Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0007443

Physical Location & Seq

Genomic Coordinates Reverse (-)

3272162 .. 3277799

Gene Structure 5638 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G001780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGCTCGATTATCTGACTCACCCAACGAGTATCCAACTCGGAGCCCGCCGGAAAATATCACATCTCCAAAGTACCGTCCTTCCTTCCACTCATTCACTCTCCACTGATCAAAAAACACTCTCTCCCACAATAATGGCGTCGTCTTATCTCGGCGCCTGTACTCCACGCGCCTCCCAGTTCTCCTTACACAGGCACAGACACCGGTGCCCGATCCTTCTCGAGCAGGCGCGAACCGCGCCGTTCGCCGGAAACAGAGGAGTGAGCTTGAAGGTCAGGGCGGCGTCTTCGGATGGCGGCGGCGGGGACTCGTACCTCGGAATGTGGAAGAAGGCGATGGAGAACGAGAAGAAAGCCGTCAAGTTCCAGAAAATCGTTGAGAATTCAGCTCCGGCGGACAACGACGTCGCCGGCGCCGGCGAGAGCATTGCGGAGAATCTGGAGCATAAGAGCCAGGAGTTCGAGAAGATTCTGGAGGTTCCGAAGGAGGAGAGGGATCGGATTCAGCGAATGCAGGTCGTCGATAGGGCCGCGGCGGCGATCGCGGCGGCTCGCGCGCTTTTGAAAGAGAGCGGCTTGAAGAAGGAGTCCGGTTCCGGTGAGCCGGGTTCGGGTGGAGTGAGGACTGAACCGGATTTGGGTGGAGTGAGGACTGAACCGGATTTGAGTGGAGCAATTGAGGCTCCTGATGAAGGAATGCAGGATGGGAGTATATCTGTGCCTCAGTCAGAAGAAAGTTCAGGAACTTGGACTCCAGGTCCAGACTTTTGGTCCTGGACCCCGCCGAGTAGTGATAGTTCAGATGATATAATTGACTTGCAGGCAGCGAAAAAGCCTTCAGCAAATCCAAACTTGAGTTTGCCAGTGAAGGAGAAAGAGCGATCCTTGGATGTTCTCTCAATTCCCCTTCAGAGTATTCTGTCTGAAATTCCTCTTCCCCCTTTGCAATCACTGAAGGAGGTCAAGAAAGTGGATGTCGCTGAGTCCACTTCCACAAAAGAGGAACATGAACTTGGACATGAGTTTTCAGTACATGCAGCAGAAGCTGCTCGTGCTCTTGATAAGGCGGATCAGGAGTCATTATCTGGTGTGTATACGGATGGAGCTAGGTGGTGGAAGGAATCTGGAGTTGAGCAAAGGCCGGATGGCGTGACGTGCAGGTGGACAATGATCAGAGGTGTCAGTGCCGACCAAGTTACTGAGTGGCAAGATAAGTACTGGGAGGCTGCAGATGAGTTAGGCCACAAGGAGCTTGGTTCAGAAAAATCGGGACGTGACGCATACGGAAATGTTTGGCGTGAACATTGGAAAGAAGCTATGTGGCAGAATTGTGGGCTTGTGCATATGGAGAAATCTGCAGACAAGTGGGGAAAGAATGGTAGAGGTGATGAATGGCAAGAGAAATGGTGGGAGCATTATGATGCTTCAGGCCAAGCAGAGAAATGGGCTCATAAGTGGTGTACAATTGATCCAAACACACCAGTTGATGTTGGTCATGCTCACATTTGGCATGAAAGGTGGGGTGAAACATATGATGGACATGGTGGGAGTAATAAATACACTGACAAATGGGCTGAACGCTGCGAGGGAGATGGTTGGTCAAAATGGGGTGACAAATGGGATGAACATTTTGATCCAAATGGCCATGGTGTGAAGCAGGGTGAAACATGGTGGGAAGGCAAGTATGGAGAACGGTGGAACAAAACATGGGGCGAGGGCCACAATGGTTCAGGGTGGATTCACAAGTATGGGAAGAGCAGCAGCGGTGATCACTGGGATACACATGAGCAGGAAGACACCTGGTATGAGAGATTCCCTCACTTCGGTTTCTATCACTGCTTTGAAAACTCAGTTCAGCTCAGGGAAACTTCATCCGAGATGCCTTCTGAGACTTCGTCGGAGATGCCTTCATCAGAGATGCTTTCAGAGACTTCATCAGAGATGCCTCCAGAGACTTCATCTGAGATACCTTCAGAGACTTCATCAGAGATACCTTCAGAAATTCCATCGGACATGTCATCCAACGGTCCATTGGAGTTGCCCTCAGAGCTTCTATTGAAGAGACAATCAGAGGTGGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

