Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007866

Physical Location & Seq

Genomic Coordinates Reverse (-)

59527939 .. 59535712

Gene Structure 7774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51222

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCGACGATGCCGAGCCACGGCCTGAGGCACGTGACCACGGTTCGCCCGTGGCTGCGGAATTTCCGAAGCGCGACGACGCTGGCGGCTCTGCCGTCTTCGCCTTCGGCCGAAGATTCGGAGCGGGCCGAGTCCAAGGAGAAGCCCAAGCCCAAGCCCAGCTCGTATTTCCCGAAGCGAGGGCAGAGTTTGGAGCTGGTGTGTGAGTCTTTGGCTTTCAAAGGGAAGGGTCTGTGTAAGGTTTCGGAGACCGGGTTCGTTGTCATGTGCGACCGGGCTTTGCCTGGGGAGCGGTTCATTGGGCGCGTGACTCGCAAGAAAGGGACCTATGCTGAGGTGACAAAGGTACAGACACTATCTCCTCATTGGGATTTCGTGGATGCTCCTTGTGAGTATGCTTCTTACTGTGGAGGATGTAAAACGCAAAGTTTGTCCTATGAGGCGCAAATCAGAGCTAAGGAGCACCAAGTTCGTGAGTTGATGATAAATTTTGGAAAGGTTTCTCCTACAGAGCTGGAAAGCATCATGAAGCCCATTGTTCCCTGTGACATCCAGTTCCGTTACAGGAATAAGATGGAGTTCTCATTTGGTTCTCAAAAATGGTTACCTAAAGAATCATTACACGAGAGACAAGATGGAATTGAGAATTATGCCTTGGGTCTGCATGCTCCTGGCTTTTTTGATAAGGTTCTAAATGTTGACAAGTGCTTATTGCAAAGTGAGCCTGCCGAAATGGTTCTTGCCGCCGTACAACAAAGTTGGAGAGATCCACAATTAGGTCTCTCTCCTTTTGATGTTTACTCTCATGCCGGATTTCTTAAGCATCTAATGCTAAGAACTGGAAGGAATGTGAAGACCGGTCTTCCTGAACTTATGGTTAATTTTGTGACCTCATCTTACAAGCCAGAGCTACTTAAGCCTCTTCTTCAAAGGATAACAGCTATCCCCGAAGTGGTAAGCGTCATGAACAATGTAAATACGTCTGTTGGTAACACGTCTCTTGGGGAGGTTGAGTACACTTTGTATGGAAAGTCTAGCATAACAGAGACCTTACGAGGGCTCACCTTTCAAATATCAGCAAACTCATTCTTCCAAACAAATACTCACCAGGCAGAGATTTTATATAAACTCATAGAAGATTGTGCTGGTCTCAGAGGAGAGGGCTCAGAGATTGTTCTTGACCTGTTTTGTGGGACTGGCACCATTGGTCTGACACTTGCCAGAAGGGCCAAACATGTTTATGGCTATGAAATAATTCCTCAGGCCATTGCAGATGCTTGTCTGAATGCTGAGCTGAATGGTATCCGTAACGCTACATTTGTCCAAGGGGATCTTAACAAAATTGATGAGAGTTTTGGGAACAATTTTCCTAAGCCTGAAATCGTTATTTCAGATCCCAATCGTCCAGGAATGCACATGAAGTTGATTAAGTTTCTTCTAAAGCTGAAGGCTTCACGCATTGTTTATGTATCATGTAACCCTGCCACATGTGCACGTGACCTTGATTATCTCTGCAATGGTGTGGTAGAGAAAAACATAAAAGGCTGTTACAAGCTAAAGAGTGTGCAACCAGTAGACATGTTTCCGCACACTCCTCATATTGAGTGTGTTTGCCTCTTGGAGCTTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_U5-meth_tr

Protein Analysis

543

Amino Acids

60.59

Weight (kDa)

8.51

Isoelectric Point (pI)

