Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0122341 RchiOBHm_Chr3g0480011 RchiOBHm_Chr6g0278231 RchiOBHm_Chr7g0189681 |
| rosa_roxburghii | Rroxscaffold_1G00001830 Rroxscaffold_5G00336630 |
| rosa_rugosa | Rorug05G0309500 Rorug06G0001300 Rorug06G0089900 Rorug06G0090000 Rorug07G0149800 |
| rosa_samantha | Rh6BG444000 Rh6CG471100 Rh6DG222900 Rh7DG456000 |
| rosa_wichuraiana | Rw2G023610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 49 |
| AciI | CCGC | 2 cut(s) | 49, 415 |
| AcsI | RAATTY | 2 cut(s) | 150, 371 |
| AgsI | TTSAA | 3 cut(s) | 148, 371, 442 |
| AjnI | CCWGG | 1 cut(s) | 102 |
| AleI | CACNNNNGTG | 1 cut(s) | 15 |
| AluBI | AGCT | 4 cut(s) | 113, 157, 190, 445 |
| AluI | AGCT | 4 cut(s) | 113, 157, 190, 445 |
| Alw21I | GWGCWC | 1 cut(s) | 192 |
| Alw26I | GTCTC | 1 cut(s) | 261 |
| ApoI | RAATTY | 2 cut(s) | 150, 371 |
| AspLEI | GCGC | 3 cut(s) | 49, 185, 410 |
| AsuHPI | GGTGA | 1 cut(s) | 34 |
| BanII | GRGCYC | 1 cut(s) | 192 |
| Bbv12I | GWGCWC | 1 cut(s) | 192 |
| BbvCI | CCTCAGC | 1 cut(s) | 158 |
| BciT130I | CCWGG | 1 cut(s) | 104 |
| BciVI | GTATCC | 1 cut(s) | 156 |
| BclI | TGATCA | 1 cut(s) | 127 |
| BcoDI | GTCTC | 1 cut(s) | 261 |
| BfoI | RGCGCY | 1 cut(s) | 411 |
| BfuI | GTATCC | 1 cut(s) | 156 |
| Bme1390I | CCNGG | 1 cut(s) | 104 |
| BmrFI | CCNGG | 1 cut(s) | 104 |
| BmsI | GCATC | 2 cut(s) | 277, 307 |
| Bpu10I | CCTNAGC | 2 cut(s) | 158, 191 |
| BsaJI | CCNNGG | 2 cut(s) | 204, 261 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 102, 132 |
| Bse3DI | GCAATG | 1 cut(s) | 327 |
| BseBI | CCWGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 2 cut(s) | 204, 261 |
| BseGI | GGATG | 2 cut(s) | 201, 366 |
| BseMI | GCAATG | 1 cut(s) | 327 |
| BseMII | CTCAG | 3 cut(s) | 149, 205, 399 |
| BseRI | GAGGAG | 1 cut(s) | 221 |
| BseYI | CCCAGC | 1 cut(s) | 411 |
| Bsh1236I | CGCG | 1 cut(s) | 49 |
| BsiHKAI | GWGCWC | 1 cut(s) | 192 |
| BsmAI | GTCTC | 1 cut(s) | 261 |
| Bsp1286I | GDGCHC | 1 cut(s) | 192 |
| Bsp143I | GATC | 1 cut(s) | 127 |
| BspACI | CCGC | 2 cut(s) | 49, 415 |
| BspCNI | CTCAG | 3 cut(s) | 150, 204, 398 |
| BspFNI | CGCG | 1 cut(s) | 49 |
| BsrDI | GCAATG | 1 cut(s) | 327 |
| BssECI | CCNNGG | 2 cut(s) | 204, 261 |
| BssMI | GATC | 1 cut(s) | 127 |
| BssT1I | CCWWGG | 1 cut(s) | 261 |
| Bst2UI | CCWGG | 1 cut(s) | 104 |
