Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0009005

Physical Location & Seq

Genomic Coordinates Reverse (-)

49712175 .. 49717700

Gene Structure 5526 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025995

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGACCCCATCTCCGTGAAACCACAACCTACCATAAAAGTTTGTACTGCTGCGGCATGTTCTATCGGTTTGGCCCTGCAAAACTACACTGTTTTGACAGAAGCTGACATTCATCAACATCAAGAGGAGGATATTACAAAGATATCTACAGTGCTTTCCATCTCAAAGGCTGCAGCTAGCATACTGCTCCGCTACTATAATTGGAGTGTAAGCAAAGTACATGATGAGTGGTTTGCAGATGAAGAAAAGGTTCGCAAGACTGTTGGCTTACCGGAGAAACCAGTTATTGAATACCGTAATGCTAAAGAACTTAATTGTGGGATTTGTTTTGACACCTATCCTTGTGAAGAGATGCATGCTGCAGCTTGTGGTCATCCTTTTTGTGACTCATGCTGGGCAGGTTATATTGGTACGGCAATTAATGATGGTCCTGGATGTTTAATGTTGCGCTGTCCTGATCCATCTTGTGGTGCTGTTGTTTTCCAAGATATGATTAATGAACTGGCTTCCAATGAAGACAGGGACAAATATTCTCGTTACTTTATTAGATCTTATGTTGAGGACAACAGGAAGACCAAATGGTGTCCTGCTCCCGGCTGTGATTATGCTATAGATTTTATTGTTGGTAGTGGAAGCTATGATGTTACTTGCCGCTGTTCATATAGCTTTTGCTGGAACTGTACTGAAGAAGCTCATCGCCCCGTTGATTGTGGCACAGTGGCCAAATGGATATTGAAGAACAGTGCCGAATCTGAAAATATGAATTGGATATTGGCTAATTCCAAGCCCTGCCCCAAGTGCAAACGACCTATTGAGAAAAACCAAGGCTGTATGCATATCACTTGCACACCACCTTGTAAATTTGAGTTTTGCTGGCTCTGTCTTGGTGCATGGTCAGAACATGGTGAAAGGACAGGTGGCTTTTATGCCTGTAACCGCTATGAGACAGCAAAGCAGGAGGGAGTGTATGATGAGGCAGAGAAACGAAGAGAGATGGCCAAGAACTCTCTAGAGAGGTACACCCATTATTATGAAAGATGGGCAACCAATCAGTCGTCCAGACAAAAAGCACTAGCAGACTTGCAGCAGATGCAGACTGTGCATCTTGAGAAGTTGAGCGACATCCAGTGCCAACCTGAGTCACAGCTGAAGTTCATTACAGAGGCCTGGTTACAGATAGTTGAGTGTAGGCGAGTACTGAAATGGACATATGCCTATGGATATTATTTACCTGAGCACGAACATGCCAAGAGACAGTTCTTTGAATACTTGCAAGGTGAGGCCGAGTCTGGGTTGGAACGACTTCATCAATGTGCAGAAAAGGAGCTGCAAGTTTATCTCAATGAAGAGGACCCACCAAAAGATTTTAATGAGTTTCGCACAAAACTTGCTGGATTGACCAGCGTGACACGAAACTACTTTGAAAATTTAGTTCGAGCTCTGGAGAATGGTCTGTCAGATGTGGACTCCATTGGTGCAAGCAGCAAGACGGCAAACTCAAAGAGTTTGGGAGGTGCAAGCAGCAAGGGAAGAGGTGGGAGGGGCAAGGCTACAACATCCAGGTCAAGTAGCTCCAATAGGAATATTGATGATTTAGTCCCCTGGTCCTGTGAACATTGCACCTTTGCAAATGTGAGGTCAGCCACTGTCTGCCAGATGTGCCAACAACGCCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

559

Amino Acids

63.34

Weight (kDa)

6.11

Isoelectric Point (pI)