41.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_U5-meth_tr	PF05958	352 - 541	1.1e-15	tRNA (Uracil-5-)-methyltransferase
Methyltransf_31	PF13847	391 - 452	8.4e-12	Methyltransferase domain
Methyltransf_25	PF13649	392 - 449	2.9e-07	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21300
fragaria_vesca	FvH4_6g32800 FvH4_6g32800 FvH4_6g32800 FvH4_6g32800 FvH4_6g32800 FvH4_6g32800 FvH4_6g32800 FvH4_6g32800 FvH4_6g32800
malus_domestica	MD17G1179000.v1.1
prunus_persica	Prupe.3G054000_v2.0.a1
pyrus_communis	pycom17g18800
rosa_chinensis	RchiOBHm_Chr2g0141991
rosa_laevigata	RLG00000019944
rosa_multiflora	Rmu_sc0004757.1_g000012
rosa_roxburghii	Rroxscaffold_2G00103680
rosa_rugosa	Rorug02G0369500 Rorug02G0369500
rosa_samantha	Rh2AG422200 Rh2BG432300 Rh2CG409200 Rh2DG442100
rosa_wichuraiana	Rw2G034590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1199
AccBSI	CCGCTC	2 cut(s)	124, 292
AccI	GTMKAC	1 cut(s)	1575
AccII	CGCG	2 cut(s)	74, 306
AciI	CCGC	6 cut(s)	58, 86, 124, 292, 744, 1586
AclWI	GGATC	3 cut(s)	761, 1338, 1388
AcoI	YGGCCR	1 cut(s)	108
AcsI	RAATTY	2 cut(s)	61, 487
AcuI	CTGAAG	1 cut(s)	1466
AcvI	CACGTG	2 cut(s)	34, 1496
AfaI	GTAC	3 cut(s)	348, 750, 1016
AfiI	CCNNNNNNNGG	5 cut(s)	20, 179, 776, 952, 1056
AflII	CTTAAG	2 cut(s)	818, 914
AflIII	ACRYGT	4 cut(s)	993, 1234, 1487, 1578
AgeI	ACCGGT	1 cut(s)	857
AgsI	TTSAA	3 cut(s)	220, 929, 1070
AjiI	CACGTC	1 cut(s)	996
AjnI	CCWGG	4 cut(s)	283, 670, 1107, 1405
AjuI	GAANNNNNNNTTGG	2 cut(s)	638, 670
AloI	GAACNNNNNNTCC	2 cut(s)	239, 271
Alw21I	GWGCWC	2 cut(s)	465, 1495
Alw26I	GTCTC	6 cut(s)	242, 622, 785, 1002, 1040, 1154
Alw44I	GTGCAC	1 cut(s)	1491
AlwI	GGATC	3 cut(s)	761, 1338, 1388
AoxI	GGCC	5 cut(s)	22, 108, 126, 1227, 1263
ApaLI	GTGCAC	1 cut(s)	1491
ApeKI	GCWGC	1 cut(s)	55
ApoI	RAATTY	2 cut(s)	61, 487
AsiGI	ACCGGT	1 cut(s)	857
Asp700I	GAANNNNTTC	3 cut(s)	499, 735, 1254
AspLEI	GCGC	3 cut(s)	74, 306, 445
AspS9I	GGNCC	3 cut(s)	126, 324, 1227
AsuC2I	CCSGG	2 cut(s)	253, 275
AsuHPI	GGTGA	3 cut(s)	349, 1054, 1097
AvaII	GGWCC	1 cut(s)	324
AxyI	CCTNAGG	2 cut(s)	26, 1260
BaeGI	GKGCMC	1 cut(s)	1495
BanI	GGYRCC	1 cut(s)	1199
BanII	GRGCYC	2 cut(s)	1062, 1166
BauI	CACGAG	1 cut(s)	623
BbrPI	CACGTG	2 cut(s)	34, 1496
