC	3 cut(s)	5, 35, 273
ApoI	RAATTY	4 cut(s)	385, 455, 911, 1386
ArsI	GACNNNNNNTTYG	4 cut(s)	370, 402, 1024, 1056
Asp700I	GAANNNNTTC	5 cut(s)	140, 324, 1041, 1063, 1649
AspS9I	GGNCC	5 cut(s)	267, 919, 982, 1108, 1483
AsuC2I	CCSGG	1 cut(s)	650
AsuHPI	GGTGA	2 cut(s)	884, 1069
AsuII	TTCGAA	2 cut(s)	309, 1780
AvaII	GGWCC	2 cut(s)	267, 1108
BanII	GRGCYC	3 cut(s)	1290, 1311, 1915
BbsI	GAAGAC	1 cut(s)	1034
Bbv12I	GWGCWC	5 cut(s)	251, 414, 1290, 1311, 1837
BbvCI	CCTCAGC	1 cut(s)	1226
BbvI	GCAGC	3 cut(s)	17, 47, 285
BceAI	ACGGC	2 cut(s)	1215, 1237
BciT130I	CCWGG	2 cut(s)	1487, 1625
BcnI	CCSGG	1 cut(s)	650
BcoDI	GTCTC	4 cut(s)	371, 542, 675, 1742
BcuI	ACTAGT	1 cut(s)	25
BfaI	CTAG	5 cut(s)	26, 197, 600, 996, 1812
BfmI	CTRYAG	5 cut(s)	271, 495, 521, 624, 1680
BfuAI	ACCTGC	3 cut(s)	278, 346, 528
BglII	AGATCT	3 cut(s)	844, 1198, 1676
BisI	GCNGC	3 cut(s)	6, 36, 274
BlsI	GCNGC	3 cut(s)	7, 37, 275
Bme1390I	CCNGG	3 cut(s)	650, 1487, 1625
Bme18I	GGWCC	2 cut(s)	267, 1108
BmgBI	CACGTC	1 cut(s)	511
BmgT120I	GGNCC	5 cut(s)	267, 919, 982, 1108, 1483
BmiI	GGNNCC	2 cut(s)	466, 1688
BmrFI	CCNGG	3 cut(s)	650, 1487, 1625
BmsI	GCATC	3 cut(s)	17, 706, 728
BpiI	GAAGAC	1 cut(s)	1034
BpmI	CTGGAG	1 cut(s)	1508
Bpu10I	CCTNAGC	1 cut(s)	1226
Bpu14I	TTCGAA	2 cut(s)	309, 1780
BpuEI	CTTGAG	4 cut(s)	398, 1334, 1607, 1912
BpuMI	CCSGG	1 cut(s)	650
BsaAI	YACGTR	1 cut(s)	1772
BsaBI	GATNNNNATC	2 cut(s)	942, 1005
BsaI	GGTCTC	1 cut(s)	371
BsaJI	CCNNGG	1 cut(s)	1623
BsaXI	ACNNNNNCTCC	6 cut(s)	469, 499, 1481, 1511, 1722, 1752
Bsc4I	CCNNNNNNNGG	5 cut(s)	20, 190, 927, 990, 1855
Bse118I	RCCGGY	1 cut(s)	1443
Bse8I	GATNNNNATC	2 cut(s)	942, 1005
BseBI	CCWGG	2 cut(s)	1487, 1625
BseDI	CCNNGG	1 cut(s)	1623
BseGI	GGATG	5 cut(s)	322, 373, 772, 943, 1006
BseJI	GATNNNNATC	2 cut(s)	942, 1005
BseLI	CCNNNNNNNGG	5 cut(s)	20, 190, 927, 990, 1855
BseMII	CTCAG	4 cut(s)	118, 1240, 1590, 1928
BseXI	GCAGC	3 cut(s)	17, 47, 285
Bsh1236I	CGCG	1 cut(s)	243
BshFI	GGCC	4 cut(s)	920, 983, 1266, 1485
BsiHKAI	GWGCWC	5 cut(s)	251, 414, 1290, 1311, 1837
BsiSI	CCGG	2 cut(s)	650, 1444
BslFI	GGGAC	2 cut(s)	1006, 1399
BslI	CCNNNNNNNGG	5 cut(s)	20, 190, 927, 990, 1855
BsmAI	GTCTC	4 cut(s)	371, 542, 675, 1742
