RchiOBHm_Chr2g0173131

Protein kinase PVPK-1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0007009
Physical Location & Seq
Forward (+)
86255425 .. 86259281
3857 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54037

Sequence Viewer

Length: 2058 bp
ATGGATTCACTGTCTGACGGGGTCGTTTCTGTTCCAAAGGCTCGCTATTCGGCACCTGAGGGAGGCAACAACCCTAGTTCGACACCTGGGACTTCTCGTCCCTCTCAGCCTCCATCTCCGAAACAATTGAGAAGTGAAGTGGCTTCATCCACATCCAGTGTGGCTGCTCATGCTTATGAAGTGAAGACAGTAGGATATTCAAATGGTTCTGTAATTAATCCCAACAAGGTACCTAACCATGGCGCGCTGCAGGAAGATTTGCTCAGTATGGGGAAACGGTATCAGAGTTCAAATAAAGGCAAAGTTGAACATGGAGGCCCGAATGATGTTCTTGATAAACCAGCCGAAACCTCATTTCAGAACAAGGTTTCTATGGTGGAAGTAAAATCTTCCATCCAGCATCCTGTTGATGATTCTGAGGAATTTGATTCAAGCAGCTTACCAGAATCTAGGAATTATGTTTTAGGTCCAGGTAAAGAAGTTGCTGGACGGAAAAATGGCCACTTAGTTTCTCATTCTGGAGTAGGGACTGCCTTCTGTCCAAGCCCTCAGAACAGTTTATATTCTGCTGCCCCCACTCTCTATTGTGAAGCCAAACAGAGTTTTACCAATACAGAAGTCAGTGAATGTACAAGCAGCATTGAGAAGTCTGCTGAAACTGAAAGTGAGGTCACTAATTCCTGTGAGCTGACTGAGAGCAGAAAGACCAGTATGTATAGAGGTAGCACTGGAAGTGATGTTAGTGATGAGAGCAGCTCCAGTAGTTTGAGCAATAACATGTACAAGCCCCACAAGGCGAATGATGTGAGATGGGAAGCAATTCAAGCTGTCCGAGATCATGATGGGATGCTGGGTTTGAATCATTTCAAGTTGTTGAAGAGACTGGGATGTGGAGATATAGGCAGTGTTTATCTGTCTGAACTGTCGGGCACTAGAACTTGTTTTGCCATGAAGGTTATGGATAAAGCAGCACTGGCCAGTCGCAAAAAGCTTTTGAGGGCTCAGACAGAAAGAGAGATACTACAGTCTCTGGATCACCCTTTCCTGCCCACATTGTATTCACACTTTGAGACAGAGAAGTTCACATGCTTGTTGATGGAGTATTGCCCTGGAGGTGATCTGCATGCACTCAGGCAAAAACAACCTGGAAAGTATTTTCCAGAGCATGCTGCCAGGTTTTATGTGGCTGAAGTTCTACTTGCTTTGGAGTATTTGCATATGCTTGGGATCATTTACAGAGACCTCAAACCAGAGAATGTTTTAGTGAGGGAAGATGGGCATATAATGCTTTCAGATTTTGACCTTTCATTAAGATGTGCTGTTTCCCCCACCCTGGTTAGATCTTCAAACTCAGGCATGGAGACAAAGAAATCAGCATATTGTGTTCAGCCCGCGTGCATCGAGCCAACTTGTGTAATGCAGCCAGATTGCATTACACCAGCGTGCTTTGCTCCACGCTTTTTCTCAAGCAAGCCCAAGAAGGACAAGAAAAAGACCAAACCCAAGAATGATGTATATAATCAAGTGAGCCCTCTCCCTGAGCTTATTGCAGAACCCACTAGTGCTAGATCAATGTCCTTTGTGGGAACACACGAGTATCTGGCGCCTGAAATAATCAAAGGTGAAGGCCATGGCAGTGCTGTGGATTGGTGGACGTTTGGGATCTTTCTCTATGAACTTTTATTTGGCAAAACTCCATTCAAGGGAGCAGGGAACCGAGCTACTTTGTTTAACGTCGTCGGGCAGCCTTTGAGATTTCCAGAGTCGCCCAGTGTCAGCTTTGCAGCAAGGGACTTGATCAGAGGTCTACTTGTGAAAGAGCCACAGCATCGTCTTGCTTACCGGCGTGGGGCTACAGAAGTCAAACAGCATCCTTTTTTCCAGAGTGTGAATTGGGCGCTAATCCGGTGTACAAATCCGCCTTCGGTGCCAGCAAAACAGAACCTGTTGGACACTTCTCCAAGACCTGATACTCCGAAAGCAGCCGGCACGGACGGGAAGGTACCGGGTGTTGATTTGAAGCCTTCTGGTAATTATATAGAGATTGATTTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

