Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0007443

Physical Location & Seq

Genomic Coordinates Reverse (-)

3216081 .. 3219907

Gene Structure 3827 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G001740.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGCGTCGTCTTATCTCGGCGCCTGTACTCCACGCGCCTCCCAGTTCTCCTTACACAGGCACAGACACCGATGCCCGATCCCTCTCGAGCAGGCGCGAACCGCGCCGTTGGCCGGAAACAGAGGAGTTAGCTTGAAGAAAATCGTCGAGAATTCAGCTCCGGCGGACAACGAAGTCGCCGGCGCCGGCGAGAGCATTGAGGAGAATCTGGAGCATAAGAGCCAGGAGTTCGAGAGGATTCTGGAGGTTCCGAAGGAGGAGAGGGATCGGATTCAGCGAATGCAGGTCGTCGATAGGGAGCGGCGGCTCGAAGAGAGCGGCTTGAAGAAGGAGTCCCGTTCCAGTGAGCCGGGTTCGGGTGGAGTGAGGACTGAACCGGATTTGGGTGGAGTGAGGACTGAGCCGGATTTGAGTGGAGCAATTGAGGCTCCTGATGAAGGAATGCAGGATGGGAGTATATCTGTGCCTCAGTCAGAAGAAAGTTCAGGAACTTGGACTCCAGGTCCAGACTTTTGGTCCTGGACCCCGCCGAGTAGTGATAGTTCAGATGATATAATTGACTTGCAGGCAGCGAAAAAGCCTTCAGCAAATCCAAACTTGAGTTTTCCAGTGAAGGAGAAAGAGCGATCCTTGGATGTTCTCTCAATTCCCCTTCAGAGTAATCTGTCTGAAATTCCTCTTCCCCCTTTGCAATCACTGAAGGAGGTCGAGAAAGTGGATGTCGCTGAGTCCACTTCCACAAAAGAGGAACATGAACTTGGACATGAGTTTTCAGTACATGCAGCAGAAGCTGCTCGTGCTCTTGATAAGGCGGATCAGGAGTCATTATCTGGTGTGTATACGGATGGAGCTAGGTGGTGGAAGGAATCTGGAGTTGAGCAAAGGCCTGATGGCGTGACGTGCAGGTGGACAATGATCAGAGGTGTCAGTGCCGACCAAGTTACTGAGTGGCAAGATAAGTACTGGGAGGCTGCCGATGAGTTAGGCCACAAGGAGCTTGGTTCAGAAAAATCGGGACGTGACGCATACGGAAATGTTTGGCGTGAACATTGGAAAGAAGCTATGTGGCAGAATTGTGGGCTTGTGCATATGGAGAAATCTGCAGACAAGTGGGGAAAGAATGGTAGAGGTGATGAATGGCAAGAGAAATGGTGGGAGCATTATGATGCTTCAGGCCAAGCAGAGAAATGGGCTCATAAGTGGTGTACAATTGATCCAAACACACCAGTTGATGTTGGTCATGCTCACATTTGGCATGAAAGGTGGGGTGAAACATATGATGGACATGGTGGGAGTAATAAATACACTGACAAATGGGCTGAACGCTGCGAGGGAGATGGTTGGTCAAAATGGGGTGACAAATGGGATGAACATTTTGATCCAAATGGCCATGGTGTGAAGCAGGGTGAAACATGGTGGGAAGGCAAGTATGGAGAACGGTGGAACAAAACATGGGGCGAGGGCCACAATGGTTCAGGGTGGATTCACAAGTATGGGAAGAGCAGCAGCGGTGATCACTGGGATACACATGAGCAGGAAGACACCTGGTATGAGAGATTCCCTCACTTCGGTTTCTATCACTGCTTTGAAAACTCAGTTCAGCTCAGGGAAGTTCGAAAGCCATCAGAGATTGCATCGCAGATGTCTTCAGAGACTTCATCCGAGATGCCTTCTGAGACTTCGTCGGAGATGCCTTCATCAGAGATGCTTTCAGAGACTTCATCAGAGATGCCTCCAGAGACTTCATCTGAGATACCTTCAGAGACTTCATCAGAGATACCTTCAGAAATTCCATCGGACATGTCATCCAACGGTCCATTGGAGTTGCCCTCAGAGCTTCTATTGAAGAGACAATCAGAGGTGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

