Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007443

Physical Location & Seq

Genomic Coordinates Reverse (-)

4009718 .. 4013577

Gene Structure 3860 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ36199

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGCGACGCCATATCTCGGCTCCTGTACTCCACGCGCCTCCCAGTTCTCCTTACACAGGCACAGACACCGGTGCCCGATCCTTCTCGAGCAGGCGCGAACCGCGCCGTTCGCCGGAAACAGAGGAGTAACCTTGAAGGTCAGGGCGGCGTCTTCGGATGGCGGCGGAGACTCGTACCTCGGAATGTGGAAGAAGGCGATGGAGAACGAGAAGAAGGCCGTCAAGTTCCAGAAAATCGTCGAGAATTCAGCTCCGGCGGACAACGACGTCGCCGGCGAGAGCATTGCGGAGAATCTGGAGCATAAGAGCCAGGAGTTCGAGAAGATTCTGGAGGTTCCGAAGGAGGAGAGGGATCGGATTCAGCGAATGCAGGTCGTCGATAGGGCCGCGGCGGCGATCGCGGCGGCTCGCGCGCTTTTGAAAGAGAGCGGCTTGAAGAAGGAGTCCGGTTCCGGTGAGCCGGGTTCGGGTGGAGTGAGGACTGAACCGGATTTGGGTGGAGTGAGGACTGAACCGGATTTGAGTGGAGCAATTGAGGCTCCTGATGAAGGAATGCAGGATGGGAGTATATCTGTGCCTCAGTCAGAAGAAAGTTCAGGAACTTGGACTCCAGGTCCAGACTTTTGGTCCTGGACCCCGCCGAGTAGTGATAGTTCAGATGATATAATTGACTTGCAGGCAGCGAAAAAGCCTTCAGCAAATCCAAACTTGAGTTTGCCAGTGAAGGAGAAAGAGCGATCCTTGGATGTTCTCTCAATTCCCCTTCAGAGTATTCTGTCTGAAATTCCTCTTCCCCCTTTGCAATCACTGAAGGAGGTCAAGAAAGTGGATGTCGCTGAGTCCACTTCCACAAAAGAGGAACATGAACTTGGACATGAGTTTTCAGTACATGCAGCAGAAGCTGCTCGTGCTCTTGATAAGGCGGATCAGGAGTCATTATCTGGTGTGTATACGGATGGAGCTAGGTGGTGGAAGGAATCTGGAGTTGAGCAAAGGCCGGATGGCGTGACGTGCAGGTGGACAATGATCAGAGGTGTCAGTGCCGACCAAGTTACTGAGTGGCAAGATAAGTACTGGGAGGCTGCAGATGAGTTAGGCCACAAGGAGCTTGGTTCAGAAAAATCGGGACGTGACGCATACGGAAATGTTTGGCGTGAACATTGGAAAGAAGCTATGTGGCAGAATTGTGGGCTTGTGCATATGGAGAAATCTGCAGACAAGTGGGGAAAGAATGGTAGAGGTGATGAATGGCAAGAGAAATGGTGGGAGCATTATGATGCTTCAGGCCAAGCAGAGAAATGGGCTCATAAGTGGTGTACAATTGATCCAAACACACCAGTTGATGTTGGTCATGCTCACATTTGGCATGAAAGGTGGGGTGAAACATATGATGGACATGGTGGGAGTAATAAATACACTGATAAATGGGCTGAACGCTGCGAGGGAGATGGTTGGTCAAAATGGGGTGACAAATGGGATGAACATTTTGATCCAAATGGCCATGGTGTGAAGCAGGGTGAAACATGGTGGGAGGGCAAGTATGGAGAACGGTGGAACAAAACATGGGGCGAGGGCCACAATGGTTCAGGGTGGATTCACAAGTATGGGAAGAGCAGCAGCGGTGATCACTGGGATACACATGAGCAGGAAGACACCTGGTATGAGAGATTCCCTCACTTCGGTTTCTATCACTGCTTTGAAAACTCAGTTCAGCTCAGGGAAGTTCGAAAGCCATCAGAGATTGCATCGCAGATGTCTTCAGAGACTTCATCCGAGATGCCATCTGAGACTTCGTCGGAGATGCCTTCGTTAGAGATGCTTTCAGAGACTTCATCAGAGATGCCTCCAGAGACTTCATCTGAGATACCTTCAGAGACTTCATCGGAGATACCTTCAGAAATTCCATCGGACATGTCATCAGACAGTCCATTGGAGTTGCCCTCAGAGCTTCTATTGAAGAGACAATCAGAGGTGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