685

Amino Acids

75.12

Weight (kDa)

7.83

Isoelectric Point (pI)

49.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 290 - 440 5.5e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 290 - 439 1.2e-18 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 524 - 627 1.3e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 531 - 614 3.5e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 229, 2002
AccB1I GGYRCC 5 cut(s) 52, 229, 1603, 1927, 2002
AccI GTMKAC 1 cut(s) 1807
AccII CGCG 2 cut(s) 245, 1394
AciI CCGC 2 cut(s) 1392, 1919
AclWI GGATC 3 cut(s) 1041, 1235, 1670
AcoI YGGCCR 2 cut(s) 499, 975
AcsI RAATTY 1 cut(s) 422
AcuI CTGAAG 1 cut(s) 1209
AcyI GRCGYC 1 cut(s) 1604
AfaI GTAC 5 cut(s) 231, 631, 782, 1912, 2004
AfiI CCNNNNNNNGG 5 cut(s) 62, 239, 1333, 1703, 1849
AflIII ACRYGT 1 cut(s) 777
AhdI GACNNNNNGTC 1 cut(s) 96
AhlI ACTAGT 1 cut(s) 1559
AjnI CCWGG 6 cut(s) 85, 469, 1108, 1144, 1172, 1332
AjuI GAANNNNNNNTTGG 2 cut(s) 1668, 1700
AleI CACNNNNGTG 1 cut(s) 1441
AluBI AGCT 8 cut(s) 438, 688, 756, 827, 991, 1543, 1721, 1779
AluI AGCT 8 cut(s) 438, 688, 756, 827, 991, 1543, 1721, 1779
Alw26I GTCTC 5 cut(s) 874, 1032, 1064, 1233, 1355
AlwI GGATC 3 cut(s) 1041, 1235, 1670
AlwNI CAGNNNCTG 2 cut(s) 1030, 1945
AoxI GGCC 4 cut(s) 316, 499, 975, 1627
ApoI RAATTY 1 cut(s) 422
AseI ATTAAT 1 cut(s) 216
Asp700I GAANNNNTTC 2 cut(s) 819, 863
Asp718I GGTACC 2 cut(s) 229, 2002
AspLEI GCGC 4 cut(s) 245, 247, 1606, 1900
AspS9I GGNCC 2 cut(s) 317, 467
AsuC2I CCSGG 1 cut(s) 2007
AsuHPI GGTGA 3 cut(s) 1028, 1127, 1634
AvaII GGWCC 1 cut(s) 467
AxyI CCTNAGG 1 cut(s) 57
BaeGI GKGCMC 1 cut(s) 932
BaeI ACNNNNGTAYC 4 cut(s) 1010, 1043, 1580, 1613
BalI TGGCCA 2 cut(s) 501, 977
BanI GGYRCC 5 cut(s) 52, 229, 1603, 1927, 2002
BanII GRGCYC 2 cut(s) 1003, 1532
BauI CACGAG 1 cut(s) 1592
BbsI GAAGAC 1 cut(s) 191
BccI CCATC 6 cut(s) 121, 401, 804, 836, 1090, 1268
BciT130I CCWGG 6 cut(s) 87, 471, 1110, 1146, 1174, 1334
BclI TGATCA 1 cut(s) 1797
BcnI CCSGG 1 cut(s) 2007