BbsI	GAAGAC	3 cut(s)	90, 854, 860
Bbv12I	GWGCWC	2 cut(s)	465, 1495
BbvCI	CCTCAGC	1 cut(s)	333
BbvI	GCAGC	1 cut(s)	42
BccI	CCATC	2 cut(s)	568, 629
BceAI	ACGGC	3 cut(s)	37, 79, 731
BcgI	CGANNNNNNTGC	2 cut(s)	452, 486
BciT130I	CCWGG	4 cut(s)	285, 672, 1109, 1407
BciVI	GTATCC	1 cut(s)	1313
BcnI	CCSGG	2 cut(s)	253, 275
BcoDI	GTCTC	6 cut(s)	242, 622, 785, 1002, 1040, 1154
BfaI	CTAG	1 cut(s)	1035
BfmI	CTRYAG	1 cut(s)	507
BfrI	CTTAAG	2 cut(s)	818, 914
BfuI	GTATCC	1 cut(s)	1313
BglI	GCCNNNNNGGC	1 cut(s)	1226
BisI	GCNGC	3 cut(s)	56, 87, 744
BlpI	GCTNAGC	1 cut(s)	1290
BlsI	GCNGC	3 cut(s)	57, 88, 745
Bme1390I	CCNGG	6 cut(s)	253, 275, 285, 672, 1109, 1407
Bme18I	GGWCC	1 cut(s)	324
BmgBI	CACGTC	1 cut(s)	996
BmgT120I	GGNCC	3 cut(s)	126, 324, 1227
BmiI	GGNNCC	2 cut(s)	325, 1201
BmrFI	CCNGG	6 cut(s)	253, 275, 285, 672, 1109, 1407
BmsI	GCATC	4 cut(s)	370, 531, 832, 1264
BpiI	GAAGAC	3 cut(s)	90, 854, 860
Bpu10I	CCTNAGC	3 cut(s)	333, 456, 1371
Bpu1102I	GCTNAGC	1 cut(s)	1290
BpuMI	CCSGG	2 cut(s)	253, 275
BsaAI	YACGTR	2 cut(s)	34, 1496
BsaBI	GATNNNNATC	1 cut(s)	1398
BsaI	GGTCTC	4 cut(s)	242, 785, 1040, 1154
BsaJI	CCNNGG	7 cut(s)	19, 39, 50, 135, 284, 654, 1324
BsaWI	WCCGGW	1 cut(s)	857
BsaXI	ACNNNNNCTCC	8 cut(s)	185, 215, 239, 269, 343, 373, 998, 1028
Bsc4I	CCNNNNNNNGG	5 cut(s)	20, 179, 776, 952, 1056
Bse118I	RCCGGY	1 cut(s)	857
Bse1I	ACTGG	4 cut(s)	553, 844, 1201, 1571
Bse21I	CCTNAGG	2 cut(s)	26, 1260
Bse3DI	GCAATG	2 cut(s)	1266, 1522
Bse8I	GATNNNNATC	1 cut(s)	1398
BseBI	CCWGG	4 cut(s)	285, 672, 1109, 1407
BseDI	CCNNGG	7 cut(s)	19, 39, 50, 135, 284, 654, 1324
BseGI	GGATG	3 cut(s)	385, 419, 549
BseJI	GATNNNNATC	1 cut(s)	1398
BseLI	CCNNNNNNNGG	5 cut(s)	20, 179, 776, 952, 1056
BseMI	GCAATG	2 cut(s)	1266, 1522
BseMII	CTCAG	6 cut(s)	17, 324, 1165, 1179, 1274, 1281
BseNI	ACTGG	4 cut(s)	553, 844, 1201, 1571
BseRI	GAGGAG	3 cut(s)	351, 1170, 1584
BseSI	GKGCMC	1 cut(s)	1495
BseX3I	CGGCCG	1 cut(s)	108
BseXI	GCAGC	1 cut(s)	42
BseYI	CCCAGC	1 cut(s)	158
Bsh1236I	CGCG	2 cut(s)	74, 306
Bsh1285I	CGRYCG	2 cut(s)	111, 274
BshFI	GGCC	5 cut(s)	24, 110, 128, 1229, 1265
BshNI	GGYRCC	1 cut(s)	1199
BshTI	ACCGGT	1 cut(s)	857
BsiEI	CGRYCG	2 cut(s)	111, 274
BsiHKAI	GWGCWC	2 cut(s)	465, 1495
