Rh3DG372200

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0009369
Physical Location & Seq
Reverse (-)
47555317 .. 47560944
5628 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG372200.1

Sequence Viewer

Length: 1641 bp
ATGCGAAAAATGAGAAACATTAGCAGATTGAAGTGGTTGTGCACGATTATGGTTGAAAAACCCCATGGCGTGACGATTGGCATGAGGGTCAGAGTGGGAGCGGCTCAAACGCATTCCTTTACAACGGGAGCATACTGTGGGAAGTCAAGGGATGATGAGGATGCCATAAAAATGATTGTGGATCTGCGCTCATCCTGCAGCAGCGGGTGTGTGGAGCTGAAGAAGAAGCTGGAGCAGTGCGGCGTAGCAGCCTCAGCCTCAGCCTCACCGGAGCTGGTGGTGGAGATTCTTTCGCGTTTTCGCAACGATTGGGAATCGGCCTTCACCTTCTTCCTCTGGGCAGGAAAGCAGCGACCCCATTCCGTGCGTGAATACCACTCGATGATCTCCATTCTGGGGAAGATGAGGAAATTCGACACTGCCTGGGCCCTGATCGATGAAATGCGGAGCGGTTCGGGTTCGGGTTCGGCTTCTTCCCTCGTCACTCCTCAGACTCTGTTACTCATGATTCGAAAATACTCTTGTGCTCATGATGTTGGGAGGGCCATTCACACTTTCTACGCCTATAAGCGGTTTGCGTTTGAGGCCGGCATGGATGACTTCCACGGCCTTCTCTCCGCCCTCTGCCGCTACAAAAATGTCCCTGAAGCTGAGCACTTACTTTTCTGCAACTCACATGTCTTCCCATTTAACACCAAGAGCTTCAACATTATTCTCAACGGCTGGTCTAATATCATCGTTAGTCCCCGCCACGCCGACCGAATTTGGACCGAAATGACCAACCGGGGCGTCCCCCACGATGCCATTTCCTATTCATGTCTCATTTCTTGCCATTCCAAATCCTCCAATCTCACCAAGGTGCTCAACATCTTCCGCCGCATGAACAAAATGAATGTTGAGCCTGACACTAAGGTTTACAATGCCCTCATTTTCGCTCTTGGAAAAGCCGGTCTCTTCAAAGAAGCTACCAATCTCATGAAAACCATGCAAGAAAAGGGTCTTGCGCCCAACATTGTCACTTATAACTCCCTCATCAAGACTCTCTGCAAGGCCAGGGAAATTGATCAAGCTACACACATTCTCCATGACATGTTGCGCCATGGCCTTGTTCCAACAATTCGGACTTACCATGCCTTCTTCCGTGTTTTATCAACCGGGGACCAAGTGTTTGAGCTCTTGGAAAAGATGAAAAACACCGGTTGCCCTCCAAATACTGATACATACATAATGTTGATTCGGAAATTCTGTCGATGGTGCCAGCTTGATAATGTCTTCAAGATTTGGAGTCAGATGAGCGAGAATGGAGTCGGTCCTGATCGTAGCTCATATATTGTGCTCATACATGGGCTCTTTCTAAATGCCAAGCTGGAGGAAGCCCACAAATATTATATGGAGATGAAAGATAGACACTATTTGCCAGAACCAAGGACAGAAGAGATGCTTCAGGCATGGTTGTCTGGTAAGCAGACTTCCAAATTCCAAACAACAGATGGAGAAGTTGATCAAGTGGATTGTACTCAGCCAGCTACGAATACTAAACTAGTAATCCCCAAGAAATCTCCTCAGGAAAAAGATTTCCGTCGGCAACCTGAAAGTAGGAAAGTTGTAAGAGAGCGGGGTTTTTCGTTTTGGGAGCAGTAG

Protein Analysis

546

Amino Acids

62.5

Weight (kDa)

9.3

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 254 - 315 4.4e-07 Pentatricopeptide repeat domain
PPR_long PF17177 255 - 383 2.9e-12 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 267 - 312 1.8e-07 PPR repeat family
PPR_2 PF13041 301 - 350 2e-14 PPR repeat family
PPR_3 PF13812 306 - 348 3.2e-07 Pentatricopeptide repeat domain
PPR_3 PF13812 325 - 380 7.9e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 332 - 364 1.3e-09 PPR repeat