| BstC8I | GCNNGC | 1 cut(s) | 406 |
| BstDEI | CTNAG | 4 cut(s) | 158, 191, 378, 385 |
| BstF5I | GGATG | 2 cut(s) | 201, 366 |
| BstFNI | CGCG | 1 cut(s) | 49 |
| BstH2I | RGCGCY | 1 cut(s) | 411 |
| BstHHI | GCGC | 3 cut(s) | 49, 185, 410 |
| BstKTI | GATC | 1 cut(s) | 130 |
| BstMAI | GTCTC | 1 cut(s) | 261 |
| BstMBI | GATC | 1 cut(s) | 127 |
| BstNI | CCWGG | 1 cut(s) | 104 |
| BstNSI | RCATGY | 1 cut(s) | 429 |
| BstSCI | CCNGG | 1 cut(s) | 102 |
| BstUI | CGCG | 1 cut(s) | 49 |
| BsuI | GTATCC | 1 cut(s) | 156 |
| BtsCI | GGATG | 2 cut(s) | 201, 366 |
| BtsI | GCAGTG | 1 cut(s) | 399 |
| BtsIMutI | CAGTG | 1 cut(s) | 399 |
| Cac8I | GCNNGC | 1 cut(s) | 406 |
| CfoI | GCGC | 3 cut(s) | 49, 185, 410 |
| CviAII | CATG | 1 cut(s) | 426 |
| CviJI | RGCY | 5 cut(s) | 113, 157, 190, 306, 445 |
| CviKI_1 | RGCY | 5 cut(s) | 113, 157, 190, 306, 445 |
| DdeI | CTNAG | 4 cut(s) | 158, 191, 378, 385 |
| DpnI | GATC | 1 cut(s) | 129 |
| DpnII | GATC | 1 cut(s) | 127 |
| Ecl136II | GAGCTC | 1 cut(s) | 190 |
| Eco130I | CCWWGG | 1 cut(s) | 261 |
| Eco24I | GRGCYC | 1 cut(s) | 192 |
| Eco53kI | GAGCTC | 1 cut(s) | 190 |
| EcoICRI | GAGCTC | 1 cut(s) | 190 |
| EcoRII | CCWGG | 1 cut(s) | 102 |
| EcoT14I | CCWWGG | 1 cut(s) | 261 |
| EcoT38I | GRGCYC | 1 cut(s) | 192 |
| ErhI | CCWWGG | 1 cut(s) | 261 |
| FaeI | CATG | 1 cut(s) | 429 |
| FaiI | YATR | 6 cut(s) | 135, 303, 329, 396, 427, 432 |
| FatI | CATG | 1 cut(s) | 425 |
| FauI | CCCGC | 1 cut(s) | 42 |
| FbaI | TGATCA | 1 cut(s) | 127 |
| FokI | GGATG | 2 cut(s) | 208, 373 |
| FriOI | GRGCYC | 1 cut(s) | 192 |
| GlaI | GCGC | 3 cut(s) | 48, 184, 409 |
| GsaI | CCCAGC | 1 cut(s) | 415 |
| HaeII | RGCGCY | 1 cut(s) | 411 |
| HhaI | GCGC | 3 cut(s) | 49, 185, 410 |
| Hin1II | CATG | 1 cut(s) | 429 |
| Hin6I | GCGC | 3 cut(s) | 47, 183, 408 |
| HinP1I | GCGC | 3 cut(s) | 47, 183, 408 |
| HincII | GTYRAC | 2 cut(s) | 139, 201 |
| HindII | GTYRAC | 2 cut(s) | 139, 201 |
| HindIII | AAGCTT | 1 cut(s) | 443 |
| HinfI | GANTC | 1 cut(s) | 60 |
| HpaI | GTTAAC | 1 cut(s) | 201 |
| HphI | GGTGA | 1 cut(s) | 34 |
| Hpy166II | GTNNAC | 2 cut(s) | 139, 201 |
| Hpy188I | TCNGA | 3 cut(s) | 228, 273, 316 |
| Hpy188III | TCNNGA | 1 cut(s) | 193 |
| Hpy8I | GTNNAC | 2 cut(s) | 139, 201 |
| HpyAV | CCTTC | 2 cut(s) | 15, 66 |
| HpyCH4V | TGCA | 1 cut(s) | 320 |