BsiSI	CCGG	4 cut(s)	252, 274, 810, 858
BslFI	GGGAC	2 cut(s)	337, 1207
BslI	CCNNNNNNNGG	5 cut(s)	20, 179, 776, 952, 1056
BsmAI	GTCTC	6 cut(s)	242, 622, 785, 1002, 1040, 1154
BsmBI	CGTCTC	1 cut(s)	1002
BsmFI	GGGAC	2 cut(s)	337, 1207
BsmI	GAATGC	2 cut(s)	1291, 1416
BsnI	GGCC	5 cut(s)	24, 110, 128, 1229, 1265
Bso31I	GGTCTC	4 cut(s)	242, 785, 1040, 1154
Bsp1286I	GDGCHC	4 cut(s)	465, 1062, 1166, 1495
Bsp143I	GATC	3 cut(s)	766, 1330, 1393
Bsp1720I	GCTNAGC	1 cut(s)	1290
BspACI	CCGC	6 cut(s)	58, 86, 124, 292, 744, 1586
BspANI	GGCC	5 cut(s)	24, 110, 128, 1229, 1265
BspCNI	CTCAG	6 cut(s)	18, 325, 1164, 1178, 1273, 1282
BspFNI	CGCG	2 cut(s)	74, 306
BspHI	TCATGA	2 cut(s)	525, 963
BspLI	GGNNCC	2 cut(s)	325, 1201
BspPI	GGATC	3 cut(s)	761, 1338, 1388
BspT107I	GGYRCC	1 cut(s)	1199
BspTI	CTTAAG	2 cut(s)	818, 914
BspTNI	GGTCTC	4 cut(s)	242, 785, 1040, 1154
BsrBI	CCGCTC	2 cut(s)	124, 292
BsrDI	GCAATG	2 cut(s)	1266, 1522
BsrFI	RCCGGY	1 cut(s)	857
BsrI	ACTGG	4 cut(s)	553, 844, 1201, 1571
BssAI	RCCGGY	1 cut(s)	857
BssECI	CCNNGG	7 cut(s)	19, 39, 50, 135, 284, 654, 1324
BssMI	GATC	3 cut(s)	766, 1330, 1393
BssSI	CACGAG	1 cut(s)	623
BssT1I	CCWWGG	3 cut(s)	135, 654, 1324
Bst2BI	CACGAG	1 cut(s)	623
Bst2UI	CCWGG	4 cut(s)	285, 672, 1109, 1407
Bst4CI	ACNGT	2 cut(s)	43, 407
Bst6I	CTCTTC	1 cut(s)	927
BstAFI	CTTAAG	2 cut(s)	818, 914
BstAPI	GCANNNNNTGC	1 cut(s)	829
BstBAI	YACGTR	2 cut(s)	34, 1496
BstC8I	GCNNGC	4 cut(s)	84, 126, 666, 726
BstDEI	CTNAG	9 cut(s)	26, 333, 456, 833, 1151, 1165, 1260, 1290, 1371
BstDSI	CCRYGG	3 cut(s)	19, 39, 50
BstEII	GGTNACC	1 cut(s)	603
BstF5I	GGATG	3 cut(s)	385, 419, 549
BstFNI	CGCG	2 cut(s)	74, 306
BstHHI	GCGC	3 cut(s)	74, 306, 445
BstKTI	GATC	3 cut(s)	769, 1333, 1396
BstMAI	GTCTC	6 cut(s)	242, 622, 785, 1002, 1040, 1154
BstMBI	GATC	3 cut(s)	766, 1330, 1393
BstMCI	CGRYCG	2 cut(s)	111, 274
BstMWI	GCNNNNNNNGC	8 cut(s)	100, 289, 312, 721, 829, 916, 1226, 1490
BstNI	CCWGG	4 cut(s)	285, 672, 1109, 1407
BstNSI	RCATGY	4 cut(s)	668, 1238, 1491, 1582
BstPI	GGTNACC	1 cut(s)	603
BstSCI	CCNGG	6 cut(s)	251, 273, 283, 670, 1107, 1405
BstSFI	CTRYAG	1 cut(s)	507
BstSLI	GKGCMC	1 cut(s)	1495
BstUI	CGCG	2 cut(s)	74, 306
BstV1I	GCAGC	1 cut(s)	42
BstV2I	GAAGAC	3 cut(s)	90, 854, 860
