RchiOBHm_Chr3g0497531

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0009369
Physical Location & Seq
Reverse (-)
49584431 .. 49589692
5262 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45970

Sequence Viewer

Length: 1632 bp
ATGAGAAACATTAGCAGATTGAAGTGGTTGTGCACGATTATGGTTGAAAAACCCTATGGCGTGATGATTGGCATGAGGGTCAGAGTCGGAGCGGCTCAAACGCATTCCTTTGCAACGGGAGCATACTCTGGGAAGTCAAGGGATGATGCTGATGCCATAAAAATGATTGTGGATCTGCGCTCATCCTGCAGCAGCGGGTGTGTGGAGCTGAAGAAGAAGCTGGAGCAGTGCGGCGTAGCAGCCTCAGCCTCAACGGAGCTGGTGGTGGAGATTCTTTCGCGTTTTCGCAACGATTGGGAATCGGCCTTCACCTTCTTCCTCTGGGCAGGAAAGCAGCGTCCCCATTCCGTGCGTGAATACCACTCGATGATCTCCATTCTGGGGAAGATGAGGAAATTCGACACTGCCTGGGCCCTGATCGATGAAATGCGGAGCGGTTCGTGTTCGGGTTCGGGTTCGGGTTCCTCCCTTGTCACTCCTCAAACTCTGTTACTCATGATTCGAAAATACTCTTGTGCTCATGATGTTGGGAGGGCCATTCACACTTTCTACGCCTATAAGCGGTTTGCGTTTGAGGCCGGCATGGATGACTTCCAAGGCCTTCTCTCCGCCCTCTGCCGCTACAAAAATGTCCCTGAAGCTGAGCACTTGCTTTTCTGCAACTCACATGTCTTCCCATTTAACACCAAGAGCTTCAACATTATTCTCAACGGCTGGTCTAATATCATCGTTAGTCCCCGCCACGCCGACCGAATTTGGACTGAAATGACCAACCGGGGCGTCCCCCACGATGCCATTTCCTATTCATGTCTCATTTCTTGCCATTCCAAATCCTCCAATCTCACCAAGGTGCTCAACATCTTCCGCCGCATGAACAAAATGAATGTTGAGCCTGACACTAAGGTTTACAATGCCCTCATTTTCGCTCTTGGAAAAGCCGGTCTCTTCAAAGAAGCTTCCAATCTCATGAAAACCATGCAAGAAAAGGGTCTTGCGCCCAACATTGTCACTTATAACTCCCTCATCAAGACTCTCTGCAAGGCCAGGGAAATTGATCAAGCTACACACATTCTCCATGACATGTTGCACCATGGCCTTGTTCCAACAATTCGGACTTACCATGCCTTCTTCCGTATTTTATCAACCGGGGACCAAGTGTTTGAGCTCTTGGAAAAGATGAAAAACACCGGTTGCCCTCCAAATACTGATACATACATAATGTTGATTAGGAAATTCTGTCGATGGCGCCAGCTTGATAATGTCTTCAAGATTTGGAGTCAGATGAGCGAGAATGGAGTCGGTCCTGATCGTAGCTCATATATTGTGCTCATACATGGGCTCTTTCTAAATGCCAAGTTGGAGGAAGCCCACAAATATTATATGGAGATGAAAGATAGACACTATTTGCCAGAACCAAGGACAGAAGAGATGCTTCAGGCATGGTTGTCTGGTAAGCAGACTTCTAAATTCCAAACAACAGATGGAGAAGTTGATCAAGTGGATTGTACTCAGCCAGCTACGAATACTAAACTAGTAATCCCCAAGAAATCTCCTCAGGAAAAACATTTCCGTCGGCAACCTGAAAGTAGGAAAGTTGTAAGAGAGCGGGGTTTTTCTTTTTGGGAGCAGTAG

Protein Analysis

543

Amino Acids

62.1

Weight (kDa)

9.33

Isoelectric Point (pI)

