E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G65430 |
| fragaria_vesca | FvH4_6g00130 FvH4_6g00130 |
| malus_domestica | MD04G1248300.v1.1 MD12G1262400.v1.1 |
| prunus_persica | Prupe.6G364600_v2.0.a1 |
| pyrus_communis | pycom04g21900 pycom12g24160 |
| rosa_chinensis | RchiOBHm_Chr2g0127711 RchiOBHm_Chr3g0447471 RchiOBHm_Chr6g0267381 |
| rosa_laevigata | RLG00000025995 |
| rosa_multiflora | Rmu_sc0006572.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00344110 Rroxscaffold_6G00425690 |
| rosa_rugosa | Rorug02G0602100 |
| rosa_samantha | Rh2BG278300 Rh3AG002300 Rh3BG001800 Rh3CG002100 Rh3DG002200 |
| rosa_wichuraiana | Rw3G000120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 24 |
| AciI | CCGC | 3 cut(s) | 30, 97, 235 |
| AcoI | YGGCCR | 1 cut(s) | 165 |
| AcsI | RAATTY | 1 cut(s) | 305 |
| AcuI | CTGAAG | 1 cut(s) | 150 |
| AfaI | GTAC | 1 cut(s) | 127 |
| AgsI | TTSAA | 1 cut(s) | 181 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 200, 232 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 28 |
| AluBI | AGCT | 3 cut(s) | 81, 111, 137 |
| AluI | AGCT | 3 cut(s) | 81, 111, 137 |
| AoxI | GGCC | 1 cut(s) | 165 |
| ApoI | RAATTY | 1 cut(s) | 305 |
| BalI | TGGCCA | 1 cut(s) | 167 |
| BfmI | CTRYAG | 1 cut(s) | 54 |
| BisI | GCNGC | 2 cut(s) | 30, 97 |
| BlsI | GCNGC | 2 cut(s) | 31, 98 |
| BsaJI | CCNNGG | 1 cut(s) | 268 |
| BseDI | CCNNGG | 1 cut(s) | 268 |
| BshFI | GGCC | 1 cut(s) | 167 |
| BsnI | GGCC | 1 cut(s) | 167 |
| BspACI | CCGC | 3 cut(s) | 30, 97, 235 |
| BspANI | GGCC | 1 cut(s) | 167 |
| BssECI | CCNNGG | 1 cut(s) | 268 |
| BssNAI | GTATAC | 1 cut(s) | 25 |
| BssT1I | CCWWGG | 1 cut(s) | 268 |
| Bst1107I | GTATAC | 1 cut(s) | 25 |
| Bst4CI | ACNGT | 2 cut(s) | 125, 163 |
| Bst6I | CTCTTC | 1 cut(s) | 179 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 243 |
| BstNSI | RCATGY | 1 cut(s) | 36 |
| BstSFI | CTRYAG | 1 cut(s) | 54 |
| BstZ17I | GTATAC | 1 cut(s) | 25 |
| BsuRI | GGCC | 1 cut(s) | 167 |
| BtgZI | GCGATG | 1 cut(s) | 125 |
| BtsIMutI | CAGTG | 1 cut(s) | 168 |
| Csp6I | GTAC | 1 cut(s) | 126 |
| CviAII | CATG | 4 cut(s) | 8, 16, 33, 300 |
| CviJI | RGCY | 8 cut(s) | 42, 81, 111, 137, 167, 221, 232, 273 |
| CviKI_1 | RGCY | 8 cut(s) | 42, 81, 111, 137, 167, 221, 232, 273 |
| CviQI | GTAC | 1 cut(s) | 126 |
| EaeI | YGGCCR | 1 cut(s) | 165 |
| Eam1104I | CTCTTC | 1 cut(s) | 179 |
| EarI | CTCTTC | 1 cut(s) | 179 |
| Eco130I | CCWWGG | 1 cut(s) | 268 |