BcoDI GTCTC 5 cut(s) 874, 1032, 1064, 1233, 1355
BcuI ACTAGT 1 cut(s) 1559
BfaI CTAG 5 cut(s) 75, 450, 933, 1560, 1566
BfmI CTRYAG 3 cut(s) 248, 1022, 1854
BfoI RGCGCY 2 cut(s) 1607, 1901
BglII AGATCT 1 cut(s) 1340
Bme1390I CCNGG 7 cut(s) 87, 471, 1110, 1146, 1174, 1334, 2007
Bme18I GGWCC 1 cut(s) 467
BmeRI GACNNNNNGTC 1 cut(s) 96
BmgT120I GGNCC 2 cut(s) 317, 467
BmiI GGNNCC 6 cut(s) 54, 231, 1605, 1715, 1929, 2004
BmrFI CCNGG 7 cut(s) 87, 471, 1110, 1146, 1174, 1334, 2007
BmrI ACTGGG 2 cut(s) 893, 1764
BmsI GCATC 5 cut(s) 409, 837, 1407, 1837, 1879
BmuI ACTGGG 2 cut(s) 893, 1764
BpiI GAAGAC 1 cut(s) 191
BplI GAGNNNNNCTC 2 cut(s) 740, 772
BpmI CTGGAG 3 cut(s) 540, 742, 1131
Bpu10I CCTNAGC 1 cut(s) 1539
BpuEI CTTGAG 1 cut(s) 1450
BpuMI CCSGG 1 cut(s) 2007
BsaHI GRCGYC 1 cut(s) 1604
BsaI GGTCTC 1 cut(s) 1233
BsaJI CCNNGG 5 cut(s) 86, 238, 1108, 1332, 1630
BsaWI WCCGGW 1 cut(s) 1905
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 239, 1333, 1703, 1849
Bse118I RCCGGY 2 cut(s) 1842, 1985
Bse1I ACTGG 8 cut(s) 156, 708, 733, 759, 888, 978, 978, 1770
Bse21I CCTNAGG 1 cut(s) 57
BseBI CCWGG 6 cut(s) 87, 471, 1110, 1146, 1174, 1334
BseDI CCNNGG 5 cut(s) 86, 238, 1108, 1332, 1630
BseGI GGATG 7 cut(s) 146, 152, 393, 400, 852, 893, 1870
BseLI CCNNNNNNNGG 5 cut(s) 62, 239, 1333, 1703, 1849
BseNI ACTGG 8 cut(s) 156, 708, 733, 759, 888, 978, 978, 1770
BsePI GCGCGC 1 cut(s) 243
BseSI GKGCMC 1 cut(s) 932
BseYI CCCAGC 1 cut(s) 850
Bsh1236I CGCG 2 cut(s) 245, 1394
BshFI GGCC 4 cut(s) 318, 501, 977, 1629
BshNI GGYRCC 5 cut(s) 52, 229, 1603, 1927, 2002
BsiSI CCGG 4 cut(s) 1843, 1906, 1986, 2006
BslFI GGGAC 4 cut(s) 84, 103, 541, 1805
BslI CCNNNNNNNGG 5 cut(s) 62, 239, 1333, 1703, 1849
BsmAI GTCTC 5 cut(s) 874, 1032, 1064, 1233, 1355
BsmFI GGGAC 4 cut(s) 84, 103, 541, 1805
BsnI GGCC 4 cut(s) 318, 501, 977, 1629
Bso31I GGTCTC 1 cut(s) 1233
Bsp1286I GDGCHC 3 cut(s) 932, 1003, 1532
Bsp1407I TGTACA 3 cut(s) 629, 780, 1910
Bsp143I GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
Bsp19I CCATGG 2 cut(s) 238, 1630
BspACI CCGC 2 cut(s) 1392, 1919
BspANI GGCC 4 cut(s) 318, 501, 977, 1629
BspFNI CGCG 2 cut(s) 245, 1394
BspHI TCATGA 1 cut(s) 838
