Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0007443

Physical Location & Seq

Genomic Coordinates Reverse (-)

2575150 .. 2578806

Gene Structure 3657 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00335100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGCGTCGTCTTATCTCGGCGCCTGTACTCCACGCGCCTCCCAGTTCTCCTTACACAGGCACAGACACCGATGCCCGATCCCTCTCCAGCAGGCGCGAACCGCGCTGTTGGCCGGAAACAGAGGAGTTAGCTTGAAGGTCAGGGCGGCGTCTTCGGATGGCGGCGGGGACTCGTACCTCGGAATGTGGAAGAAGGCGATGGAGAACGAGAAGAAAGCCGTCAAGTTCCAGAAAATCGTCGAGAATTCAGCTCCGGCGGACAACGACGTCGGCGGCTCCGGCGAGAGCATTGCGGAGAATCTGGAGCATAAGAGCCAGGAGTTCGAGAAGATTCTGGAGGTTCCGAAGGAGGAGAGGGATCGGATTCAGCGAATGCAGGTCGTCGATAGGGCCGCGGCGGCGATCGCGGCGGCTCGCGCGCTTTTGAAAGAGAGCGGCTTGAAGGAGTCAGGTTCAGGTGAGCCGGGTTCGGGTGGAGTGAGGACTGAACCGGATTTGAGTGGAGCAATTGAGGCTCCTGATGAAGGAATGCAGGATGGGAGTATATCTGTGCCTCAGTCAGAAGAAAGTTCAGGAACTTGGACTCCAGGTCCAGACTTTTGGTCCTGGACCCCGCCTAGTGGTGATAGTTCAGATGATATAATTGACTTGCAGGCAGTGAAAAAGCCTTCAGCAAATCCAAACTTGACTTTTCCAGTGAAGGAGAAAGAGCGATCCTTGGATGTTCTCTCAATTCCCCTTCAGAGTATTCTGTCTCAAATTCCTCTTCCCCCTTTGCAATCACTGAAGGAGGTCAAGAAAGTGGATGTCGCTGAGTCCACTTCCACAAAAGAGGAACATGAACTTGGACATGAGTTTTCAGTACATGCAGCAGAAGCTGCTCGTGCTCTTGATAAGGTGGTTCAGGAGTCATTATCTGGTGTGTATACGGATGGAGCTAGGTGGTGGAAGGAATCTGGAGTTGAGCAAAGGCCGGATGGCGTGACGTGCAGGTGGACAATGATCAGAGGTGTCAGTGCCGACCAAGTTACTGAGTGGCAAGATAAGTACTGGGAGGCTGCAGATGAGTTAGGCCACAAGGAGCTTGGTTCAGAAAAATCGGGACGTGACGCATACGGAAATGTTTGGCGTGAACATTGGAAAGAAGCTATGTGGCAGAATTGTGGGCTTGTGCATATGGAGAAATCTGCAGACAAGTGGGGAAAGAATGGTAGAGGTGATGAATGGCAAGAGAAATGGTGGGAGCATTATGATGCTTCAGGCCAAGCAGAGAAATGGGCTCATAAGTGGTGTACAATTGATCCAAACACACCAGTTGATGTCGGTCATGCTCACATTTGGCATGAAAGGTGGGGTGAAAAGTATGATGGACATGGTGGGAGTAATAAATACACTGACAAATGGGCTGAACGCTGCGAGGGAGATGGTTGGTCAAAATGGGGTGACAAATGGGATGAACATTTTGATCCAAATGGCCATGGTGTGAAGCAGGGTGAAACATGGTGGGAAGGCAAGTATGGAGAGCGGTGGAACAAAACATGGGGTGAGGGCCACAATGGTTCAGGGTGGATTCACAAGTATGGGAAGAGCAGCAGCGGTGATCACTGGGATACACATCAGCAGGAAGACACCTGGTATGAGAGATTCCCTCACTTCGGTTTCTATCACTGCTTTGAAAACTCAGTTCAGCTCAGGGAAGTTCGAAAGCCATCAGAGATTGCATCGCAGATGTCTTCAGAGACTTCATCCGAGATGCCTTCTGAGACTTCGTCGGAGATGCCTTCATCAGAGATGCTTTCAGAGACTTCATCAGAGATGCCTCCAGAGACTTCATCTGAGATACCTCCAGAGACTTCATCTGAGATACCTCCAGAGACTTCATCGGAGATACCTTCAGAAATTCCATCGGACATGTCATCAGACGGTGCATTGGAGTTGCCCTCAGAGCTTCTATTGAAGAGACAATCAGAGGTGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