| Eco57I | CTGAAG | 1 cut(s) | 150 |
| EcoT14I | CCWWGG | 1 cut(s) | 268 |
| ErhI | CCWWGG | 1 cut(s) | 268 |
| FaeI | CATG | 4 cut(s) | 11, 19, 36, 303 |
| FatI | CATG | 4 cut(s) | 7, 15, 32, 299 |
| FauI | CCCGC | 1 cut(s) | 242 |
| FblI | GTMKAC | 1 cut(s) | 24 |
| Fnu4HI | GCNGC | 2 cut(s) | 30, 97 |
| Fsp4HI | GCNGC | 2 cut(s) | 30, 97 |
| GluI | GCNGC | 2 cut(s) | 30, 97 |
| HaeIII | GGCC | 1 cut(s) | 167 |
| Hin1II | CATG | 4 cut(s) | 11, 19, 36, 303 |
| HinfI | GANTC | 2 cut(s) | 11, 194 |
| Hpy166II | GTNNAC | 1 cut(s) | 25 |
| Hpy188I | TCNGA | 1 cut(s) | 199 |
| Hpy8I | GTNNAC | 1 cut(s) | 25 |
| HpyCH4III | ACNGT | 2 cut(s) | 125, 163 |
| HpyCH4V | TGCA | 3 cut(s) | 246, 280, 291 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 243 |
| Hsp92II | CATG | 4 cut(s) | 11, 19, 36, 303 |
| LpnPI | CCDG | 2 cut(s) | 103, 304 |
| MaeIII | GTNAC | 2 cut(s) | 88, 157 |
| MboII | GAAGA | 3 cut(s) | 143, 193, 196 |
| MfeI | CAATTG | 1 cut(s) | 241 |
| MlsI | TGGCCA | 1 cut(s) | 167 |
| MluCI | AATT | 4 cut(s) | 208, 223, 241, 305 |
| MluNI | TGGCCA | 1 cut(s) | 167 |
| MnlI | CCTC | 1 cut(s) | 32 |
| Mox20I | TGGCCA | 1 cut(s) | 167 |
| MscI | TGGCCA | 1 cut(s) | 167 |
| MslI | CAYNNNNRTG | 1 cut(s) | 298 |
| Msp20I | TGGCCA | 1 cut(s) | 167 |
| MspA1I | CMGCKG | 1 cut(s) | 99 |
| MunI | CAATTG | 1 cut(s) | 241 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 243 |
| NlaIII | CATG | 4 cut(s) | 11, 19, 36, 303 |
| NmuCI | GTSAC | 1 cut(s) | 157 |
| NspI | RCATGY | 1 cut(s) | 36 |
| PfeI | GAWTC | 2 cut(s) | 11, 194 |
| PkrI | GCNGC | 2 cut(s) | 31, 98 |
| RsaI | GTAC | 1 cut(s) | 127 |
| RsaNI | GTAC | 1 cut(s) | 126 |
| RseI | CAYNNNNRTG | 1 cut(s) | 298 |
| SatI | GCNGC | 2 cut(s) | 30, 97 |
| SetI | ASST | 3 cut(s) | 83, 113, 139 |
| SfcI | CTRYAG | 1 cut(s) | 54 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 298 |
| Sse9I | AATT | 4 cut(s) | 208, 223, 241, 305 |
| SsiI | CCGC | 3 cut(s) | 30, 97, 235 |
| StyI | CCWWGG | 1 cut(s) | 268 |
| TaaI | ACNGT | 2 cut(s) | 125, 163 |
| TasI | AATT | 4 cut(s) | 208, 223, 241, 305 |
| TatI | WGTACW | 1 cut(s) | 125 |
| TauI | GCSGC | 2 cut(s) | 32, 99 |
| TfiI | GAWTC | 2 cut(s) | 11, 194 |
| TscAI | CASTG | 1 cut(s) | 168 |
| TseFI | GTSAC | 1 cut(s) | 157 |
| Tsp45I | GTSAC | 1 cut(s) | 157 |
| TspDTI | ATGAA | 4 cut(s) | 17, 24, 93, 221 |
| TspRI | CASTG | 1 cut(s) | 168 |
| XapI | RAATTY | 1 cut(s) | 305 |
| XceI | RCATGY | 1 cut(s) | 36 |
| XmiI | GTMKAC | 1 cut(s) | 24 |