Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0007443

Physical Location & Seq

Genomic Coordinates Reverse (-)

5266628 .. 5270679

Gene Structure 4052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG027600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGCGTCGTCTTATCTCGGCGCCTGTACTCCACGCGCCTCCCAGTTCTCCTTACACAGGCACAGACACCGGTGCCCGATCCTTCTCGAGCAGGCGCGAACCCCGCCGTTCGCCGGAAACAGAGGAGTAAGCTTGAAGGTCAGGGCGGCGTCTTCGGATGGCGGCGGAGACTCGTACCTCGGAATGTGGAAGAAGGCGATGGAGAACGAGAAGAAGGCCGTCAAGTTCCAGAAAATCGTCGAGAATTCAGCTCCGGCGGACAACGACGTCGCCGGCGCCGGCGAGGGCATTGCGGAGAATCTGGAGCATAAGAGCCAGGAGTTCGAGAAGATTCTGGAGGTTCCGAAGGAGGAGAGGGATCGGATTCAGCGAATGCAGGTCGTCGATAGGGCCGCGGCGGCGATCGCGGCGGCTCGCGCGCTTTTGAAAGAGAGCAGCTTGAAGAAGGAGTCCGGTTCCGGTGAGCCGGGTTCGGGTGGAGTGAGGACTGAACCGGATTTGGGTGGAGTGAGGACTGAGCCGGATTTGAGTGGAGCAATTGAGGCTCCTGATGAAGGAATGCAGGATGGGAGTATATCTGTGCCTCAGTCAGAAGAAAGTTCAGGAACTTGGACTCCAGGTCCAGACTTTTGGTCCTGGACCCCGCCGAGTAGTGATAGTTCAGATGATATAATTGACTTGCAGGCAGCGAAAAAGCCTTCAGCAAATCCAAACTTGAGTTTGCCAGTGAAGGAGAAAGAGCGATCCTTGGATGTTCTCTCAATTCCCCTTCAGAGTATTCTGTCTGAAATTCCTCTTCCCCCTTTGCAATCACTGAAGGAGGTCAAGAAAGTGGATGTCGCTGAGTCCACTTCCACAAAAGAGGAACATGAACTTGGACATGAGTTTTCAGTACATGCAGCAGAAGCTGCTCGTGCTCTTGATAAGGCGGATCAGGAGTCATTATCTGGTGTGTATACGGATGGAGCTAGGTGGTGGAAGGAATCTGGAGTTGAGCAAAGGCCGGATGGCGTGACGTGCAGGTGGACAATGATCAGAGGTGTCAGTGCCGACCAAGTTACTGAGTGGCAAGATAAGTACTGGGAGGCTGCAGATGAGTTAGGCCACAAGGAGCTTGGTTCAGAAAAATCGGGACGTGACGCATACGGAAATGTTTGGCGTGAACATTGGAAAGAAGCTATGTGGCAGAATTGTGGGCTTGTGCATATGGAGAAATCTGCAGACAAGTGGGGAAAGAATGGTAGAGGTGATGAATGGCAAGAGAAATGGTGGGAGCATTATGATGCTTCAGGCCAAGCAGAGAAATGGGCTCATAAGTGGTGTACAATTGATCCAAACACACCAGTTGATGTTGGTCATGCTCACATTTGGCATGAAAGGTACCAAATATTAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

465

Amino Acids

51.53

Weight (kDa)

5.29

Isoelectric Point (pI)

38.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55760 AT3G55760 AT3G55760
fragaria_vesca	FvH4_4g01790 FvH4_4g01790
malus_domestica	MD13G1202100.v1.1 MD16G1202300.v1.1
prunus_persica	Prupe.1G023800_v2.0.a1
pyrus_communis	pycom16g17070
rosa_chinensis	RchiOBHm_Chr4g0388701 RchiOBHm_Chr4g0388821
rosa_laevigata	RLG00000010026
rosa_multiflora	Rmu_sc0000697.1_g000013 Rmu_sc0010392.1_g000002 Rmu_sc0016023.1_g000002
