RchiOBHm_Chr2g0169901

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
84016340 .. 84016540
201 bp
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UTR
Exon/CDS
Intron
PRQ53746

Sequence Viewer

Length: 156 bp
ATGGAATCTAGGTTCTGGACTTTTGTGGACATGGCCAGTGGCTGGGTTGAGTTTCCACCATGTACATGTATAGCGCGTTGCTTCTTGGAGGAAGAGGAGAAATCTGGTTTTACTGGTGAAGGGAAATCTTGTTTGATGGTTTGGGTGGTGGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

5.81

Weight (kDa)

4.43

Isoelectric Point (pI)

50.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 42
AccII CGCG 1 cut(s) 76
AcoI YGGCCR 1 cut(s) 33
AfaI GTAC 1 cut(s) 64
AfiI CCNNNNNNNGG 1 cut(s) 42
AflIII ACRYGT 1 cut(s) 65
AloI GAACNNNNNNTCC 1 cut(s) 28
AlwNI CAGNNNCTG 1 cut(s) 42
AoxI GGCC 1 cut(s) 33
AspLEI GCGC 1 cut(s) 76
AsuHPI GGTGA 1 cut(s) 128
BalI TGGCCA 1 cut(s) 35
BccI CCATC 1 cut(s) 130
BfaI CTAG 1 cut(s) 9
Bsc4I CCNNNNNNNGG 1 cut(s) 42
Bse1I ACTGG 2 cut(s) 36, 118
BseLI CCNNNNNNNGG 1 cut(s) 42
BseNI ACTGG 2 cut(s) 36, 118
BseRI GAGGAG 1 cut(s) 110
BseYI CCCAGC 1 cut(s) 42
Bsh1236I CGCG 1 cut(s) 76
BshFI GGCC 1 cut(s) 35
BslI CCNNNNNNNGG 1 cut(s) 42
BsnI GGCC 1 cut(s) 35
Bsp1407I TGTACA 1 cut(s) 62
BspANI GGCC 1 cut(s) 35
BspFNI CGCG 1 cut(s) 76
BsrGI TGTACA 1 cut(s) 62
BsrI ACTGG 2 cut(s) 36, 118
Bst6I CTCTTC 1 cut(s) 87
BstAUI TGTACA 1 cut(s) 62
BstFNI CGCG 1 cut(s) 76
BstHHI GCGC 1 cut(s) 76
BstNSI RCATGY 1 cut(s) 69
BstUI CGCG 1 cut(s) 76
BsuRI GGCC 1 cut(s) 35
BtsIMutI CAGTG 1 cut(s) 43
CaiI CAGNNNCTG 1 cut(s) 42
CfoI GCGC 1 cut(s) 76
Csp6I GTAC 1 cut(s) 63
CviAII CATG 3 cut(s) 31, 60, 66
CviJI RGCY 2 cut(s) 35, 42
CviKI_1 RGCY 2 cut(s) 35, 42
CviQI GTAC 1 cut(s) 63
EaeI YGGCCR 1 cut(s) 33
Eam1104I CTCTTC 1 cut(s) 87
EarI CTCTTC 1 cut(s) 87
FaeI CATG 3 cut(s) 34, 63, 69
FaiI YATR 4 cut(s) 32, 61, 67, 71
FatI CATG 3 cut(s) 30, 59, 65
FspBI CTAG 1 cut(s) 9
GlaI GCGC 1 cut(s) 75
GsaI CCCAGC 1 cut(s) 46
HaeIII GGCC 1 cut(s) 35
HhaI GCGC 1 cut(s) 76
Hin1II CATG 3 cut(s) 34, 63, 69
Hin6I GCGC 1 cut(s) 74
HinP1I GCGC 1 cut(s) 74
HinfI GANTC 1 cut(s) 5
HphI GGTGA 1 cut(s) 128
Hpy166II GTNNAC 1 cut(s) 28
Hpy188III TCNNGA 1 cut(s) 16
Hpy8I GTNNAC 1 cut(s) 28
HpyAV CCTTC 1 cut(s) 113
Hsp92II CATG 3 cut(s) 34, 63, 69
HspAI GCGC 1 cut(s) 74
LpnPI CCDG 4 cut(s) 28, 49, 90, 99
MaeI CTAG 1 cut(s) 9
MboII GAAGA 1 cut(s) 104
MlsI TGGCCA 1 cut(s) 35
MluNI TGGCCA 1 cut(s) 35
MnlI CCTC 2 cut(s) 82, 88
Mox20I TGGCCA 1 cut(s) 35
MscI TGGCCA 1 cut(s) 35
MslI CAYNNNNRTG 1 cut(s) 64
Msp20I TGGCCA 1 cut(s) 35
MvnI CGCG 1 cut(s) 76
NlaIII CATG 3 cut(s) 34, 63, 69
NspI RCATGY 1 cut(s) 69
PciI ACATGT 1 cut(s) 65
PfeI GAWTC 1 cut(s) 5
PflMI CCANNNNNTGG 1 cut(s) 42
PscI ACATGT 1 cut(s) 65
PspFI CCCAGC 1 cut(s) 42
PstNI CAGNNNCTG 1 cut(s) 42
RsaI GTAC 1 cut(s) 64
RsaNI GTAC 1 cut(s) 63
RseI CAYNNNNRTG 1 cut(s) 64
SetI ASST 1 cut(s) 14
SmiMI CAYNNNNRTG 1 cut(s) 64
SspMI CTAG 1 cut(s) 9
TatI WGTACW 1 cut(s) 62
TfiI GAWTC 1 cut(s) 5
TscAI CASTG 1 cut(s) 43
TspRI CASTG 1 cut(s) 43
Van91I CCANNNNNTGG 1 cut(s) 42
XceI RCATGY 1 cut(s) 69
XspI CTAG 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.