| HpyF3I | CTNAG | 4 cut(s) | 158, 191, 378, 385 |
| Hsp92II | CATG | 1 cut(s) | 429 |
| HspAI | GCGC | 3 cut(s) | 47, 183, 408 |
| Ksp22I | TGATCA | 1 cut(s) | 127 |
| KspAI | GTTAAC | 1 cut(s) | 201 |
| Kzo9I | GATC | 1 cut(s) | 127 |
| LmnI | GCTCC | 3 cut(s) | 110, 208, 265 |
| LpnPI | CCDG | 6 cut(s) | 89, 116, 178, 360, 418, 425 |
| LweI | GCATC | 2 cut(s) | 277, 307 |
| MaeIII | GTNAC | 1 cut(s) | 95 |
| MalI | GATC | 1 cut(s) | 129 |
| MboI | GATC | 1 cut(s) | 127 |
| MboII | GAAGA | 2 cut(s) | 81, 303 |
| MhlI | GDGCHC | 1 cut(s) | 192 |
| MluCI | AATT | 3 cut(s) | 150, 371, 469 |
| MlyI | GAGTC | 1 cut(s) | 69 |
| MmeI | TCCRAC | 3 cut(s) | 88, 100, 358 |
| MnlI | CCTC | 4 cut(s) | 153, 165, 199, 354 |
| MseI | TTAA | 5 cut(s) | 177, 200, 354, 447, 472 |
| MslI | CAYNNNNRTG | 1 cut(s) | 15 |
| MspA1I | CMGCKG | 2 cut(s) | 157, 415 |
| MspR9I | CCNGG | 1 cut(s) | 104 |
| MvaI | CCWGG | 1 cut(s) | 104 |
| MvnI | CGCG | 1 cut(s) | 49 |
| NdeII | GATC | 1 cut(s) | 127 |
| NlaIII | CATG | 1 cut(s) | 429 |
| NspI | RCATGY | 1 cut(s) | 429 |
| OliI | CACNNNNGTG | 1 cut(s) | 15 |
| PleI | GAGTC | 1 cut(s) | 68 |
| PpsI | GAGTC | 1 cut(s) | 68 |
| Psp124BI | GAGCTC | 1 cut(s) | 192 |
| Psp6I | CCWGG | 1 cut(s) | 102 |
| PspFI | CCCAGC | 1 cut(s) | 411 |
| PspGI | CCWGG | 1 cut(s) | 102 |
| PvuII | CAGCTG | 1 cut(s) | 157 |
| RseI | CAYNNNNRTG | 1 cut(s) | 15 |
| SacI | GAGCTC | 1 cut(s) | 192 |
| SaqAI | TTAA | 5 cut(s) | 177, 200, 354, 447, 472 |
| Sau3AI | GATC | 1 cut(s) | 127 |
| SchI | GAGTC | 1 cut(s) | 69 |
| ScrFI | CCNGG | 1 cut(s) | 104 |
| SduI | GDGCHC | 1 cut(s) | 192 |
| SetI | ASST | 6 cut(s) | 108, 115, 159, 192, 346, 447 |
| SfaNI | GCATC | 2 cut(s) | 277, 307 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 15 |
| Sse9I | AATT | 3 cut(s) | 150, 371, 469 |
| SsiI | CCGC | 2 cut(s) | 49, 415 |
| SspI | AATATT | 1 cut(s) | 284 |
| SstI | GAGCTC | 1 cut(s) | 192 |
| StyD4I | CCNGG | 1 cut(s) | 102 |
| StyI | CCWWGG | 1 cut(s) | 261 |
| TasI | AATT | 3 cut(s) | 150, 371, 469 |
| Tru1I | TTAA | 5 cut(s) | 177, 200, 354, 447, 472 |
| Tru9I | TTAA | 5 cut(s) | 177, 200, 354, 447, 472 |
| TscAI | CASTG | 1 cut(s) | 406 |
| TspDTI | ATGAA | 2 cut(s) | 232, 234 |
| TspRI | CASTG | 1 cut(s) | 406 |
| XapI | RAATTY | 2 cut(s) | 150, 371 |
| XceI | RCATGY | 1 cut(s) | 429 |