44.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 251 - 312 4.4e-07 Pentatricopeptide repeat domain
PPR_long PF17177 252 - 379 5.6e-12 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 264 - 309 1.7e-07 PPR repeat family
PPR_2 PF13041 298 - 347 1.8e-14 PPR repeat family
PPR_3 PF13812 322 - 376 1.3e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 329 - 361 1.3e-09 PPR repeat
PPR_2 PF13041 333 - 378 4.2e-11 PPR repeat family
PPR_2 PF13041 384 - 414 1e-06 PPR repeat family
PPR_2 PF13041 408 - 447 3.1e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1014
AccB1I GGYRCC 1 cut(s) 1245
AccBSI CCGCTC 3 cut(s) 92, 435, 1606
AccII CGCG 1 cut(s) 280
AclWI GGATC 1 cut(s) 180
AcsI RAATTY 4 cut(s) 395, 753, 1232, 1466
AcuI CTGAAG 3 cut(s) 230, 657, 1418
AcyI GRCGYC 2 cut(s) 780, 1246
AfaI GTAC 1 cut(s) 1507
AfiI CCNNNNNNNGG 2 cut(s) 381, 561
AflIII ACRYGT 2 cut(s) 667, 1080
AgeI ACCGGT 1 cut(s) 1187
AgsI TTSAA 5 cut(s) 22, 47, 697, 949, 1267
AhlI ACTAGT 1 cut(s) 1531
AjnI CCWGG 2 cut(s) 407, 1043
AleI CACNNNNGTG 1 cut(s) 848
Alw21I GWGCWC 6 cut(s) 35, 520, 648, 855, 1167, 1329
Alw26I GTCTC 2 cut(s) 815, 947
Alw44I GTGCAC 1 cut(s) 31
AlwI GGATC 1 cut(s) 180
AoxI GGCC 7 cut(s) 303, 411, 534, 576, 598, 1041, 1093
ApaI GGGCCC 1 cut(s) 415
ApaLI GTGCAC 1 cut(s) 31
ApeKI GCWGC 4 cut(s) 189, 192, 239, 334
ApoI RAATTY 4 cut(s) 395, 753, 1232, 1466
ArsI GACNNNNNNTTYG 2 cut(s) 1142, 1174
AsiGI ACCGGT 1 cut(s) 1187
AspLEI GCGC 3 cut(s) 180, 997, 1248
AspS9I GGNCC 5 cut(s) 411, 412, 534, 1150, 1301
AsuC2I CCSGG 2 cut(s) 776, 1147
AsuHPI GGTGA 2 cut(s) 301, 835
AsuII TTCGAA 1 cut(s) 502
AvaII GGWCC 2 cut(s) 1150, 1301
AxyI CCTNAGG 1 cut(s) 1554
BaeGI GKGCMC 2 cut(s) 35, 415
BanI GGYRCC 1 cut(s) 1245
BanII GRGCYC 3 cut(s) 415, 1167, 1341
BarI GAAGNNNNNNTAC 2 cut(s) 1444, 1476
BbsI GAAGAC 2 cut(s) 664, 1255
Bbv12I GWGCWC 6 cut(s) 35, 520, 648, 855, 1167, 1329
BbvCI CCTCAGC 1 cut(s) 244
BbvI GCAGC 4 cut(s) 201, 204, 251, 346
BccI CCATC 2 cut(s) 1236, 1475
BceAI ACGGC 1 cut(s) 727
BciT130I CCWGG 2 cut(s) 409, 1045
BclI TGATCA 2 cut(s) 1054, 1492
BcnI CCSGG 2 cut(s) 776, 1147
BcoDI GTCTC 2 cut(s) 815, 947
BcuI ACTAGT 1 cut(s) 1531
BfaI CTAG 1 cut(s) 1532
BfmI CTRYAG 1 cut(s) 187
BfoI RGCGCY 1 cut(s) 1249
BisI GCNGC 8 cut(s) 93, 190, 193, 232, 240, 335, 619, 868
BlpI GCTNAGC 1 cut(s) 642
BlsI GCNGC 8 cut(s) 94, 191, 194, 233, 241, 336, 620, 869
Bme1390I CCNGG 4 cut(s) 409, 776, 1045, 1147
Bme18I GGWCC 2 cut(s) 1150, 1301
BmgT120I GGNCC 5 cut(s) 411, 412, 534, 1150, 1301