BstX2I	RGATCY	3 cut(s)	766, 1330, 1393
BstYI	RGATCY	3 cut(s)	766, 1330, 1393
BstZI	CGGCCG	1 cut(s)	108
Bsu36I	CCTNAGG	2 cut(s)	26, 1260
BsuI	GTATCC	1 cut(s)	1313
BsuRI	GGCC	5 cut(s)	24, 110, 128, 1229, 1265
BtgI	CCRYGG	3 cut(s)	19, 39, 50
BtrI	CACGTC	1 cut(s)	996
BtsCI	GGATG	3 cut(s)	385, 419, 549
Cac8I	GCNNGC	4 cut(s)	84, 126, 666, 726
CciI	TCATGA	2 cut(s)	525, 963
CfoI	GCGC	3 cut(s)	74, 306, 445
Cfr10I	RCCGGY	1 cut(s)	857
Cfr13I	GGNCC	3 cut(s)	126, 324, 1227
CseI	GACGC	2 cut(s)	88, 949
Csp6I	GTAC	3 cut(s)	347, 749, 1015
CspAI	ACCGGT	1 cut(s)	857
CviQI	GTAC	3 cut(s)	347, 749, 1015
DdeI	CTNAG	9 cut(s)	26, 333, 456, 833, 1151, 1165, 1260, 1290, 1371
DpnI	GATC	3 cut(s)	768, 1332, 1395
DpnII	GATC	3 cut(s)	766, 1330, 1393
EaeI	YGGCCR	1 cut(s)	108
EagI	CGGCCG	1 cut(s)	108
Eam1104I	CTCTTC	1 cut(s)	927
EarI	CTCTTC	1 cut(s)	927
EclXI	CGGCCG	1 cut(s)	108
Eco130I	CCWWGG	3 cut(s)	135, 654, 1324
Eco24I	GRGCYC	2 cut(s)	1062, 1166
Eco31I	GGTCTC	4 cut(s)	242, 785, 1040, 1154
Eco47I	GGWCC	1 cut(s)	324
Eco52I	CGGCCG	1 cut(s)	108
Eco57I	CTGAAG	1 cut(s)	1466
Eco72I	CACGTG	2 cut(s)	34, 1496
Eco81I	CCTNAGG	2 cut(s)	26, 1260
Eco91I	GGTNACC	1 cut(s)	603
EcoO109I	RGGNCCY	1 cut(s)	324
EcoO65I	GGTNACC	1 cut(s)	603
EcoRII	CCWGG	4 cut(s)	283, 670, 1107, 1405
EcoT14I	CCWWGG	3 cut(s)	135, 654, 1324
EcoT38I	GRGCYC	2 cut(s)	1062, 1166
ErhI	CCWWGG	3 cut(s)	135, 654, 1324
Esp3I	CGTCTC	1 cut(s)	1002
FalI	AAGNNNNNCTT	2 cut(s)	1317, 1349
FaqI	GGGAC	2 cut(s)	337, 1207
FauI	CCCGC	1 cut(s)	117
FblI	GTMKAC	1 cut(s)	1575
Fnu4HI	GCNGC	3 cut(s)	56, 87, 744
FokI	GGATG	3 cut(s)	392, 426, 536
FriOI	GRGCYC	2 cut(s)	1062, 1166
Fsp4HI	GCNGC	3 cut(s)	56, 87, 744
FspBI	CTAG	1 cut(s)	1035
GlaI	GCGC	3 cut(s)	73, 305, 444
GluI	GCNGC	3 cut(s)	56, 87, 744
GsaI	CCCAGC	1 cut(s)	162
HaeIII	GGCC	5 cut(s)	24, 110, 128, 1229, 1265
HapII	CCGG	4 cut(s)	252, 274, 810, 858
HgaI	GACGC	2 cut(s)	88, 949
HhaI	GCGC	3 cut(s)	74, 306, 445
Hin6I	GCGC	3 cut(s)	72, 304, 443
HinP1I	GCGC	3 cut(s)	72, 304, 443
HincII	GTYRAC	1 cut(s)	700
HindII	GTYRAC	1 cut(s)	700
HinfI	GANTC	5 cut(s)	116, 131, 206, 310, 614
HpaII	CCGG	4 cut(s)	252, 274, 810, 858
HphI	GGTGA	3 cut(s)	349, 1054, 1097
Hpy166II	GTNNAC	5 cut(s)	700, 799, 1017, 1493, 1576
