Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0009005

Physical Location & Seq

Genomic Coordinates Forward (+)

72089728 .. 72098993

Gene Structure 9266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0602100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGGGGAAAAAGTGGAAGATAAGAAGAAAGGTTGTACATCGTCTATGCGCTCCGTTTTCATGCATGCCGATGGTGTCGATAAAGTCCTGATGATCTTTGGATTGTTGGGAGCCATCGGTGATGGCTGCTCTACTCCTTTTGTCTTGCTAATCACTGGCCGCTTGATGAACAATGTCGGCGGCGCCTCAAGTGACGCTCAAGATGTTTTCTTGCATAACATCAATATGAATGCAGTGGCGCTATTGTACTTGGCTTGTGGATCATGGGTCAGTTGTTTCCTAGAGGGGTATTGCTGGACAATAACTAGTGAGAGACAAGCAGCTAGAATGAGAGTAACATATTTGAAAGCAGTTCTAAGGCAAGATGTGGGCTACTTTGATCTGCATGTCACAAGCACCTCTGAGGTCATCACCAGCATCTCTAGTGATAGCCTCGTGTTTCAAGACGTCCTCTGTGAAAAGGTGCCAAACTTTATAATGAACTGCTCTTTGTTCTTTGGGAGCTATGTGGCGGCATTCATAATGCTGTGGAGGCTAGCCATCGTTGCATTTCCGTTTGTGGGAAGGATTTTGATGGGACTGGCTAGGCAGATTAGAGATGAATACAACAAGGCTGGAACAATAGCAGAACAGGCACTGTCATCAATCAGAACCGTTTACGCGTTTGTTGGGGAAACGAAAACAATTTCGGAGTTCTCTGCAGCTCTACAAGGCTCGGTGAAGTTGGGATTGAGTCAAGGCCTGGCAAAAGGCTTGGCCATTGGAAGCAACGGCATCGCTTTTGCTATTTGGTCTTTCGTGTCCTACTATGGCAGCAGAATGGTCATGTATCATGGCGCACTTGGAGGCACTGTTGTATCAGCTGGTACTGGAATAATCCTTGGTGGATTGGCATTCGGAAGAGGGTTAACAAACCTGAAGTACTTCTCGGAAGCGTGCTCAGCATCAGAGCGAATAATGGAGGTGATACGGAGAGTCCCCCAGATCGACTCAGACAACATGGAAGGTGAAATGCTAGAGAACGTTTACGGAGAAGTCGAATTCAAGGACGTTGACTTCGCTTACCCCTCAAGGCCAGAAAGCATCATCTTCAACAACTTTAACTTGACGGTTCCAGCTGGGAAAACTGTGGCATTGGTGGGTGGTAGTGGCTCGGGAAAGTCGACAGTGATTTCTTTGTTGCAGAGATTTTATGATCCACTTGGAGGTGAGATACGCATTGATGGGGTGGCCATAAAAAATTGTCAGCTCAAGTGGCTTAGGTCCCAGATGGGGCTGGTGAGCCAAGAGCCTGCTCTTTTTGCAACCAGCATAAAAGAGAACATACTGTTTGGGAAAGAAGATGCTGACATTGAAGAGGTTATAGAGGCTGGTAAAGCTTCTAATGCTCACAATTTCATCTCTCAGTTGCCTCTGGGATATGACACACAGGTTGGTGAGAGAGGTATTCAGATTTCGGGAGGACAGAAGCAAAGAATAGCCATTGCACGAGCAATCATCAAGAAACCACGAATACTCCTTCTAGATGAAGCCACCAGCGCGTTAGACTCCGAATCGGAGCGTGTAGTCCAAGAAGCTCTGGACAAAGCAGCGGTGGGACGTACGACCATCATCATCGCCCACCGCCTCTCCACCATCCGAAACGCCGACGTCATTGTTGTCGTTCAAAACGGGCAGGTCATGGAGACAGGCTCGCACGACGAGCTATTCCAACGTGAAAATGGCCTCTACACTTCACTTGTCCGTTTACAAAAAACAGATCAAGCACATTGTGCATCATCCTCTATTTCAAACATGGACATTCATGACACGAGCAGTCGTAGGCTTTCAATGGTTAGCCGTTCGAGTTCTGCCAACTCATTTGAGGGTCGAGCTTCGTCGGTTCATGGTGGGGAAGATGAGACCGTAGAAGTTAAGAAGCTGCCTGTCCCGTCTTTTCAAAGATTGATGGCTTTGAACCTTCCGGAGTGGAAACAAGCGCTTTTGGGGTGCTTCGGTGCGATATTGTTCGGTACAGTTCAGCCGCTGTTTGCATTCACTCTGGGGTCGACGGTGTCAGTTTACTTCTTGGTGGAGCACGATGAGATCAAGGAGAAGACAAGAATCTATTCTCTGTGTTTTGTTGGGTTGGCTATTCTCTCTTTTCTAGCTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