659

Amino Acids

73.63

Weight (kDa)

5.05

Isoelectric Point (pI)

48.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55760 AT3G55760 AT3G55760
fragaria_vesca	FvH4_4g01790 FvH4_4g01790
malus_domestica	MD13G1202100.v1.1 MD16G1202300.v1.1
prunus_persica	Prupe.1G023800_v2.0.a1
pyrus_communis	pycom16g17070
rosa_chinensis	RchiOBHm_Chr4g0388701 RchiOBHm_Chr4g0388821
rosa_laevigata	RLG00000010026
rosa_multiflora	Rmu_sc0000697.1_g000013 Rmu_sc0010392.1_g000002 Rmu_sc0016023.1_g000002
rosa_roxburghii	Rroxscaffold_5G00335100
rosa_rugosa	Rorug03G0320100
rosa_samantha	Rh4AG024100 Rh4AG024900 Rh4BG017900 Rh4CG026900 Rh4CG027600 Rh4DG018200
rosa_wichuraiana	Rw4G001740 Rw4G001780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	981
AasI	GACNNNNNNGTC	1 cut(s)	266
AatII	GACGTC	1 cut(s)	270
Acc36I	ACCTGC	2 cut(s)	367, 981
AccB1I	GGYRCC	1 cut(s)	20
AccBSI	CCGCTC	2 cut(s)	435, 1525
AccI	GTMKAC	1 cut(s)	926
AccII	CGCG	7 cut(s)	36, 97, 104, 395, 407, 417, 419
AclWI	GGATC	5 cut(s)	73, 366, 708, 1295, 1460
AcoI	YGGCCR	2 cut(s)	111, 1474
AcsI	RAATTY	3 cut(s)	244, 759, 1899
AcuI	CTGAAG	6 cut(s)	654, 725, 806, 1242, 1719, 1878
AcyI	GRCGYC	4 cut(s)	5, 21, 149, 267
AfaI	GTAC	5 cut(s)	28, 176, 864, 1049, 1294
AfiI	CCNNNNNNNGG	5 cut(s)	57, 470, 524, 620, 1655
AflIII	ACRYGT	1 cut(s)	1911
AgsI	TTSAA	5 cut(s)	136, 427, 442, 1676, 1957
AhdI	GACNNNNNGTC	2 cut(s)	588, 601
AjiI	CACGTC	2 cut(s)	987, 1106
AjnI	CCWGG	4 cut(s)	315, 586, 605, 1631
AjuI	GAANNNNNNNTTGG	2 cut(s)	828, 860
AloI	GAACNNNNNNTCC	2 cut(s)	568, 600
AluBI	AGCT	8 cut(s)	132, 251, 878, 938, 1084, 1148, 1690, 1948
AluI	AGCT	8 cut(s)	132, 251, 878, 938, 1084, 1148, 1690, 1948
Alw21I	GWGCWC	1 cut(s)	889
Alw26I	GTCTC	8 cut(s)	759, 1733, 1757, 1796, 1820, 1844, 1868, 1954
AlwI	GGATC	5 cut(s)	73, 366, 708, 1295, 1460
AlwNI	CAGNNNCTG	1 cut(s)	878
AoxI	GGCC	8 cut(s)	111, 390, 971, 1072, 1261, 1474, 1549, 1974
