E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G65430 |
| fragaria_vesca | FvH4_6g00130 FvH4_6g00130 |
| malus_domestica | MD04G1248300.v1.1 MD12G1262400.v1.1 |
| prunus_persica | Prupe.6G364600_v2.0.a1 |
| pyrus_communis | pycom04g21900 pycom12g24160 |
| rosa_chinensis | RchiOBHm_Chr2g0127711 RchiOBHm_Chr3g0447471 RchiOBHm_Chr6g0267381 |
| rosa_laevigata | RLG00000025995 |
| rosa_multiflora | Rmu_sc0006572.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00344110 Rroxscaffold_6G00425690 |
| rosa_rugosa | Rorug02G0602100 |
| rosa_samantha | Rh2BG278300 Rh3AG002300 Rh3BG001800 Rh3CG002100 Rh3DG002200 |
| rosa_wichuraiana | Rw3G000120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 48 |
| AcuI | CTGAAG | 1 cut(s) | 33 |
| AfaI | GTAC | 1 cut(s) | 10 |
| AgsI | TTSAA | 1 cut(s) | 64 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 83, 115 |
| AluBI | AGCT | 1 cut(s) | 20 |
| AluI | AGCT | 1 cut(s) | 20 |
| AoxI | GGCC | 1 cut(s) | 48 |
| BalI | TGGCCA | 1 cut(s) | 50 |
| BshFI | GGCC | 1 cut(s) | 50 |
| BsnI | GGCC | 1 cut(s) | 50 |
| BspANI | GGCC | 1 cut(s) | 50 |
| Bst4CI | ACNGT | 2 cut(s) | 46, 71 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 126 |
| BsuRI | GGCC | 1 cut(s) | 50 |
| BtgZI | GCGATG | 1 cut(s) | 8 |
| BtsIMutI | CAGTG | 2 cut(s) | 51, 76 |
| Csp6I | GTAC | 1 cut(s) | 9 |
| CviJI | RGCY | 4 cut(s) | 20, 50, 104, 115 |
| CviKI_1 | RGCY | 4 cut(s) | 20, 50, 104, 115 |
| CviQI | GTAC | 1 cut(s) | 9 |
| EaeI | YGGCCR | 1 cut(s) | 48 |
| Eco57I | CTGAAG | 1 cut(s) | 33 |
| FaiI | YATR | 1 cut(s) | 89 |
| HaeIII | GGCC | 1 cut(s) | 50 |
| Hpy166II | GTNNAC | 1 cut(s) | 9 |
| Hpy8I | GTNNAC | 1 cut(s) | 9 |
| HpyCH4III | ACNGT | 2 cut(s) | 46, 71 |
| HpyCH4V | TGCA | 1 cut(s) | 129 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 126 |
| LpnPI | CCDG | 1 cut(s) | 130 |
| MboII | GAAGA | 2 cut(s) | 26, 76 |
| MlsI | TGGCCA | 1 cut(s) | 50 |
| MluCI | AATT | 2 cut(s) | 91, 106 |
| MluNI | TGGCCA | 1 cut(s) | 50 |
| Mox20I | TGGCCA | 1 cut(s) | 50 |
| MscI | TGGCCA | 1 cut(s) | 50 |
| Msp20I | TGGCCA | 1 cut(s) | 50 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 126 |
| RsaI | GTAC | 1 cut(s) | 10 |
| RsaNI | GTAC | 1 cut(s) | 9 |
| SetI | ASST | 1 cut(s) | 22 |
| SgeI | CNNG | 3 cut(s) | 41, 124, 129 |
| Sse9I | AATT | 2 cut(s) | 91, 106 |
| TaaI | ACNGT | 2 cut(s) | 46, 71 |
| TasI | AATT | 2 cut(s) | 91, 106 |
| TatI | WGTACW | 1 cut(s) | 8 |
| TscAI | CASTG | 2 cut(s) | 51, 76 |
| TspDTI | ATGAA | 2 cut(s) | 17, 104 |
| TspRI | CASTG | 2 cut(s) | 51, 76 |