718

Amino Acids

78.1

Weight (kDa)

6.08

Isoelectric Point (pI)

33.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	31 - 280	2.2e-35	ABC transporter transmembrane region
ABC_tran	PF00005	365 - 513	8.2e-34	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65430
fragaria_vesca	FvH4_6g00130 FvH4_6g00130
malus_domestica	MD04G1248300.v1.1 MD12G1262400.v1.1
prunus_persica	Prupe.6G364600_v2.0.a1
pyrus_communis	pycom04g21900 pycom12g24160
rosa_chinensis	RchiOBHm_Chr2g0127711 RchiOBHm_Chr3g0447471 RchiOBHm_Chr6g0267381
rosa_laevigata	RLG00000025995
rosa_multiflora	Rmu_sc0006572.1_g000005
rosa_roxburghii	Rroxscaffold_5G00344110 Rroxscaffold_6G00425690
rosa_rugosa	Rorug02G0602100
rosa_samantha	Rh2BG278300 Rh3AG002300 Rh3BG001800 Rh3CG002100 Rh3DG002200
rosa_wichuraiana	Rw3G000120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	476
AatII	GACGTC	2 cut(s)	450, 1653
Acc36I	ACCTGC	1 cut(s)	1666
AccB1I	GGYRCC	2 cut(s)	182, 463
AccI	GTMKAC	2 cut(s)	1163, 2048
AccII	CGCG	2 cut(s)	662, 1541
AccIII	TCCGGA	1 cut(s)	1963
AciI	CCGC	6 cut(s)	160, 180, 512, 1592, 1624, 2024
AclI	AACGTT	1 cut(s)	1023
AclWI	GGATC	2 cut(s)	268, 1190
AcoI	YGGCCR	3 cut(s)	157, 756, 1230
AcsI	RAATTY	1 cut(s)	1040
AcuI	CTGAAG	1 cut(s)	938
AcyI	GRCGYC	3 cut(s)	183, 447, 1650
AdeI	CACNNNGTG	1 cut(s)	1772
AfaI	GTAC	6 cut(s)	37, 248, 868, 923, 1603, 2014
AfeI	AGCGCT	1 cut(s)	1980
AfiI	CCNNNNNNNGG	3 cut(s)	560, 1205, 1272
AflIII	ACRYGT	1 cut(s)	660
AhlI	ACTAGT	1 cut(s)	305
AjnI	CCWGG	1 cut(s)	741
Alw21I	GWGCWC	2 cut(s)	941, 2079
Alw26I	GTCTC	3 cut(s)	307, 1679, 1895
AlwI	GGATC	2 cut(s)	268, 1190
AlwNI	CAGNNNCTG	2 cut(s)	637, 2026
Ama87I	CYCGRG	1 cut(s)	1153
Aor13HI	TCCGGA	1 cut(s)	1963
Aor51HI	AGCGCT	1 cut(s)	1980
AoxI	GGCC	6 cut(s)	157, 739, 756, 1073, 1230, 1723
ApeKI	GCWGC	6 cut(s)	126, 320, 701, 813, 1589, 1921
ApoI	RAATTY	1 cut(s)	1040
ArsI	GACNNNNNNTTYG	2 cut(s)	1040, 1072