692

Amino Acids

77.19

Weight (kDa)

5.12

Isoelectric Point (pI)

46.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55760 AT3G55760 AT3G55760
fragaria_vesca	FvH4_4g01790 FvH4_4g01790
malus_domestica	MD13G1202100.v1.1 MD16G1202300.v1.1
prunus_persica	Prupe.1G023800_v2.0.a1
pyrus_communis	pycom16g17070
rosa_chinensis	RchiOBHm_Chr4g0388701 RchiOBHm_Chr4g0388821
rosa_laevigata	RLG00000010026
rosa_multiflora	Rmu_sc0000697.1_g000013 Rmu_sc0010392.1_g000002 Rmu_sc0016023.1_g000002
rosa_roxburghii	Rroxscaffold_5G00335100
rosa_rugosa	Rorug03G0320100
rosa_samantha	Rh4AG024100 Rh4AG024900 Rh4BG017900 Rh4CG026900 Rh4CG027600 Rh4DG018200
rosa_wichuraiana	Rw4G001740 Rw4G001780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1146
AasI	GACNNNNNNGTC	1 cut(s)	401
AatII	GACGTC	1 cut(s)	405
Acc36I	ACCTGC	2 cut(s)	502, 1146
AccB1I	GGYRCC	3 cut(s)	152, 204, 410
AccBSI	CCGCTC	1 cut(s)	570
AccI	GTMKAC	1 cut(s)	1091
AccII	CGCG	7 cut(s)	168, 229, 236, 530, 542, 552, 554
AclWI	GGATC	6 cut(s)	205, 501, 873, 1074, 1460, 1625
AcoI	YGGCCR	1 cut(s)	1639
AcsI	RAATTY	3 cut(s)	379, 924, 1998
AcuI	CTGAAG	6 cut(s)	819, 890, 971, 1407, 1953, 1977
AcyI	GRCGYC	5 cut(s)	137, 153, 281, 402, 411
AfaI	GTAC	6 cut(s)	73, 160, 311, 1029, 1214, 1459
AfiI	CCNNNNNNNGG	6 cut(s)	189, 245, 608, 635, 689, 1820
AflIII	ACRYGT	1 cut(s)	2010
AgeI	ACCGGT	1 cut(s)	201
AgsI	TTSAA	5 cut(s)	268, 562, 577, 1841, 2056
AhdI	GACNNNNNGTC	2 cut(s)	753, 766
AjiI	CACGTC	2 cut(s)	1152, 1271
AjnI	CCWGG	4 cut(s)	450, 751, 770, 1796
AjuI	GAANNNNNNNTTGG	2 cut(s)	993, 1025
AloI	GAACNNNNNNTCC	2 cut(s)	733, 765
AluBI	AGCT	8 cut(s)	264, 386, 1043, 1103, 1249, 1313, 1855, 2047
AluI	AGCT	8 cut(s)	264, 386, 1043, 1103, 1249, 1313, 1855, 2047
Alw21I	GWGCWC	1 cut(s)	1054
Alw26I	GTCTC	5 cut(s)	1880, 1919, 1943, 1967, 2053
AlwI	GGATC	6 cut(s)	205, 501, 873, 1074, 1460, 1625
AlwNI	CAGNNNCTG	1 cut(s)	1043
Ama87I	CYCGRG	1 cut(s)	218
AoxI	GGCC	7 cut(s)	525, 1136, 1237, 1426, 1639, 1714, 2073
ApeKI	GCWGC	7 cut(s)	821, 1034, 1043, 1223, 1578, 1755, 1758
ApoI	RAATTY	3 cut(s)	379, 924, 1998
AsiGI	ACCGGT	1 cut(s)	201
AsiSI	GCGATCGC	1 cut(s)	540
AspLEI	GCGC	7 cut(s)	155, 170, 229, 238, 413, 554, 556