BmiI GGNNCC 4 cut(s) 413, 463, 1151, 1247
BmrFI CCNGG 4 cut(s) 409, 776, 1045, 1147
BmsI GCATC 4 cut(s) 136, 142, 781, 1419
BpiI GAAGAC 2 cut(s) 664, 1255
BpmI CTGGAG 1 cut(s) 242
Bpu10I CCTNAGC 1 cut(s) 244
Bpu1102I GCTNAGC 1 cut(s) 642
Bpu14I TTCGAA 1 cut(s) 502
BpuMI CCSGG 2 cut(s) 776, 1147
Bsa29I ATCGAT 1 cut(s) 420
BsaHI GRCGYC 2 cut(s) 780, 1246
BsaI GGTCTC 1 cut(s) 947
BsaJI CCNNGG 8 cut(s) 408, 595, 775, 846, 1044, 1090, 1146, 1415
BsaWI WCCGGW 1 cut(s) 1187
BsaXI ACNNNNNCTCC 2 cut(s) 1056, 1086
Bsc4I CCNNNNNNNGG 2 cut(s) 381, 561
Bse118I RCCGGY 3 cut(s) 578, 938, 1187
Bse21I CCTNAGG 1 cut(s) 1554
BseBI CCWGG 2 cut(s) 409, 1045
BseCI ATCGAT 1 cut(s) 420
BseDI CCNNGG 8 cut(s) 408, 595, 775, 846, 1044, 1090, 1146, 1415
BseGI GGATG 3 cut(s) 148, 182, 592
BseLI CCNNNNNNNGG 2 cut(s) 381, 561
BseMII CTCAG 4 cut(s) 258, 633, 1523, 1568
BseRI GAGGAG 2 cut(s) 468, 1542
BseSI GKGCMC 2 cut(s) 35, 415
BseXI GCAGC 4 cut(s) 201, 204, 251, 346
Bsh1236I CGCG 1 cut(s) 280
Bsh1285I CGRYCG 1 cut(s) 751
BshFI GGCC 7 cut(s) 305, 413, 536, 578, 600, 1043, 1095
BshNI GGYRCC 1 cut(s) 1245
BshTI ACCGGT 1 cut(s) 1187
BshVI ATCGAT 1 cut(s) 420
BsiEI CGRYCG 1 cut(s) 751
BsiHKAI GWGCWC 6 cut(s) 35, 520, 648, 855, 1167, 1329
BsiSI CCGG 5 cut(s) 579, 775, 939, 1146, 1188
BslFI GGGAC 5 cut(s) 324, 617, 720, 767, 1163
BslI CCNNNNNNNGG 2 cut(s) 381, 561
BsmAI GTCTC 2 cut(s) 815, 947
BsmFI GGGAC 5 cut(s) 324, 617, 720, 767, 1163
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 7 cut(s) 305, 413, 536, 578, 600, 1043, 1095
Bso31I GGTCTC 1 cut(s) 947
Bsp119I TTCGAA 1 cut(s) 502
Bsp120I GGGCCC 1 cut(s) 411
Bsp1286I GDGCHC 8 cut(s) 35, 415, 520, 648, 855, 1167, 1329, 1341
Bsp143I GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
Bsp1720I GCTNAGC 1 cut(s) 642
Bsp19I CCATGG 1 cut(s) 1090
BspANI GGCC 7 cut(s) 305, 413, 536, 578, 600, 1043, 1095
BspCNI CTCAG 4 cut(s) 257, 634, 1522, 1567
BspDI ATCGAT 1 cut(s) 420
BspFNI CGCG 1 cut(s) 280
BspHI TCATGA 3 cut(s) 495, 520, 966
BspLI GGNNCC 4 cut(s) 413, 463, 1151, 1247
BspMAI CTGCAG 1 cut(s) 191
BspPI GGATC 1 cut(s) 180
BspT104I TTCGAA 1 cut(s) 502
BspT107I GGYRCC 1 cut(s) 1245
BspTNI GGTCTC 1 cut(s) 947
BsrBI CCGCTC 3 cut(s) 92, 435, 1606
BsrFI RCCGGY 3 cut(s) 578, 938, 1187
BssAI RCCGGY 3 cut(s) 578, 938, 1187
BssECI CCNNGG 8 cut(s) 408, 595, 775, 846, 1044, 1090, 1146, 1415
BssMI GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
BssNI GRCGYC 2 cut(s) 780, 1246
BssT1I CCWWGG 4 cut(s) 595, 846, 1090, 1415
Bst2UI CCWGG 2 cut(s) 409, 1045
Bst6I CTCTTC 2 cut(s) 950, 1419