ApeKI	GCWGC	6 cut(s)	869, 878, 1058, 1413, 1590, 1593
ApoI	RAATTY	3 cut(s)	244, 759, 1899
AsiSI	GCGATCGC	1 cut(s)	405
AspLEI	GCGC	6 cut(s)	23, 38, 97, 106, 419, 421
AspS9I	GGNCC	5 cut(s)	390, 590, 603, 609, 1549
AsuC2I	CCSGG	1 cut(s)	465
AsuHPI	GGTGA	8 cut(s)	470, 635, 1229, 1367, 1454, 1505, 1556, 1610
AsuII	TTCGAA	1 cut(s)	1702
AvaII	GGWCC	3 cut(s)	590, 603, 609
BalI	TGGCCA	1 cut(s)	1476
BanI	GGYRCC	1 cut(s)	20
BanII	GRGCYC	1 cut(s)	1282
BauI	CACGAG	1 cut(s)	882
BbsI	GAAGAC	3 cut(s)	144, 1632, 1725
Bbv12I	GWGCWC	1 cut(s)	889
BbvI	GCAGC	6 cut(s)	865, 881, 1045, 1400, 1602, 1605
BccI	CCATC	9 cut(s)	152, 193, 530, 926, 971, 1361, 1418, 1717, 1912
BceAI	ACGGC	1 cut(s)	203
BcgI	CGANNNNNNTGC	2 cut(s)	272, 306
BciT130I	CCWGG	4 cut(s)	317, 588, 607, 1633
BciVI	GTATCC	1 cut(s)	1603
BclI	TGATCA	2 cut(s)	1002, 1600
BcnI	CCSGG	1 cut(s)	465
BcoDI	GTCTC	8 cut(s)	759, 1733, 1757, 1796, 1820, 1844, 1868, 1954
BfaI	CTAG	2 cut(s)	618, 939
BfmI	CTRYAG	2 cut(s)	1059, 1188
BfoI	RGCGCY	1 cut(s)	24
BfuAI	ACCTGC	2 cut(s)	367, 981
BfuI	GTATCC	1 cut(s)	1603
BglI	GCCNNNNNGGC	1 cut(s)	398
BmcAI	AGTACT	1 cut(s)	1049
Bme1390I	CCNGG	5 cut(s)	317, 465, 588, 607, 1633
Bme18I	GGWCC	3 cut(s)	590, 603, 609
BmeRI	GACNNNNNGTC	2 cut(s)	588, 601
BmgBI	CACGTC	2 cut(s)	987, 1106
BmgT120I	GGNCC	5 cut(s)	390, 590, 603, 609, 1549
BmiI	GGNNCC	5 cut(s)	22, 277, 342, 516, 611
BmrFI	CCNGG	5 cut(s)	317, 465, 588, 607, 1633
BmrI	ACTGGG	3 cut(s)	37, 1060, 1615
BmsI	GCATC	7 cut(s)	62, 1243, 1730, 1743, 1767, 1782, 1806
BmuI	ACTGGG	3 cut(s)	37, 1060, 1615
BpiI	GAAGAC	3 cut(s)	144, 1632, 1725
BplI	GAGNNNNNCTC	4 cut(s)	1633, 1665, 1925, 1957
BpmI	CTGGAG	8 cut(s)	71, 323, 356, 570, 978, 1806, 1830, 1854
Bpu10I	CCTNAGC	1 cut(s)	1691
Bpu14I	TTCGAA	1 cut(s)	1702
BpuMI	CCSGG	1 cut(s)	465
BsaBI	GATNNNNATC	1 cut(s)	1614
BsaHI	GRCGYC	4 cut(s)	5, 21, 149, 267
BsaJI	CCNNGG	4 cut(s)	178, 393, 717, 1477
BsaWI	WCCGGW	1 cut(s)	490
BsaXI	ACNNNNNCTCC	2 cut(s)	568, 598
Bsc4I	CCNNNNNNNGG	5 cut(s)	57, 470, 524, 620, 1655
Bse1I	ACTGG	5 cut(s)	43, 695, 1055, 1313, 1610
Bse3DI	GCAATG	1 cut(s)	288
Bse8I	GATNNNNATC	1 cut(s)	1614
BseBI	CCWGG	4 cut(s)	317, 588, 607, 1633