AspS9I	GGNCC	6 cut(s)	525, 755, 768, 774, 1714, 2024
AsuC2I	CCSGG	1 cut(s)	603
AsuHPI	GGTGA	7 cut(s)	11, 608, 1394, 1532, 1619, 1670, 1775
AvaI	CYCGRG	1 cut(s)	218
AvaII	GGWCC	4 cut(s)	755, 768, 774, 2024
BaeGI	GKGCMC	1 cut(s)	209
BalI	TGGCCA	1 cut(s)	1641
BanI	GGYRCC	3 cut(s)	152, 204, 410
BanII	GRGCYC	2 cut(s)	46, 1447
BauI	CACGAG	1 cut(s)	1047
BbsI	GAAGAC	2 cut(s)	276, 1797
Bbv12I	GWGCWC	1 cut(s)	1054
BbvI	GCAGC	7 cut(s)	833, 1030, 1046, 1210, 1565, 1767, 1770
BccI	CCATC	8 cut(s)	284, 328, 695, 1091, 1136, 1526, 1583, 2011
BceAI	ACGGC	2 cut(s)	223, 338
BcgI	CGANNNNNNTGC	2 cut(s)	407, 441
BciT130I	CCWGG	4 cut(s)	452, 753, 772, 1798
BciVI	GTATCC	2 cut(s)	41, 1768
BclI	TGATCA	3 cut(s)	106, 1167, 1765
BcnI	CCSGG	1 cut(s)	603
BcoDI	GTCTC	5 cut(s)	1880, 1919, 1943, 1967, 2053
BfaI	CTAG	1 cut(s)	1104
BfmI	CTRYAG	2 cut(s)	1224, 1353
BfoI	RGCGCY	2 cut(s)	156, 414
BfuAI	ACCTGC	2 cut(s)	502, 1146
BfuI	GTATCC	2 cut(s)	41, 1768
BglI	GCCNNNNNGGC	1 cut(s)	533
BmcAI	AGTACT	1 cut(s)	1214
Bme1390I	CCNGG	5 cut(s)	452, 603, 753, 772, 1798
Bme18I	GGWCC	4 cut(s)	755, 768, 774, 2024
BmeRI	GACNNNNNGTC	2 cut(s)	753, 766
BmeT110I	CYCGRG	1 cut(s)	218
BmgBI	CACGTC	2 cut(s)	1152, 1271
BmgT120I	GGNCC	6 cut(s)	525, 755, 768, 774, 1714, 2024
BmiI	GGNNCC	8 cut(s)	43, 154, 206, 412, 477, 592, 681, 776
BmrFI	CCNGG	5 cut(s)	452, 603, 753, 772, 1798
BmrI	ACTGGG	3 cut(s)	169, 1225, 1780
BmsI	GCATC	5 cut(s)	1408, 1866, 1890, 1905, 1929
BmuI	ACTGGG	3 cut(s)	169, 1225, 1780
BpiI	GAAGAC	2 cut(s)	276, 1797
BplI	GAGNNNNNCTC	4 cut(s)	1798, 1830, 2024, 2056
BpmI	CTGGAG	5 cut(s)	458, 491, 735, 1143, 1929
Bpu10I	CCTNAGC	1 cut(s)	1856
BpuEI	CTTGAG	1 cut(s)	871
BpuMI	CCSGG	1 cut(s)	603
BsaHI	GRCGYC	5 cut(s)	137, 153, 281, 402, 411
BsaJI	CCNNGG	4 cut(s)	313, 528, 882, 1642
BsaWI	WCCGGW	5 cut(s)	201, 587, 593, 628, 655
BsaXI	ACNNNNNCTCC	4 cut(s)	106, 136, 733, 763
Bsc4I	CCNNNNNNNGG	6 cut(s)	189, 245, 608, 635, 689, 1820
Bse118I	RCCGGY	3 cut(s)	201, 407, 413
Bse1I	ACTGG	5 cut(s)	175, 860, 1220, 1478, 1775
Bse3DI	GCAATG	1 cut(s)	423
BseBI	CCWGG	4 cut(s)	452, 753, 772, 1798
BseDI	CCNNGG	4 cut(s)	313, 528, 882, 1642
BseGI	GGATG	9 cut(s)	295, 706, 892, 976, 1102, 1147, 1624, 1868, 2015