rosa_roxburghii	Rroxscaffold_5G00335100
rosa_rugosa	Rorug03G0320100
rosa_samantha	Rh4AG024100 Rh4AG024900 Rh4BG017900 Rh4CG026900 Rh4CG027600 Rh4DG018200
rosa_wichuraiana	Rw4G001740 Rw4G001780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1011
AasI	GACNNNNNNGTC	1 cut(s)	266
AatII	GACGTC	1 cut(s)	270
Acc36I	ACCTGC	2 cut(s)	367, 1011
Acc65I	GGTACC	1 cut(s)	1380
AccB1I	GGYRCC	4 cut(s)	20, 72, 275, 1380
AccI	GTMKAC	1 cut(s)	956
AccII	CGCG	6 cut(s)	36, 97, 395, 407, 417, 419
AclWI	GGATC	5 cut(s)	73, 366, 738, 939, 1325
AcsI	RAATTY	2 cut(s)	244, 789
AcuI	CTGAAG	4 cut(s)	684, 755, 836, 1272
AcyI	GRCGYC	5 cut(s)	5, 21, 149, 267, 276
AfaI	GTAC	6 cut(s)	28, 176, 894, 1079, 1324, 1382
AfiI	CCNNNNNNNGG	5 cut(s)	57, 113, 473, 500, 554
AgeI	ACCGGT	1 cut(s)	69
AgsI	TTSAA	3 cut(s)	136, 427, 442
AhdI	GACNNNNNGTC	2 cut(s)	618, 631
AjiI	CACGTC	2 cut(s)	1017, 1136
AjnI	CCWGG	3 cut(s)	315, 616, 635
AjuI	GAANNNNNNNTTGG	2 cut(s)	858, 890
AloI	GAACNNNNNNTCC	2 cut(s)	598, 630
AluBI	AGCT	7 cut(s)	132, 251, 438, 908, 968, 1114, 1178
AluI	AGCT	7 cut(s)	132, 251, 438, 908, 968, 1114, 1178
Alw21I	GWGCWC	1 cut(s)	919
Alw26I	GTCTC	1 cut(s)	162
AlwI	GGATC	5 cut(s)	73, 366, 738, 939, 1325
AlwNI	CAGNNNCTG	1 cut(s)	908
Ama87I	CYCGRG	1 cut(s)	86
AoxI	GGCC	5 cut(s)	216, 390, 1001, 1102, 1291
ApeKI	GCWGC	5 cut(s)	435, 686, 899, 908, 1088
ApoI	RAATTY	2 cut(s)	244, 789
AsiGI	ACCGGT	1 cut(s)	69
AsiSI	GCGATCGC	1 cut(s)	405
Asp718I	GGTACC	1 cut(s)	1380
AspLEI	GCGC	6 cut(s)	23, 38, 97, 278, 419, 421
AspS9I	GGNCC	4 cut(s)	390, 620, 633, 639
AsuC2I	CCSGG	1 cut(s)	468
AsuHPI	GGTGA	2 cut(s)	473, 1259
AvaI	CYCGRG	1 cut(s)	86
AvaII	GGWCC	3 cut(s)	620, 633, 639
BaeGI	GKGCMC	1 cut(s)	77
BanI	GGYRCC	4 cut(s)	20, 72, 275, 1380
BanII	GRGCYC	1 cut(s)	1312
BauI	CACGAG	1 cut(s)	912
BbsI	GAAGAC	1 cut(s)	144
Bbv12I	GWGCWC	1 cut(s)	919
BbvI	GCAGC	5 cut(s)	447, 698, 895, 911, 1075
BccI	CCATC	5 cut(s)	152, 193, 560, 956, 1001
BceAI	ACGGC	2 cut(s)	91, 203
BcgI	CGANNNNNNTGC	2 cut(s)	272, 306
BciT130I	CCWGG	3 cut(s)	317, 618, 637
BclI	TGATCA	1 cut(s)	1032
BcnI	CCSGG	1 cut(s)	468
BcoDI	GTCTC	1 cut(s)	162
BfaI	CTAG	1 cut(s)	969
BfmI	CTRYAG	2 cut(s)	1089, 1218
BfoI	RGCGCY	2 cut(s)	24, 279