622

Amino Acids

70.14

Weight (kDa)

4.89

Isoelectric Point (pI)

53.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55760 AT3G55760 AT3G55760
fragaria_vesca	FvH4_4g01790 FvH4_4g01790
malus_domestica	MD13G1202100.v1.1 MD16G1202300.v1.1
prunus_persica	Prupe.1G023800_v2.0.a1
pyrus_communis	pycom16g17070
rosa_chinensis	RchiOBHm_Chr4g0388701 RchiOBHm_Chr4g0388821
rosa_laevigata	RLG00000010026
rosa_multiflora	Rmu_sc0000697.1_g000013 Rmu_sc0010392.1_g000002 Rmu_sc0016023.1_g000002
rosa_roxburghii	Rroxscaffold_5G00335100
rosa_rugosa	Rorug03G0320100
rosa_samantha	Rh4AG024100 Rh4AG024900 Rh4BG017900 Rh4CG026900 Rh4CG027600 Rh4DG018200
rosa_wichuraiana	Rw4G001740 Rw4G001780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	894
AasI	GACNNNNNNGTC	1 cut(s)	173
Acc36I	ACCTGC	2 cut(s)	274, 894
AccB1I	GGYRCC	2 cut(s)	20, 182
AccBSI	CCGCTC	2 cut(s)	301, 318
AccI	GTMKAC	1 cut(s)	839
AccII	CGCG	3 cut(s)	36, 97, 104
AciI	CCGC	8 cut(s)	102, 164, 301, 304, 318, 527, 812, 1509
AclWI	GGATC	6 cut(s)	73, 273, 621, 822, 1208, 1373
AcoI	YGGCCR	2 cut(s)	111, 1387
AcsI	RAATTY	3 cut(s)	151, 672, 1788
AcuI	CTGAAG	7 cut(s)	567, 638, 719, 1155, 1632, 1743, 1767
AcyI	GRCGYC	3 cut(s)	5, 21, 183
AfaI	GTAC	4 cut(s)	28, 777, 962, 1207
AfiI	CCNNNNNNNGG	6 cut(s)	57, 113, 356, 383, 437, 1568
AflIII	ACRYGT	1 cut(s)	1800
AgsI	TTSAA	4 cut(s)	136, 325, 1589, 1846
AhdI	GACNNNNNGTC	2 cut(s)	501, 514
AjiI	CACGTC	2 cut(s)	900, 1019
AjnI	CCWGG	4 cut(s)	222, 499, 518, 1544
AjuI	GAANNNNNNNTTGG	2 cut(s)	741, 773
AloI	GAACNNNNNNTCC	2 cut(s)	481, 513
AluBI	AGCT	8 cut(s)	132, 158, 791, 851, 997, 1061, 1603, 1837
AluI	AGCT	8 cut(s)	132, 158, 791, 851, 997, 1061, 1603, 1837
Alw21I	GWGCWC	1 cut(s)	802
Alw26I	GTCTC	6 cut(s)	1646, 1670, 1709, 1733, 1757, 1843
AlwI	GGATC	6 cut(s)	73, 273, 621, 822, 1208, 1373
AlwNI	CAGNNNCTG	1 cut(s)	791
Ama87I	CYCGRG	1 cut(s)	86
AoxI	GGCC	7 cut(s)	111, 884, 985, 1174, 1387, 1462, 1863
ApeKI	GCWGC	7 cut(s)	569, 782, 791, 971, 1326, 1503, 1506
ApoI	RAATTY	3 cut(s)	151, 672, 1788
AspLEI	GCGC	5 cut(s)	23, 38, 97, 106, 185