659

Amino Acids

73.79

Weight (kDa)

4.99

Isoelectric Point (pI)

48.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55760 AT3G55760 AT3G55760
fragaria_vesca	FvH4_4g01790 FvH4_4g01790
malus_domestica	MD13G1202100.v1.1 MD16G1202300.v1.1
prunus_persica	Prupe.1G023800_v2.0.a1
pyrus_communis	pycom16g17070
rosa_chinensis	RchiOBHm_Chr4g0388701 RchiOBHm_Chr4g0388821
rosa_laevigata	RLG00000010026
rosa_multiflora	Rmu_sc0000697.1_g000013 Rmu_sc0010392.1_g000002 Rmu_sc0016023.1_g000002
rosa_roxburghii	Rroxscaffold_5G00335100
rosa_rugosa	Rorug03G0320100
rosa_samantha	Rh4AG024100 Rh4AG024900 Rh4BG017900 Rh4CG026900 Rh4CG027600 Rh4DG018200
rosa_wichuraiana	Rw4G001740 Rw4G001780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1005
AasI	GACNNNNNNGTC	1 cut(s)	266
AatII	GACGTC	1 cut(s)	270
Acc36I	ACCTGC	2 cut(s)	361, 1005
AccB1I	GGYRCC	1 cut(s)	72
AccBSI	CCGCTC	1 cut(s)	429
AccI	GTMKAC	1 cut(s)	950
AccII	CGCG	7 cut(s)	36, 97, 104, 389, 401, 411, 413
AclWI	GGATC	6 cut(s)	73, 360, 732, 933, 1319, 1484
AcoI	YGGCCR	1 cut(s)	1498
AcsI	RAATTY	3 cut(s)	244, 783, 1899
AcuI	CTGAAG	7 cut(s)	678, 749, 830, 1266, 1743, 1854, 1878
AcyI	GRCGYC	3 cut(s)	8, 149, 267
AfaI	GTAC	5 cut(s)	28, 176, 888, 1073, 1318
AfiI	CCNNNNNNNGG	7 cut(s)	17, 57, 113, 467, 494, 548, 1679
AflIII	ACRYGT	1 cut(s)	1911
AgeI	ACCGGT	1 cut(s)	69
AgsI	TTSAA	5 cut(s)	136, 421, 436, 1700, 1957
AhdI	GACNNNNNGTC	2 cut(s)	612, 625
AjiI	CACGTC	2 cut(s)	1011, 1130
AjnI	CCWGG	4 cut(s)	309, 610, 629, 1655
AjuI	GAANNNNNNNTTGG	2 cut(s)	852, 884
AloI	GAACNNNNNNTCC	2 cut(s)	592, 624
AluBI	AGCT	7 cut(s)	251, 902, 962, 1108, 1172, 1714, 1948
AluI	AGCT	7 cut(s)	251, 902, 962, 1108, 1172, 1714, 1948
Alw21I	GWGCWC	1 cut(s)	913
Alw26I	GTCTC	7 cut(s)	162, 1757, 1781, 1820, 1844, 1868, 1954
AlwI	GGATC	6 cut(s)	73, 360, 732, 933, 1319, 1484
AlwNI	CAGNNNCTG	1 cut(s)	902
Ama87I	CYCGRG	1 cut(s)	86
AoxI	GGCC	8 cut(s)	216, 384, 995, 1096, 1285, 1498, 1573, 1974
ApeKI	GCWGC	7 cut(s)	680, 893, 902, 1082, 1437, 1614, 1617