BspLI GGNNCC 6 cut(s) 54, 231, 1605, 1715, 1929, 2004
BspMAI CTGCAG 1 cut(s) 252
BspPI GGATC 3 cut(s) 1041, 1235, 1670
BspT107I GGYRCC 5 cut(s) 52, 229, 1603, 1927, 2002
BspTNI GGTCTC 1 cut(s) 1233
BsrFI RCCGGY 2 cut(s) 1842, 1985
BsrGI TGTACA 3 cut(s) 629, 780, 1910
BsrI ACTGG 8 cut(s) 156, 708, 733, 759, 888, 978, 978, 1770
BssAI RCCGGY 2 cut(s) 1842, 1985
BssECI CCNNGG 5 cut(s) 86, 238, 1108, 1332, 1630
BssHII GCGCGC 1 cut(s) 243
BssMI GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
BssNI GRCGYC 1 cut(s) 1604
BssSI CACGAG 1 cut(s) 1592
BssT1I CCWWGG 2 cut(s) 238, 1630
Bst2BI CACGAG 1 cut(s) 1592
Bst2UI CCWGG 6 cut(s) 87, 471, 1110, 1146, 1174, 1334
Bst4CI ACNGT 6 cut(s) 12, 190, 279, 557, 924, 1026
Bst6I CTCTTC 1 cut(s) 872
BstACI GRCGYC 1 cut(s) 1604
BstAPI GCANNNNNTGC 1 cut(s) 1285
BstAUI TGTACA 3 cut(s) 629, 780, 1910
BstDSI CCRYGG 2 cut(s) 238, 1630
BstENI CCTNNNNNAGG 1 cut(s) 60
BstF5I GGATG 7 cut(s) 146, 152, 393, 400, 852, 893, 1870
BstFNI CGCG 2 cut(s) 245, 1394
BstH2I RGCGCY 2 cut(s) 1607, 1901
BstHHI GCGC 4 cut(s) 245, 247, 1606, 1900
BstKTI GATC 8 cut(s) 838, 1036, 1120, 1230, 1343, 1571, 1665, 1800
BstMAI GTCTC 5 cut(s) 874, 1032, 1064, 1233, 1355
BstMBI GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
BstMWI GCNNNNNNNGC 6 cut(s) 170, 824, 974, 1285, 1448, 1927
BstNI CCWGG 6 cut(s) 87, 471, 1110, 1146, 1174, 1334
BstNSI RCATGY 4 cut(s) 781, 1089, 1127, 1169
BstSCI CCNGG 7 cut(s) 85, 469, 1108, 1144, 1172, 1332, 2005
BstSFI CTRYAG 3 cut(s) 248, 1022, 1854
BstSLI GKGCMC 1 cut(s) 932
BstUI CGCG 2 cut(s) 245, 1394
BstV2I GAAGAC 1 cut(s) 191
BstX2I RGATCY 2 cut(s) 1340, 1662
BstYI RGATCY 2 cut(s) 1340, 1662
Bsu36I CCTNAGG 1 cut(s) 57
BsuRI GGCC 4 cut(s) 318, 501, 977, 1629
BtgI CCRYGG 2 cut(s) 238, 1630
BtsCI GGATG 7 cut(s) 146, 152, 393, 400, 852, 893, 1870
BtsI GCAGTG 2 cut(s) 910, 1642
BtsIMutI CAGTG 8 cut(s) 8, 163, 628, 726, 910, 971, 1642, 1777
CaiI CAGNNNCTG 2 cut(s) 1030, 1945
CciI TCATGA 1 cut(s) 838
CfoI GCGC 4 cut(s) 245, 247, 1606, 1900
Cfr10I RCCGGY 2 cut(s) 1842, 1985
Cfr13I GGNCC 2 cut(s) 317, 467
Csp6I GTAC 5 cut(s) 230, 630, 781, 1911, 2003
CviQI GTAC 5 cut(s) 230, 630, 781, 1911, 2003
DinI GGCGCC 1 cut(s) 1605
