RLG00000025807

phosphatase 2A regulatory subunit

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
48412762 .. 48413601
840 bp
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UTR
Exon/CDS
Intron
RLM00000025807

Sequence Viewer

Length: 342 bp
ATGGAGTGCATGGCCCAAGAACCTGTTCTCTTTGAAGATATATTGTGCCAGATTATTGACATGATTTTCCCAGAGAATGAGAGCTATTTTACACTCCGTGACCTGAAAGGTTGTATGCTTTCAGGAAGTGTTTTCAATATTCTTTTCAACCTTAACAAGTTCATGGCCTTTGAAACTCGTGATCCGTTTCTCATTCGTCAGGAACGTGAGAATCCAACCTTGACAGAGTGGGATCGGTTTGCACATAGAGAATATATCAGGCTTTCAATGGAAGAAGATGTTGAAGATGCTTCCAATGGAAGTGCAGAAGTTTGGGATGAATCACTTGAGGCTCCCTTTTAA

Protein Analysis

114

Amino Acids

13.36

Weight (kDa)

4.18

Isoelectric Point (pI)

56.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 176, 240
AdeI CACNNNGTG 1 cut(s) 98
AgsI TTSAA 6 cut(s) 35, 136, 148, 173, 267, 284
AjuI GAANNNNNNNTTGG 2 cut(s) 9, 41
AluBI AGCT 1 cut(s) 84
AluI AGCT 1 cut(s) 84
AlwI GGATC 2 cut(s) 176, 240
AoxI GGCC 2 cut(s) 12, 165
Asp700I GAANNNNTTC 1 cut(s) 24
AspS9I GGNCC 1 cut(s) 13
BauI CACGAG 1 cut(s) 177
BmgT120I GGNCC 1 cut(s) 13
BmiI GGNNCC 1 cut(s) 333
BmsI GCATC 1 cut(s) 277
BseGI GGATG 1 cut(s) 322
BsgI GTGCAG 1 cut(s) 324
BshFI GGCC 2 cut(s) 14, 167
BsnI GGCC 2 cut(s) 14, 167
Bsp143I GATC 2 cut(s) 181, 232
BspANI GGCC 2 cut(s) 14, 167
BspLI GGNNCC 1 cut(s) 333
BspPI GGATC 2 cut(s) 176, 240
BssMI GATC 2 cut(s) 181, 232
BssSI CACGAG 1 cut(s) 177
Bst2BI CACGAG 1 cut(s) 177
BstF5I GGATG 1 cut(s) 322
BstKTI GATC 2 cut(s) 184, 235
BstMBI GATC 2 cut(s) 181, 232
BsuRI GGCC 2 cut(s) 14, 167
BtsCI GGATG 1 cut(s) 322
Cfr13I GGNCC 1 cut(s) 13
CviAII CATG 3 cut(s) 10, 61, 163
CviJI RGCY 5 cut(s) 14, 84, 167, 262, 332
CviKI_1 RGCY 5 cut(s) 14, 84, 167, 262, 332
DpnI GATC 2 cut(s) 183, 234
DpnII GATC 2 cut(s) 181, 232
DraIII CACNNNGTG 1 cut(s) 98
FaeI CATG 3 cut(s) 13, 64, 166
FaiI YATR 7 cut(s) 11, 41, 62, 116, 164, 246, 255
FatI CATG 3 cut(s) 9, 60, 162
FokI GGATG 1 cut(s) 329
HaeIII GGCC 2 cut(s) 14, 167
Hin1II CATG 3 cut(s) 13, 64, 166
HinfI GANTC 2 cut(s) 211, 320
Hpy188III TCNNGA 3 cut(s) 123, 179, 200
HpyCH4IV ACGT 1 cut(s) 205
HpyCH4V TGCA 3 cut(s) 9, 242, 305
HpySE526I ACGT 1 cut(s) 205
Hsp92II CATG 3 cut(s) 13, 64, 166
Kzo9I GATC 2 cut(s) 181, 232
LmnI GCTCC 1 cut(s) 337
LpnPI CCDG 7 cut(s) 36, 62, 84, 108, 116, 185, 244
LweI GCATC 1 cut(s) 277
MaeII ACGT 1 cut(s) 205
MaeIII GTNAC 1 cut(s) 98
MalI GATC 2 cut(s) 183, 234
MboI GATC 2 cut(s) 181, 232
MboII GAAGA 4 cut(s) 47, 284, 287, 296
MmeI TCCRAC 1 cut(s) 239
MnlI CCTC 1 cut(s) 322
MroXI GAANNNNTTC 1 cut(s) 24
MseI TTAA 2 cut(s) 153, 340
NdeII GATC 2 cut(s) 181, 232
NlaIII CATG 3 cut(s) 13, 64, 166
NlaIV GGNNCC 1 cut(s) 333
NmuCI GTSAC 1 cut(s) 98
PcsI WCGNNNNNNNCGW 1 cut(s) 202
PdmI GAANNNNTTC 1 cut(s) 24
PfeI GAWTC 2 cut(s) 211, 320
PspN4I GGNNCC 1 cut(s) 333
PspPI GGNCC 1 cut(s) 13
SaqAI TTAA 2 cut(s) 153, 340
Sau3AI GATC 2 cut(s) 181, 232
Sau96I GGNCC 1 cut(s) 13
SetI ASST 7 cut(s) 25, 86, 105, 112, 153, 208, 221
SfaNI GCATC 1 cut(s) 277
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
SspI AATATT 1 cut(s) 139
TaiI ACGT 1 cut(s) 208
TfiI GAWTC 2 cut(s) 211, 320
Tru1I TTAA 2 cut(s) 153, 340
Tru9I TTAA 2 cut(s) 153, 340
TseFI GTSAC 1 cut(s) 98
Tsp45I GTSAC 1 cut(s) 98
TspDTI ATGAA 2 cut(s) 151, 333
TspGWI ACGGA 2 cut(s) 86, 174
XmnI GAANNNNTTC 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.