Asp700I	GAANNNNTTC	2 cut(s)	923, 2107
AspLEI	GCGC	6 cut(s)	51, 185, 241, 839, 1541, 1981
AspS9I	GGNCC	1 cut(s)	1263
AsuHPI	GGTGA	8 cut(s)	131, 403, 730, 976, 1019, 1220, 1291, 1448
AsuNHI	GCTAGC	1 cut(s)	535
AvaI	CYCGRG	1 cut(s)	1153
AvaII	GGWCC	1 cut(s)	1263
BaeI	ACNNNNGTAYC	2 cut(s)	840, 873
BalI	TGGCCA	2 cut(s)	758, 1232
BanI	GGYRCC	2 cut(s)	182, 463
BauI	CACGAG	3 cut(s)	434, 1488, 1810
BbsI	GAAGAC	1 cut(s)	2102
Bbv12I	GWGCWC	2 cut(s)	941, 2079
BbvI	GCAGC	6 cut(s)	113, 332, 713, 825, 1601, 1908
BceAI	ACGGC	2 cut(s)	787, 1824
BcgI	CGANNNNNNTGC	2 cut(s)	757, 791
BciT130I	CCWGG	1 cut(s)	743
BcoDI	GTCTC	3 cut(s)	307, 1679, 1895
BcuI	ACTAGT	1 cut(s)	305
BfmI	CTRYAG	1 cut(s)	699
BfoI	RGCGCY	3 cut(s)	186, 242, 1982
BfuAI	ACCTGC	1 cut(s)	1666
BlpI	GCTNAGC	1 cut(s)	940
BmcAI	AGTACT	1 cut(s)	923
Bme1390I	CCNGG	1 cut(s)	743
Bme18I	GGWCC	1 cut(s)	1263
BmeT110I	CYCGRG	1 cut(s)	1153
BmgT120I	GGNCC	1 cut(s)	1263
BmiI	GGNNCC	5 cut(s)	112, 184, 465, 1113, 1265
BmrFI	CCNGG	1 cut(s)	743
BmsI	GCATC	6 cut(s)	426, 783, 953, 1092, 1333, 1784
BmtI	GCTAGC	1 cut(s)	539
BpiI	GAAGAC	1 cut(s)	2102
BplI	GAGNNNNNCTC	2 cut(s)	1676, 1708
Bpu10I	CCTNAGC	1 cut(s)	1259
Bpu1102I	GCTNAGC	1 cut(s)	940
BpuEI	CTTGAG	4 cut(s)	172, 183, 1054, 1235
BsaHI	GRCGYC	3 cut(s)	183, 447, 1650
BsaI	GGTCTC	1 cut(s)	1895
BsaJI	CCNNGG	1 cut(s)	880
BsaWI	WCCGGW	1 cut(s)	1963
BsaXI	ACNNNNNCTCC	6 cut(s)	837, 867, 1500, 1530, 1613, 1643
Bsc4I	CCNNNNNNNGG	3 cut(s)	560, 1205, 1272
Bse1I	ACTGG	3 cut(s)	160, 585, 874
Bse3DI	GCAATG	1 cut(s)	1482
BseAI	TCCGGA	1 cut(s)	1963
BseBI	CCWGG	1 cut(s)	743
BseDI	CCNNGG	1 cut(s)	880
BseGI	GGATG	2 cut(s)	1635, 1778
BseLI	CCNNNNNNNGG	3 cut(s)	560, 1205, 1272
BseMI	GCAATG	1 cut(s)	1482
BseMII	CTCAG	4 cut(s)	393, 954, 1005, 1418
BseNI	ACTGG	3 cut(s)	160, 585, 874
BseXI	GCAGC	6 cut(s)	113, 332, 713, 825, 1601, 1908
BseYI	CCCAGC	1 cut(s)	1118
Bsh1236I	CGCG	2 cut(s)	662, 1541
BshFI	GGCC	6 cut(s)	159, 741, 758, 1075, 1232, 1725
BshNI	GGYRCC	2 cut(s)	182, 463
BsiHKAI	GWGCWC	2 cut(s)	941, 2079
BsiHKCI	CYCGRG	1 cut(s)	1153
BsiSI	CCGG	1 cut(s)	1964
BsiWI	CGTACG	1 cut(s)	1601
BslFI	GGGAC	5 cut(s)	591, 962, 1249, 1611, 1913
BslI	CCNNNNNNNGG	3 cut(s)	560, 1205, 1272
BsmAI	GTCTC	3 cut(s)	307, 1679, 1895