Hpy188I	TCNGA	9 cut(s)	68, 121, 247, 452, 1154, 1168, 1212, 1284, 1393
Hpy188III	TCNNGA	6 cut(s)	172, 473, 526, 866, 964, 1178
Hpy8I	GTNNAC	5 cut(s)	700, 799, 1017, 1493, 1576
Hpy99I	CGWCG	3 cut(s)	10, 79, 82
HpyAV	CCTTC	5 cut(s)	114, 220, 837, 1218, 1441
HpyCH4III	ACNGT	2 cut(s)	43, 407
HpyCH4IV	ACGT	4 cut(s)	33, 980, 995, 1495
HpyCH4V	TGCA	7 cut(s)	664, 715, 1271, 1414, 1493, 1515, 1567
HpyF10VI	GCNNNNNNNGC	8 cut(s)	100, 289, 312, 721, 829, 916, 1226, 1490
HpyF3I	CTNAG	9 cut(s)	26, 333, 456, 833, 1151, 1165, 1260, 1290, 1371
HpySE526I	ACGT	4 cut(s)	33, 980, 995, 1495
HspAI	GCGC	3 cut(s)	72, 304, 443
Kzo9I	GATC	3 cut(s)	766, 1330, 1393
LmnI	GCTCC	7 cut(s)	121, 193, 289, 388, 460, 673, 1621
Lsp1109I	GCAGC	1 cut(s)	42
LweI	GCATC	4 cut(s)	370, 531, 832, 1264
MaeI	CTAG	1 cut(s)	1035
MaeII	ACGT	4 cut(s)	33, 980, 995, 1495
MalI	GATC	3 cut(s)	768, 1332, 1395
MbiI	CCGCTC	2 cut(s)	124, 292
MboI	GATC	3 cut(s)	766, 1330, 1393
MboII	GAAGA	9 cut(s)	90, 125, 854, 865, 914, 917, 1081, 1148, 1427
MflI	RGATCY	3 cut(s)	766, 1330, 1393
MhlI	GDGCHC	4 cut(s)	465, 1062, 1166, 1495
MluCI	AATT	9 cut(s)	61, 487, 639, 646, 773, 880, 1254, 1341, 1363
MlyI	GAGTC	3 cut(s)	140, 215, 304
MmeI	TCCRAC	1 cut(s)	740
MroXI	GAANNNNTTC	3 cut(s)	499, 735, 1254
MseI	TTAA	5 cut(s)	819, 879, 915, 1335, 1428
MslI	CAYNNNNRTG	1 cut(s)	1239
MspCI	CTTAAG	2 cut(s)	818, 914
MspI	CCGG	4 cut(s)	252, 274, 810, 858
MspR9I	CCNGG	6 cut(s)	253, 275, 285, 672, 1109, 1407
Mva1269I	GAATGC	2 cut(s)	1291, 1416
MvaI	CCWGG	4 cut(s)	285, 672, 1109, 1407
MvnI	CGCG	2 cut(s)	74, 306
MwoI	GCNNNNNNNGC	8 cut(s)	100, 289, 312, 721, 829, 916, 1226, 1490
NciI	CCSGG	2 cut(s)	253, 275
NdeII	GATC	3 cut(s)	766, 1330, 1393
NlaIV	GGNNCC	2 cut(s)	325, 1201
NmeAIII	GCCGAG	2 cut(s)	39, 154
NmuCI	GTSAC	6 cut(s)	34, 307, 337, 545, 886, 1496
NspI	RCATGY	4 cut(s)	668, 1238, 1491, 1582
PaeI	GCATGC	1 cut(s)	668
PagI	TCATGA	2 cut(s)	525, 963
PciI	ACATGT	3 cut(s)	1234, 1487, 1578
PcsI	WCGNNNNNNNCGW	2 cut(s)	47, 170
PctI	GAATGC	2 cut(s)	1291, 1416
PdmI	GAANNNNTTC	3 cut(s)	499, 735, 1254
PfeI	GAWTC	2 cut(s)	116, 614
PfoI	TCCNGGA	1 cut(s)	1405
PinAI	ACCGGT	1 cut(s)	857
PkrI	GCNGC	3 cut(s)	57, 88, 745