AspS9I	GGNCC	5 cut(s)	503, 516, 522, 1462, 1814
AsuC2I	CCSGG	1 cut(s)	351
AsuHPI	GGTGA	5 cut(s)	1142, 1280, 1367, 1418, 1523
AsuII	TTCGAA	1 cut(s)	1615
AvaI	CYCGRG	1 cut(s)	86
AvaII	GGWCC	4 cut(s)	503, 516, 522, 1814
BalI	TGGCCA	1 cut(s)	1389
BanI	GGYRCC	2 cut(s)	20, 182
BanII	GRGCYC	1 cut(s)	1195
BauI	CACGAG	1 cut(s)	795
BbsI	GAAGAC	2 cut(s)	1545, 1638
Bbv12I	GWGCWC	1 cut(s)	802
BbvI	GCAGC	7 cut(s)	581, 778, 794, 958, 1313, 1515, 1518
BccI	CCATC	7 cut(s)	443, 839, 884, 1274, 1331, 1630, 1801
BceAI	ACGGC	1 cut(s)	91
BciT130I	CCWGG	4 cut(s)	224, 501, 520, 1546
BciVI	GTATCC	1 cut(s)	1516
BclI	TGATCA	2 cut(s)	915, 1513
BcnI	CCSGG	1 cut(s)	351
BcoDI	GTCTC	6 cut(s)	1646, 1670, 1709, 1733, 1757, 1843
BfaI	CTAG	1 cut(s)	852
BfmI	CTRYAG	1 cut(s)	1101
BfoI	RGCGCY	2 cut(s)	24, 186
BfuAI	ACCTGC	2 cut(s)	274, 894
BfuI	GTATCC	1 cut(s)	1516
BmcAI	AGTACT	1 cut(s)	962
Bme1390I	CCNGG	5 cut(s)	224, 351, 501, 520, 1546
Bme18I	GGWCC	4 cut(s)	503, 516, 522, 1814
BmeRI	GACNNNNNGTC	2 cut(s)	501, 514
BmeT110I	CYCGRG	1 cut(s)	86
BmgBI	CACGTC	2 cut(s)	900, 1019
BmgT120I	GGNCC	5 cut(s)	503, 516, 522, 1462, 1814
BmiI	GGNNCC	5 cut(s)	22, 184, 249, 429, 524
BmrFI	CCNGG	5 cut(s)	224, 351, 501, 520, 1546
BmrI	ACTGGG	3 cut(s)	37, 973, 1528
BmsI	GCATC	7 cut(s)	62, 1156, 1643, 1656, 1680, 1695, 1719
BmuI	ACTGGG	3 cut(s)	37, 973, 1528
BpiI	GAAGAC	2 cut(s)	1545, 1638
BplI	GAGNNNNNCTC	4 cut(s)	1546, 1578, 1814, 1846
BpmI	CTGGAG	5 cut(s)	230, 263, 483, 891, 1719
Bpu10I	CCTNAGC	1 cut(s)	1604
Bpu14I	TTCGAA	1 cut(s)	1615
BpuEI	CTTGAG	1 cut(s)	619
BpuMI	CCSGG	1 cut(s)	351
BsaHI	GRCGYC	3 cut(s)	5, 21, 183
BsaJI	CCNNGG	2 cut(s)	630, 1390
BsaWI	WCCGGW	1 cut(s)	376
BsaXI	ACNNNNNCTCC	2 cut(s)	481, 511
Bsc4I	CCNNNNNNNGG	6 cut(s)	57, 113, 356, 383, 437, 1568
Bse118I	RCCGGY	2 cut(s)	179, 185
Bse1I	ACTGG	6 cut(s)	43, 342, 608, 968, 1226, 1523
BseBI	CCWGG	4 cut(s)	224, 501, 520, 1546
BseDI	CCNNGG	2 cut(s)	630, 1390
BseGI	GGATG	7 cut(s)	454, 640, 724, 850, 1372, 1658, 1805
BseLI	CCNNNNNNNGG	6 cut(s)	57, 113, 356, 383, 437, 1568
BseMII	CTCAG	9 cut(s)	390, 482, 717, 936, 1608, 1618, 1665, 1740, 1845
BseNI	ACTGG	6 cut(s)	43, 342, 608, 968, 1226, 1523