BfuAI	ACCTGC	2 cut(s)	367, 1011
BglI	GCCNNNNNGGC	1 cut(s)	398
BmcAI	AGTACT	1 cut(s)	1079
Bme1390I	CCNGG	4 cut(s)	317, 468, 618, 637
Bme18I	GGWCC	3 cut(s)	620, 633, 639
BmeRI	GACNNNNNGTC	2 cut(s)	618, 631
BmeT110I	CYCGRG	1 cut(s)	86
BmgBI	CACGTC	2 cut(s)	1017, 1136
BmgT120I	GGNCC	4 cut(s)	390, 620, 633, 639
BmiI	GGNNCC	8 cut(s)	22, 74, 277, 342, 457, 546, 641, 1382
BmrFI	CCNGG	4 cut(s)	317, 468, 618, 637
BmrI	ACTGGG	2 cut(s)	37, 1090
BmsI	GCATC	1 cut(s)	1273
BmuI	ACTGGG	2 cut(s)	37, 1090
BpiI	GAAGAC	1 cut(s)	144
BpmI	CTGGAG	4 cut(s)	323, 356, 600, 1008
BpuEI	CTTGAG	1 cut(s)	736
BpuMI	CCSGG	1 cut(s)	468
BsaHI	GRCGYC	5 cut(s)	5, 21, 149, 267, 276
BsaJI	CCNNGG	3 cut(s)	178, 393, 747
BsaWI	WCCGGW	4 cut(s)	69, 452, 458, 493
BsaXI	ACNNNNNCTCC	2 cut(s)	598, 628
Bsc4I	CCNNNNNNNGG	5 cut(s)	57, 113, 473, 500, 554
Bse118I	RCCGGY	3 cut(s)	69, 272, 278
Bse1I	ACTGG	4 cut(s)	43, 725, 1085, 1343
Bse3DI	GCAATG	1 cut(s)	288
BseBI	CCWGG	3 cut(s)	317, 618, 637
BseDI	CCNNGG	3 cut(s)	178, 393, 747
BseGI	GGATG	6 cut(s)	163, 571, 757, 841, 967, 1012
BseLI	CCNNNNNNNGG	5 cut(s)	57, 113, 473, 500, 554
BseMI	GCAATG	1 cut(s)	288
BseMII	CTCAG	4 cut(s)	507, 599, 834, 1053
BseNI	ACTGG	4 cut(s)	43, 725, 1085, 1343
BsePI	GCGCGC	1 cut(s)	417
BseRI	GAGGAG	2 cut(s)	138, 365
BseSI	GKGCMC	1 cut(s)	77
BseXI	GCAGC	5 cut(s)	447, 698, 895, 911, 1075
BsgI	GTGCAG	1 cut(s)	1039
Bsh1236I	CGCG	6 cut(s)	36, 97, 395, 407, 417, 419
Bsh1285I	CGRYCG	1 cut(s)	405
BshFI	GGCC	5 cut(s)	218, 392, 1003, 1104, 1293
BshNI	GGYRCC	4 cut(s)	20, 72, 275, 1380
BshTI	ACCGGT	1 cut(s)	69
BsiEI	CGRYCG	1 cut(s)	405
BsiHKAI	GWGCWC	1 cut(s)	919
BsiHKCI	CYCGRG	1 cut(s)	86
BslFI	GGGAC	1 cut(s)	1146
BslI	CCNNNNNNNGG	5 cut(s)	57, 113, 473, 500, 554
BsmAI	GTCTC	1 cut(s)	162
BsmFI	GGGAC	1 cut(s)	1146
BsmI	GAATGC	2 cut(s)	378, 564
BsnI	GGCC	5 cut(s)	218, 392, 1003, 1104, 1293
BsoBI	CYCGRG	1 cut(s)	86
Bsp1286I	GDGCHC	3 cut(s)	77, 919, 1312
Bsp1407I	TGTACA	1 cut(s)	1322
Bsp143I	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
BspANI	GGCC	5 cut(s)	218, 392, 1003, 1104, 1293
BspCNI	CTCAG	4 cut(s)	508, 598, 835, 1054
BspFNI	CGCG	6 cut(s)	36, 97, 395, 407, 417, 419
BspLI	GGNNCC	8 cut(s)	22, 74, 277, 342, 457, 546, 641, 1382