BseDI	CCNNGG	4 cut(s)	178, 393, 717, 1477
BseGI	GGATG	8 cut(s)	163, 541, 727, 811, 937, 982, 1459, 1745
BseJI	GATNNNNATC	1 cut(s)	1614
BseLI	CCNNNNNNNGG	5 cut(s)	57, 470, 524, 620, 1655
BseMI	GCAATG	1 cut(s)	288
BseMII	CTCAG	9 cut(s)	569, 804, 1023, 1695, 1705, 1752, 1827, 1851, 1956
BseNI	ACTGG	5 cut(s)	43, 695, 1055, 1313, 1610
BsePI	GCGCGC	1 cut(s)	417
BseRI	GAGGAG	2 cut(s)	138, 365
BseXI	GCAGC	6 cut(s)	865, 881, 1045, 1400, 1602, 1605
BsgI	GTGCAG	1 cut(s)	1009
Bsh1236I	CGCG	7 cut(s)	36, 97, 104, 395, 407, 417, 419
Bsh1285I	CGRYCG	1 cut(s)	405
BshFI	GGCC	8 cut(s)	113, 392, 973, 1074, 1263, 1476, 1551, 1976
BshNI	GGYRCC	1 cut(s)	20
BsiEI	CGRYCG	1 cut(s)	405
BsiHKAI	GWGCWC	1 cut(s)	889
BsiSI	CCGG	6 cut(s)	114, 254, 279, 464, 491, 974
BslFI	GGGAC	2 cut(s)	182, 1116
BslI	CCNNNNNNNGG	5 cut(s)	57, 470, 524, 620, 1655
BsmAI	GTCTC	8 cut(s)	759, 1733, 1757, 1796, 1820, 1844, 1868, 1954
BsmFI	GGGAC	2 cut(s)	182, 1116
BsmI	GAATGC	2 cut(s)	378, 534
BsnI	GGCC	8 cut(s)	113, 392, 973, 1074, 1263, 1476, 1551, 1976
Bsp119I	TTCGAA	1 cut(s)	1702
Bsp1286I	GDGCHC	2 cut(s)	889, 1282
Bsp1407I	TGTACA	1 cut(s)	1292
Bsp143I	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
Bsp19I	CCATGG	1 cut(s)	1477
BspANI	GGCC	8 cut(s)	113, 392, 973, 1074, 1263, 1476, 1551, 1976
BspCNI	CTCAG	9 cut(s)	568, 805, 1024, 1694, 1704, 1753, 1828, 1852, 1955
BspFNI	CGCG	7 cut(s)	36, 97, 104, 395, 407, 417, 419
BspLI	GGNNCC	5 cut(s)	22, 277, 342, 516, 611
BspMAI	CTGCAG	2 cut(s)	1063, 1192
BspMI	ACCTGC	2 cut(s)	367, 981
BspPI	GGATC	5 cut(s)	73, 366, 708, 1295, 1460
BspQI	GCTCTTC	1 cut(s)	1580
BspT104I	TTCGAA	1 cut(s)	1702
BspT107I	GGYRCC	1 cut(s)	20
BsrBI	CCGCTC	2 cut(s)	435, 1525
BsrDI	GCAATG	1 cut(s)	288
BsrGI	TGTACA	1 cut(s)	1292
BsrI	ACTGG	5 cut(s)	43, 695, 1055, 1313, 1610
BssECI	CCNNGG	4 cut(s)	178, 393, 717, 1477
BssHII	GCGCGC	1 cut(s)	417
BssMI	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
BssNAI	GTATAC	1 cut(s)	927
BssNI	GRCGYC	4 cut(s)	5, 21, 149, 267
BssSI	CACGAG	1 cut(s)	882
BssT1I	CCWWGG	2 cut(s)	717, 1477
Bst1107I	GTATAC	1 cut(s)	927
Bst2BI	CACGAG	1 cut(s)	882