BseRI	GAGGAG	3 cut(s)	138, 215, 272
BseXI	GCAGC	7 cut(s)	581, 778, 794, 958, 1313, 1515, 1518
BsgI	GTGCAG	1 cut(s)	922
Bsh1236I	CGCG	3 cut(s)	36, 97, 104
BshFI	GGCC	7 cut(s)	113, 886, 987, 1176, 1389, 1464, 1865
BshNI	GGYRCC	2 cut(s)	20, 182
BsiHKAI	GWGCWC	1 cut(s)	802
BsiHKCI	CYCGRG	1 cut(s)	86
BsiSI	CCGG	7 cut(s)	114, 161, 180, 186, 350, 377, 404
BslFI	GGGAC	2 cut(s)	319, 1029
BslI	CCNNNNNNNGG	6 cut(s)	57, 113, 356, 383, 437, 1568
BsmAI	GTCTC	6 cut(s)	1646, 1670, 1709, 1733, 1757, 1843
BsmFI	GGGAC	2 cut(s)	319, 1029
BsmI	GAATGC	2 cut(s)	285, 447
BsnI	GGCC	7 cut(s)	113, 886, 987, 1176, 1389, 1464, 1865
BsoBI	CYCGRG	1 cut(s)	86
Bsp119I	TTCGAA	1 cut(s)	1615
Bsp1286I	GDGCHC	2 cut(s)	802, 1195
Bsp1407I	TGTACA	1 cut(s)	1205
Bsp143I	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
Bsp19I	CCATGG	1 cut(s)	1390
BspACI	CCGC	8 cut(s)	102, 164, 301, 304, 318, 527, 812, 1509
BspANI	GGCC	7 cut(s)	113, 886, 987, 1176, 1389, 1464, 1865
BspCNI	CTCAG	9 cut(s)	391, 481, 718, 937, 1607, 1617, 1666, 1741, 1844
BspFNI	CGCG	3 cut(s)	36, 97, 104
BspLI	GGNNCC	5 cut(s)	22, 184, 249, 429, 524
BspMAI	CTGCAG	1 cut(s)	1105
BspMI	ACCTGC	2 cut(s)	274, 894
BspPI	GGATC	6 cut(s)	73, 273, 621, 822, 1208, 1373
BspQI	GCTCTTC	1 cut(s)	1493
BspT104I	TTCGAA	1 cut(s)	1615
BspT107I	GGYRCC	2 cut(s)	20, 182
BsrBI	CCGCTC	2 cut(s)	301, 318
BsrFI	RCCGGY	2 cut(s)	179, 185
BsrGI	TGTACA	1 cut(s)	1205
BsrI	ACTGG	6 cut(s)	43, 342, 608, 968, 1226, 1523
BssAI	RCCGGY	2 cut(s)	179, 185
BssECI	CCNNGG	2 cut(s)	630, 1390
BssMI	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
BssNAI	GTATAC	1 cut(s)	840
BssNI	GRCGYC	3 cut(s)	5, 21, 183
BssSI	CACGAG	1 cut(s)	795
BssT1I	CCWWGG	2 cut(s)	630, 1390
Bst1107I	GTATAC	1 cut(s)	840
Bst2BI	CACGAG	1 cut(s)	795
Bst2UI	CCWGG	4 cut(s)	224, 501, 520, 1546
Bst4CI	ACNGT	2 cut(s)	1440, 1814
Bst6I	CTCTTC	4 cut(s)	306, 684, 1493, 1841
BstACI	GRCGYC	3 cut(s)	5, 21, 183
BstAPI	GCANNNNNTGC	1 cut(s)	791
BstAUI	TGTACA	1 cut(s)	1205
BstBI	TTCGAA	1 cut(s)	1615
BstC8I	GCNNGC	4 cut(s)	93, 181, 187, 567
BstDEI	CTNAG	9 cut(s)	399, 468, 726, 945, 1594, 1604, 1674, 1749, 1831
BstDSI	CCRYGG	1 cut(s)	1390