PPR_2 PF13041 336 - 383 8.4e-12 PPR repeat family
PPR_3 PF13812 360 - 413 7.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 387 - 417 1.1e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1023
AccB1I GGYRCC 1 cut(s) 1254
AccBSI CCGCTC 3 cut(s) 101, 450, 1615
AccII CGCG 1 cut(s) 295
AclWI GGATC 1 cut(s) 189
AcsI RAATTY 4 cut(s) 410, 762, 1241, 1475
AcuI CTGAAG 3 cut(s) 239, 666, 1427
AcyI GRCGYC 1 cut(s) 789
AfaI GTAC 1 cut(s) 1516
AfiI CCNNNNNNNGG 2 cut(s) 396, 570
AflIII ACRYGT 2 cut(s) 676, 1089
AgeI ACCGGT 1 cut(s) 1196
AgsI TTSAA 5 cut(s) 31, 56, 706, 958, 1276
AhlI ACTAGT 1 cut(s) 1540
AjnI CCWGG 2 cut(s) 422, 1052
AleI CACNNNNGTG 1 cut(s) 857
Alw21I GWGCWC 6 cut(s) 44, 529, 657, 864, 1176, 1338
Alw26I GTCTC 2 cut(s) 824, 956
Alw44I GTGCAC 1 cut(s) 40
AlwI GGATC 1 cut(s) 189
AlwNI CAGNNNCTG 1 cut(s) 496
AoxI GGCC 7 cut(s) 318, 426, 543, 585, 607, 1050, 1102
ApaI GGGCCC 1 cut(s) 430
ApaLI GTGCAC 1 cut(s) 40
ApeKI GCWGC 4 cut(s) 198, 201, 248, 349
ApoI RAATTY 4 cut(s) 410, 762, 1241, 1475
ArsI GACNNNNNNTTYG 2 cut(s) 1151, 1183
AsiGI ACCGGT 1 cut(s) 1196
AspLEI GCGC 3 cut(s) 189, 1006, 1098
AspS9I GGNCC 6 cut(s) 426, 427, 543, 768, 1159, 1310
AsuC2I CCSGG 2 cut(s) 785, 1156
AsuHPI GGTGA 3 cut(s) 258, 316, 844
AsuII TTCGAA 1 cut(s) 511
AvaII GGWCC 3 cut(s) 768, 1159, 1310
AxyI CCTNAGG 1 cut(s) 1563
BaeGI GKGCMC 2 cut(s) 44, 430
BanI GGYRCC 1 cut(s) 1254
BanII GRGCYC 3 cut(s) 430, 1176, 1350
BarI GAAGNNNNNNTAC 2 cut(s) 1453, 1485
BbsI GAAGAC 2 cut(s) 673, 1264
Bbv12I GWGCWC 6 cut(s) 44, 529, 657, 864, 1176, 1338
BbvCI CCTCAGC 2 cut(s) 253, 259
BbvI GCAGC 4 cut(s) 210, 213, 260, 361
BccI CCATC 2 cut(s) 1245, 1484
BceAI ACGGC 2 cut(s) 622, 736
BciT130I CCWGG 2 cut(s) 424, 1054
BclI TGATCA 2 cut(s) 1063, 1501
BcnI CCSGG 2 cut(s) 785, 1156
BcoDI GTCTC 2 cut(s) 824, 956
BcuI ACTAGT 1 cut(s) 1540
BfaI CTAG 1 cut(s) 1541
BfmI CTRYAG 1 cut(s) 196
BisI GCNGC 8 cut(s) 102, 199, 202, 241, 249, 350, 628, 877
BlpI GCTNAGC 1 cut(s) 651
BlsI GCNGC 8 cut(s) 103, 200, 203, 242, 250, 351, 629, 878
Bme1390I CCNGG 4 cut(s) 424, 785, 1054, 1156
Bme18I GGWCC 3 cut(s) 768, 1159, 1310
BmgT120I GGNCC 6 cut(s) 426, 427, 543, 768, 1159, 1310
BmiI GGNNCC 3 cut(s) 428, 1160, 1256
BmrFI CCNGG 4 cut(s) 424, 785, 1054, 1156
BmsI GCATC 3 cut(s) 151, 790, 1428
BpiI GAAGAC 2 cut(s) 673, 1264
BpmI CTGGAG 2 cut(s) 251, 1388
Bpu10I CCTNAGC 2 cut(s) 253, 259
Bpu1102I GCTNAGC 1 cut(s) 651
Bpu14I TTCGAA 1 cut(s) 511