Bst2UI	CCWGG	4 cut(s)	317, 588, 607, 1633
Bst4CI	ACNGT	1 cut(s)	1925
Bst6I	CTCTTC	3 cut(s)	771, 1580, 1952
BstACI	GRCGYC	4 cut(s)	5, 21, 149, 267
BstAPI	GCANNNNNTGC	1 cut(s)	878
BstAUI	TGTACA	1 cut(s)	1292
BstBI	TTCGAA	1 cut(s)	1702
BstC8I	GCNNGC	4 cut(s)	93, 415, 419, 654
BstDEI	CTNAG	9 cut(s)	555, 813, 1032, 1681, 1691, 1761, 1836, 1860, 1942
BstDSI	CCRYGG	2 cut(s)	393, 1477
BstENI	CCTNNNNNAGG	2 cut(s)	55, 522
BstF5I	GGATG	8 cut(s)	163, 541, 727, 811, 937, 982, 1459, 1745
BstFNI	CGCG	7 cut(s)	36, 97, 104, 395, 407, 417, 419
BstH2I	RGCGCY	1 cut(s)	24
BstHHI	GCGC	6 cut(s)	23, 38, 97, 106, 419, 421
BstKTI	GATC	8 cut(s)	81, 361, 405, 716, 1005, 1303, 1468, 1603
BstMAI	GTCTC	8 cut(s)	759, 1733, 1757, 1796, 1820, 1844, 1868, 1954
BstMBI	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
BstMCI	CGRYCG	1 cut(s)	405
BstNI	CCWGG	4 cut(s)	317, 588, 607, 1633
BstNSI	RCATGY	2 cut(s)	869, 1915
BstSCI	CCNGG	5 cut(s)	315, 463, 586, 605, 1631
BstSFI	CTRYAG	2 cut(s)	1059, 1188
BstUI	CGCG	7 cut(s)	36, 97, 104, 395, 407, 417, 419
BstV1I	GCAGC	6 cut(s)	865, 881, 1045, 1400, 1602, 1605
BstV2I	GAAGAC	3 cut(s)	144, 1632, 1725
BstXI	CCANNNNNNTGG	1 cut(s)	600
BstZ17I	GTATAC	1 cut(s)	927
BsuI	GTATCC	1 cut(s)	1603
BsuRI	GGCC	8 cut(s)	113, 392, 973, 1074, 1263, 1476, 1551, 1976
BtgI	CCRYGG	2 cut(s)	393, 1477
BtgZI	GCGATG	2 cut(s)	212, 1707
BtrI	CACGTC	2 cut(s)	987, 1106
BtsCI	GGATG	8 cut(s)	163, 541, 727, 811, 937, 982, 1459, 1745
BtsI	GCAGTG	2 cut(s)	663, 1666
BtsIMutI	CAGTG	7 cut(s)	663, 702, 782, 1021, 1392, 1603, 1666
BveI	ACCTGC	2 cut(s)	367, 981
Cac8I	GCNNGC	4 cut(s)	93, 415, 419, 654
CaiI	CAGNNNCTG	1 cut(s)	878
CfoI	GCGC	6 cut(s)	23, 38, 97, 106, 419, 421
Cfr13I	GGNCC	5 cut(s)	390, 590, 603, 609, 1549
Cfr42I	CCGCGG	1 cut(s)	396
CseI	GACGC	2 cut(s)	138, 1118
CsiI	ACCWGGT	1 cut(s)	1631
Csp6I	GTAC	5 cut(s)	27, 175, 863, 1048, 1293
CviQI	GTAC	5 cut(s)	27, 175, 863, 1048, 1293
DdeI	CTNAG	9 cut(s)	555, 813, 1032, 1681, 1691, 1761, 1836, 1860, 1942
DinI	GGCGCC	1 cut(s)	22
DpnI	GATC	8 cut(s)	80, 360, 404, 715, 1004, 1302, 1467, 1602
DpnII	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