BsmFI	GGGAC	5 cut(s)	591, 962, 1249, 1611, 1913
BsmI	GAATGC	4 cut(s)	235, 515, 893, 2033
BsnI	GGCC	6 cut(s)	159, 741, 758, 1075, 1232, 1725
Bso31I	GGTCTC	1 cut(s)	1895
BsoBI	CYCGRG	1 cut(s)	1153
Bsp1286I	GDGCHC	2 cut(s)	941, 2079
Bsp13I	TCCGGA	1 cut(s)	1963
Bsp1407I	TGTACA	1 cut(s)	35
Bsp143I	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
Bsp1720I	GCTNAGC	1 cut(s)	940
BspACI	CCGC	6 cut(s)	160, 180, 512, 1592, 1624, 2024
BspANI	GGCC	6 cut(s)	159, 741, 758, 1075, 1232, 1725
BspCNI	CTCAG	4 cut(s)	394, 953, 1004, 1417
BspEI	TCCGGA	1 cut(s)	1963
BspFNI	CGCG	2 cut(s)	662, 1541
BspHI	TCATGA	1 cut(s)	1804
BspLI	GGNNCC	5 cut(s)	112, 184, 465, 1113, 1265
BspMAI	CTGCAG	1 cut(s)	703
BspMI	ACCTGC	1 cut(s)	1666
BspOI	GCTAGC	1 cut(s)	539
BspPI	GGATC	2 cut(s)	268, 1190
BspT107I	GGYRCC	2 cut(s)	182, 463
BspTNI	GGTCTC	1 cut(s)	1895
BsrDI	GCAATG	1 cut(s)	1482
BsrGI	TGTACA	1 cut(s)	35
BsrI	ACTGG	3 cut(s)	160, 585, 874
BssECI	CCNNGG	1 cut(s)	880
BssMI	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
BssNI	GRCGYC	3 cut(s)	183, 447, 1650
BssSI	CACGAG	3 cut(s)	434, 1488, 1810
BssT1I	CCWWGG	1 cut(s)	880
Bst2BI	CACGAG	3 cut(s)	434, 1488, 1810
Bst2UI	CCWGG	1 cut(s)	743
Bst6I	CTCTTC	2 cut(s)	895, 1350
BstACI	GRCGYC	3 cut(s)	183, 447, 1650
BstAPI	GCANNNNNTGC	1 cut(s)	1772
BstAUI	TGTACA	1 cut(s)	35
BstC8I	GCNNGC	5 cut(s)	66, 537, 937, 1293, 1694
BstDEI	CTNAG	6 cut(s)	356, 402, 940, 991, 1259, 1404
BstF5I	GGATG	2 cut(s)	1635, 1778
BstFNI	CGCG	2 cut(s)	662, 1541
BstH2I	RGCGCY	3 cut(s)	186, 242, 1982
BstHHI	GCGC	6 cut(s)	51, 185, 241, 839, 1541, 1981
BstKTI	GATC	7 cut(s)	96, 263, 382, 987, 1198, 1762, 2088
BstMAI	GTCTC	3 cut(s)	307, 1679, 1895
BstMBI	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
BstNI	CCWGG	1 cut(s)	743
BstNSI	RCATGY	2 cut(s)	68, 389
BstSCI	CCNGG	1 cut(s)	741
BstSFI	CTRYAG	1 cut(s)	699
BstUI	CGCG	2 cut(s)	662, 1541
BstV1I	GCAGC	6 cut(s)	113, 332, 713, 825, 1601, 1908
BstV2I	GAAGAC	1 cut(s)	2102
BsuRI	GGCC	6 cut(s)	159, 741, 758, 1075, 1232, 1725
BtgZI	GCGATG	2 cut(s)	760, 1600
BtsCI	GGATG	2 cut(s)	1635, 1778
BtsI	GCAGTG	1 cut(s)	240
BtsIMutI	CAGTG	5 cut(s)	153, 240, 635, 849, 1173
BveI	ACCTGC	1 cut(s)	1666
Cac8I	GCNNGC	5 cut(s)	66, 537, 937, 1293, 1694