BspMAI	CTGCAG	2 cut(s)	1093, 1222
BspMI	ACCTGC	2 cut(s)	367, 1011
BspPI	GGATC	5 cut(s)	73, 366, 738, 939, 1325
BspT107I	GGYRCC	4 cut(s)	20, 72, 275, 1380
BsrDI	GCAATG	1 cut(s)	288
BsrFI	RCCGGY	3 cut(s)	69, 272, 278
BsrGI	TGTACA	1 cut(s)	1322
BsrI	ACTGG	4 cut(s)	43, 725, 1085, 1343
BssAI	RCCGGY	3 cut(s)	69, 272, 278
BssECI	CCNNGG	3 cut(s)	178, 393, 747
BssHII	GCGCGC	1 cut(s)	417
BssMI	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
BssNAI	GTATAC	1 cut(s)	957
BssNI	GRCGYC	5 cut(s)	5, 21, 149, 267, 276
BssSI	CACGAG	1 cut(s)	912
BssT1I	CCWWGG	1 cut(s)	747
Bst1107I	GTATAC	1 cut(s)	957
Bst2BI	CACGAG	1 cut(s)	912
Bst2UI	CCWGG	3 cut(s)	317, 618, 637
Bst6I	CTCTTC	1 cut(s)	801
BstACI	GRCGYC	5 cut(s)	5, 21, 149, 267, 276
BstAPI	GCANNNNNTGC	1 cut(s)	908
BstAUI	TGTACA	1 cut(s)	1322
BstC8I	GCNNGC	6 cut(s)	93, 274, 280, 415, 419, 684
BstDEI	CTNAG	4 cut(s)	516, 585, 843, 1062
BstDSI	CCRYGG	1 cut(s)	393
BstENI	CCTNNNNNAGG	2 cut(s)	55, 552
BstF5I	GGATG	6 cut(s)	163, 571, 757, 841, 967, 1012
BstFNI	CGCG	6 cut(s)	36, 97, 395, 407, 417, 419
BstH2I	RGCGCY	2 cut(s)	24, 279
BstHHI	GCGC	6 cut(s)	23, 38, 97, 278, 419, 421
BstKTI	GATC	7 cut(s)	81, 361, 405, 746, 934, 1035, 1333
BstMAI	GTCTC	1 cut(s)	162
BstMBI	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
BstMCI	CGRYCG	1 cut(s)	405
BstNI	CCWGG	3 cut(s)	317, 618, 637
BstNSI	RCATGY	1 cut(s)	899
BstSCI	CCNGG	4 cut(s)	315, 466, 616, 635
BstSFI	CTRYAG	2 cut(s)	1089, 1218
BstSLI	GKGCMC	1 cut(s)	77
BstUI	CGCG	6 cut(s)	36, 97, 395, 407, 417, 419
BstV1I	GCAGC	5 cut(s)	447, 698, 895, 911, 1075
BstV2I	GAAGAC	1 cut(s)	144
BstXI	CCANNNNNNTGG	1 cut(s)	630
BstZ17I	GTATAC	1 cut(s)	957
BsuRI	GGCC	5 cut(s)	218, 392, 1003, 1104, 1293
BtgI	CCRYGG	1 cut(s)	393
BtgZI	GCGATG	1 cut(s)	212
BtrI	CACGTC	2 cut(s)	1017, 1136
BtsCI	GGATG	6 cut(s)	163, 571, 757, 841, 967, 1012
BtsIMutI	CAGTG	3 cut(s)	732, 812, 1051
BveI	ACCTGC	2 cut(s)	367, 1011
Cac8I	GCNNGC	6 cut(s)	93, 274, 280, 415, 419, 684
CaiI	CAGNNNCTG	1 cut(s)	908
CfoI	GCGC	6 cut(s)	23, 38, 97, 278, 419, 421
Cfr10I	RCCGGY	3 cut(s)	69, 272, 278
Cfr13I	GGNCC	4 cut(s)	390, 620, 633, 639
Cfr42I	CCGCGG	1 cut(s)	396
CseI	GACGC	2 cut(s)	138, 1148
Csp6I	GTAC	6 cut(s)	27, 175, 893, 1078, 1323, 1381