DpnI GATC 8 cut(s) 837, 1035, 1119, 1229, 1342, 1570, 1664, 1799
DpnII GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
DriI GACNNNNNGTC 1 cut(s) 96
EaeI YGGCCR 2 cut(s) 499, 975
Eam1104I CTCTTC 1 cut(s) 872
Eam1105I GACNNNNNGTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 872
EciI GGCGGA 1 cut(s) 1908
Eco130I CCWWGG 2 cut(s) 238, 1630
Eco24I GRGCYC 2 cut(s) 1003, 1532
Eco31I GGTCTC 1 cut(s) 1233
Eco47I GGWCC 1 cut(s) 467
Eco57I CTGAAG 1 cut(s) 1209
Eco81I CCTNAGG 1 cut(s) 57
EcoNI CCTNNNNNAGG 1 cut(s) 60
EcoRII CCWGG 6 cut(s) 85, 469, 1108, 1144, 1172, 1332
EcoT14I CCWWGG 2 cut(s) 238, 1630
EcoT38I GRGCYC 2 cut(s) 1003, 1532
EgeI GGCGCC 1 cut(s) 1605
EheI GGCGCC 1 cut(s) 1605
ErhI CCWWGG 2 cut(s) 238, 1630
FalI AAGNNNNNCTT 2 cut(s) 1182, 1214
FaqI GGGAC 4 cut(s) 84, 103, 541, 1805
FauI CCCGC 1 cut(s) 1399
FauNDI CATATG 1 cut(s) 1218
FbaI TGATCA 1 cut(s) 1797
FblI GTMKAC 1 cut(s) 1807
FokI GGATG 7 cut(s) 133, 139, 380, 387, 859, 900, 1857
FriOI GRGCYC 2 cut(s) 1003, 1532
FspBI CTAG 5 cut(s) 75, 450, 933, 1560, 1566
GlaI GCGC 4 cut(s) 244, 246, 1605, 1899
GsaI CCCAGC 1 cut(s) 854
GsuI CTGGAG 3 cut(s) 540, 742, 1131
HaeII RGCGCY 2 cut(s) 1607, 1901
HaeIII GGCC 4 cut(s) 318, 501, 977, 1629
HapII CCGG 4 cut(s) 1843, 1906, 1986, 2006
HhaI GCGC 4 cut(s) 245, 247, 1606, 1900
Hin1I GRCGYC 1 cut(s) 1604
Hin6I GCGC 4 cut(s) 243, 245, 1604, 1898
HinP1I GCGC 4 cut(s) 243, 245, 1604, 1898
HindIII AAGCTT 1 cut(s) 989
HinfI GANTC 6 cut(s) 5, 413, 428, 446, 859, 1763
HpaII CCGG 4 cut(s) 1843, 1906, 1986, 2006
HphI GGTGA 3 cut(s) 1028, 1127, 1634
Hpy166II GTNNAC 4 cut(s) 1083, 1653, 1808, 1911
Hpy188III TCNNGA 7 cut(s) 332, 519, 839, 1031, 1160, 1760, 1882
Hpy8I GTNNAC 4 cut(s) 1083, 1653, 1808, 1911
Hpy99I CGWCG 2 cut(s) 1739, 1742
HpyAV CCTTC 7 cut(s) 544, 946, 1474, 1619, 1932, 1993, 2034
HpyCH4III ACNGT 6 cut(s) 12, 190, 279, 557, 924, 1026
HpyCH4IV ACGT 2 cut(s) 1655, 1734
HpyCH4V TGCA 9 cut(s) 250, 1123, 1127, 1216, 1398, 1420, 1431, 1550, 1784
HpyF10VI GCNNNNNNNGC 6 cut(s) 170, 824, 974, 1285, 1448, 1927
HpySE526I ACGT 2 cut(s) 1655, 1734
Hsp92I GRCGYC 1 cut(s) 1604
HspAI GCGC 4 cut(s) 243, 245, 1604, 1898