BseLI	CCNNNNNNNGG	6 cut(s)	189, 245, 608, 635, 689, 1820
BseMI	GCAATG	1 cut(s)	423
BseMII	CTCAG	8 cut(s)	734, 969, 1188, 1860, 1870, 1875, 1950, 2055
BseNI	ACTGG	5 cut(s)	175, 860, 1220, 1478, 1775
BsePI	GCGCGC	1 cut(s)	552
BseRI	GAGGAG	2 cut(s)	270, 500
BseSI	GKGCMC	1 cut(s)	209
BseXI	GCAGC	7 cut(s)	833, 1030, 1046, 1210, 1565, 1767, 1770
BsgI	GTGCAG	1 cut(s)	1174
Bsh1236I	CGCG	7 cut(s)	168, 229, 236, 530, 542, 552, 554
Bsh1285I	CGRYCG	1 cut(s)	540
BshFI	GGCC	7 cut(s)	527, 1138, 1239, 1428, 1641, 1716, 2075
BshNI	GGYRCC	3 cut(s)	152, 204, 410
BshTI	ACCGGT	1 cut(s)	201
BsiEI	CGRYCG	1 cut(s)	540
BsiHKAI	GWGCWC	1 cut(s)	1054
BsiHKCI	CYCGRG	1 cut(s)	218
BslFI	GGGAC	2 cut(s)	317, 1281
BslI	CCNNNNNNNGG	6 cut(s)	189, 245, 608, 635, 689, 1820
BsmAI	GTCTC	5 cut(s)	1880, 1919, 1943, 1967, 2053
BsmFI	GGGAC	2 cut(s)	317, 1281
BsmI	GAATGC	2 cut(s)	513, 699
BsnI	GGCC	7 cut(s)	527, 1138, 1239, 1428, 1641, 1716, 2075
BsoBI	CYCGRG	1 cut(s)	218
Bsp1286I	GDGCHC	4 cut(s)	46, 209, 1054, 1447
Bsp1407I	TGTACA	1 cut(s)	1457
Bsp19I	CCATGG	1 cut(s)	1642
BspANI	GGCC	7 cut(s)	527, 1138, 1239, 1428, 1641, 1716, 2075
BspCNI	CTCAG	8 cut(s)	733, 970, 1189, 1859, 1869, 1876, 1951, 2054
BspFNI	CGCG	7 cut(s)	168, 229, 236, 530, 542, 552, 554
BspLI	GGNNCC	8 cut(s)	43, 154, 206, 412, 477, 592, 681, 776
BspMAI	CTGCAG	2 cut(s)	1228, 1357
BspMI	ACCTGC	2 cut(s)	502, 1146
BspPI	GGATC	6 cut(s)	205, 501, 873, 1074, 1460, 1625
BspQI	GCTCTTC	1 cut(s)	1745
BspT107I	GGYRCC	3 cut(s)	152, 204, 410
BsrBI	CCGCTC	1 cut(s)	570
BsrDI	GCAATG	1 cut(s)	423
BsrFI	RCCGGY	3 cut(s)	201, 407, 413
BsrGI	TGTACA	1 cut(s)	1457
BsrI	ACTGG	5 cut(s)	175, 860, 1220, 1478, 1775
BssAI	RCCGGY	3 cut(s)	201, 407, 413
BssECI	CCNNGG	4 cut(s)	313, 528, 882, 1642
BssHII	GCGCGC	1 cut(s)	552
BssNAI	GTATAC	1 cut(s)	1092
BssNI	GRCGYC	5 cut(s)	137, 153, 281, 402, 411
BssSI	CACGAG	1 cut(s)	1047
BssT1I	CCWWGG	2 cut(s)	882, 1642
Bst1107I	GTATAC	1 cut(s)	1092
Bst2BI	CACGAG	1 cut(s)	1047
Bst2UI	CCWGG	4 cut(s)	452, 753, 772, 1798
Bst4CI	ACNGT	3 cut(s)	76, 1692, 2024
Bst6I	CTCTTC	3 cut(s)	936, 1745, 2051
BstACI	GRCGYC	5 cut(s)	137, 153, 281, 402, 411
BstAPI	GCANNNNNTGC	1 cut(s)	1043