ApoI	RAATTY	3 cut(s)	244, 783, 1899
AsiGI	ACCGGT	1 cut(s)	69
AsiSI	GCGATCGC	1 cut(s)	399
AspLEI	GCGC	5 cut(s)	38, 97, 106, 413, 415
AspS9I	GGNCC	5 cut(s)	384, 614, 627, 633, 1573
AsuC2I	CCSGG	1 cut(s)	462
AsuHPI	GGTGA	6 cut(s)	467, 1253, 1391, 1478, 1529, 1634
AsuII	TTCGAA	1 cut(s)	1726
AvaI	CYCGRG	1 cut(s)	86
AvaII	GGWCC	3 cut(s)	614, 627, 633
BaeGI	GKGCMC	1 cut(s)	77
BalI	TGGCCA	1 cut(s)	1500
BanI	GGYRCC	1 cut(s)	72
BanII	GRGCYC	1 cut(s)	1306
BauI	CACGAG	1 cut(s)	906
BbsI	GAAGAC	3 cut(s)	144, 1656, 1749
Bbv12I	GWGCWC	1 cut(s)	913
BbvI	GCAGC	7 cut(s)	692, 889, 905, 1069, 1424, 1626, 1629
BceAI	ACGGC	2 cut(s)	91, 203
BcgI	CGANNNNNNTGC	2 cut(s)	266, 300
BciT130I	CCWGG	4 cut(s)	311, 612, 631, 1657
BciVI	GTATCC	1 cut(s)	1627
BclI	TGATCA	2 cut(s)	1026, 1624
BcnI	CCSGG	1 cut(s)	462
BcoDI	GTCTC	7 cut(s)	162, 1757, 1781, 1820, 1844, 1868, 1954
BfaI	CTAG	1 cut(s)	963
BfmI	CTRYAG	2 cut(s)	1083, 1212
BfuAI	ACCTGC	2 cut(s)	361, 1005
BfuI	GTATCC	1 cut(s)	1627
BglI	GCCNNNNNGGC	1 cut(s)	392
BmcAI	AGTACT	1 cut(s)	1073
Bme1390I	CCNGG	5 cut(s)	311, 462, 612, 631, 1657
Bme18I	GGWCC	3 cut(s)	614, 627, 633
BmeRI	GACNNNNNGTC	2 cut(s)	612, 625
BmeT110I	CYCGRG	1 cut(s)	86
BmgBI	CACGTC	2 cut(s)	1011, 1130
BmgT120I	GGNCC	5 cut(s)	384, 614, 627, 633, 1573
BmiI	GGNNCC	6 cut(s)	22, 74, 336, 451, 540, 635
BmrFI	CCNGG	5 cut(s)	311, 462, 612, 631, 1657
BmrI	ACTGGG	3 cut(s)	37, 1084, 1639
BmsI	GCATC	6 cut(s)	1267, 1754, 1767, 1791, 1806, 1830
BmuI	ACTGGG	3 cut(s)	37, 1084, 1639
BpiI	GAAGAC	3 cut(s)	144, 1656, 1749
BplI	GAGNNNNNCTC	4 cut(s)	1657, 1689, 1925, 1957
BpmI	CTGGAG	5 cut(s)	317, 350, 594, 1002, 1830
Bpu10I	CCTNAGC	1 cut(s)	1715
Bpu14I	TTCGAA	1 cut(s)	1726
BpuEI	CTTGAG	1 cut(s)	730
BpuMI	CCSGG	1 cut(s)	462
BsaHI	GRCGYC	3 cut(s)	8, 149, 267
BsaJI	CCNNGG	4 cut(s)	178, 387, 741, 1501
BsaWI	WCCGGW	5 cut(s)	69, 446, 452, 487, 514
BsaXI	ACNNNNNCTCC	4 cut(s)	592, 622, 1523, 1553
Bsc4I	CCNNNNNNNGG	7 cut(s)	17, 57, 113, 467, 494, 548, 1679
Bse118I	RCCGGY	2 cut(s)	69, 272
Bse1I	ACTGG	5 cut(s)	43, 719, 1079, 1337, 1634
Bse3DI	GCAATG	1 cut(s)	282
BseBI	CCWGG	4 cut(s)	311, 612, 631, 1657
BseDI	CCNNGG	4 cut(s)	178, 387, 741, 1501