CspAI	ACCGGT	1 cut(s)	69
CviAII	CATG	5 cut(s)	869, 881, 896, 1358, 1373
CviQI	GTAC	6 cut(s)	27, 175, 893, 1078, 1323, 1381
DdeI	CTNAG	4 cut(s)	516, 585, 843, 1062
DinI	GGCGCC	2 cut(s)	22, 277
DpnI	GATC	7 cut(s)	80, 360, 404, 745, 933, 1034, 1332
DpnII	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
DrdI	GACNNNNNNGTC	1 cut(s)	266
DriI	GACNNNNNGTC	2 cut(s)	618, 631
DseDI	GACNNNNNNGTC	1 cut(s)	266
Eam1104I	CTCTTC	1 cut(s)	801
Eam1105I	GACNNNNNGTC	2 cut(s)	618, 631
EarI	CTCTTC	1 cut(s)	801
EciI	GGCGGA	3 cut(s)	180, 272, 944
Eco130I	CCWWGG	1 cut(s)	747
Eco24I	GRGCYC	1 cut(s)	1312
Eco47I	GGWCC	3 cut(s)	620, 633, 639
Eco57I	CTGAAG	4 cut(s)	684, 755, 836, 1272
Eco88I	CYCGRG	1 cut(s)	86
EcoNI	CCTNNNNNAGG	2 cut(s)	55, 552
EcoRI	GAATTC	1 cut(s)	244
EcoRII	CCWGG	3 cut(s)	315, 616, 635
EcoT14I	CCWWGG	1 cut(s)	747
EcoT38I	GRGCYC	1 cut(s)	1312
EgeI	GGCGCC	2 cut(s)	22, 277
EheI	GGCGCC	2 cut(s)	22, 277
ErhI	CCWWGG	1 cut(s)	747
FaeI	CATG	5 cut(s)	872, 884, 899, 1361, 1376
FaqI	GGGAC	1 cut(s)	1146
FatI	CATG	5 cut(s)	868, 880, 895, 1357, 1372
FauI	CCCGC	2 cut(s)	111, 651
FauNDI	CATATG	1 cut(s)	1206
FbaI	TGATCA	1 cut(s)	1032
FblI	GTMKAC	1 cut(s)	956
FokI	GGATG	6 cut(s)	170, 578, 764, 848, 974, 1019
FriOI	GRGCYC	1 cut(s)	1312
FspBI	CTAG	1 cut(s)	969
GlaI	GCGC	6 cut(s)	22, 37, 96, 277, 418, 420
GsuI	CTGGAG	4 cut(s)	323, 356, 600, 1008
HaeII	RGCGCY	2 cut(s)	24, 279
HaeIII	GGCC	5 cut(s)	218, 392, 1003, 1104, 1293
HgaI	GACGC	2 cut(s)	138, 1148
HhaI	GCGC	6 cut(s)	23, 38, 97, 278, 419, 421
Hin1I	GRCGYC	5 cut(s)	5, 21, 149, 267, 276
Hin1II	CATG	5 cut(s)	872, 884, 899, 1361, 1376
Hin6I	GCGC	6 cut(s)	21, 36, 95, 276, 417, 419
HinP1I	GCGC	6 cut(s)	21, 36, 95, 276, 417, 419
HindIII	AAGCTT	1 cut(s)	130
HinfI	GANTC	9 cut(s)	170, 298, 331, 364, 449, 613, 845, 938, 983
HphI	GGTGA	2 cut(s)	473, 1259
Hpy166II	GTNNAC	5 cut(s)	849, 957, 1026, 1163, 1323
Hpy8I	GTNNAC	5 cut(s)	849, 957, 1026, 1163, 1323
Hpy99I	CGWCG	5 cut(s)	10, 242, 269, 272, 386
HpyCH4IV	ACGT	3 cut(s)	267, 1016, 1135
HpyCH4V	TGCA	9 cut(s)	376, 562, 682, 808, 899, 1020, 1091, 1204, 1220
HpyF3I	CTNAG	4 cut(s)	516, 585, 843, 1062
HpySE526I	ACGT	3 cut(s)	267, 1016, 1135
Hsp92I	GRCGYC	5 cut(s)	5, 21, 149, 267, 276