BstENI	CCTNNNNNAGG	2 cut(s)	55, 435
BstF5I	GGATG	7 cut(s)	454, 640, 724, 850, 1372, 1658, 1805
BstFNI	CGCG	3 cut(s)	36, 97, 104
BstH2I	RGCGCY	2 cut(s)	24, 186
BstHHI	GCGC	5 cut(s)	23, 38, 97, 106, 185
BstKTI	GATC	8 cut(s)	81, 268, 629, 817, 918, 1216, 1381, 1516
BstMAI	GTCTC	6 cut(s)	1646, 1670, 1709, 1733, 1757, 1843
BstMBI	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
BstMWI	GCNNNNNNNGC	9 cut(s)	101, 103, 110, 425, 788, 791, 797, 900, 1834
BstNI	CCWGG	4 cut(s)	224, 501, 520, 1546
BstNSI	RCATGY	2 cut(s)	782, 1804
BstSCI	CCNGG	5 cut(s)	222, 349, 499, 518, 1544
BstSFI	CTRYAG	1 cut(s)	1101
BstUI	CGCG	3 cut(s)	36, 97, 104
BstV1I	GCAGC	7 cut(s)	581, 778, 794, 958, 1313, 1515, 1518
BstV2I	GAAGAC	2 cut(s)	1545, 1638
BstXI	CCANNNNNNTGG	1 cut(s)	513
BstZ17I	GTATAC	1 cut(s)	840
BsuI	GTATCC	1 cut(s)	1516
BsuRI	GGCC	7 cut(s)	113, 886, 987, 1176, 1389, 1464, 1865
BtgI	CCRYGG	1 cut(s)	1390
BtgZI	GCGATG	1 cut(s)	1620
BtrI	CACGTC	2 cut(s)	900, 1019
BtsCI	GGATG	7 cut(s)	454, 640, 724, 850, 1372, 1658, 1805
BtsI	GCAGTG	1 cut(s)	1579
BtsIMutI	CAGTG	7 cut(s)	349, 615, 695, 934, 1305, 1516, 1579
BveI	ACCTGC	2 cut(s)	274, 894
Cac8I	GCNNGC	4 cut(s)	93, 181, 187, 567
CaiI	CAGNNNCTG	1 cut(s)	791
CfoI	GCGC	5 cut(s)	23, 38, 97, 106, 185
Cfr10I	RCCGGY	2 cut(s)	179, 185
Cfr13I	GGNCC	5 cut(s)	503, 516, 522, 1462, 1814
CseI	GACGC	1 cut(s)	1031
CsiI	ACCWGGT	1 cut(s)	1544
Csp6I	GTAC	4 cut(s)	27, 776, 961, 1206
CviQI	GTAC	4 cut(s)	27, 776, 961, 1206
DdeI	CTNAG	9 cut(s)	399, 468, 726, 945, 1594, 1604, 1674, 1749, 1831
DinI	GGCGCC	2 cut(s)	22, 184
DpnI	GATC	8 cut(s)	80, 267, 628, 816, 917, 1215, 1380, 1515
DpnII	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
DrdI	GACNNNNNNGTC	1 cut(s)	173
DriI	GACNNNNNGTC	2 cut(s)	501, 514
DseDI	GACNNNNNNGTC	1 cut(s)	173
EaeI	YGGCCR	2 cut(s)	111, 1387
Eam1104I	CTCTTC	4 cut(s)	306, 684, 1493, 1841
Eam1105I	GACNNNNNGTC	2 cut(s)	501, 514
EarI	CTCTTC	4 cut(s)	306, 684, 1493, 1841
EciI	GGCGGA	2 cut(s)	179, 827
Eco130I	CCWWGG	2 cut(s)	630, 1390
Eco147I	AGGCCT	1 cut(s)	886
Eco24I	GRGCYC	1 cut(s)	1195
Eco47I	GGWCC	4 cut(s)	503, 516, 522, 1814