BseGI	GGATG	8 cut(s)	163, 565, 751, 835, 961, 1006, 1483, 1769
BseLI	CCNNNNNNNGG	7 cut(s)	17, 57, 113, 467, 494, 548, 1679
BseMI	GCAATG	1 cut(s)	282
BseMII	CTCAG	8 cut(s)	593, 828, 1047, 1719, 1729, 1776, 1851, 1956
BseNI	ACTGG	5 cut(s)	43, 719, 1079, 1337, 1634
BsePI	GCGCGC	1 cut(s)	411
BseRI	GAGGAG	2 cut(s)	138, 359
BseSI	GKGCMC	1 cut(s)	77
BseXI	GCAGC	7 cut(s)	692, 889, 905, 1069, 1424, 1626, 1629
BsgI	GTGCAG	1 cut(s)	1033
Bsh1236I	CGCG	7 cut(s)	36, 97, 104, 389, 401, 411, 413
Bsh1285I	CGRYCG	1 cut(s)	399
BshFI	GGCC	8 cut(s)	218, 386, 997, 1098, 1287, 1500, 1575, 1976
BshNI	GGYRCC	1 cut(s)	72
BshTI	ACCGGT	1 cut(s)	69
BsiEI	CGRYCG	1 cut(s)	399
BsiHKAI	GWGCWC	1 cut(s)	913
BsiHKCI	CYCGRG	1 cut(s)	86
BslFI	GGGAC	1 cut(s)	1140
BslI	CCNNNNNNNGG	7 cut(s)	17, 57, 113, 467, 494, 548, 1679
BsmAI	GTCTC	7 cut(s)	162, 1757, 1781, 1820, 1844, 1868, 1954
BsmFI	GGGAC	1 cut(s)	1140
BsmI	GAATGC	2 cut(s)	372, 558
BsnI	GGCC	8 cut(s)	218, 386, 997, 1098, 1287, 1500, 1575, 1976
BsoBI	CYCGRG	1 cut(s)	86
Bsp119I	TTCGAA	1 cut(s)	1726
Bsp1286I	GDGCHC	3 cut(s)	77, 913, 1306
Bsp1407I	TGTACA	1 cut(s)	1316
Bsp143I	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
Bsp19I	CCATGG	1 cut(s)	1501
BspANI	GGCC	8 cut(s)	218, 386, 997, 1098, 1287, 1500, 1575, 1976
BspCNI	CTCAG	8 cut(s)	592, 829, 1048, 1718, 1728, 1777, 1852, 1955
BspFNI	CGCG	7 cut(s)	36, 97, 104, 389, 401, 411, 413
BspLI	GGNNCC	6 cut(s)	22, 74, 336, 451, 540, 635
BspMAI	CTGCAG	2 cut(s)	1087, 1216
BspMI	ACCTGC	2 cut(s)	361, 1005
BspPI	GGATC	6 cut(s)	73, 360, 732, 933, 1319, 1484
BspQI	GCTCTTC	1 cut(s)	1604
BspT104I	TTCGAA	1 cut(s)	1726
BspT107I	GGYRCC	1 cut(s)	72
BsrBI	CCGCTC	1 cut(s)	429
BsrDI	GCAATG	1 cut(s)	282
BsrFI	RCCGGY	2 cut(s)	69, 272
BsrGI	TGTACA	1 cut(s)	1316
BsrI	ACTGG	5 cut(s)	43, 719, 1079, 1337, 1634
BssAI	RCCGGY	2 cut(s)	69, 272
BssECI	CCNNGG	4 cut(s)	178, 387, 741, 1501
BssHII	GCGCGC	1 cut(s)	411
BssMI	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
BssNAI	GTATAC	1 cut(s)	951
BssNI	GRCGYC	3 cut(s)	8, 149, 267
BssSI	CACGAG	1 cut(s)	906
BssT1I	CCWWGG	2 cut(s)	741, 1501
Bst1107I	GTATAC	1 cut(s)	951
Bst2BI	CACGAG	1 cut(s)	906
Bst2UI	CCWGG	4 cut(s)	311, 612, 631, 1657