BstACI GRCGYC 2 cut(s) 780, 1246
BstBI TTCGAA 1 cut(s) 502
BstC8I GCNNGC 3 cut(s) 580, 1250, 1515
BstDEI CTNAG 5 cut(s) 244, 642, 900, 1509, 1554
BstDSI CCRYGG 1 cut(s) 1090
BstF5I GGATG 3 cut(s) 148, 182, 592
BstFNI CGCG 1 cut(s) 280
BstH2I RGCGCY 1 cut(s) 1249
BstHHI GCGC 3 cut(s) 180, 997, 1248
BstKTI GATC 6 cut(s) 175, 372, 420, 1057, 1309, 1495
BstMAI GTCTC 2 cut(s) 815, 947
BstMBI GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
BstMCI CGRYCG 1 cut(s) 751
BstMWI GCNNNNNNNGC 4 cut(s) 119, 186, 245, 575
BstNI CCWGG 2 cut(s) 409, 1045
BstNSI RCATGY 2 cut(s) 671, 1084
BstSCI CCNGG 4 cut(s) 407, 774, 1043, 1145
BstSFI CTRYAG 1 cut(s) 187
BstSLI GKGCMC 2 cut(s) 35, 415
BstUI CGCG 1 cut(s) 280
BstV1I GCAGC 4 cut(s) 201, 204, 251, 346
BstV2I GAAGAC 2 cut(s) 664, 1255
BstX2I RGATCY 1 cut(s) 172
BstYI RGATCY 1 cut(s) 172
Bsu15I ATCGAT 1 cut(s) 420
Bsu36I CCTNAGG 1 cut(s) 1554
BsuRI GGCC 7 cut(s) 305, 413, 536, 578, 600, 1043, 1095
BsuTUI ATCGAT 1 cut(s) 420
BtgI CCRYGG 1 cut(s) 1090
BtsCI GGATG 3 cut(s) 148, 182, 592
BtsI GCAGTG 2 cut(s) 233, 402
BtsIMutI CAGTG 2 cut(s) 233, 402
Cac8I GCNNGC 3 cut(s) 580, 1250, 1515
CciI TCATGA 3 cut(s) 495, 520, 966
CfoI GCGC 3 cut(s) 180, 997, 1248
Cfr10I RCCGGY 3 cut(s) 578, 938, 1187
Cfr13I GGNCC 5 cut(s) 411, 412, 534, 1150, 1301
ClaI ATCGAT 1 cut(s) 420
CseI GACGC 2 cut(s) 326, 769
Csp6I GTAC 1 cut(s) 1506
CspAI ACCGGT 1 cut(s) 1187
CviQI GTAC 1 cut(s) 1506
DdeI CTNAG 5 cut(s) 244, 642, 900, 1509, 1554
DinI GGCGCC 1 cut(s) 1247
DpnI GATC 6 cut(s) 174, 371, 419, 1056, 1308, 1494
DpnII GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
Eam1104I CTCTTC 2 cut(s) 950, 1419
EarI CTCTTC 2 cut(s) 950, 1419
EciI GGCGGA 2 cut(s) 598, 854
Ecl136II GAGCTC 1 cut(s) 1165
Eco130I CCWWGG 4 cut(s) 595, 846, 1090, 1415
Eco147I AGGCCT 1 cut(s) 600
Eco24I GRGCYC 3 cut(s) 415, 1167, 1341
Eco31I GGTCTC 1 cut(s) 947
Eco47I GGWCC 2 cut(s) 1150, 1301
Eco53kI GAGCTC 1 cut(s) 1165
Eco57I CTGAAG 3 cut(s) 230, 657, 1418
Eco81I CCTNAGG 1 cut(s) 1554
EcoICRI GAGCTC 1 cut(s) 1165
EcoO109I RGGNCCY 1 cut(s) 412
EcoRII CCWGG 2 cut(s) 407, 1043
EcoT14I CCWWGG 4 cut(s) 595, 846, 1090, 1415
EcoT38I GRGCYC 3 cut(s) 415, 1167, 1341
EgeI GGCGCC 1 cut(s) 1247
EheI GGCGCC 1 cut(s) 1247
ErhI CCWWGG 4 cut(s) 595, 846, 1090, 1415
FalI AAGNNNNNCTT 2 cut(s) 1416, 1448
FaqI GGGAC 5 cut(s) 324, 617, 720, 767, 1163
FauI CCCGC 3 cut(s) 188, 746, 1599
FbaI TGATCA 2 cut(s) 1054, 1492
Fnu4HI GCNGC 8 cut(s) 93, 190, 193, 232, 240, 335, 619, 868
FokI GGATG 3 cut(s) 155, 169, 599