54.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	39 - 78	9.4e-10	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	175 - 237	2.2e-16	IBR domain, a half RING-finger domain
IBR	PF01485	254 - 300	3.3e-07	IBR domain, a half RING-finger domain
IBR_1	PF22191	259 - 299	2.5e-14	IBR domain
IBR_2	PF22605	260 - 299	4.1e-12	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65430
fragaria_vesca	FvH4_6g00130 FvH4_6g00130
malus_domestica	MD04G1248300.v1.1 MD12G1262400.v1.1
prunus_persica	Prupe.6G364600_v2.0.a1
pyrus_communis	pycom04g21900 pycom12g24160
rosa_chinensis	RchiOBHm_Chr2g0127711 RchiOBHm_Chr3g0447471 RchiOBHm_Chr6g0267381
rosa_laevigata	RLG00000025995
rosa_multiflora	Rmu_sc0006572.1_g000005
rosa_roxburghii	Rroxscaffold_5G00344110 Rroxscaffold_6G00425690
rosa_rugosa	Rorug02G0602100
rosa_samantha	Rh2BG278300 Rh3AG002300 Rh3BG001800 Rh3CG002100 Rh3DG002200
rosa_wichuraiana	Rw3G000120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	389
AccB7I	CCANNNNNTGG	1 cut(s)	467
AciI	CCGC	4 cut(s)	53, 190, 652, 937
AclWI	GGATC	1 cut(s)	452
AcoI	YGGCCR	2 cut(s)	720, 996
AcsI	RAATTY	2 cut(s)	860, 1426
AcuI	CTGAAG	2 cut(s)	705, 1169
AfaI	GTAC	6 cut(s)	46, 219, 412, 682, 1019, 1197
AfiI	CCNNNNNNNGG	3 cut(s)	467, 593, 1290
AgsI	TTSAA	4 cut(s)	290, 736, 1265, 1424
AjnI	CCWGG	4 cut(s)	430, 1166, 1559, 1601
AjuI	GAANNNNNNNTTGG	4 cut(s)	755, 787, 1241, 1273
Alw21I	GWGCWC	2 cut(s)	1239, 1441
Alw26I	GTCTC	2 cut(s)	938, 1246
AlwI	GGATC	1 cut(s)	452
AlwNI	CAGNNNCTG	2 cut(s)	104, 1646
AoxI	GGCC	5 cut(s)	72, 720, 996, 1164, 1281
ApeKI	GCWGC	9 cut(s)	50, 170, 173, 359, 362, 1084, 1327, 1482, 1521
ApoI	RAATTY	2 cut(s)	860, 1426
ArsI	GACNNNNNNTTYG	2 cut(s)	1622, 1654
AseI	ATTAAT	2 cut(s)	420, 495
Asp700I	GAANNNNTTC	2 cut(s)	249, 1302
AspLEI	GCGC	1 cut(s)	450
AspS9I	GGNCC	5 cut(s)	4, 73, 428, 1351, 1605
AsuC2I	CCSGG	1 cut(s)	594
AsuHPI	GGTGA	2 cut(s)	917, 1289
AsuNHI	GCTAGC	1 cut(s)	176
AvaII	GGWCC	4 cut(s)	4, 428, 1351, 1605
BalI	TGGCCA	2 cut(s)	722, 998
BanII	GRGCYC	1 cut(s)	1441
BbsI	GAAGAC	2 cut(s)	522, 578
Bbv12I	GWGCWC	2 cut(s)	1239, 1441
BbvI	GCAGC	9 cut(s)	37, 157, 185, 346, 374, 1096, 1314, 1494, 1533
BccI	CCATC	6 cut(s)	17, 167, 419, 469, 988, 1032
BceAI	ACGGC	2 cut(s)	429, 1506
BciT130I	CCWGG	4 cut(s)	432, 1168, 1561, 1603
BcnI	CCSGG	1 cut(s)	594