Bst4CI	ACNGT	2 cut(s)	1551, 1925
Bst6I	CTCTTC	3 cut(s)	795, 1604, 1952
BstACI	GRCGYC	3 cut(s)	8, 149, 267
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstAUI	TGTACA	1 cut(s)	1316
BstBI	TTCGAA	1 cut(s)	1726
BstC8I	GCNNGC	5 cut(s)	93, 274, 409, 413, 678
BstDEI	CTNAG	8 cut(s)	579, 837, 1056, 1705, 1715, 1785, 1860, 1942
BstDSI	CCRYGG	2 cut(s)	387, 1501
BstENI	CCTNNNNNAGG	2 cut(s)	55, 546
BstF5I	GGATG	8 cut(s)	163, 565, 751, 835, 961, 1006, 1483, 1769
BstFNI	CGCG	7 cut(s)	36, 97, 104, 389, 401, 411, 413
BstHHI	GCGC	5 cut(s)	38, 97, 106, 413, 415
BstKTI	GATC	9 cut(s)	81, 355, 399, 740, 928, 1029, 1327, 1492, 1627
BstMAI	GTCTC	7 cut(s)	162, 1757, 1781, 1820, 1844, 1868, 1954
BstMBI	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
BstMCI	CGRYCG	1 cut(s)	399
BstNI	CCWGG	4 cut(s)	311, 612, 631, 1657
BstNSI	RCATGY	2 cut(s)	893, 1915
BstSCI	CCNGG	5 cut(s)	309, 460, 610, 629, 1655
BstSFI	CTRYAG	2 cut(s)	1083, 1212
BstSLI	GKGCMC	1 cut(s)	77
BstUI	CGCG	7 cut(s)	36, 97, 104, 389, 401, 411, 413
BstV1I	GCAGC	7 cut(s)	692, 889, 905, 1069, 1424, 1626, 1629
BstV2I	GAAGAC	3 cut(s)	144, 1656, 1749
BstXI	CCANNNNNNTGG	1 cut(s)	624
BstZ17I	GTATAC	1 cut(s)	951
BsuI	GTATCC	1 cut(s)	1627
BsuRI	GGCC	8 cut(s)	218, 386, 997, 1098, 1287, 1500, 1575, 1976
BtgI	CCRYGG	2 cut(s)	387, 1501
BtgZI	GCGATG	2 cut(s)	212, 1731
BtrI	CACGTC	2 cut(s)	1011, 1130
BtsCI	GGATG	8 cut(s)	163, 565, 751, 835, 961, 1006, 1483, 1769
BtsI	GCAGTG	1 cut(s)	1690
BtsIMutI	CAGTG	6 cut(s)	726, 806, 1045, 1416, 1627, 1690
BveI	ACCTGC	2 cut(s)	361, 1005
Cac8I	GCNNGC	5 cut(s)	93, 274, 409, 413, 678
CaiI	CAGNNNCTG	1 cut(s)	902
CfoI	GCGC	5 cut(s)	38, 97, 106, 413, 415
Cfr10I	RCCGGY	2 cut(s)	69, 272
Cfr13I	GGNCC	5 cut(s)	384, 614, 627, 633, 1573
Cfr42I	CCGCGG	1 cut(s)	390
CseI	GACGC	3 cut(s)	16, 138, 1142
CsiI	ACCWGGT	1 cut(s)	1655
Csp6I	GTAC	5 cut(s)	27, 175, 887, 1072, 1317
CspAI	ACCGGT	1 cut(s)	69
CviQI	GTAC	5 cut(s)	27, 175, 887, 1072, 1317
DdeI	CTNAG	8 cut(s)	579, 837, 1056, 1705, 1715, 1785, 1860, 1942
DpnI	GATC	9 cut(s)	80, 354, 398, 739, 927, 1028, 1326, 1491, 1626
DpnII	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
DrdI	GACNNNNNNGTC	1 cut(s)	266