BpuMI CCSGG 2 cut(s) 785, 1156
Bsa29I ATCGAT 1 cut(s) 435
BsaHI GRCGYC 1 cut(s) 789
BsaI GGTCTC 1 cut(s) 956
BsaJI CCNNGG 9 cut(s) 64, 423, 604, 784, 855, 1053, 1099, 1155, 1424
BsaWI WCCGGW 2 cut(s) 268, 1196
BsaXI ACNNNNNCTCC 2 cut(s) 1065, 1095
Bsc4I CCNNNNNNNGG 2 cut(s) 396, 570
Bse118I RCCGGY 3 cut(s) 587, 947, 1196
Bse21I CCTNAGG 1 cut(s) 1563
BseBI CCWGG 2 cut(s) 424, 1054
BseCI ATCGAT 1 cut(s) 435
BseDI CCNNGG 9 cut(s) 64, 423, 604, 784, 855, 1053, 1099, 1155, 1424
BseGI GGATG 4 cut(s) 157, 166, 191, 601
BseLI CCNNNNNNNGG 2 cut(s) 396, 570
BseMII CTCAG 6 cut(s) 267, 273, 503, 642, 1532, 1577
BseRI GAGGAG 2 cut(s) 477, 1551
BseSI GKGCMC 2 cut(s) 44, 430
BseXI GCAGC 4 cut(s) 210, 213, 260, 361
Bsh1236I CGCG 1 cut(s) 295
Bsh1285I CGRYCG 1 cut(s) 760
BshFI GGCC 7 cut(s) 320, 428, 545, 587, 609, 1052, 1104
BshNI GGYRCC 1 cut(s) 1254
BshTI ACCGGT 1 cut(s) 1196
BshVI ATCGAT 1 cut(s) 435
BsiEI CGRYCG 1 cut(s) 760
BsiHKAI GWGCWC 6 cut(s) 44, 529, 657, 864, 1176, 1338
BsiSI CCGG 6 cut(s) 269, 588, 784, 948, 1155, 1197
BslFI GGGAC 4 cut(s) 626, 729, 776, 1172
BslI CCNNNNNNNGG 2 cut(s) 396, 570
BsmAI GTCTC 2 cut(s) 824, 956
BsmFI GGGAC 4 cut(s) 626, 729, 776, 1172
BsmI GAATGC 1 cut(s) 112
BsnI GGCC 7 cut(s) 320, 428, 545, 587, 609, 1052, 1104
Bso31I GGTCTC 1 cut(s) 956
Bsp119I TTCGAA 1 cut(s) 511
Bsp120I GGGCCC 1 cut(s) 426
Bsp1286I GDGCHC 8 cut(s) 44, 430, 529, 657, 864, 1176, 1338, 1350
Bsp143I GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
Bsp1720I GCTNAGC 1 cut(s) 651
Bsp19I CCATGG 2 cut(s) 64, 1099
BspANI GGCC 7 cut(s) 320, 428, 545, 587, 609, 1052, 1104
BspCNI CTCAG 6 cut(s) 266, 272, 502, 643, 1531, 1576
BspDI ATCGAT 1 cut(s) 435
BspFNI CGCG 1 cut(s) 295
BspHI TCATGA 3 cut(s) 504, 529, 975
BspLI GGNNCC 3 cut(s) 428, 1160, 1256
BspMAI CTGCAG 1 cut(s) 200
BspPI GGATC 1 cut(s) 189
BspT104I TTCGAA 1 cut(s) 511
BspT107I GGYRCC 1 cut(s) 1254
BspTNI GGTCTC 1 cut(s) 956
BsrBI CCGCTC 3 cut(s) 101, 450, 1615
BsrFI RCCGGY 3 cut(s) 587, 947, 1196
BssAI RCCGGY 3 cut(s) 587, 947, 1196
BssECI CCNNGG 9 cut(s) 64, 423, 604, 784, 855, 1053, 1099, 1155, 1424
BssMI GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
BssNI GRCGYC 1 cut(s) 789
BssT1I CCWWGG 4 cut(s) 64, 855, 1099, 1424
Bst2UI CCWGG 2 cut(s) 424, 1054
Bst4CI ACNGT 1 cut(s) 137
Bst6I CTCTTC 2 cut(s) 959, 1428
BstACI GRCGYC 1 cut(s) 789
BstBI TTCGAA 1 cut(s) 511
BstC8I GCNNGC 3 cut(s) 589, 1259, 1524