BsmFI	GGGAC	2 cut(s)	1006, 1399
BsmI	GAATGC	2 cut(s)	1159, 1761
BsnI	GGCC	4 cut(s)	920, 983, 1266, 1485
Bso31I	GGTCTC	1 cut(s)	371
Bsp119I	TTCGAA	2 cut(s)	309, 1780
Bsp1286I	GDGCHC	6 cut(s)	251, 414, 1290, 1311, 1837, 1915
Bsp1407I	TGTACA	2 cut(s)	742, 751
Bsp143I	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
Bsp68I	TCGCGA	1 cut(s)	243
BspACI	CCGC	1 cut(s)	563
BspANI	GGCC	4 cut(s)	920, 983, 1266, 1485
BspCNI	CTCAG	4 cut(s)	117, 1239, 1591, 1927
BspFNI	CGCG	1 cut(s)	243
BspLI	GGNNCC	2 cut(s)	466, 1688
BspMAI	CTGCAG	2 cut(s)	275, 525
BspMI	ACCTGC	3 cut(s)	278, 346, 528
BspPI	GGATC	3 cut(s)	1342, 1659, 1874
BspQI	GCTCTTC	2 cut(s)	1278, 1940
BspT104I	TTCGAA	2 cut(s)	309, 1780
BspTNI	GGTCTC	1 cut(s)	371
BsrFI	RCCGGY	1 cut(s)	1443
BsrGI	TGTACA	2 cut(s)	742, 751
BssAI	RCCGGY	1 cut(s)	1443
BssECI	CCNNGG	1 cut(s)	1623
BssMI	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
Bst2UI	CCWGG	2 cut(s)	1487, 1625
Bst4CI	ACNGT	6 cut(s)	499, 628, 645, 1081, 1409, 1734
Bst6I	CTCTTC	6 cut(s)	144, 330, 1278, 1323, 1698, 1940
BstAUI	TGTACA	2 cut(s)	742, 751
BstBAI	YACGTR	1 cut(s)	1772
BstBI	TTCGAA	2 cut(s)	309, 1780
BstDEI	CTNAG	8 cut(s)	104, 206, 1205, 1226, 1418, 1599, 1893, 1914
BstF5I	GGATG	5 cut(s)	322, 373, 772, 943, 1006
BstFNI	CGCG	1 cut(s)	243
BstKTI	GATC	9 cut(s)	181, 847, 1023, 1201, 1337, 1660, 1667, 1679, 1882
BstMAI	GTCTC	4 cut(s)	371, 542, 675, 1742
BstMBI	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
BstMWI	GCNNNNNNNGC	2 cut(s)	520, 1669
BstNI	CCWGG	2 cut(s)	1487, 1625
BstNSI	RCATGY	3 cut(s)	1248, 1364, 1820
BstSCI	CCNGG	3 cut(s)	648, 1485, 1623
BstSFI	CTRYAG	5 cut(s)	271, 495, 521, 624, 1680
BstUI	CGCG	1 cut(s)	243
BstV1I	GCAGC	3 cut(s)	17, 47, 285
BstV2I	GAAGAC	1 cut(s)	1034
BstX2I	RGATCY	3 cut(s)	844, 1198, 1676
BstXI	CCANNNNNNTGG	1 cut(s)	1624
BstYI	RGATCY	3 cut(s)	844, 1198, 1676
BsuRI	GGCC	4 cut(s)	920, 983, 1266, 1485
BtgZI	GCGATG	1 cut(s)	705
BtrI	CACGTC	1 cut(s)	511
BtsCI	GGATG	5 cut(s)	322, 373, 772, 943, 1006
BtsIMutI	CAGTG	5 cut(s)	335, 1173, 1405, 1506, 1599
BtuMI	TCGCGA	1 cut(s)	243
BveI	ACCTGC	3 cut(s)	278, 346, 528
CaiI	CAGNNNCTG	1 cut(s)	1598
Cfr10I	RCCGGY	1 cut(s)	1443