DriI	GACNNNNNGTC	2 cut(s)	612, 625
DseDI	GACNNNNNNGTC	1 cut(s)	266
EaeI	YGGCCR	1 cut(s)	1498
Eam1104I	CTCTTC	3 cut(s)	795, 1604, 1952
Eam1105I	GACNNNNNGTC	2 cut(s)	612, 625
EarI	CTCTTC	3 cut(s)	795, 1604, 1952
EciI	GGCGGA	3 cut(s)	180, 272, 938
Eco130I	CCWWGG	2 cut(s)	741, 1501
Eco24I	GRGCYC	1 cut(s)	1306
Eco47I	GGWCC	3 cut(s)	614, 627, 633
Eco57I	CTGAAG	7 cut(s)	678, 749, 830, 1266, 1743, 1854, 1878
Eco88I	CYCGRG	1 cut(s)	86
EcoNI	CCTNNNNNAGG	2 cut(s)	55, 546
EcoRI	GAATTC	1 cut(s)	244
EcoRII	CCWGG	4 cut(s)	309, 610, 629, 1655
EcoT14I	CCWWGG	2 cut(s)	741, 1501
EcoT38I	GRGCYC	1 cut(s)	1306
ErhI	CCWWGG	2 cut(s)	741, 1501
FaqI	GGGAC	1 cut(s)	1140
FauI	CCCGC	1 cut(s)	645
FauNDI	CATATG	2 cut(s)	1200, 1387
FbaI	TGATCA	2 cut(s)	1026, 1624
FblI	GTMKAC	1 cut(s)	950
FokI	GGATG	8 cut(s)	170, 572, 758, 842, 968, 1013, 1490, 1756
FriOI	GRGCYC	1 cut(s)	1306
FspBI	CTAG	1 cut(s)	963
GlaI	GCGC	5 cut(s)	37, 96, 105, 412, 414
GsuI	CTGGAG	5 cut(s)	317, 350, 594, 1002, 1830
HaeIII	GGCC	8 cut(s)	218, 386, 997, 1098, 1287, 1500, 1575, 1976
HgaI	GACGC	3 cut(s)	16, 138, 1142
HhaI	GCGC	5 cut(s)	38, 97, 106, 413, 415
Hin1I	GRCGYC	3 cut(s)	8, 149, 267
Hin6I	GCGC	5 cut(s)	36, 95, 104, 411, 413
HinP1I	GCGC	5 cut(s)	36, 95, 104, 411, 413
HphI	GGTGA	6 cut(s)	467, 1253, 1391, 1478, 1529, 1634
Hpy166II	GTNNAC	5 cut(s)	843, 951, 1020, 1157, 1317
Hpy8I	GTNNAC	5 cut(s)	843, 951, 1020, 1157, 1317
Hpy99I	CGWCG	6 cut(s)	10, 242, 269, 272, 380, 1798
HpyCH4III	ACNGT	2 cut(s)	1551, 1925
HpyCH4IV	ACGT	3 cut(s)	267, 1010, 1129
HpyF3I	CTNAG	8 cut(s)	579, 837, 1056, 1705, 1715, 1785, 1860, 1942
HpySE526I	ACGT	3 cut(s)	267, 1010, 1129
Hsp92I	GRCGYC	3 cut(s)	8, 149, 267
HspAI	GCGC	5 cut(s)	36, 95, 104, 411, 413
KroI	GCCGGC	1 cut(s)	272
KroNI	GCCGGC	1 cut(s)	274
Ksp22I	TGATCA	2 cut(s)	1026, 1624
KspI	CCGCGG	1 cut(s)	390
Kzo9I	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
LguI	GCTCTTC	1 cut(s)	1604
LmnI	GCTCC	8 cut(s)	26, 256, 298, 527, 544, 959, 1105, 1267
Lsp1109I	GCAGC	7 cut(s)	692, 889, 905, 1069, 1424, 1626, 1629
LweI	GCATC	6 cut(s)	1267, 1754, 1767, 1791, 1806, 1830
MabI	ACCWGGT	1 cut(s)	1655
MaeI	CTAG	1 cut(s)	963