BstDEI CTNAG 7 cut(s) 253, 259, 489, 651, 909, 1518, 1563
BstDSI CCRYGG 3 cut(s) 64, 604, 1099
BstF5I GGATG 4 cut(s) 157, 166, 191, 601
BstFNI CGCG 1 cut(s) 295
BstHHI GCGC 3 cut(s) 189, 1006, 1098
BstKTI GATC 6 cut(s) 184, 387, 435, 1066, 1318, 1504
BstMAI GTCTC 2 cut(s) 824, 956
BstMBI GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
BstMCI CGRYCG 1 cut(s) 760
BstMWI GCNNNNNNNGC 3 cut(s) 195, 254, 584
BstNI CCWGG 2 cut(s) 424, 1054
BstNSI RCATGY 2 cut(s) 680, 1093
BstSCI CCNGG 4 cut(s) 422, 783, 1052, 1154
BstSFI CTRYAG 1 cut(s) 196
BstSLI GKGCMC 2 cut(s) 44, 430
BstUI CGCG 1 cut(s) 295
BstV1I GCAGC 4 cut(s) 210, 213, 260, 361
BstV2I GAAGAC 2 cut(s) 673, 1264
BstX2I RGATCY 1 cut(s) 181
BstYI RGATCY 1 cut(s) 181
Bsu15I ATCGAT 1 cut(s) 435
Bsu36I CCTNAGG 1 cut(s) 1563
BsuRI GGCC 7 cut(s) 320, 428, 545, 587, 609, 1052, 1104
BsuTUI ATCGAT 1 cut(s) 435
BtgI CCRYGG 3 cut(s) 64, 604, 1099
BtsCI GGATG 4 cut(s) 157, 166, 191, 601
BtsI GCAGTG 2 cut(s) 242, 417
BtsIMutI CAGTG 2 cut(s) 242, 417
Cac8I GCNNGC 3 cut(s) 589, 1259, 1524
CaiI CAGNNNCTG 1 cut(s) 496
CciI TCATGA 3 cut(s) 504, 529, 975
CfoI GCGC 3 cut(s) 189, 1006, 1098
Cfr10I RCCGGY 3 cut(s) 587, 947, 1196
Cfr13I GGNCC 6 cut(s) 426, 427, 543, 768, 1159, 1310
ClaI ATCGAT 1 cut(s) 435
CseI GACGC 1 cut(s) 778
Csp6I GTAC 1 cut(s) 1515
CspAI ACCGGT 1 cut(s) 1196
CviQI GTAC 1 cut(s) 1515
DdeI CTNAG 7 cut(s) 253, 259, 489, 651, 909, 1518, 1563
DpnI GATC 6 cut(s) 183, 386, 434, 1065, 1317, 1503
DpnII GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
Eam1104I CTCTTC 2 cut(s) 959, 1428
EarI CTCTTC 2 cut(s) 959, 1428
EciI GGCGGA 2 cut(s) 607, 863
Ecl136II GAGCTC 1 cut(s) 1174
Eco130I CCWWGG 4 cut(s) 64, 855, 1099, 1424
Eco24I GRGCYC 3 cut(s) 430, 1176, 1350
Eco31I GGTCTC 1 cut(s) 956
Eco47I GGWCC 3 cut(s) 768, 1159, 1310
Eco53kI GAGCTC 1 cut(s) 1174
Eco57I CTGAAG 3 cut(s) 239, 666, 1427
Eco81I CCTNAGG 1 cut(s) 1563
EcoICRI GAGCTC 1 cut(s) 1174
EcoO109I RGGNCCY 1 cut(s) 427
EcoRII CCWGG 2 cut(s) 422, 1052
EcoT14I CCWWGG 4 cut(s) 64, 855, 1099, 1424
EcoT38I GRGCYC 3 cut(s) 430, 1176, 1350
ErhI CCWWGG 4 cut(s) 64, 855, 1099, 1424
FalI AAGNNNNNCTT 2 cut(s) 1425, 1457
FaqI GGGAC 4 cut(s) 626, 729, 776, 1172
FauI CCCGC 3 cut(s) 197, 755, 1608
FbaI TGATCA 2 cut(s) 1063, 1501
Fnu4HI GCNGC 8 cut(s) 102, 199, 202, 241, 249, 350, 628, 877
FokI GGATG 4 cut(s) 164, 173, 178, 608
FriOI GRGCYC 3 cut(s) 430, 1176, 1350