BcoDI	GTCTC	2 cut(s)	938, 1246
BfaI	CTAG	3 cut(s)	177, 1010, 1073
BfmI	CTRYAG	4 cut(s)	147, 171, 360, 609
BfuAI	ACCTGC	1 cut(s)	389
BglII	AGATCT	1 cut(s)	548
BmcAI	AGTACT	1 cut(s)	1197
Bme1390I	CCNGG	5 cut(s)	432, 594, 1168, 1561, 1603
Bme18I	GGWCC	4 cut(s)	4, 428, 1351, 1605
BmgT120I	GGNCC	5 cut(s)	4, 73, 428, 1351, 1605
BmiI	GGNNCC	2 cut(s)	6, 1353
BmrFI	CCNGG	5 cut(s)	432, 594, 1168, 1561, 1603
BmsI	GCATC	3 cut(s)	342, 1080, 1111
BmtI	GCTAGC	1 cut(s)	180
BpiI	GAAGAC	2 cut(s)	522, 578
BpmI	CTGGAG	1 cut(s)	1463
Bpu10I	CCTNAGC	1 cut(s)	1233
BpuEI	CTTGAG	1 cut(s)	1127
BpuMI	CCSGG	1 cut(s)	594
BsaJI	CCNNGG	2 cut(s)	823, 1601
BsaWI	WCCGGW	1 cut(s)	271
BsaXI	ACNNNNNCTCC	3 cut(s)	26, 950, 980
Bsc4I	CCNNNNNNNGG	3 cut(s)	467, 593, 1290
Bse118I	RCCGGY	1 cut(s)	1671
Bse1I	ACTGG	3 cut(s)	281, 507, 1126
Bse3DI	GCAATG	1 cut(s)	1615
BseBI	CCWGG	4 cut(s)	432, 1168, 1561, 1603
BseDI	CCNNGG	2 cut(s)	823, 1601
BseGI	GGATG	4 cut(s)	373, 440, 1122, 1556
BseLI	CCNNNNNNNGG	3 cut(s)	467, 593, 1290
BseMI	GCAATG	1 cut(s)	1615
BseMII	CTCAG	2 cut(s)	1128, 1224
BseNI	ACTGG	3 cut(s)	281, 507, 1126
BseRI	GAGGAG	1 cut(s)	140
BseXI	GCAGC	9 cut(s)	37, 157, 185, 346, 374, 1096, 1314, 1494, 1533
BseYI	CCCAGC	1 cut(s)	393
BsgI	GTGCAG	1 cut(s)	1335
BshFI	GGCC	5 cut(s)	74, 722, 998, 1166, 1283
BsiHKAI	GWGCWC	2 cut(s)	1239, 1441
BsiSI	CCGG	3 cut(s)	272, 594, 1672
BslFI	GGGAC	2 cut(s)	536, 1583
BslI	CCNNNNNNNGG	3 cut(s)	467, 593, 1290
BsmAI	GTCTC	2 cut(s)	938, 1246
BsmFI	GGGAC	2 cut(s)	536, 1583
BsnI	GGCC	5 cut(s)	74, 722, 998, 1166, 1283
Bsp1286I	GDGCHC	2 cut(s)	1239, 1441
Bsp143I	GATC	2 cut(s)	457, 548
BspACI	CCGC	4 cut(s)	53, 190, 652, 937
BspANI	GGCC	5 cut(s)	74, 722, 998, 1166, 1283
BspCNI	CTCAG	2 cut(s)	1129, 1225
BspLI	GGNNCC	2 cut(s)	6, 1353
BspMAI	CTGCAG	2 cut(s)	175, 364
BspMI	ACCTGC	1 cut(s)	389
BspOI	GCTAGC	1 cut(s)	180
BspPI	GGATC	1 cut(s)	452
BsrDI	GCAATG	1 cut(s)	1615
BsrFI	RCCGGY	1 cut(s)	1671
BsrI	ACTGG	3 cut(s)	281, 507, 1126
BssAI	RCCGGY	1 cut(s)	1671
BssECI	CCNNGG	2 cut(s)	823, 1601
BssMI	GATC	2 cut(s)	457, 548
BssT1I	CCWWGG	1 cut(s)	823
Bst2UI	CCWGG	4 cut(s)	432, 1168, 1561, 1603
Bst6I	CTCTTC	4 cut(s)	342, 982, 1341, 1525
BstAPI	GCANNNNNTGC	2 cut(s)	1090, 1099
BstC8I	GCNNGC	5 cut(s)	178, 357, 875, 1480, 1519
BstDEI	CTNAG	2 cut(s)	1137, 1233