Cfr13I	GGNCC	5 cut(s)	267, 919, 982, 1108, 1483
Csp6I	GTAC	9 cut(s)	173, 596, 611, 641, 646, 743, 752, 1274, 1775
CviAII	CATG	8 cut(s)	217, 701, 916, 1245, 1361, 1430, 1817, 1855
CviQI	GTAC	9 cut(s)	173, 596, 611, 641, 646, 743, 752, 1274, 1775
DdeI	CTNAG	8 cut(s)	104, 206, 1205, 1226, 1418, 1599, 1893, 1914
DpnI	GATC	9 cut(s)	180, 846, 1022, 1200, 1336, 1659, 1666, 1678, 1881
DpnII	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
DraI	TTTAAA	1 cut(s)	460
DrdI	GACNNNNNNGTC	1 cut(s)	1537
DseDI	GACNNNNNNGTC	1 cut(s)	1537
EaeI	YGGCCR	1 cut(s)	1264
Eam1104I	CTCTTC	6 cut(s)	144, 330, 1278, 1323, 1698, 1940
EarI	CTCTTC	6 cut(s)	144, 330, 1278, 1323, 1698, 1940
Ecl136II	GAGCTC	2 cut(s)	1288, 1309
Eco24I	GRGCYC	3 cut(s)	1290, 1311, 1915
Eco31I	GGTCTC	1 cut(s)	371
Eco47I	GGWCC	2 cut(s)	267, 1108
Eco53kI	GAGCTC	2 cut(s)	1288, 1309
Eco57I	CTGAAG	2 cut(s)	311, 1482
EcoICRI	GAGCTC	2 cut(s)	1288, 1309
EcoO109I	RGGNCCY	1 cut(s)	1483
EcoRI	GAATTC	1 cut(s)	911
EcoRII	CCWGG	2 cut(s)	1485, 1623
EcoT22I	ATGCAT	1 cut(s)	721
EcoT38I	GRGCYC	3 cut(s)	1290, 1311, 1915
FaeI	CATG	8 cut(s)	220, 704, 919, 1248, 1364, 1433, 1820, 1858
FaqI	GGGAC	2 cut(s)	1006, 1399
FatI	CATG	8 cut(s)	216, 700, 915, 1244, 1360, 1429, 1816, 1854
FauI	CCCGC	1 cut(s)	556
FblI	GTMKAC	2 cut(s)	1256, 1365
Fnu4HI	GCNGC	3 cut(s)	6, 36, 274
FokI	GGATG	5 cut(s)	329, 380, 779, 950, 1013
FriOI	GRGCYC	3 cut(s)	1290, 1311, 1915
Fsp4HI	GCNGC	3 cut(s)	6, 36, 274
FspBI	CTAG	5 cut(s)	26, 197, 600, 996, 1812
GluI	GCNGC	3 cut(s)	6, 36, 274
GsuI	CTGGAG	1 cut(s)	1508
HaeIII	GGCC	4 cut(s)	920, 983, 1266, 1485
HapII	CCGG	2 cut(s)	650, 1444
Hin1II	CATG	8 cut(s)	220, 704, 919, 1248, 1364, 1433, 1820, 1858
HindIII	AAGCTT	1 cut(s)	1061
HinfI	GANTC	8 cut(s)	320, 482, 734, 785, 901, 1170, 1325, 1589
HpaII	CCGG	2 cut(s)	650, 1444
HphI	GGTGA	2 cut(s)	884, 1069
Hpy166II	GTNNAC	4 cut(s)	1257, 1276, 1366, 1775
Hpy188I	TCNGA	9 cut(s)	95, 107, 472, 739, 784, 951, 1093, 1754, 1917
Hpy8I	GTNNAC	4 cut(s)	1257, 1276, 1366, 1775
HpyCH4III	ACNGT	6 cut(s)	499, 628, 645, 1081, 1409, 1734
HpyCH4IV	ACGT	3 cut(s)	510, 1771, 1959
HpyCH4V	TGCA	6 cut(s)	273, 523, 719, 1159, 1360, 1433
HpyF10VI	GCNNNNNNNGC	2 cut(s)	520, 1669