Fsp4HI GCNGC 8 cut(s) 102, 199, 202, 241, 249, 350, 628, 877
FspBI CTAG 1 cut(s) 1541
GlaI GCGC 3 cut(s) 188, 1005, 1097
GluI GCNGC 8 cut(s) 102, 199, 202, 241, 249, 350, 628, 877
GsuI CTGGAG 2 cut(s) 251, 1388
HaeIII GGCC 7 cut(s) 320, 428, 545, 587, 609, 1052, 1104
HapII CCGG 6 cut(s) 269, 588, 784, 948, 1155, 1197
HgaI GACGC 1 cut(s) 778
HhaI GCGC 3 cut(s) 189, 1006, 1098
Hin1I GRCGYC 1 cut(s) 789
Hin6I GCGC 3 cut(s) 187, 1004, 1096
HinP1I GCGC 3 cut(s) 187, 1004, 1096
HinfI GANTC 8 cut(s) 286, 314, 493, 508, 1039, 1234, 1285, 1305
HpaII CCGG 6 cut(s) 269, 588, 784, 948, 1155, 1197
HphI GGTGA 3 cut(s) 258, 316, 844
Hpy166II GTNNAC 2 cut(s) 42, 916
Hpy188I TCNGA 5 cut(s) 92, 492, 1122, 1239, 1290
Hpy188III TCNNGA 7 cut(s) 505, 530, 976, 1036, 1276, 1313, 1565
Hpy8I GTNNAC 2 cut(s) 42, 916
Hpy99I CGWCG 1 cut(s) 1584
HpyAV CCTTC 4 cut(s) 331, 337, 620, 1144
HpyCH4III ACNGT 1 cut(s) 137
HpyCH4V TGCA 5 cut(s) 42, 198, 669, 988, 1047
HpyF10VI GCNNNNNNNGC 3 cut(s) 195, 254, 584
HpyF3I CTNAG 7 cut(s) 253, 259, 489, 651, 909, 1518, 1563
Hsp92I GRCGYC 1 cut(s) 789
HspAI GCGC 3 cut(s) 187, 1004, 1096
KroI GCCGGC 1 cut(s) 587
KroNI GCCGGC 1 cut(s) 589
Ksp22I TGATCA 2 cut(s) 1063, 1501
Kzo9I GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
LmnI GCTCC 7 cut(s) 98, 128, 214, 232, 271, 447, 1633
Lsp1109I GCAGC 4 cut(s) 210, 213, 260, 361
LweI GCATC 3 cut(s) 151, 790, 1428
MaeI CTAG 1 cut(s) 1541
MaeIII GTNAC 4 cut(s) 70, 481, 498, 1015
MalI GATC 6 cut(s) 183, 386, 434, 1065, 1317, 1503
MbiI CCGCTC 3 cut(s) 101, 450, 1615
MboI GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
MflI RGATCY 1 cut(s) 181
MhlI GDGCHC 8 cut(s) 44, 430, 529, 657, 864, 1176, 1338, 1350
MluCI AATT 6 cut(s) 410, 762, 1059, 1116, 1241, 1475
MlyI GAGTC 4 cut(s) 487, 1033, 1294, 1314
MmeI TCCRAC 1 cut(s) 1136
MroNI GCCGGC 1 cut(s) 587
MseI TTAA 1 cut(s) 690
MslI CAYNNNNRTG 3 cut(s) 47, 170, 857
MspA1I CMGCKG 1 cut(s) 204
MspI CCGG 6 cut(s) 269, 588, 784, 948, 1155, 1197
MspR9I CCNGG 4 cut(s) 424, 785, 1054, 1156
Mva1269I GAATGC 1 cut(s) 112
MvaI CCWGG 2 cut(s) 424, 1054
MvnI CGCG 1 cut(s) 295
MwoI GCNNNNNNNGC 3 cut(s) 195, 254, 584
NaeI GCCGGC 1 cut(s) 589
NciI CCSGG 2 cut(s) 785, 1156
NcoI CCATGG 2 cut(s) 64, 1099
NdeII GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
NgoMIV GCCGGC 1 cut(s) 587
NlaIV GGNNCC 3 cut(s) 428, 1160, 1256
NmuCI GTSAC 3 cut(s) 70, 481, 1015
NspI RCATGY 2 cut(s) 680, 1093
