RchiOBHm_Chr3g0449721

phosphatase 2A regulatory subunit

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
1425709 .. 1426259
551 bp
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UTR
Exon/CDS
Intron
PRQ41708

Sequence Viewer

Length: 177 bp
ATGGAGTGCATGGCCCAAGAACTTGTTCTCTTTGAAGATATATTGTGCCAGATTATTGACATGATTTGCCCAGAGAATGAGAATTATATTACACTTCGTGACCTGAAAGGTTGTAAGCTTTCAGGAAGCGTTTTCAATATTCTTTTCAACCTTAACAAGTTCAGCAATGGCCTTTGA

Protein Analysis

58

Amino Acids

6.65

Weight (kDa)

4.33

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 98
AgsI TTSAA 3 cut(s) 35, 136, 148
AjuI GAANNNNNNNTTGG 2 cut(s) 9, 41
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
AoxI GGCC 2 cut(s) 12, 169
Asp700I GAANNNNTTC 1 cut(s) 24
AspS9I GGNCC 1 cut(s) 13
BmgT120I GGNCC 1 cut(s) 13
Bse3DI GCAATG 1 cut(s) 172
BseMI GCAATG 1 cut(s) 172
BshFI GGCC 2 cut(s) 14, 171
BsnI GGCC 2 cut(s) 14, 171
BspANI GGCC 2 cut(s) 14, 171
BsrDI GCAATG 1 cut(s) 172
BsuRI GGCC 2 cut(s) 14, 171
Cfr13I GGNCC 1 cut(s) 13
CviAII CATG 2 cut(s) 10, 61
CviJI RGCY 3 cut(s) 14, 118, 171
CviKI_1 RGCY 3 cut(s) 14, 118, 171
DraIII CACNNNGTG 1 cut(s) 98
FaeI CATG 2 cut(s) 13, 64
FaiI YATR 4 cut(s) 11, 41, 62, 87
FatI CATG 2 cut(s) 9, 60
HaeIII GGCC 2 cut(s) 14, 171
Hin1II CATG 2 cut(s) 13, 64
HindIII AAGCTT 1 cut(s) 116
Hpy188III TCNNGA 2 cut(s) 98, 123
HpyCH4V TGCA 1 cut(s) 9
Hsp92II CATG 2 cut(s) 13, 64
LpnPI CCDG 4 cut(s) 62, 84, 108, 116
MaeIII GTNAC 1 cut(s) 98
MboII GAAGA 1 cut(s) 47
MluCI AATT 1 cut(s) 82
MroXI GAANNNNTTC 1 cut(s) 24
MseI TTAA 1 cut(s) 153
NlaIII CATG 2 cut(s) 13, 64
NmuCI GTSAC 1 cut(s) 98
PdmI GAANNNNTTC 1 cut(s) 24
PspPI GGNCC 1 cut(s) 13
SaqAI TTAA 1 cut(s) 153
Sau96I GGNCC 1 cut(s) 13
SetI ASST 4 cut(s) 105, 112, 120, 153
Sse9I AATT 1 cut(s) 82
SspI AATATT 1 cut(s) 139
TasI AATT 1 cut(s) 82
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TseFI GTSAC 1 cut(s) 98
Tsp45I GTSAC 1 cut(s) 98
XmnI GAANNNNTTC 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.