Eco57I	CTGAAG	7 cut(s)	567, 638, 719, 1155, 1632, 1743, 1767
Eco88I	CYCGRG	1 cut(s)	86
EcoNI	CCTNNNNNAGG	2 cut(s)	55, 435
EcoRI	GAATTC	1 cut(s)	151
EcoRII	CCWGG	4 cut(s)	222, 499, 518, 1544
EcoT14I	CCWWGG	2 cut(s)	630, 1390
EcoT38I	GRGCYC	1 cut(s)	1195
EgeI	GGCGCC	2 cut(s)	22, 184
EheI	GGCGCC	2 cut(s)	22, 184
ErhI	CCWWGG	2 cut(s)	630, 1390
FaqI	GGGAC	2 cut(s)	319, 1029
FauI	CCCGC	1 cut(s)	534
FauNDI	CATATG	2 cut(s)	1089, 1276
FbaI	TGATCA	2 cut(s)	915, 1513
FblI	GTMKAC	1 cut(s)	839
FokI	GGATG	7 cut(s)	461, 647, 731, 857, 1379, 1645, 1792
FriOI	GRGCYC	1 cut(s)	1195
FspBI	CTAG	1 cut(s)	852
GlaI	GCGC	5 cut(s)	22, 37, 96, 105, 184
GsuI	CTGGAG	5 cut(s)	230, 263, 483, 891, 1719
HaeII	RGCGCY	2 cut(s)	24, 186
HaeIII	GGCC	7 cut(s)	113, 886, 987, 1176, 1389, 1464, 1865
HapII	CCGG	7 cut(s)	114, 161, 180, 186, 350, 377, 404
HgaI	GACGC	1 cut(s)	1031
HhaI	GCGC	5 cut(s)	23, 38, 97, 106, 185
Hin1I	GRCGYC	3 cut(s)	5, 21, 183
Hin6I	GCGC	5 cut(s)	21, 36, 95, 104, 183
HinP1I	GCGC	5 cut(s)	21, 36, 95, 104, 183
HpaII	CCGG	7 cut(s)	114, 161, 180, 186, 350, 377, 404
HphI	GGTGA	5 cut(s)	1142, 1280, 1367, 1418, 1523
Hpy166II	GTNNAC	5 cut(s)	732, 840, 909, 1046, 1206
Hpy8I	GTNNAC	5 cut(s)	732, 840, 909, 1046, 1206
Hpy99I	CGWCG	4 cut(s)	10, 149, 293, 1687
HpyCH4III	ACNGT	2 cut(s)	1440, 1814
HpyCH4IV	ACGT	2 cut(s)	899, 1018
HpyCH4V	TGCA	9 cut(s)	283, 445, 565, 691, 782, 903, 1087, 1103, 1634
HpyF10VI	GCNNNNNNNGC	9 cut(s)	101, 103, 110, 425, 788, 791, 797, 900, 1834
HpyF3I	CTNAG	9 cut(s)	399, 468, 726, 945, 1594, 1604, 1674, 1749, 1831
HpySE526I	ACGT	2 cut(s)	899, 1018
Hsp92I	GRCGYC	3 cut(s)	5, 21, 183
HspAI	GCGC	5 cut(s)	21, 36, 95, 104, 183
KasI	GGCGCC	2 cut(s)	20, 182
KroI	GCCGGC	2 cut(s)	179, 185
KroNI	GCCGGC	2 cut(s)	181, 187
Ksp22I	TGATCA	2 cut(s)	915, 1513
Kzo9I	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
LguI	GCTCTTC	1 cut(s)	1493
LmnI	GCTCC	8 cut(s)	163, 211, 298, 416, 433, 848, 994, 1156
Lsp1109I	GCAGC	7 cut(s)	581, 778, 794, 958, 1313, 1515, 1518
LweI	GCATC	7 cut(s)	62, 1156, 1643, 1656, 1680, 1695, 1719
MabI	ACCWGGT	1 cut(s)	1544
MaeI	CTAG	1 cut(s)	852
MaeII	ACGT	2 cut(s)	899, 1018