KasI GGCGCC 1 cut(s) 1603
KpnI GGTACC 2 cut(s) 233, 2006
KroI GCCGGC 1 cut(s) 1985
KroNI GCCGGC 1 cut(s) 1987
Ksp22I TGATCA 1 cut(s) 1797
Kzo9I GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
LmnI GCTCC 3 cut(s) 761, 1456, 1706
LweI GCATC 5 cut(s) 409, 837, 1407, 1837, 1879
MaeI CTAG 5 cut(s) 75, 450, 933, 1560, 1566
MaeII ACGT 2 cut(s) 1655, 1734
MaeIII GTNAC 1 cut(s) 670
MalI GATC 8 cut(s) 837, 1035, 1119, 1229, 1342, 1570, 1664, 1799
MboI GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
MboII GAAGA 6 cut(s) 196, 266, 381, 889, 1283, 1335
MfeI CAATTG 1 cut(s) 125
MflI RGATCY 2 cut(s) 1340, 1662
MhlI GDGCHC 3 cut(s) 932, 1003, 1532
MlsI TGGCCA 2 cut(s) 501, 977
MluCI AATT 8 cut(s) 125, 213, 422, 454, 676, 819, 1891, 2032
MluNI TGGCCA 2 cut(s) 501, 977
Mly113I GGCGCC 1 cut(s) 1604
MlyI GAGTC 1 cut(s) 1772
MmeI TCCRAC 1 cut(s) 1929
Mox20I TGGCCA 2 cut(s) 501, 977
MroNI GCCGGC 1 cut(s) 1985
MroXI GAANNNNTTC 2 cut(s) 819, 863
MscI TGGCCA 2 cut(s) 501, 977
MseI TTAA 3 cut(s) 216, 1310, 1731
MslI CAYNNNNRTG 4 cut(s) 174, 1312, 1441, 1635
Msp20I TGGCCA 2 cut(s) 501, 977
MspI CCGG 4 cut(s) 1843, 1906, 1986, 2006
MspR9I CCNGG 7 cut(s) 87, 471, 1110, 1146, 1174, 1334, 2007
MunI CAATTG 1 cut(s) 125
MvaI CCWGG 6 cut(s) 87, 471, 1110, 1146, 1174, 1334
MvnI CGCG 2 cut(s) 245, 1394
MwoI GCNNNNNNNGC 6 cut(s) 170, 824, 974, 1285, 1448, 1927
NaeI GCCGGC 1 cut(s) 1987
NarI GGCGCC 1 cut(s) 1604
NciI CCSGG 1 cut(s) 2007
NcoI CCATGG 2 cut(s) 238, 1630
NdeI CATATG 1 cut(s) 1218
NdeII GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
NgoMIV GCCGGC 1 cut(s) 1985
NlaIV GGNNCC 6 cut(s) 54, 231, 1605, 1715, 1929, 2004
NmuCI GTSAC 1 cut(s) 670
NspI RCATGY 4 cut(s) 781, 1089, 1127, 1169
OliI CACNNNNGTG 1 cut(s) 1441
PaeI GCATGC 2 cut(s) 1127, 1169
PagI TCATGA 1 cut(s) 838
PauI GCGCGC 1 cut(s) 243
PciI ACATGT 1 cut(s) 777
PdiI GCCGGC 1 cut(s) 1987
PdmI GAANNNNTTC 2 cut(s) 819, 863
PfeI GAWTC 5 cut(s) 5, 413, 428, 446, 859
PflFI GACNNNGTC 1 cut(s) 20
PleI GAGTC 1 cut(s) 1771
PluTI GGCGCC 1 cut(s) 1607
PpsI GAGTC 1 cut(s) 1771
PscI ACATGT 1 cut(s) 777
PshBI ATTAAT 1 cut(s) 216
Psp6I CCWGG 6 cut(s) 85, 469, 1108, 1144, 1172, 1332
PspFI CCCAGC 1 cut(s) 850