DrdI	GACNNNNNNGTC	1 cut(s)	266
DriI	GACNNNNNGTC	2 cut(s)	588, 601
DseDI	GACNNNNNNGTC	1 cut(s)	266
EaeI	YGGCCR	2 cut(s)	111, 1474
Eam1104I	CTCTTC	3 cut(s)	771, 1580, 1952
Eam1105I	GACNNNNNGTC	2 cut(s)	588, 601
EarI	CTCTTC	3 cut(s)	771, 1580, 1952
EciI	GGCGGA	1 cut(s)	272
Eco130I	CCWWGG	2 cut(s)	717, 1477
Eco24I	GRGCYC	1 cut(s)	1282
Eco47I	GGWCC	3 cut(s)	590, 603, 609
Eco57I	CTGAAG	6 cut(s)	654, 725, 806, 1242, 1719, 1878
EcoNI	CCTNNNNNAGG	2 cut(s)	55, 522
EcoRI	GAATTC	1 cut(s)	244
EcoRII	CCWGG	4 cut(s)	315, 586, 605, 1631
EcoT14I	CCWWGG	2 cut(s)	717, 1477
EcoT38I	GRGCYC	1 cut(s)	1282
EgeI	GGCGCC	1 cut(s)	22
EheI	GGCGCC	1 cut(s)	22
ErhI	CCWWGG	2 cut(s)	717, 1477
FaqI	GGGAC	2 cut(s)	182, 1116
FauI	CCCGC	2 cut(s)	158, 621
FauNDI	CATATG	1 cut(s)	1176
FbaI	TGATCA	2 cut(s)	1002, 1600
FblI	GTMKAC	1 cut(s)	926
FokI	GGATG	8 cut(s)	170, 548, 734, 818, 944, 989, 1466, 1732
FriOI	GRGCYC	1 cut(s)	1282
FspBI	CTAG	2 cut(s)	618, 939
GlaI	GCGC	6 cut(s)	22, 37, 96, 105, 418, 420
GsuI	CTGGAG	8 cut(s)	71, 323, 356, 570, 978, 1806, 1830, 1854
HaeII	RGCGCY	1 cut(s)	24
HaeIII	GGCC	8 cut(s)	113, 392, 973, 1074, 1263, 1476, 1551, 1976
HapII	CCGG	6 cut(s)	114, 254, 279, 464, 491, 974
HgaI	GACGC	2 cut(s)	138, 1118
HhaI	GCGC	6 cut(s)	23, 38, 97, 106, 419, 421
Hin1I	GRCGYC	4 cut(s)	5, 21, 149, 267
Hin6I	GCGC	6 cut(s)	21, 36, 95, 104, 417, 419
HinP1I	GCGC	6 cut(s)	21, 36, 95, 104, 417, 419
HpaII	CCGG	6 cut(s)	114, 254, 279, 464, 491, 974
HphI	GGTGA	8 cut(s)	470, 635, 1229, 1367, 1454, 1505, 1556, 1610
Hpy166II	GTNNAC	5 cut(s)	819, 927, 996, 1133, 1293
Hpy8I	GTNNAC	5 cut(s)	819, 927, 996, 1133, 1293
Hpy99I	CGWCG	6 cut(s)	10, 242, 269, 272, 386, 1774
HpyCH4III	ACNGT	1 cut(s)	1925
HpyCH4IV	ACGT	3 cut(s)	267, 986, 1105
HpyF3I	CTNAG	9 cut(s)	555, 813, 1032, 1681, 1691, 1761, 1836, 1860, 1942
HpySE526I	ACGT	3 cut(s)	267, 986, 1105
Hsp92I	GRCGYC	4 cut(s)	5, 21, 149, 267
HspAI	GCGC	6 cut(s)	21, 36, 95, 104, 417, 419
KasI	GGCGCC	1 cut(s)	20
Ksp22I	TGATCA	2 cut(s)	1002, 1600
KspI	CCGCGG	1 cut(s)	396
Kzo9I	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
LguI	GCTCTTC	1 cut(s)	1580