MaeII	ACGT	3 cut(s)	267, 1010, 1129
MaeIII	GTNAC	5 cut(s)	127, 1006, 1051, 1130, 1466
MalI	GATC	9 cut(s)	80, 354, 398, 739, 927, 1028, 1326, 1491, 1626
MbiI	CCGCTC	1 cut(s)	429
MboI	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
MfeI	CAATTG	2 cut(s)	531, 1320
MhlI	GDGCHC	3 cut(s)	77, 913, 1306
MlsI	TGGCCA	1 cut(s)	1500
MluCI	AATT	8 cut(s)	244, 531, 666, 756, 783, 1183, 1320, 1899
MluNI	TGGCCA	1 cut(s)	1500
MlyI	GAGTC	5 cut(s)	164, 452, 601, 848, 941
MmeI	TCCRAC	1 cut(s)	1776
Mox20I	TGGCCA	1 cut(s)	1500
MreI	CGCCGGCG	1 cut(s)	272
MroNI	GCCGGC	1 cut(s)	272
MscI	TGGCCA	1 cut(s)	1500
MslI	CAYNNNNRTG	2 cut(s)	1275, 1602
Msp20I	TGGCCA	1 cut(s)	1500
MspA1I	CMGCKG	2 cut(s)	389, 1620
MspR9I	CCNGG	5 cut(s)	311, 462, 612, 631, 1657
MunI	CAATTG	2 cut(s)	531, 1320
Mva1269I	GAATGC	2 cut(s)	372, 558
MvaI	CCWGG	4 cut(s)	311, 612, 631, 1657
MvnI	CGCG	7 cut(s)	36, 97, 104, 389, 401, 411, 413
NaeI	GCCGGC	1 cut(s)	274
NciI	CCSGG	1 cut(s)	462
NcoI	CCATGG	1 cut(s)	1501
NdeI	CATATG	2 cut(s)	1200, 1387
NdeII	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
NgoMIV	GCCGGC	1 cut(s)	272
NlaIV	GGNNCC	6 cut(s)	22, 74, 336, 451, 540, 635
NmeAIII	GCCGAG	1 cut(s)	666
NmuCI	GTSAC	3 cut(s)	1006, 1130, 1466
NspI	RCATGY	2 cut(s)	893, 1915
NspV	TTCGAA	1 cut(s)	1726
PaeR7I	CTCGAG	1 cut(s)	86
PaqCI	CACCTGC	1 cut(s)	1005
PauI	GCGCGC	1 cut(s)	411
PciI	ACATGT	1 cut(s)	1911
PciSI	GCTCTTC	1 cut(s)	1604
PcsI	WCGNNNNNNNCGW	2 cut(s)	273, 361
PctI	GAATGC	2 cut(s)	372, 558
PdiI	GCCGGC	1 cut(s)	274
PfeI	GAWTC	6 cut(s)	292, 325, 358, 977, 1594, 1668
PflFI	GACNNNGTC	1 cut(s)	1792
PfoI	TCCNGGA	1 cut(s)	629
PinAI	ACCGGT	1 cut(s)	69
Ple19I	CGATCG	1 cut(s)	399
PleI	GAGTC	5 cut(s)	164, 451, 601, 847, 940
PpsI	GAGTC	5 cut(s)	164, 451, 601, 847, 940
PscI	ACATGT	1 cut(s)	1911
Psp6I	CCWGG	4 cut(s)	309, 610, 629, 1655
PspGI	CCWGG	4 cut(s)	309, 610, 629, 1655
PspN4I	GGNNCC	6 cut(s)	22, 74, 336, 451, 540, 635
PspPI	GGNCC	5 cut(s)	384, 614, 627, 633, 1573
PsrI	GAACNNNNNNTAC	2 cut(s)	637, 669
PstI	CTGCAG	2 cut(s)	1087, 1216
PstNI	CAGNNNCTG	1 cut(s)	902
PsyI	GACNNNGTC	1 cut(s)	1792
PteI	GCGCGC	1 cut(s)	411
PvuI	CGATCG	1 cut(s)	399
RgaI	GCGATCGC	1 cut(s)	399