CaiI	CAGNNNCTG	2 cut(s)	637, 2026
CciI	TCATGA	1 cut(s)	1804
CfoI	GCGC	6 cut(s)	51, 185, 241, 839, 1541, 1981
Cfr13I	GGNCC	1 cut(s)	1263
CseI	GACGC	1 cut(s)	203
Csp6I	GTAC	6 cut(s)	36, 247, 867, 922, 1602, 2013
CviQI	GTAC	6 cut(s)	36, 247, 867, 922, 1602, 2013
DdeI	CTNAG	6 cut(s)	356, 402, 940, 991, 1259, 1404
DinI	GGCGCC	1 cut(s)	184
DpnI	GATC	7 cut(s)	95, 262, 381, 986, 1197, 1761, 2087
DpnII	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
DraIII	CACNNNGTG	1 cut(s)	1772
EaeI	YGGCCR	3 cut(s)	157, 756, 1230
Eam1104I	CTCTTC	2 cut(s)	895, 1350
EarI	CTCTTC	2 cut(s)	895, 1350
Eco130I	CCWWGG	1 cut(s)	880
Eco147I	AGGCCT	1 cut(s)	741
Eco31I	GGTCTC	1 cut(s)	1895
Eco47I	GGWCC	1 cut(s)	1263
Eco47III	AGCGCT	1 cut(s)	1980
Eco57I	CTGAAG	1 cut(s)	938
Eco88I	CYCGRG	1 cut(s)	1153
EcoO109I	RGGNCCY	1 cut(s)	1263
EcoRI	GAATTC	1 cut(s)	1040
EcoRII	CCWGG	1 cut(s)	741
EcoT14I	CCWWGG	1 cut(s)	880
EcoT22I	ATGCAT	1 cut(s)	66
EgeI	GGCGCC	1 cut(s)	184
EheI	GGCGCC	1 cut(s)	184
ErhI	CCWWGG	1 cut(s)	880
FaqI	GGGAC	5 cut(s)	591, 962, 1249, 1611, 1913
FblI	GTMKAC	2 cut(s)	1163, 2048
FokI	GGATG	2 cut(s)	1622, 1765
GlaI	GCGC	6 cut(s)	50, 184, 240, 838, 1540, 1980
GsaI	CCCAGC	1 cut(s)	1122
HaeII	RGCGCY	3 cut(s)	186, 242, 1982
HaeIII	GGCC	6 cut(s)	159, 741, 758, 1075, 1232, 1725
HapII	CCGG	1 cut(s)	1964
HgaI	GACGC	1 cut(s)	203
HhaI	GCGC	6 cut(s)	51, 185, 241, 839, 1541, 1981
Hin1I	GRCGYC	3 cut(s)	183, 447, 1650
Hin6I	GCGC	6 cut(s)	49, 183, 239, 837, 1539, 1979
HinP1I	GCGC	6 cut(s)	49, 183, 239, 837, 1539, 1979
HincII	GTYRAC	4 cut(s)	909, 1054, 1164, 2049
HindII	GTYRAC	4 cut(s)	909, 1054, 1164, 2049
HindIII	AAGCTT	1 cut(s)	1377
HinfI	GANTC	6 cut(s)	733, 975, 989, 1547, 1553, 2103
HpaI	GTTAAC	1 cut(s)	909
HpaII	CCGG	1 cut(s)	1964
HphI	GGTGA	8 cut(s)	131, 403, 730, 976, 1019, 1220, 1291, 1448
Hpy166II	GTNNAC	8 cut(s)	658, 909, 1027, 1054, 1164, 1748, 2049, 2062
Hpy8I	GTNNAC	8 cut(s)	658, 909, 1027, 1054, 1164, 1748, 2049, 2062
Hpy99I	CGWCG	4 cut(s)	1652, 1703, 1882, 2053
HpyAV	CCTTC	4 cut(s)	558, 998, 1529, 1970
HpyCH4IV	ACGT	6 cut(s)	447, 1023, 1050, 1600, 1650, 1714
HpyF3I	CTNAG	6 cut(s)	356, 402, 940, 991, 1259, 1404
HpySE526I	ACGT	6 cut(s)	447, 1023, 1050, 1600, 1650, 1714