LmnI	GCTCC	8 cut(s)	256, 281, 304, 503, 520, 935, 1081, 1243
Lsp1109I	GCAGC	6 cut(s)	865, 881, 1045, 1400, 1602, 1605
LweI	GCATC	7 cut(s)	62, 1243, 1730, 1743, 1767, 1782, 1806
MabI	ACCWGGT	1 cut(s)	1631
MaeI	CTAG	2 cut(s)	618, 939
MaeII	ACGT	3 cut(s)	267, 986, 1105
MaeIII	GTNAC	4 cut(s)	982, 1027, 1106, 1442
MalI	GATC	8 cut(s)	80, 360, 404, 715, 1004, 1302, 1467, 1602
MbiI	CCGCTC	2 cut(s)	435, 1525
MboI	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
MfeI	CAATTG	2 cut(s)	507, 1296
MhlI	GDGCHC	2 cut(s)	889, 1282
MlsI	TGGCCA	1 cut(s)	1476
MluCI	AATT	8 cut(s)	244, 507, 642, 732, 759, 1159, 1296, 1899
MluNI	TGGCCA	1 cut(s)	1476
Mly113I	GGCGCC	1 cut(s)	21
MlyI	GAGTC	5 cut(s)	164, 455, 577, 824, 917
MmeI	TCCRAC	1 cut(s)	1752
Mox20I	TGGCCA	1 cut(s)	1476
MscI	TGGCCA	1 cut(s)	1476
MslI	CAYNNNNRTG	2 cut(s)	1251, 1578
Msp20I	TGGCCA	1 cut(s)	1476
MspA1I	CMGCKG	2 cut(s)	395, 1596
MspI	CCGG	6 cut(s)	114, 254, 279, 464, 491, 974
MspR9I	CCNGG	5 cut(s)	317, 465, 588, 607, 1633
MunI	CAATTG	2 cut(s)	507, 1296
Mva1269I	GAATGC	2 cut(s)	378, 534
MvaI	CCWGG	4 cut(s)	317, 588, 607, 1633
MvnI	CGCG	7 cut(s)	36, 97, 104, 395, 407, 417, 419
NarI	GGCGCC	1 cut(s)	21
NciI	CCSGG	1 cut(s)	465
NcoI	CCATGG	1 cut(s)	1477
NdeI	CATATG	1 cut(s)	1176
NdeII	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
NlaIV	GGNNCC	5 cut(s)	22, 277, 342, 516, 611
NmuCI	GTSAC	3 cut(s)	982, 1106, 1442
NspI	RCATGY	2 cut(s)	869, 1915
NspV	TTCGAA	1 cut(s)	1702
PaqCI	CACCTGC	1 cut(s)	981
PauI	GCGCGC	1 cut(s)	417
PciI	ACATGT	1 cut(s)	1911
PciSI	GCTCTTC	1 cut(s)	1580
PcsI	WCGNNNNNNNCGW	1 cut(s)	367
PctI	GAATGC	2 cut(s)	378, 534
PfeI	GAWTC	6 cut(s)	298, 331, 364, 953, 1570, 1644
PflFI	GACNNNGTC	1 cut(s)	1768
PfoI	TCCNGGA	1 cut(s)	605
Ple19I	CGATCG	1 cut(s)	405
PleI	GAGTC	5 cut(s)	164, 454, 577, 823, 916
PluTI	GGCGCC	1 cut(s)	24
PpsI	GAGTC	5 cut(s)	164, 454, 577, 823, 916
PscI	ACATGT	1 cut(s)	1911
Psp6I	CCWGG	4 cut(s)	315, 586, 605, 1631
PspGI	CCWGG	4 cut(s)	315, 586, 605, 1631
PspN4I	GGNNCC	5 cut(s)	22, 277, 342, 516, 611
PspPI	GGNCC	5 cut(s)	390, 590, 603, 609, 1549
PstI	CTGCAG	2 cut(s)	1063, 1192
PstNI	CAGNNNCTG	1 cut(s)	878