BstAUI	TGTACA	1 cut(s)	1457
BstC8I	GCNNGC	7 cut(s)	46, 225, 409, 415, 550, 554, 819
BstDEI	CTNAG	8 cut(s)	720, 978, 1197, 1846, 1856, 1884, 1959, 2041
BstDSI	CCRYGG	2 cut(s)	528, 1642
BstENI	CCTNNNNNAGG	2 cut(s)	187, 687
BstF5I	GGATG	9 cut(s)	295, 706, 892, 976, 1102, 1147, 1624, 1868, 2015
BstFNI	CGCG	7 cut(s)	168, 229, 236, 530, 542, 552, 554
BstH2I	RGCGCY	2 cut(s)	156, 414
BstHHI	GCGC	7 cut(s)	155, 170, 229, 238, 413, 554, 556
BstMAI	GTCTC	5 cut(s)	1880, 1919, 1943, 1967, 2053
BstMCI	CGRYCG	1 cut(s)	540
BstNI	CCWGG	4 cut(s)	452, 753, 772, 1798
BstNSI	RCATGY	2 cut(s)	1034, 2014
BstSCI	CCNGG	5 cut(s)	450, 601, 751, 770, 1796
BstSFI	CTRYAG	2 cut(s)	1224, 1353
BstSLI	GKGCMC	1 cut(s)	209
BstUI	CGCG	7 cut(s)	168, 229, 236, 530, 542, 552, 554
BstV1I	GCAGC	7 cut(s)	833, 1030, 1046, 1210, 1565, 1767, 1770
BstV2I	GAAGAC	2 cut(s)	276, 1797
BstXI	CCANNNNNNTGG	2 cut(s)	133, 765
BstZ17I	GTATAC	1 cut(s)	1092
BsuI	GTATCC	2 cut(s)	41, 1768
BsuRI	GGCC	7 cut(s)	527, 1138, 1239, 1428, 1641, 1716, 2075
BtgI	CCRYGG	2 cut(s)	528, 1642
BtgZI	GCGATG	1 cut(s)	347
BtrI	CACGTC	2 cut(s)	1152, 1271
BtsCI	GGATG	9 cut(s)	295, 706, 892, 976, 1102, 1147, 1624, 1868, 2015
BtsI	GCAGTG	1 cut(s)	1831
BtsIMutI	CAGTG	7 cut(s)	102, 867, 947, 1186, 1557, 1768, 1831
BveI	ACCTGC	2 cut(s)	502, 1146
Cac8I	GCNNGC	7 cut(s)	46, 225, 409, 415, 550, 554, 819
CaiI	CAGNNNCTG	1 cut(s)	1043
CfoI	GCGC	7 cut(s)	155, 170, 229, 238, 413, 554, 556
Cfr10I	RCCGGY	3 cut(s)	201, 407, 413
Cfr13I	GGNCC	6 cut(s)	525, 755, 768, 774, 1714, 2024
Cfr42I	CCGCGG	1 cut(s)	531
CseI	GACGC	3 cut(s)	126, 270, 1283
CsiI	ACCWGGT	1 cut(s)	1796
Csp6I	GTAC	6 cut(s)	72, 159, 310, 1028, 1213, 1458
CspAI	ACCGGT	1 cut(s)	201
CviQI	GTAC	6 cut(s)	72, 159, 310, 1028, 1213, 1458
DdeI	CTNAG	8 cut(s)	720, 978, 1197, 1846, 1856, 1884, 1959, 2041
DinI	GGCGCC	2 cut(s)	154, 412
DrdI	GACNNNNNNGTC	1 cut(s)	401
DriI	GACNNNNNGTC	2 cut(s)	753, 766
DseDI	GACNNNNNNGTC	1 cut(s)	401
EaeI	YGGCCR	1 cut(s)	1639
Eam1104I	CTCTTC	3 cut(s)	936, 1745, 2051
Eam1105I	GACNNNNNGTC	2 cut(s)	753, 766
EarI	CTCTTC	3 cut(s)	936, 1745, 2051
EciI	GGCGGA	2 cut(s)	407, 1079
Eco130I	CCWWGG	2 cut(s)	882, 1642
Eco24I	GRGCYC	2 cut(s)	46, 1447