Hsp92II	CATG	5 cut(s)	872, 884, 899, 1361, 1376
HspAI	GCGC	6 cut(s)	21, 36, 95, 276, 417, 419
KasI	GGCGCC	2 cut(s)	20, 275
KpnI	GGTACC	1 cut(s)	1384
KroI	GCCGGC	2 cut(s)	272, 278
KroNI	GCCGGC	2 cut(s)	274, 280
Ksp22I	TGATCA	1 cut(s)	1032
KspI	CCGCGG	1 cut(s)	396
Kzo9I	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
LmnI	GCTCC	7 cut(s)	256, 304, 533, 550, 965, 1111, 1273
Lsp1109I	GCAGC	5 cut(s)	447, 698, 895, 911, 1075
LweI	GCATC	1 cut(s)	1273
MaeI	CTAG	1 cut(s)	969
MaeII	ACGT	3 cut(s)	267, 1016, 1135
MaeIII	GTNAC	3 cut(s)	1012, 1057, 1136
MalI	GATC	7 cut(s)	80, 360, 404, 745, 933, 1034, 1332
MboI	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
MboII	GAAGA	7 cut(s)	144, 202, 223, 340, 454, 605, 788
MfeI	CAATTG	2 cut(s)	537, 1326
MhlI	GDGCHC	3 cut(s)	77, 919, 1312
MluCI	AATT	7 cut(s)	244, 537, 672, 762, 789, 1189, 1326
Mly113I	GGCGCC	2 cut(s)	21, 276
MlyI	GAGTC	5 cut(s)	164, 458, 607, 854, 947
MreI	CGCCGGCG	2 cut(s)	272, 278
MroNI	GCCGGC	2 cut(s)	272, 278
MseI	TTAA	2 cut(s)	1391, 1396
MslI	CAYNNNNRTG	1 cut(s)	1281
MspA1I	CMGCKG	1 cut(s)	395
MspR9I	CCNGG	4 cut(s)	317, 468, 618, 637
MunI	CAATTG	2 cut(s)	537, 1326
Mva1269I	GAATGC	2 cut(s)	378, 564
MvaI	CCWGG	3 cut(s)	317, 618, 637
MvnI	CGCG	6 cut(s)	36, 97, 395, 407, 417, 419
NaeI	GCCGGC	2 cut(s)	274, 280
NarI	GGCGCC	2 cut(s)	21, 276
NciI	CCSGG	1 cut(s)	468
NdeI	CATATG	1 cut(s)	1206
NdeII	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
NgoMIV	GCCGGC	2 cut(s)	272, 278
NlaIII	CATG	5 cut(s)	872, 884, 899, 1361, 1376
NlaIV	GGNNCC	8 cut(s)	22, 74, 277, 342, 457, 546, 641, 1382
NmeAIII	GCCGAG	1 cut(s)	672
NmuCI	GTSAC	2 cut(s)	1012, 1136
NspI	RCATGY	1 cut(s)	899
PaeR7I	CTCGAG	1 cut(s)	86
PaqCI	CACCTGC	1 cut(s)	1011
PauI	GCGCGC	1 cut(s)	417
PcsI	WCGNNNNNNNCGW	1 cut(s)	367
PctI	GAATGC	2 cut(s)	378, 564
PdiI	GCCGGC	2 cut(s)	274, 280
PfeI	GAWTC	4 cut(s)	298, 331, 364, 983
PfoI	TCCNGGA	1 cut(s)	635
PinAI	ACCGGT	1 cut(s)	69
Ple19I	CGATCG	1 cut(s)	405
PleI	GAGTC	5 cut(s)	164, 457, 607, 853, 946
PluTI	GGCGCC	2 cut(s)	24, 279
PpsI	GAGTC	5 cut(s)	164, 457, 607, 853, 946
Psp6I	CCWGG	3 cut(s)	315, 616, 635
PspGI	CCWGG	3 cut(s)	315, 616, 635
PspN4I	GGNNCC	8 cut(s)	22, 74, 277, 342, 457, 546, 641, 1382