PsyI	GACNNNGTC	1 cut(s)	1768
PteI	GCGCGC	1 cut(s)	417
PvuI	CGATCG	1 cut(s)	405
RgaI	GCGATCGC	1 cut(s)	405
RsaI	GTAC	5 cut(s)	28, 176, 864, 1049, 1294
RsaNI	GTAC	5 cut(s)	27, 175, 863, 1048, 1293
RseI	CAYNNNNRTG	2 cut(s)	1251, 1578
SacII	CCGCGG	1 cut(s)	396
SapI	GCTCTTC	1 cut(s)	1580
Sau3AI	GATC	8 cut(s)	78, 358, 402, 713, 1002, 1300, 1465, 1600
Sau96I	GGNCC	5 cut(s)	390, 590, 603, 609, 1549
ScaI	AGTACT	1 cut(s)	1049
SchI	GAGTC	5 cut(s)	164, 455, 577, 824, 917
ScrFI	CCNGG	5 cut(s)	317, 465, 588, 607, 1633
SduI	GDGCHC	2 cut(s)	889, 1282
SexAI	ACCWGGT	1 cut(s)	1631
SfaAI	GCGATCGC	1 cut(s)	405
SfaNI	GCATC	7 cut(s)	62, 1243, 1730, 1743, 1767, 1782, 1806
SfcI	CTRYAG	2 cut(s)	1059, 1188
SfoI	GGCGCC	1 cut(s)	22
Sfr303I	CCGCGG	1 cut(s)	396
SfuI	TTCGAA	1 cut(s)	1702
SgfI	GCGATCGC	1 cut(s)	405
SgrBI	CCGCGG	1 cut(s)	396
SinI	GGWCC	3 cut(s)	590, 603, 609
SmiMI	CAYNNNNRTG	2 cut(s)	1251, 1578
Sse9I	AATT	8 cut(s)	244, 507, 642, 732, 759, 1159, 1296, 1899
SspDI	GGCGCC	1 cut(s)	20
SspMI	CTAG	2 cut(s)	618, 939
StyD4I	CCNGG	5 cut(s)	315, 463, 586, 605, 1631
StyI	CCWWGG	2 cut(s)	717, 1477
TaaI	ACNGT	1 cut(s)	1925
TaiI	ACGT	3 cut(s)	270, 989, 1108
TaqI	TCGA	4 cut(s)	240, 324, 384, 1702
TaqII	GACCGA	1 cut(s)	1313
TasI	AATT	8 cut(s)	244, 507, 642, 732, 759, 1159, 1296, 1899
TatI	WGTACW	4 cut(s)	26, 862, 1047, 1292
TauI	GCSGC	9 cut(s)	149, 165, 276, 395, 398, 401, 410, 413, 438
TfiI	GAWTC	6 cut(s)	298, 331, 364, 953, 1570, 1644
TscAI	CASTG	7 cut(s)	663, 702, 789, 1021, 1399, 1610, 1673
TseFI	GTSAC	3 cut(s)	982, 1106, 1442
TseI	GCWGC	6 cut(s)	869, 878, 1058, 1413, 1590, 1593
Tsp45I	GTSAC	3 cut(s)	982, 1106, 1442
TspGWI	ACGGA	2 cut(s)	944, 1131
TspRI	CASTG	7 cut(s)	663, 702, 789, 1021, 1399, 1610, 1673
Tth111I	GACNNNGTC	1 cut(s)	1768
VpaK11BI	GGWCC	3 cut(s)	590, 603, 609
XagI	CCTNNNNNAGG	2 cut(s)	55, 522
XapI	RAATTY	3 cut(s)	244, 759, 1899
XceI	RCATGY	2 cut(s)	869, 1915
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1082
XmiI	GTMKAC	1 cut(s)	926
XspI	CTAG	2 cut(s)	618, 939
ZraI	GACGTC	1 cut(s)	268
ZrmI	AGTACT	1 cut(s)	1049

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.