FriOI GRGCYC 3 cut(s) 415, 1167, 1341
Fsp4HI GCNGC 8 cut(s) 93, 190, 193, 232, 240, 335, 619, 868
FspBI CTAG 1 cut(s) 1532
GlaI GCGC 3 cut(s) 179, 996, 1247
GluI GCNGC 8 cut(s) 93, 190, 193, 232, 240, 335, 619, 868
GsuI CTGGAG 1 cut(s) 242
HaeII RGCGCY 1 cut(s) 1249
HaeIII GGCC 7 cut(s) 305, 413, 536, 578, 600, 1043, 1095
HapII CCGG 5 cut(s) 579, 775, 939, 1146, 1188
HgaI GACGC 2 cut(s) 326, 769
HhaI GCGC 3 cut(s) 180, 997, 1248
Hin1I GRCGYC 2 cut(s) 780, 1246
Hin6I GCGC 3 cut(s) 178, 995, 1246
HinP1I GCGC 3 cut(s) 178, 995, 1246
HindIII AAGCTT 1 cut(s) 954
HinfI GANTC 7 cut(s) 84, 271, 299, 499, 1030, 1276, 1296
HpaII CCGG 5 cut(s) 579, 775, 939, 1146, 1188
HphI GGTGA 2 cut(s) 301, 835
Hpy166II GTNNAC 2 cut(s) 33, 907
Hpy188I TCNGA 4 cut(s) 83, 89, 1113, 1281
Hpy188III TCNNGA 7 cut(s) 496, 521, 967, 1027, 1267, 1304, 1556
Hpy8I GTNNAC 2 cut(s) 33, 907
Hpy99I CGWCG 1 cut(s) 1575
HpyAV CCTTC 4 cut(s) 316, 322, 611, 1135
HpyCH4V TGCA 7 cut(s) 33, 113, 189, 660, 979, 1038, 1087
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 186, 245, 575
HpyF3I CTNAG 5 cut(s) 244, 642, 900, 1509, 1554
Hsp92I GRCGYC 2 cut(s) 780, 1246
HspAI GCGC 3 cut(s) 178, 995, 1246
KasI GGCGCC 1 cut(s) 1245
KroI GCCGGC 1 cut(s) 578
KroNI GCCGGC 1 cut(s) 580
Ksp22I TGATCA 2 cut(s) 1054, 1492
Kzo9I GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
LmnI GCTCC 7 cut(s) 89, 119, 205, 223, 256, 432, 1624
Lsp1109I GCAGC 4 cut(s) 201, 204, 251, 346
LweI GCATC 4 cut(s) 136, 142, 781, 1419
MaeI CTAG 1 cut(s) 1532
MaeIII GTNAC 3 cut(s) 472, 489, 1006
MalI GATC 6 cut(s) 174, 371, 419, 1056, 1308, 1494
MbiI CCGCTC 3 cut(s) 92, 435, 1606
MboI GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
MflI RGATCY 1 cut(s) 172
MhlI GDGCHC 8 cut(s) 35, 415, 520, 648, 855, 1167, 1329, 1341
MluCI AATT 6 cut(s) 395, 753, 1050, 1107, 1232, 1466
Mly113I GGCGCC 1 cut(s) 1246
MlyI GAGTC 4 cut(s) 93, 1024, 1285, 1305
MmeI TCCRAC 3 cut(s) 67, 1127, 1338
MroNI GCCGGC 1 cut(s) 578
MseI TTAA 1 cut(s) 681
MslI CAYNNNNRTG 3 cut(s) 38, 161, 848
MspA1I CMGCKG 1 cut(s) 195
MspI CCGG 5 cut(s) 579, 775, 939, 1146, 1188
MspR9I CCNGG 4 cut(s) 409, 776, 1045, 1147
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 2 cut(s) 409, 1045
MvnI CGCG 1 cut(s) 280
MwoI GCNNNNNNNGC 4 cut(s) 119, 186, 245, 575
NaeI GCCGGC 1 cut(s) 580
NarI GGCGCC 1 cut(s) 1246
NciI CCSGG 2 cut(s) 776, 1147
NcoI CCATGG 1 cut(s) 1090
NdeII GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
NgoMIV GCCGGC 1 cut(s) 578
NlaIV GGNNCC 4 cut(s) 413, 463, 1151, 1247