MaeIII	GTNAC	4 cut(s)	895, 940, 1019, 1355
MalI	GATC	8 cut(s)	80, 267, 628, 816, 917, 1215, 1380, 1515
MbiI	CCGCTC	2 cut(s)	301, 318
MboI	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
MboII	GAAGA	9 cut(s)	148, 323, 337, 488, 671, 1510, 1550, 1638, 1858
MfeI	CAATTG	2 cut(s)	420, 1209
MhlI	GDGCHC	2 cut(s)	802, 1195
MlsI	TGGCCA	1 cut(s)	1389
MluCI	AATT	8 cut(s)	151, 420, 555, 645, 672, 1072, 1209, 1788
MluNI	TGGCCA	1 cut(s)	1389
Mly113I	GGCGCC	2 cut(s)	21, 183
MlyI	GAGTC	4 cut(s)	341, 490, 737, 830
MmeI	TCCRAC	2 cut(s)	1665, 1833
Mox20I	TGGCCA	1 cut(s)	1389
MreI	CGCCGGCG	2 cut(s)	179, 185
MroNI	GCCGGC	2 cut(s)	179, 185
MscI	TGGCCA	1 cut(s)	1389
MslI	CAYNNNNRTG	2 cut(s)	1164, 1491
Msp20I	TGGCCA	1 cut(s)	1389
MspA1I	CMGCKG	1 cut(s)	1509
MspI	CCGG	7 cut(s)	114, 161, 180, 186, 350, 377, 404
MspR9I	CCNGG	5 cut(s)	224, 351, 501, 520, 1546
MunI	CAATTG	2 cut(s)	420, 1209
Mva1269I	GAATGC	2 cut(s)	285, 447
MvaI	CCWGG	4 cut(s)	224, 501, 520, 1546
MvnI	CGCG	3 cut(s)	36, 97, 104
MwoI	GCNNNNNNNGC	9 cut(s)	101, 103, 110, 425, 788, 791, 797, 900, 1834
NaeI	GCCGGC	2 cut(s)	181, 187
NarI	GGCGCC	2 cut(s)	21, 183
NciI	CCSGG	1 cut(s)	351
NcoI	CCATGG	1 cut(s)	1390
NdeI	CATATG	2 cut(s)	1089, 1276
NdeII	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
NgoMIV	GCCGGC	2 cut(s)	179, 185
NlaIV	GGNNCC	5 cut(s)	22, 184, 249, 429, 524
NmeAIII	GCCGAG	1 cut(s)	555
NmuCI	GTSAC	3 cut(s)	895, 1019, 1355
NspI	RCATGY	2 cut(s)	782, 1804
NspV	TTCGAA	1 cut(s)	1615
PaeR7I	CTCGAG	1 cut(s)	86
PaqCI	CACCTGC	1 cut(s)	894
PceI	AGGCCT	1 cut(s)	886
PciI	ACATGT	1 cut(s)	1800
PciSI	GCTCTTC	1 cut(s)	1493
PcsI	WCGNNNNNNNCGW	1 cut(s)	274
PctI	GAATGC	2 cut(s)	285, 447
PdiI	GCCGGC	2 cut(s)	181, 187
PfeI	GAWTC	6 cut(s)	205, 238, 271, 866, 1483, 1557
PflFI	GACNNNGTC	1 cut(s)	1681
PfoI	TCCNGGA	1 cut(s)	518
PleI	GAGTC	4 cut(s)	340, 490, 736, 829
PluTI	GGCGCC	2 cut(s)	24, 186
PpsI	GAGTC	4 cut(s)	340, 490, 736, 829
PscI	ACATGT	1 cut(s)	1800
Psp6I	CCWGG	4 cut(s)	222, 499, 518, 1544
PspGI	CCWGG	4 cut(s)	222, 499, 518, 1544
PspN4I	GGNNCC	5 cut(s)	22, 184, 249, 429, 524
PspPI	GGNCC	5 cut(s)	503, 516, 522, 1462, 1814
PsrI	GAACNNNNNNTAC	2 cut(s)	526, 558
