Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0122341 RchiOBHm_Chr3g0480011 RchiOBHm_Chr6g0278231 RchiOBHm_Chr7g0189681 |
| rosa_roxburghii | Rroxscaffold_1G00001830 Rroxscaffold_5G00336630 |
| rosa_rugosa | Rorug05G0309500 Rorug06G0001300 Rorug06G0089900 Rorug06G0090000 Rorug07G0149800 |
| rosa_samantha | Rh6BG444000 Rh6CG471100 Rh6DG222900 Rh7DG456000 |
| rosa_wichuraiana | Rw2G023610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 94 |
| AcsI | RAATTY | 1 cut(s) | 50 |
| AgsI | TTSAA | 2 cut(s) | 50, 121 |
| AluBI | AGCT | 1 cut(s) | 124 |
| AluI | AGCT | 1 cut(s) | 124 |
| ApoI | RAATTY | 1 cut(s) | 50 |
| AspLEI | GCGC | 1 cut(s) | 89 |
| BfoI | RGCGCY | 1 cut(s) | 90 |
| BglII | AGATCT | 1 cut(s) | 20 |
| BseGI | GGATG | 1 cut(s) | 45 |
| BseMII | CTCAG | 1 cut(s) | 78 |
| BseYI | CCCAGC | 1 cut(s) | 90 |
| Bsp143I | GATC | 1 cut(s) | 20 |
| BspACI | CCGC | 1 cut(s) | 94 |
| BspCNI | CTCAG | 1 cut(s) | 77 |
| BssMI | GATC | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 1 cut(s) | 85 |
| BstDEI | CTNAG | 2 cut(s) | 57, 64 |
| BstF5I | GGATG | 1 cut(s) | 45 |
| BstH2I | RGCGCY | 1 cut(s) | 90 |
| BstHHI | GCGC | 1 cut(s) | 89 |
| BstKTI | GATC | 1 cut(s) | 23 |
| BstMBI | GATC | 1 cut(s) | 20 |
| BstNSI | RCATGY | 1 cut(s) | 108 |
| BstX2I | RGATCY | 1 cut(s) | 20 |
| BstYI | RGATCY | 1 cut(s) | 20 |
| BtsCI | GGATG | 1 cut(s) | 45 |
| Cac8I | GCNNGC | 1 cut(s) | 85 |
| CfoI | GCGC | 1 cut(s) | 89 |
| CviAII | CATG | 1 cut(s) | 105 |
| CviJI | RGCY | 1 cut(s) | 124 |
| CviKI_1 | RGCY | 1 cut(s) | 124 |
| DdeI | CTNAG | 2 cut(s) | 57, 64 |
| DpnI | GATC | 1 cut(s) | 22 |
| DpnII | GATC | 1 cut(s) | 20 |
| FaeI | CATG | 1 cut(s) | 108 |
| FaiI | YATR | 3 cut(s) | 8, 75, 106 |
| FatI | CATG | 1 cut(s) | 104 |
| FokI | GGATG | 1 cut(s) | 52 |
| GlaI | GCGC | 1 cut(s) | 88 |
| GsaI | CCCAGC | 1 cut(s) | 94 |
| HaeII | RGCGCY | 1 cut(s) | 90 |
| HhaI | GCGC | 1 cut(s) | 89 |
| Hin1II | CATG | 1 cut(s) | 108 |
| Hin6I | GCGC | 1 cut(s) | 87 |
| HinP1I | GCGC | 1 cut(s) | 87 |
| HindIII | AAGCTT | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 2 cut(s) | 57, 64 |
| Hsp92II | CATG | 1 cut(s) | 108 |
| HspAI | GCGC | 1 cut(s) | 87 |
| Kzo9I | GATC | 1 cut(s) | 20 |
| LpnPI | CCDG | 4 cut(s) | 39, 97, 104, 120 |
| MaeIII | GTNAC | 1 cut(s) | 76 |
| MalI | GATC | 1 cut(s) | 22 |
| MboI | GATC | 1 cut(s) | 20 |
| MflI | RGATCY | 1 cut(s) | 20 |
| MluCI | AATT | 1 cut(s) | 50 |
| MmeI | TCCRAC | 1 cut(s) | 37 |
| MseI | TTAA | 2 cut(s) | 33, 126 |
| MspA1I | CMGCKG | 1 cut(s) | 94 |
| NdeII | GATC | 1 cut(s) | 20 |
| NlaIII | CATG | 1 cut(s) | 108 |
| NspI | RCATGY | 1 cut(s) | 108 |
| PspFI | CCCAGC | 1 cut(s) | 90 |
| PsuI | RGATCY | 1 cut(s) | 20 |
| SaqAI | TTAA | 2 cut(s) | 33, 126 |
| Sau3AI | GATC | 1 cut(s) | 20 |
| SetI | ASST | 1 cut(s) | 126 |
| SgeI | CNNG | 6 cut(s) | 38, 96, 103, 117, 133, 147 |
| Sse9I | AATT | 1 cut(s) | 50 |
| SsiI | CCGC | 1 cut(s) | 94 |
| TasI | AATT | 1 cut(s) | 50 |
| Tru1I | TTAA | 2 cut(s) | 33, 126 |
| Tru9I | TTAA | 2 cut(s) | 33, 126 |
| XapI | RAATTY | 1 cut(s) | 50 |
| XceI | RCATGY | 1 cut(s) | 108 |