HpyF3I	CTNAG	8 cut(s)	104, 206, 1205, 1226, 1418, 1599, 1893, 1914
HpySE526I	ACGT	3 cut(s)	510, 1771, 1959
Hsp92II	CATG	8 cut(s)	220, 704, 919, 1248, 1364, 1433, 1820, 1858
Kzo9I	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
LguI	GCTCTTC	2 cut(s)	1278, 1940
LmnI	GCTCC	2 cut(s)	352, 1832
Lsp1109I	GCAGC	3 cut(s)	17, 47, 285
LweI	GCATC	3 cut(s)	17, 706, 728
MaeI	CTAG	5 cut(s)	26, 197, 600, 996, 1812
MaeII	ACGT	3 cut(s)	510, 1771, 1959
MaeIII	GTNAC	3 cut(s)	1232, 1403, 1505
MalI	GATC	9 cut(s)	180, 846, 1022, 1200, 1336, 1659, 1666, 1678, 1881
MboI	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
MfeI	CAATTG	1 cut(s)	1329
MflI	RGATCY	3 cut(s)	844, 1198, 1676
MhlI	GDGCHC	6 cut(s)	251, 414, 1290, 1311, 1837, 1915
MlyI	GAGTC	2 cut(s)	910, 1598
MmeI	TCCRAC	2 cut(s)	512, 1689
Mph1103I	ATGCAT	1 cut(s)	721
MroXI	GAANNNNTTC	5 cut(s)	140, 324, 1041, 1063, 1649
MseI	TTAA	7 cut(s)	338, 459, 942, 1005, 1295, 1440, 1449
MslI	CAYNNNNRTG	1 cut(s)	1520
MspA1I	CMGCKG	1 cut(s)	563
MspI	CCGG	2 cut(s)	650, 1444
MspR9I	CCNGG	3 cut(s)	650, 1487, 1625
MunI	CAATTG	1 cut(s)	1329
Mva1269I	GAATGC	2 cut(s)	1159, 1761
MvaI	CCWGG	2 cut(s)	1487, 1625
MvnI	CGCG	1 cut(s)	243
MwoI	GCNNNNNNNGC	2 cut(s)	520, 1669
NciI	CCSGG	1 cut(s)	650
NdeII	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
NlaIII	CATG	8 cut(s)	220, 704, 919, 1248, 1364, 1433, 1820, 1858
NlaIV	GGNNCC	2 cut(s)	466, 1688
NmuCI	GTSAC	1 cut(s)	1403
NruI	TCGCGA	1 cut(s)	243
NsiI	ATGCAT	1 cut(s)	721
NspI	RCATGY	3 cut(s)	1248, 1364, 1820
NspV	TTCGAA	2 cut(s)	309, 1780
PciI	ACATGT	2 cut(s)	1244, 1816
PciSI	GCTCTTC	2 cut(s)	1278, 1940
PcsI	WCGNNNNNNNCGW	1 cut(s)	1777
PctI	GAATGC	2 cut(s)	1159, 1761
PdmI	GAANNNNTTC	5 cut(s)	140, 324, 1041, 1063, 1649
PfeI	GAWTC	6 cut(s)	320, 482, 734, 785, 1170, 1325
PflMI	CCANNNNNTGG	1 cut(s)	1855
PkrI	GCNGC	3 cut(s)	7, 37, 275
PleI	GAGTC	2 cut(s)	909, 1597
PpsI	GAGTC	2 cut(s)	909, 1597
Ppu21I	YACGTR	1 cut(s)	1772
PscI	ACATGT	2 cut(s)	1244, 1816
Psp124BI	GAGCTC	2 cut(s)	1290, 1311
Psp6I	CCWGG	2 cut(s)	1485, 1623
PspGI	CCWGG	2 cut(s)	1485, 1623
PspN4I	GGNNCC	2 cut(s)	466, 1688
PspPI	GGNCC	5 cut(s)	267, 919, 982, 1108, 1483