PstI	CTGCAG	1 cut(s)	1105
PstNI	CAGNNNCTG	1 cut(s)	791
PsyI	GACNNNGTC	1 cut(s)	1681
RsaI	GTAC	4 cut(s)	28, 777, 962, 1207
RsaNI	GTAC	4 cut(s)	27, 776, 961, 1206
RseI	CAYNNNNRTG	2 cut(s)	1164, 1491
SapI	GCTCTTC	1 cut(s)	1493
Sau3AI	GATC	8 cut(s)	78, 265, 626, 814, 915, 1213, 1378, 1513
Sau96I	GGNCC	5 cut(s)	503, 516, 522, 1462, 1814
ScaI	AGTACT	1 cut(s)	962
SchI	GAGTC	4 cut(s)	341, 490, 737, 830
ScrFI	CCNGG	5 cut(s)	224, 351, 501, 520, 1546
SduI	GDGCHC	2 cut(s)	802, 1195
SexAI	ACCWGGT	1 cut(s)	1544
SfaNI	GCATC	7 cut(s)	62, 1156, 1643, 1656, 1680, 1695, 1719
SfcI	CTRYAG	1 cut(s)	1101
SfoI	GGCGCC	2 cut(s)	22, 184
Sfr274I	CTCGAG	1 cut(s)	86
SfuI	TTCGAA	1 cut(s)	1615
SgrAI	CRCCGGYG	2 cut(s)	179, 185
SinI	GGWCC	4 cut(s)	503, 516, 522, 1814
SlaI	CTCGAG	1 cut(s)	86
SmiMI	CAYNNNNRTG	2 cut(s)	1164, 1491
SmlI	CTYRAG	2 cut(s)	86, 598
SmoI	CTYRAG	2 cut(s)	86, 598
Sse9I	AATT	8 cut(s)	151, 420, 555, 645, 672, 1072, 1209, 1788
SseBI	AGGCCT	1 cut(s)	886
SsiI	CCGC	8 cut(s)	102, 164, 301, 304, 318, 527, 812, 1509
SspDI	GGCGCC	2 cut(s)	20, 182
SspMI	CTAG	1 cut(s)	852
StuI	AGGCCT	1 cut(s)	886
StyD4I	CCNGG	5 cut(s)	222, 349, 499, 518, 1544
StyI	CCWWGG	2 cut(s)	630, 1390
TaaI	ACNGT	2 cut(s)	1440, 1814
TaiI	ACGT	2 cut(s)	902, 1021
TaqI	TCGA	7 cut(s)	87, 147, 231, 291, 309, 708, 1615
TasI	AATT	8 cut(s)	151, 420, 555, 645, 672, 1072, 1209, 1788
TatI	WGTACW	4 cut(s)	26, 775, 960, 1205
TauI	GCSGC	3 cut(s)	304, 307, 321
TfiI	GAWTC	6 cut(s)	205, 238, 271, 866, 1483, 1557
TscAI	CASTG	7 cut(s)	349, 615, 702, 934, 1312, 1523, 1586
TseFI	GTSAC	3 cut(s)	895, 1019, 1355
TseI	GCWGC	7 cut(s)	569, 782, 791, 971, 1326, 1503, 1506
Tsp45I	GTSAC	3 cut(s)	895, 1019, 1355
TspGWI	ACGGA	2 cut(s)	857, 1044
TspRI	CASTG	7 cut(s)	349, 615, 702, 934, 1312, 1523, 1586
Tth111I	GACNNNGTC	1 cut(s)	1681
VpaK11BI	GGWCC	4 cut(s)	503, 516, 522, 1814
XagI	CCTNNNNNAGG	2 cut(s)	55, 435
XapI	RAATTY	3 cut(s)	151, 672, 1788
XceI	RCATGY	2 cut(s)	782, 1804
XcmI	CCANNNNNNNNNTGG	2 cut(s)	995, 1816
XhoI	CTCGAG	1 cut(s)	86
XmiI	GTMKAC	1 cut(s)	839
XspI	CTAG	1 cut(s)	852
ZrmI	AGTACT	1 cut(s)	962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.