NmuCI GTSAC 2 cut(s) 472, 1006
NspI RCATGY 2 cut(s) 671, 1084
NspV TTCGAA 1 cut(s) 502
OliI CACNNNNGTG 1 cut(s) 848
PagI TCATGA 3 cut(s) 495, 520, 966
PceI AGGCCT 1 cut(s) 600
PciI ACATGT 2 cut(s) 667, 1080
PctI GAATGC 1 cut(s) 103
PdiI GCCGGC 1 cut(s) 580
PfeI GAWTC 3 cut(s) 271, 299, 499
PinAI ACCGGT 1 cut(s) 1187
PkrI GCNGC 8 cut(s) 94, 191, 194, 233, 241, 336, 620, 869
PleI GAGTC 4 cut(s) 92, 1024, 1284, 1304
PluTI GGCGCC 1 cut(s) 1249
PpsI GAGTC 4 cut(s) 92, 1024, 1284, 1304
PscI ACATGT 2 cut(s) 667, 1080
PsiI TTATAA 1 cut(s) 1014
Psp124BI GAGCTC 1 cut(s) 1167
Psp6I CCWGG 2 cut(s) 407, 1043
PspGI CCWGG 2 cut(s) 407, 1043
PspN4I GGNNCC 4 cut(s) 413, 463, 1151, 1247
PspOMI GGGCCC 1 cut(s) 411
PspPI GGNCC 5 cut(s) 411, 412, 534, 1150, 1301
PstI CTGCAG 1 cut(s) 191
PsuI RGATCY 1 cut(s) 172
RsaI GTAC 1 cut(s) 1507
RsaNI GTAC 1 cut(s) 1506
RseI CAYNNNNRTG 3 cut(s) 38, 161, 848
SacI GAGCTC 1 cut(s) 1167
SaqAI TTAA 1 cut(s) 681
SatI GCNGC 8 cut(s) 93, 190, 193, 232, 240, 335, 619, 868
Sau3AI GATC 6 cut(s) 172, 369, 417, 1054, 1306, 1492
Sau96I GGNCC 5 cut(s) 411, 412, 534, 1150, 1301
SchI GAGTC 4 cut(s) 93, 1024, 1285, 1305
ScrFI CCNGG 4 cut(s) 409, 776, 1045, 1147
SduI GDGCHC 8 cut(s) 35, 415, 520, 648, 855, 1167, 1329, 1341
SfaNI GCATC 4 cut(s) 136, 142, 781, 1419
SfcI CTRYAG 1 cut(s) 187
SfoI GGCGCC 1 cut(s) 1247
SfuI TTCGAA 1 cut(s) 502
SinI GGWCC 2 cut(s) 1150, 1301
SmiMI CAYNNNNRTG 3 cut(s) 38, 161, 848
SpeI ACTAGT 1 cut(s) 1531
Sse9I AATT 6 cut(s) 395, 753, 1050, 1107, 1232, 1466
SseBI AGGCCT 1 cut(s) 600
SspDI GGCGCC 1 cut(s) 1245
SspI AATATT 1 cut(s) 1376
SspMI CTAG 1 cut(s) 1532
SstI GAGCTC 1 cut(s) 1167
StuI AGGCCT 1 cut(s) 600
StyD4I CCNGG 4 cut(s) 407, 774, 1043, 1145
StyI CCWWGG 4 cut(s) 595, 846, 1090, 1415
TaqI TCGA 5 cut(s) 365, 399, 420, 502, 1240
TaqII GACCGA 2 cut(s) 765, 1289
TasI AATT 6 cut(s) 395, 753, 1050, 1107, 1232, 1466
TatI WGTACW 1 cut(s) 1505
TauI GCSGC 4 cut(s) 95, 234, 621, 870
TfiI GAWTC 3 cut(s) 271, 299, 499
Tru1I TTAA 1 cut(s) 681
Tru9I TTAA 1 cut(s) 681
TscAI CASTG 2 cut(s) 233, 409
TseFI GTSAC 2 cut(s) 472, 1006
TseI GCWGC 4 cut(s) 189, 192, 239, 334
Tsp45I GTSAC 2 cut(s) 472, 1006
TspDTI ATGAA 7 cut(s) 438, 795, 887, 896, 983, 1193, 1403
TspGWI ACGGA 4 cut(s) 269, 337, 1121, 1559
TspRI CASTG 2 cut(s) 233, 409
VneI GTGCAC 1 cut(s) 31
VpaK11BI GGWCC 2 cut(s) 1150, 1301
XapI RAATTY 4 cut(s) 395, 753, 1232, 1466
XceI RCATGY 2 cut(s) 671, 1084
XcmI CCANNNNNNNNNTGG 1 cut(s) 1478
XspI CTAG 1 cut(s) 1532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.