RsaI	GTAC	5 cut(s)	28, 176, 888, 1073, 1318
RsaNI	GTAC	5 cut(s)	27, 175, 887, 1072, 1317
RseI	CAYNNNNRTG	2 cut(s)	1275, 1602
SacII	CCGCGG	1 cut(s)	390
SapI	GCTCTTC	1 cut(s)	1604
Sau3AI	GATC	9 cut(s)	78, 352, 396, 737, 925, 1026, 1324, 1489, 1624
Sau96I	GGNCC	5 cut(s)	384, 614, 627, 633, 1573
ScaI	AGTACT	1 cut(s)	1073
SchI	GAGTC	5 cut(s)	164, 452, 601, 848, 941
ScrFI	CCNGG	5 cut(s)	311, 462, 612, 631, 1657
SduI	GDGCHC	3 cut(s)	77, 913, 1306
SexAI	ACCWGGT	1 cut(s)	1655
SfaAI	GCGATCGC	1 cut(s)	399
SfaNI	GCATC	6 cut(s)	1267, 1754, 1767, 1791, 1806, 1830
SfcI	CTRYAG	2 cut(s)	1083, 1212
Sfr274I	CTCGAG	1 cut(s)	86
Sfr303I	CCGCGG	1 cut(s)	390
SfuI	TTCGAA	1 cut(s)	1726
SgfI	GCGATCGC	1 cut(s)	399
SgrAI	CRCCGGYG	2 cut(s)	69, 272
SgrBI	CCGCGG	1 cut(s)	390
SinI	GGWCC	3 cut(s)	614, 627, 633
SlaI	CTCGAG	1 cut(s)	86
SmiMI	CAYNNNNRTG	2 cut(s)	1275, 1602
SmlI	CTYRAG	2 cut(s)	86, 709
SmoI	CTYRAG	2 cut(s)	86, 709
Sse9I	AATT	8 cut(s)	244, 531, 666, 756, 783, 1183, 1320, 1899
SspMI	CTAG	1 cut(s)	963
StyD4I	CCNGG	5 cut(s)	309, 460, 610, 629, 1655
StyI	CCWWGG	2 cut(s)	741, 1501
TaaI	ACNGT	2 cut(s)	1551, 1925
TaiI	ACGT	3 cut(s)	270, 1013, 1132
TaqI	TCGA	5 cut(s)	87, 240, 318, 378, 1726
TasI	AATT	8 cut(s)	244, 531, 666, 756, 783, 1183, 1320, 1899
TatI	WGTACW	4 cut(s)	26, 886, 1071, 1316
TauI	GCSGC	8 cut(s)	149, 165, 389, 392, 395, 404, 407, 432
TfiI	GAWTC	6 cut(s)	292, 325, 358, 977, 1594, 1668
TscAI	CASTG	6 cut(s)	726, 813, 1045, 1423, 1634, 1697
TseFI	GTSAC	3 cut(s)	1006, 1130, 1466
TseI	GCWGC	7 cut(s)	680, 893, 902, 1082, 1437, 1614, 1617
Tsp45I	GTSAC	3 cut(s)	1006, 1130, 1466
TspDTI	ATGAA	9 cut(s)	561, 879, 1260, 1383, 1494, 1758, 1821, 1845, 1869
TspGWI	ACGGA	2 cut(s)	968, 1155
TspRI	CASTG	6 cut(s)	726, 813, 1045, 1423, 1634, 1697
Tth111I	GACNNNGTC	1 cut(s)	1792
VpaK11BI	GGWCC	3 cut(s)	614, 627, 633
XagI	CCTNNNNNAGG	2 cut(s)	55, 546
XapI	RAATTY	3 cut(s)	244, 783, 1899
XceI	RCATGY	2 cut(s)	893, 1915
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1106
XhoI	CTCGAG	1 cut(s)	86
XmiI	GTMKAC	1 cut(s)	950
XspI	CTAG	1 cut(s)	963
ZraI	GACGTC	1 cut(s)	268
ZrmI	AGTACT	1 cut(s)	1073

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.