PspPI	GGNCC	4 cut(s)	390, 620, 633, 639
PsrI	GAACNNNNNNTAC	2 cut(s)	643, 675
PstI	CTGCAG	2 cut(s)	1093, 1222
PstNI	CAGNNNCTG	1 cut(s)	908
PteI	GCGCGC	1 cut(s)	417
PvuI	CGATCG	1 cut(s)	405
RgaI	GCGATCGC	1 cut(s)	405
RsaI	GTAC	6 cut(s)	28, 176, 894, 1079, 1324, 1382
RsaNI	GTAC	6 cut(s)	27, 175, 893, 1078, 1323, 1381
RseI	CAYNNNNRTG	1 cut(s)	1281
SacII	CCGCGG	1 cut(s)	396
SaqAI	TTAA	2 cut(s)	1391, 1396
Sau3AI	GATC	7 cut(s)	78, 358, 402, 743, 931, 1032, 1330
Sau96I	GGNCC	4 cut(s)	390, 620, 633, 639
ScaI	AGTACT	1 cut(s)	1079
SchI	GAGTC	5 cut(s)	164, 458, 607, 854, 947
ScrFI	CCNGG	4 cut(s)	317, 468, 618, 637
SduI	GDGCHC	3 cut(s)	77, 919, 1312
SfaAI	GCGATCGC	1 cut(s)	405
SfaNI	GCATC	1 cut(s)	1273
SfcI	CTRYAG	2 cut(s)	1089, 1218
SfoI	GGCGCC	2 cut(s)	22, 277
Sfr274I	CTCGAG	1 cut(s)	86
Sfr303I	CCGCGG	1 cut(s)	396
SgfI	GCGATCGC	1 cut(s)	405
SgrAI	CRCCGGYG	3 cut(s)	69, 272, 278
SgrBI	CCGCGG	1 cut(s)	396
SinI	GGWCC	3 cut(s)	620, 633, 639
SlaI	CTCGAG	1 cut(s)	86
SmiMI	CAYNNNNRTG	1 cut(s)	1281
SmlI	CTYRAG	2 cut(s)	86, 715
SmoI	CTYRAG	2 cut(s)	86, 715
Sse9I	AATT	7 cut(s)	244, 537, 672, 762, 789, 1189, 1326
SspDI	GGCGCC	2 cut(s)	20, 275
SspI	AATATT	1 cut(s)	1389
SspMI	CTAG	1 cut(s)	969
StyD4I	CCNGG	4 cut(s)	315, 466, 616, 635
StyI	CCWWGG	1 cut(s)	747
TaiI	ACGT	3 cut(s)	270, 1019, 1138
TaqI	TCGA	4 cut(s)	87, 240, 324, 384
TasI	AATT	7 cut(s)	244, 537, 672, 762, 789, 1189, 1326
TatI	WGTACW	4 cut(s)	26, 892, 1077, 1322
TauI	GCSGC	7 cut(s)	149, 165, 395, 398, 401, 410, 413
TfiI	GAWTC	4 cut(s)	298, 331, 364, 983
Tru1I	TTAA	2 cut(s)	1391, 1396
Tru9I	TTAA	2 cut(s)	1391, 1396
TscAI	CASTG	3 cut(s)	732, 819, 1051
TseFI	GTSAC	2 cut(s)	1012, 1136
TseI	GCWGC	5 cut(s)	435, 686, 899, 908, 1088
Tsp45I	GTSAC	2 cut(s)	1012, 1136
TspDTI	ATGAA	4 cut(s)	567, 885, 1266, 1389
TspGWI	ACGGA	2 cut(s)	974, 1161
TspRI	CASTG	3 cut(s)	732, 819, 1051
VpaK11BI	GGWCC	3 cut(s)	620, 633, 639
XagI	CCTNNNNNAGG	2 cut(s)	55, 552
XapI	RAATTY	2 cut(s)	244, 789
XceI	RCATGY	1 cut(s)	899
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1112
XhoI	CTCGAG	1 cut(s)	86
XmiI	GTMKAC	1 cut(s)	956
XspI	CTAG	1 cut(s)	969
ZraI	GACGTC	1 cut(s)	268
ZrmI	AGTACT	1 cut(s)	1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.