PsrI	GAACNNNNNNTAC	2 cut(s)	222, 254
PstI	CTGCAG	2 cut(s)	275, 525
PstNI	CAGNNNCTG	1 cut(s)	1598
PsuI	RGATCY	3 cut(s)	844, 1198, 1676
RruI	TCGCGA	1 cut(s)	243
RsaI	GTAC	9 cut(s)	174, 597, 612, 642, 647, 744, 753, 1275, 1776
RsaNI	GTAC	9 cut(s)	173, 596, 611, 641, 646, 743, 752, 1274, 1775
RseI	CAYNNNNRTG	1 cut(s)	1520
SacI	GAGCTC	2 cut(s)	1290, 1311
SapI	GCTCTTC	2 cut(s)	1278, 1940
SaqAI	TTAA	7 cut(s)	338, 459, 942, 1005, 1295, 1440, 1449
SatI	GCNGC	3 cut(s)	6, 36, 274
Sau3AI	GATC	9 cut(s)	178, 844, 1020, 1198, 1334, 1657, 1664, 1676, 1879
Sau96I	GGNCC	5 cut(s)	267, 919, 982, 1108, 1483
SbfI	CCTGCAGG	1 cut(s)	525
SchI	GAGTC	2 cut(s)	910, 1598
ScrFI	CCNGG	3 cut(s)	650, 1487, 1625
SdaI	CCTGCAGG	1 cut(s)	525
SduI	GDGCHC	6 cut(s)	251, 414, 1290, 1311, 1837, 1915
SfaNI	GCATC	3 cut(s)	17, 706, 728
SfcI	CTRYAG	5 cut(s)	271, 495, 521, 624, 1680
SfuI	TTCGAA	2 cut(s)	309, 1780
SinI	GGWCC	2 cut(s)	267, 1108
SmiMI	CAYNNNNRTG	1 cut(s)	1520
SmlI	CTYRAG	4 cut(s)	413, 1349, 1586, 1927
SmoI	CTYRAG	4 cut(s)	413, 1349, 1586, 1927
SpeI	ACTAGT	1 cut(s)	25
Sse8387I	CCTGCAGG	1 cut(s)	525
SsiI	CCGC	1 cut(s)	563
SspI	AATATT	1 cut(s)	1378
SspMI	CTAG	5 cut(s)	26, 197, 600, 996, 1812
SstI	GAGCTC	2 cut(s)	1290, 1311
StyD4I	CCNGG	3 cut(s)	648, 1485, 1623
TaaI	ACNGT	6 cut(s)	499, 628, 645, 1081, 1409, 1734
TaiI	ACGT	3 cut(s)	513, 1774, 1962
TaqI	TCGA	7 cut(s)	251, 309, 383, 423, 1692, 1780, 1869
TatI	WGTACW	4 cut(s)	640, 742, 751, 1774
TfiI	GAWTC	6 cut(s)	320, 482, 734, 785, 1170, 1325
Tru1I	TTAA	7 cut(s)	338, 459, 942, 1005, 1295, 1440, 1449
Tru9I	TTAA	7 cut(s)	338, 459, 942, 1005, 1295, 1440, 1449
TscAI	CASTG	5 cut(s)	335, 1180, 1412, 1506, 1599
TseFI	GTSAC	1 cut(s)	1403
TseI	GCWGC	3 cut(s)	5, 35, 273
Tsp45I	GTSAC	1 cut(s)	1403
TspGWI	ACGGA	1 cut(s)	365
TspRI	CASTG	5 cut(s)	335, 1180, 1412, 1506, 1599
Van91I	CCANNNNNTGG	1 cut(s)	1855
VpaK11BI	GGWCC	2 cut(s)	267, 1108
XapI	RAATTY	4 cut(s)	385, 455, 911, 1386
XceI	RCATGY	3 cut(s)	1248, 1364, 1820
XmiI	GTMKAC	2 cut(s)	1256, 1365
XmnI	GAANNNNTTC	5 cut(s)	140, 324, 1041, 1063, 1649
XspI	CTAG	5 cut(s)	26, 197, 600, 996, 1812
Zsp2I	ATGCAT	1 cut(s)	721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.