BstF5I	GGATG	4 cut(s)	373, 440, 1122, 1556
BstHHI	GCGC	1 cut(s)	450
BstKTI	GATC	2 cut(s)	460, 551
BstMAI	GTCTC	2 cut(s)	938, 1246
BstMBI	GATC	2 cut(s)	457, 548
BstMWI	GCNNNNNNNGC	5 cut(s)	798, 1090, 1099, 1659, 1668
BstNI	CCWGG	4 cut(s)	432, 1168, 1561, 1603
BstNSI	RCATGY	3 cut(s)	60, 359, 1247
BstSCI	CCNGG	5 cut(s)	430, 592, 1166, 1559, 1601
BstSFI	CTRYAG	4 cut(s)	147, 171, 360, 609
BstV1I	GCAGC	9 cut(s)	37, 157, 185, 346, 374, 1096, 1314, 1494, 1533
BstV2I	GAAGAC	2 cut(s)	522, 578
BstX2I	RGATCY	1 cut(s)	548
BstYI	RGATCY	1 cut(s)	548
BsuRI	GGCC	5 cut(s)	74, 722, 998, 1166, 1283
BtgZI	GCGATG	1 cut(s)	680
BtsCI	GGATG	4 cut(s)	373, 440, 1122, 1556
BtsIMutI	CAGTG	6 cut(s)	87, 156, 723, 748, 1133, 1644
BveI	ACCTGC	1 cut(s)	389
Cac8I	GCNNGC	5 cut(s)	178, 357, 875, 1480, 1519
CaiI	CAGNNNCTG	2 cut(s)	104, 1646
CfoI	GCGC	1 cut(s)	450
Cfr10I	RCCGGY	1 cut(s)	1671
Cfr13I	GGNCC	5 cut(s)	4, 73, 428, 1351, 1605
Csp6I	GTAC	6 cut(s)	45, 218, 411, 681, 1018, 1196
CviAII	CATG	7 cut(s)	57, 221, 356, 390, 891, 902, 1244
CviQI	GTAC	6 cut(s)	45, 218, 411, 681, 1018, 1196
DdeI	CTNAG	2 cut(s)	1137, 1233
DpnI	GATC	2 cut(s)	459, 550
DpnII	GATC	2 cut(s)	457, 548
EaeI	YGGCCR	2 cut(s)	720, 996
Eam1104I	CTCTTC	4 cut(s)	342, 982, 1341, 1525
EarI	CTCTTC	4 cut(s)	342, 982, 1341, 1525
Ecl136II	GAGCTC	1 cut(s)	1439
Eco130I	CCWWGG	1 cut(s)	823
Eco147I	AGGCCT	1 cut(s)	1166
Eco24I	GRGCYC	1 cut(s)	1441
Eco32I	GATATC	1 cut(s)	144
Eco47I	GGWCC	4 cut(s)	4, 428, 1351, 1605
Eco53kI	GAGCTC	1 cut(s)	1439
Eco57I	CTGAAG	2 cut(s)	705, 1169
EcoICRI	GAGCTC	1 cut(s)	1439
EcoO109I	RGGNCCY	1 cut(s)	1351
EcoRII	CCWGG	4 cut(s)	430, 1166, 1559, 1601
EcoRV	GATATC	1 cut(s)	144
EcoT14I	CCWWGG	1 cut(s)	823
EcoT22I	ATGCAT	2 cut(s)	357, 837
EcoT38I	GRGCYC	1 cut(s)	1441
ErhI	CCWWGG	1 cut(s)	823
FaeI	CATG	7 cut(s)	60, 224, 359, 393, 894, 905, 1247
FaqI	GGGAC	2 cut(s)	536, 1583
FatI	CATG	7 cut(s)	56, 220, 355, 389, 890, 901, 1243
FauNDI	CATATG	1 cut(s)	1210
FokI	GGATG	4 cut(s)	360, 447, 1109, 1543
FriOI	GRGCYC	1 cut(s)	1441
FspBI	CTAG	3 cut(s)	177, 1010, 1073
GlaI	GCGC	1 cut(s)	449
GsaI	CCCAGC	1 cut(s)	397
GsuI	CTGGAG	1 cut(s)	1463
HaeIII	GGCC	5 cut(s)	74, 722, 998, 1166, 1283
HapII	CCGG	3 cut(s)	272, 594, 1672
HhaI	GCGC	1 cut(s)	450
Hin1II	CATG	7 cut(s)	60, 224, 359, 393, 894, 905, 1247