NspV TTCGAA 1 cut(s) 511
OliI CACNNNNGTG 1 cut(s) 857
PagI TCATGA 3 cut(s) 504, 529, 975
PciI ACATGT 2 cut(s) 676, 1089
PctI GAATGC 1 cut(s) 112
PdiI GCCGGC 1 cut(s) 589
PfeI GAWTC 4 cut(s) 286, 314, 508, 1234
PinAI ACCGGT 1 cut(s) 1196
PkrI GCNGC 8 cut(s) 103, 200, 203, 242, 250, 351, 629, 878
PleI GAGTC 4 cut(s) 487, 1033, 1293, 1313
PpsI GAGTC 4 cut(s) 487, 1033, 1293, 1313
PscI ACATGT 2 cut(s) 676, 1089
PsiI TTATAA 1 cut(s) 1023
Psp124BI GAGCTC 1 cut(s) 1176
Psp6I CCWGG 2 cut(s) 422, 1052
PspGI CCWGG 2 cut(s) 422, 1052
PspN4I GGNNCC 3 cut(s) 428, 1160, 1256
PspOMI GGGCCC 1 cut(s) 426
PspPI GGNCC 6 cut(s) 426, 427, 543, 768, 1159, 1310
PstI CTGCAG 1 cut(s) 200
PstNI CAGNNNCTG 1 cut(s) 496
PsuI RGATCY 1 cut(s) 181
RsaI GTAC 1 cut(s) 1516
RsaNI GTAC 1 cut(s) 1515
RseI CAYNNNNRTG 3 cut(s) 47, 170, 857
SacI GAGCTC 1 cut(s) 1176
SaqAI TTAA 1 cut(s) 690
SatI GCNGC 8 cut(s) 102, 199, 202, 241, 249, 350, 628, 877
Sau3AI GATC 6 cut(s) 181, 384, 432, 1063, 1315, 1501
Sau96I GGNCC 6 cut(s) 426, 427, 543, 768, 1159, 1310
SchI GAGTC 4 cut(s) 487, 1033, 1294, 1314
ScrFI CCNGG 4 cut(s) 424, 785, 1054, 1156
SduI GDGCHC 8 cut(s) 44, 430, 529, 657, 864, 1176, 1338, 1350
SfaNI GCATC 3 cut(s) 151, 790, 1428
SfcI CTRYAG 1 cut(s) 196
SfuI TTCGAA 1 cut(s) 511
SinI GGWCC 3 cut(s) 768, 1159, 1310
SmiMI CAYNNNNRTG 3 cut(s) 47, 170, 857
SpeI ACTAGT 1 cut(s) 1540
Sse9I AATT 6 cut(s) 410, 762, 1059, 1116, 1241, 1475
SspI AATATT 1 cut(s) 1385
SspMI CTAG 1 cut(s) 1541
SstI GAGCTC 1 cut(s) 1176
StyD4I CCNGG 4 cut(s) 422, 783, 1052, 1154
StyI CCWWGG 4 cut(s) 64, 855, 1099, 1424
TaaI ACNGT 1 cut(s) 137
TaqI TCGA 5 cut(s) 380, 414, 435, 511, 1249
TaqII GACCGA 3 cut(s) 774, 785, 1298
TasI AATT 6 cut(s) 410, 762, 1059, 1116, 1241, 1475
TatI WGTACW 1 cut(s) 1514
TauI GCSGC 4 cut(s) 104, 243, 630, 879
TfiI GAWTC 4 cut(s) 286, 314, 508, 1234
Tru1I TTAA 1 cut(s) 690
Tru9I TTAA 1 cut(s) 690
TscAI CASTG 2 cut(s) 242, 424
TseFI GTSAC 3 cut(s) 70, 481, 1015
TseI GCWGC 4 cut(s) 198, 201, 248, 349
Tsp45I GTSAC 3 cut(s) 70, 481, 1015
TspDTI ATGAA 7 cut(s) 453, 804, 896, 905, 992, 1202, 1412
TspGWI ACGGA 3 cut(s) 352, 1130, 1568
TspRI CASTG 2 cut(s) 242, 424
VneI GTGCAC 1 cut(s) 40
VpaK11BI GGWCC 3 cut(s) 768, 1159, 1310
XapI RAATTY 4 cut(s) 410, 762, 1241, 1475
XceI RCATGY 2 cut(s) 680, 1093
XcmI CCANNNNNNNNNTGG 1 cut(s) 1487
XspI CTAG 1 cut(s) 1541
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.