Hsp92I	GRCGYC	3 cut(s)	183, 447, 1650
HspAI	GCGC	6 cut(s)	49, 183, 239, 837, 1539, 1979
KasI	GGCGCC	1 cut(s)	182
Kpn2I	TCCGGA	1 cut(s)	1963
KspAI	GTTAAC	1 cut(s)	909
Kzo9I	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
LmnI	GCTCC	5 cut(s)	56, 110, 501, 1558, 2074
Lsp1109I	GCAGC	6 cut(s)	113, 332, 713, 825, 1601, 1908
LweI	GCATC	6 cut(s)	426, 783, 953, 1092, 1333, 1784
MaeII	ACGT	6 cut(s)	447, 1023, 1050, 1600, 1650, 1714
MaeIII	GTNAC	3 cut(s)	191, 334, 388
MalI	GATC	7 cut(s)	95, 262, 381, 986, 1197, 1761, 2087
MboI	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
MboII	GAAGA	8 cut(s)	29, 37, 912, 1081, 1352, 1367, 1907, 2107
MhlI	GDGCHC	2 cut(s)	941, 2079
MlsI	TGGCCA	2 cut(s)	758, 1232
MluCI	AATT	4 cut(s)	684, 1040, 1240, 1393
MluI	ACGCGT	1 cut(s)	660
MluNI	TGGCCA	2 cut(s)	758, 1232
Mly113I	GGCGCC	1 cut(s)	183
MlyI	GAGTC	4 cut(s)	742, 983, 984, 1541
MmeI	TCCRAC	1 cut(s)	1735
Mox20I	TGGCCA	2 cut(s)	758, 1232
Mph1103I	ATGCAT	1 cut(s)	66
MroI	TCCGGA	1 cut(s)	1963
MroXI	GAANNNNTTC	2 cut(s)	923, 2107
MscI	TGGCCA	2 cut(s)	758, 1232
MseI	TTAA	4 cut(s)	908, 1101, 1914, 2155
MslI	CAYNNNNRTG	2 cut(s)	69, 224
Msp20I	TGGCCA	2 cut(s)	758, 1232
MspA1I	CMGCKG	4 cut(s)	863, 1118, 1592, 2026
MspI	CCGG	1 cut(s)	1964
MspR9I	CCNGG	1 cut(s)	743
Mva1269I	GAATGC	4 cut(s)	235, 515, 893, 2033
MvaI	CCWGG	1 cut(s)	743
MvnI	CGCG	2 cut(s)	662, 1541
NarI	GGCGCC	1 cut(s)	183
NdeII	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
NheI	GCTAGC	1 cut(s)	535
NlaIV	GGNNCC	5 cut(s)	112, 184, 465, 1113, 1265
NmuCI	GTSAC	2 cut(s)	191, 388
NsiI	ATGCAT	1 cut(s)	66
NspI	RCATGY	2 cut(s)	68, 389
PaeI	GCATGC	1 cut(s)	68
PagI	TCATGA	1 cut(s)	1804
PceI	AGGCCT	1 cut(s)	741
PcsI	WCGNNNNNNNCGW	2 cut(s)	1035, 1160
PctI	GAATGC	4 cut(s)	235, 515, 893, 2033
PdmI	GAANNNNTTC	2 cut(s)	923, 2107
PfeI	GAWTC	2 cut(s)	1553, 2103
Pfl23II	CGTACG	1 cut(s)	1601
PflFI	GACNNNGTC	1 cut(s)	2053
PleI	GAGTC	4 cut(s)	741, 983, 983, 1541
PluTI	GGCGCC	1 cut(s)	186
PpsI	GAGTC	4 cut(s)	741, 983, 983, 1541
PpuMI	RGGWCCY	1 cut(s)	1263
PsiI	TTATAA	1 cut(s)	476
Psp1406I	AACGTT	1 cut(s)	1023
Psp5II	RGGWCCY	1 cut(s)	1263
Psp6I	CCWGG	1 cut(s)	741
PspFI	CCCAGC	1 cut(s)	1118
PspGI	CCWGG	1 cut(s)	741