PspGI CCWGG 6 cut(s) 85, 469, 1108, 1144, 1172, 1332
PspN4I GGNNCC 6 cut(s) 54, 231, 1605, 1715, 1929, 2004
PspPI GGNCC 2 cut(s) 317, 467
PstI CTGCAG 1 cut(s) 252
PstNI CAGNNNCTG 2 cut(s) 1030, 1945
PsuI RGATCY 2 cut(s) 1340, 1662
PsyI GACNNNGTC 1 cut(s) 20
PteI GCGCGC 1 cut(s) 243
RsaI GTAC 5 cut(s) 231, 631, 782, 1912, 2004
RsaNI GTAC 5 cut(s) 230, 630, 781, 1911, 2003
RseI CAYNNNNRTG 4 cut(s) 174, 1312, 1441, 1635
SaqAI TTAA 3 cut(s) 216, 1310, 1731
Sau3AI GATC 8 cut(s) 835, 1033, 1117, 1227, 1340, 1568, 1662, 1797
Sau96I GGNCC 2 cut(s) 317, 467
SchI GAGTC 1 cut(s) 1772
ScrFI CCNGG 7 cut(s) 87, 471, 1110, 1146, 1174, 1334, 2007
SduI GDGCHC 3 cut(s) 932, 1003, 1532
SfaNI GCATC 5 cut(s) 409, 837, 1407, 1837, 1879
SfcI CTRYAG 3 cut(s) 248, 1022, 1854
SfoI GGCGCC 1 cut(s) 1605
SinI GGWCC 1 cut(s) 467
SmiMI CAYNNNNRTG 4 cut(s) 174, 1312, 1441, 1635
SmlI CTYRAG 1 cut(s) 1465
SmoI CTYRAG 1 cut(s) 1465
SpeI ACTAGT 1 cut(s) 1559
SphI GCATGC 2 cut(s) 1127, 1169
Sse9I AATT 8 cut(s) 125, 213, 422, 454, 676, 819, 1891, 2032
SsiI CCGC 2 cut(s) 1392, 1919
SspDI GGCGCC 1 cut(s) 1603
SspMI CTAG 5 cut(s) 75, 450, 933, 1560, 1566
StyD4I CCNGG 7 cut(s) 85, 469, 1108, 1144, 1172, 1332, 2005
StyI CCWWGG 2 cut(s) 238, 1630
TaaI ACNGT 6 cut(s) 12, 190, 279, 557, 924, 1026
TaiI ACGT 2 cut(s) 1658, 1737
TaqI TCGA 2 cut(s) 80, 1401
TasI AATT 8 cut(s) 125, 213, 422, 454, 676, 819, 1891, 2032
TatI WGTACW 3 cut(s) 629, 780, 1910
TfiI GAWTC 5 cut(s) 5, 413, 428, 446, 859
Tru1I TTAA 3 cut(s) 216, 1310, 1731
Tru9I TTAA 3 cut(s) 216, 1310, 1731
TscAI CASTG 8 cut(s) 15, 163, 628, 733, 910, 978, 1642, 1777
TseFI GTSAC 1 cut(s) 670
Tsp45I GTSAC 1 cut(s) 670
TspDTI ATGAA 5 cut(s) 135, 192, 965, 1296, 1689
TspGWI ACGGA 2 cut(s) 505, 2006
TspRI CASTG 8 cut(s) 15, 163, 628, 733, 910, 978, 1642, 1777
Tth111I GACNNNGTC 1 cut(s) 20
VpaK11BI GGWCC 1 cut(s) 467
VspI ATTAAT 1 cut(s) 216
XagI CCTNNNNNAGG 1 cut(s) 60
XapI RAATTY 1 cut(s) 422
XceI RCATGY 4 cut(s) 781, 1089, 1127, 1169
XcmI CCANNNNNNNNNTGG 3 cut(s) 157, 955, 1180
XmiI GTMKAC 1 cut(s) 1807
XmnI GAANNNNTTC 2 cut(s) 819, 863
XspI CTAG 5 cut(s) 75, 450, 933, 1560, 1566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.