PleI	GAGTC	3 cut(s)	139, 214, 304
PmaCI	CACGTG	2 cut(s)	34, 1496
PmlI	CACGTG	2 cut(s)	34, 1496
PpsI	GAGTC	3 cut(s)	139, 214, 304
Ppu21I	YACGTR	2 cut(s)	34, 1496
PpuMI	RGGWCCY	1 cut(s)	324
PscI	ACATGT	3 cut(s)	1234, 1487, 1578
Psp5II	RGGWCCY	1 cut(s)	324
Psp6I	CCWGG	4 cut(s)	283, 670, 1107, 1405
PspCI	CACGTG	2 cut(s)	34, 1496
PspEI	GGTNACC	1 cut(s)	603
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	4 cut(s)	283, 670, 1107, 1405
PspN4I	GGNNCC	2 cut(s)	325, 1201
PspPI	GGNCC	3 cut(s)	126, 324, 1227
PspPPI	RGGWCCY	1 cut(s)	324
PsuI	RGATCY	3 cut(s)	766, 1330, 1393
RsaI	GTAC	3 cut(s)	348, 750, 1016
RsaNI	GTAC	3 cut(s)	347, 749, 1015
RseI	CAYNNNNRTG	1 cut(s)	1239
SaqAI	TTAA	5 cut(s)	819, 879, 915, 1335, 1428
SatI	GCNGC	3 cut(s)	56, 87, 744
Sau3AI	GATC	3 cut(s)	766, 1330, 1393
Sau96I	GGNCC	3 cut(s)	126, 324, 1227
SchI	GAGTC	3 cut(s)	140, 215, 304
ScrFI	CCNGG	6 cut(s)	253, 275, 285, 672, 1109, 1407
SduI	GDGCHC	4 cut(s)	465, 1062, 1166, 1495
SfaNI	GCATC	4 cut(s)	370, 531, 832, 1264
SfcI	CTRYAG	1 cut(s)	507
SinI	GGWCC	1 cut(s)	324
SmiMI	CAYNNNNRTG	1 cut(s)	1239
SmlI	CTYRAG	2 cut(s)	818, 914
SmoI	CTYRAG	2 cut(s)	818, 914
SphI	GCATGC	1 cut(s)	668
Sse9I	AATT	9 cut(s)	61, 487, 639, 646, 773, 880, 1254, 1341, 1363
SsiI	CCGC	6 cut(s)	58, 86, 124, 292, 744, 1586
SspMI	CTAG	1 cut(s)	1035
StyD4I	CCNGG	6 cut(s)	251, 273, 283, 670, 1107, 1405
StyI	CCWWGG	3 cut(s)	135, 654, 1324
TaaI	ACNGT	2 cut(s)	43, 407
TaiI	ACGT	4 cut(s)	36, 983, 998, 1498
TasI	AATT	9 cut(s)	61, 487, 639, 646, 773, 880, 1254, 1341, 1363
TatI	WGTACW	1 cut(s)	1014
TauI	GCSGC	2 cut(s)	89, 746
TfiI	GAWTC	2 cut(s)	116, 614
Tru1I	TTAA	5 cut(s)	819, 879, 915, 1335, 1428
Tru9I	TTAA	5 cut(s)	819, 879, 915, 1335, 1428
TseFI	GTSAC	6 cut(s)	34, 307, 337, 545, 886, 1496
TseI	GCWGC	1 cut(s)	55
Tsp45I	GTSAC	6 cut(s)	34, 307, 337, 545, 886, 1496
TspDTI	ATGAA	5 cut(s)	286, 542, 980, 1263, 1433
TspGWI	ACGGA	2 cut(s)	548, 1295
Vha464I	CTTAAG	2 cut(s)	818, 914
VneI	GTGCAC	1 cut(s)	1491
VpaK11BI	GGWCC	1 cut(s)	324
XapI	RAATTY	2 cut(s)	61, 487
XceI	RCATGY	4 cut(s)	668, 1238, 1491, 1582
XmiI	GTMKAC	1 cut(s)	1575
XmnI	GAANNNNTTC	3 cut(s)	499, 735, 1254
XspI	CTAG	1 cut(s)	1035

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.