PspLI	CGTACG	1 cut(s)	1601
PspN4I	GGNNCC	5 cut(s)	112, 184, 465, 1113, 1265
PspPI	GGNCC	1 cut(s)	1263
PspPPI	RGGWCCY	1 cut(s)	1263
PstI	CTGCAG	1 cut(s)	703
PstNI	CAGNNNCTG	2 cut(s)	637, 2026
PsyI	GACNNNGTC	1 cut(s)	2053
PvuII	CAGCTG	2 cut(s)	863, 1118
RsaI	GTAC	6 cut(s)	37, 248, 868, 923, 1603, 2014
RsaNI	GTAC	6 cut(s)	36, 247, 867, 922, 1602, 2013
RseI	CAYNNNNRTG	2 cut(s)	69, 224
SalI	GTCGAC	2 cut(s)	1162, 2047
SaqAI	TTAA	4 cut(s)	908, 1101, 1914, 2155
Sau3AI	GATC	7 cut(s)	93, 260, 379, 984, 1195, 1759, 2085
Sau96I	GGNCC	1 cut(s)	1263
ScaI	AGTACT	1 cut(s)	923
SchI	GAGTC	4 cut(s)	742, 983, 984, 1541
ScrFI	CCNGG	1 cut(s)	743
SduI	GDGCHC	2 cut(s)	941, 2079
SfaNI	GCATC	6 cut(s)	426, 783, 953, 1092, 1333, 1784
SfcI	CTRYAG	1 cut(s)	699
SfoI	GGCGCC	1 cut(s)	184
SinI	GGWCC	1 cut(s)	1263
SmiMI	CAYNNNNRTG	2 cut(s)	69, 224
SmlI	CTYRAG	4 cut(s)	187, 198, 1069, 1250
SmoI	CTYRAG	4 cut(s)	187, 198, 1069, 1250
SpeI	ACTAGT	1 cut(s)	305
SphI	GCATGC	1 cut(s)	68
Sse9I	AATT	4 cut(s)	684, 1040, 1240, 1393
SseBI	AGGCCT	1 cut(s)	741
SsiI	CCGC	6 cut(s)	160, 180, 512, 1592, 1624, 2024
SspDI	GGCGCC	1 cut(s)	182
StuI	AGGCCT	1 cut(s)	741
StyD4I	CCNGG	1 cut(s)	741
StyI	CCWWGG	1 cut(s)	880
TaiI	ACGT	6 cut(s)	450, 1026, 1053, 1603, 1653, 1717
TaqI	TCGA	7 cut(s)	78, 987, 1038, 1163, 1844, 1870, 2048
TasI	AATT	4 cut(s)	684, 1040, 1240, 1393
TatI	WGTACW	3 cut(s)	35, 246, 921
TauI	GCSGC	4 cut(s)	162, 183, 515, 2026
TfiI	GAWTC	2 cut(s)	1553, 2103
Tru1I	TTAA	4 cut(s)	908, 1101, 1914, 2155
Tru9I	TTAA	4 cut(s)	908, 1101, 1914, 2155
TscAI	CASTG	5 cut(s)	160, 240, 642, 856, 1173
TseFI	GTSAC	2 cut(s)	191, 388
TseI	GCWGC	6 cut(s)	126, 320, 701, 813, 1589, 1921
Tsp45I	GTSAC	2 cut(s)	191, 388
TspGWI	ACGGA	5 cut(s)	43, 543, 985, 1044, 1733
TspRI	CASTG	5 cut(s)	160, 240, 642, 856, 1173
Tth111I	GACNNNGTC	1 cut(s)	2053
VpaK11BI	GGWCC	1 cut(s)	1263
XapI	RAATTY	1 cut(s)	1040
XbaI	TCTAGA	1 cut(s)	1522
XceI	RCATGY	2 cut(s)	68, 389
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1718
XmiI	GTMKAC	2 cut(s)	1163, 2048
XmnI	GAANNNNTTC	2 cut(s)	923, 2107
ZraI	GACGTC	2 cut(s)	448, 1651
ZrmI	AGTACT	1 cut(s)	923
Zsp2I	ATGCAT	1 cut(s)	66

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.