Hin6I	GCGC	1 cut(s)	448
HinP1I	GCGC	1 cut(s)	448
HinfI	GANTC	5 cut(s)	386, 749, 1139, 1286, 1466
HpaII	CCGG	3 cut(s)	272, 594, 1672
HphI	GGTGA	2 cut(s)	917, 1289
Hpy166II	GTNNAC	3 cut(s)	1020, 1465, 1613
Hpy188I	TCNGA	3 cut(s)	754, 898, 1459
Hpy188III	TCNNGA	6 cut(s)	122, 455, 1010, 1059, 1106, 1442
Hpy8I	GTNNAC	3 cut(s)	1020, 1465, 1613
HpyF10VI	GCNNNNNNNGC	5 cut(s)	798, 1090, 1099, 1659, 1668
HpyF3I	CTNAG	2 cut(s)	1137, 1233
Hsp92II	CATG	7 cut(s)	60, 224, 359, 393, 894, 905, 1247
HspAI	GCGC	1 cut(s)	448
Kzo9I	GATC	2 cut(s)	457, 548
LmnI	GCTCC	4 cut(s)	192, 595, 1324, 1577
Lsp1109I	GCAGC	9 cut(s)	37, 157, 185, 346, 374, 1096, 1314, 1494, 1533
LweI	GCATC	3 cut(s)	342, 1080, 1111
MaeI	CTAG	3 cut(s)	177, 1010, 1073
MaeIII	GTNAC	7 cut(s)	383, 536, 643, 932, 1140, 1170, 1405
MalI	GATC	2 cut(s)	459, 550
MboI	GATC	2 cut(s)	457, 548
MboII	GAAGA	9 cut(s)	254, 359, 527, 583, 698, 748, 999, 1358, 1542
MflI	RGATCY	1 cut(s)	548
MhlI	GDGCHC	2 cut(s)	1239, 1441
MlsI	TGGCCA	2 cut(s)	722, 998
MluCI	AATT	7 cut(s)	199, 313, 417, 763, 778, 860, 1426
MluNI	TGGCCA	2 cut(s)	722, 998
MlyI	GAGTC	4 cut(s)	380, 1148, 1295, 1460
MmeI	TCCRAC	1 cut(s)	1275
Mox20I	TGGCCA	2 cut(s)	722, 998
Mph1103I	ATGCAT	2 cut(s)	357, 837
MroXI	GAANNNNTTC	2 cut(s)	249, 1302
MscI	TGGCCA	2 cut(s)	722, 998
MseI	TTAA	5 cut(s)	312, 420, 440, 495, 1368
MslI	CAYNNNNRTG	4 cut(s)	14, 1029, 1242, 1311
Msp20I	TGGCCA	2 cut(s)	722, 998
MspA1I	CMGCKG	2 cut(s)	654, 1147
MspI	CCGG	3 cut(s)	272, 594, 1672
MspR9I	CCNGG	5 cut(s)	432, 594, 1168, 1561, 1603
MvaI	CCWGG	4 cut(s)	432, 1168, 1561, 1603
MwoI	GCNNNNNNNGC	5 cut(s)	798, 1090, 1099, 1659, 1668
NciI	CCSGG	1 cut(s)	594
NdeI	CATATG	1 cut(s)	1210
NdeII	GATC	2 cut(s)	457, 548
NheI	GCTAGC	1 cut(s)	176
NlaIII	CATG	7 cut(s)	60, 224, 359, 393, 894, 905, 1247
NlaIV	GGNNCC	2 cut(s)	6, 1353
NmeAIII	GCCGAG	1 cut(s)	1309
NmuCI	GTSAC	3 cut(s)	383, 1140, 1405
NsiI	ATGCAT	2 cut(s)	357, 837
NspI	RCATGY	3 cut(s)	60, 359, 1247
PaeI	GCATGC	1 cut(s)	359
PceI	AGGCCT	1 cut(s)	1166
PdmI	GAANNNNTTC	2 cut(s)	249, 1302
PfeI	GAWTC	1 cut(s)	749
PflMI	CCANNNNNTGG	1 cut(s)	467
PfoI	TCCNGGA	1 cut(s)	430
PleI	GAGTC	4 cut(s)	380, 1147, 1294, 1460
PpsI	GAGTC	4 cut(s)	380, 1147, 1294, 1460
PpuMI	RGGWCCY	1 cut(s)	1351
PshBI	ATTAAT	2 cut(s)	420, 495
Psp124BI	GAGCTC	1 cut(s)	1441
Psp5II	RGGWCCY	1 cut(s)	1351
Psp6I	CCWGG	4 cut(s)	430, 1166, 1559, 1601
PspFI	CCCAGC	1 cut(s)	393
PspGI	CCWGG	4 cut(s)	430, 1166, 1559, 1601
PspN4I	GGNNCC	2 cut(s)	6, 1353
PspPI	GGNCC	5 cut(s)	4, 73, 428, 1351, 1605
PspPPI	RGGWCCY	1 cut(s)	1351
PstI	CTGCAG	2 cut(s)	175, 364
PstNI	CAGNNNCTG	2 cut(s)	104, 1646
PsuI	RGATCY	1 cut(s)	548
PvuII	CAGCTG	1 cut(s)	1147
RsaI	GTAC	6 cut(s)	46, 219, 412, 682, 1019, 1197
RsaNI	GTAC	6 cut(s)	45, 218, 411, 681, 1018, 1196
RseI	CAYNNNNRTG	4 cut(s)	14, 1029, 1242, 1311
SacI	GAGCTC	1 cut(s)	1441
SaqAI	TTAA	5 cut(s)	312, 420, 440, 495, 1368
Sau3AI	GATC	2 cut(s)	457, 548
Sau96I	GGNCC	5 cut(s)	4, 73, 428, 1351, 1605
ScaI	AGTACT	1 cut(s)	1197
SchI	GAGTC	4 cut(s)	380, 1148, 1295, 1460
ScrFI	CCNGG	5 cut(s)	432, 594, 1168, 1561, 1603
SduI	GDGCHC	2 cut(s)	1239, 1441
SfaNI	GCATC	3 cut(s)	342, 1080, 1111
SfcI	CTRYAG	4 cut(s)	147, 171, 360, 609
SinI	GGWCC	4 cut(s)	4, 428, 1351, 1605
SmiMI	CAYNNNNRTG	4 cut(s)	14, 1029, 1242, 1311
SmlI	CTYRAG	1 cut(s)	1106
SmoI	CTYRAG	1 cut(s)	1106
SphI	GCATGC	1 cut(s)	359
Sse9I	AATT	7 cut(s)	199, 313, 417, 763, 778, 860, 1426
SseBI	AGGCCT	1 cut(s)	1166
SsiI	CCGC	4 cut(s)	53, 190, 652, 937
SspI	AATATT	2 cut(s)	530, 1585
SspMI	CTAG	3 cut(s)	177, 1010, 1073
SstI	GAGCTC	1 cut(s)	1441
StuI	AGGCCT	1 cut(s)	1166
StyD4I	CCNGG	5 cut(s)	430, 592, 1166, 1559, 1601
StyI	CCWWGG	1 cut(s)	823
TaqI	TCGA	1 cut(s)	1435
TasI	AATT	7 cut(s)	199, 313, 417, 763, 778, 860, 1426
TatI	WGTACW	4 cut(s)	44, 217, 680, 1195
TauI	GCSGC	2 cut(s)	56, 654
TfiI	GAWTC	1 cut(s)	749
Tru1I	TTAA	5 cut(s)	312, 420, 440, 495, 1368
Tru9I	TTAA	5 cut(s)	312, 420, 440, 495, 1368
TscAI	CASTG	6 cut(s)	94, 156, 723, 748, 1133, 1651
TseFI	GTSAC	3 cut(s)	383, 1140, 1405
TseI	GCWGC	9 cut(s)	50, 170, 173, 359, 362, 1084, 1327, 1482, 1521
Tsp45I	GTSAC	3 cut(s)	383, 1140, 1405
TspGWI	ACGGA	1 cut(s)	4
TspRI	CASTG	6 cut(s)	94, 156, 723, 748, 1133, 1651
Van91I	CCANNNNNTGG	1 cut(s)	467
VpaK11BI	GGWCC	4 cut(s)	4, 428, 1351, 1605
VspI	ATTAAT	2 cut(s)	420, 495
XapI	RAATTY	2 cut(s)	860, 1426
XbaI	TCTAGA	1 cut(s)	1009
XceI	RCATGY	3 cut(s)	60, 359, 1247
XmnI	GAANNNNTTC	2 cut(s)	249, 1302
XspI	CTAG	3 cut(s)	177, 1010, 1073
ZrmI	AGTACT	1 cut(s)	1197
Zsp2I	ATGCAT	2 cut(s)	357, 837

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.