Eco47I	GGWCC	4 cut(s)	755, 768, 774, 2024
Eco57I	CTGAAG	6 cut(s)	819, 890, 971, 1407, 1953, 1977
Eco88I	CYCGRG	1 cut(s)	218
EcoNI	CCTNNNNNAGG	2 cut(s)	187, 687
EcoRI	GAATTC	1 cut(s)	379
EcoRII	CCWGG	4 cut(s)	450, 751, 770, 1796
EcoT14I	CCWWGG	2 cut(s)	882, 1642
EcoT38I	GRGCYC	2 cut(s)	46, 1447
EgeI	GGCGCC	2 cut(s)	154, 412
EheI	GGCGCC	2 cut(s)	154, 412
ErhI	CCWWGG	2 cut(s)	882, 1642
FaqI	GGGAC	2 cut(s)	317, 1281
FauI	CCCGC	3 cut(s)	53, 293, 786
FauNDI	CATATG	2 cut(s)	1341, 1528
FbaI	TGATCA	3 cut(s)	106, 1167, 1765
FblI	GTMKAC	1 cut(s)	1091
FokI	GGATG	9 cut(s)	302, 713, 899, 983, 1109, 1154, 1631, 1855, 2002
FriOI	GRGCYC	2 cut(s)	46, 1447
FspBI	CTAG	1 cut(s)	1104
GlaI	GCGC	7 cut(s)	154, 169, 228, 237, 412, 553, 555
GsuI	CTGGAG	5 cut(s)	458, 491, 735, 1143, 1929
HaeII	RGCGCY	2 cut(s)	156, 414
HaeIII	GGCC	7 cut(s)	527, 1138, 1239, 1428, 1641, 1716, 2075
HgaI	GACGC	3 cut(s)	126, 270, 1283
HhaI	GCGC	7 cut(s)	155, 170, 229, 238, 413, 554, 556
Hin1I	GRCGYC	5 cut(s)	137, 153, 281, 402, 411
Hin6I	GCGC	7 cut(s)	153, 168, 227, 236, 411, 552, 554
HinP1I	GCGC	7 cut(s)	153, 168, 227, 236, 411, 552, 554
HphI	GGTGA	7 cut(s)	11, 608, 1394, 1532, 1619, 1670, 1775
Hpy166II	GTNNAC	5 cut(s)	984, 1092, 1161, 1298, 1458
Hpy8I	GTNNAC	5 cut(s)	984, 1092, 1161, 1298, 1458
Hpy99I	CGWCG	5 cut(s)	142, 404, 407, 521, 1897
HpyCH4III	ACNGT	3 cut(s)	76, 1692, 2024
HpyCH4IV	ACGT	3 cut(s)	402, 1151, 1270
HpyCH4V	TGCA	9 cut(s)	511, 697, 817, 943, 1034, 1155, 1226, 1339, 1355
HpyF3I	CTNAG	8 cut(s)	720, 978, 1197, 1846, 1856, 1884, 1959, 2041
HpySE526I	ACGT	3 cut(s)	402, 1151, 1270
Hsp92I	GRCGYC	5 cut(s)	137, 153, 281, 402, 411
HspAI	GCGC	7 cut(s)	153, 168, 227, 236, 411, 552, 554
KasI	GGCGCC	2 cut(s)	152, 410
KroI	GCCGGC	2 cut(s)	407, 413
KroNI	GCCGGC	2 cut(s)	409, 415
Ksp22I	TGATCA	3 cut(s)	106, 1167, 1765
KspI	CCGCGG	1 cut(s)	531
LguI	GCTCTTC	1 cut(s)	1745
LmnI	GCTCC	8 cut(s)	41, 391, 439, 668, 685, 1100, 1246, 1408
Lsp1109I	GCAGC	7 cut(s)	833, 1030, 1046, 1210, 1565, 1767, 1770
LweI	GCATC	5 cut(s)	1408, 1866, 1890, 1905, 1929
MabI	ACCWGGT	1 cut(s)	1796
MaeI	CTAG	1 cut(s)	1104
MaeII	ACGT	3 cut(s)	402, 1151, 1270
MaeIII	GTNAC	4 cut(s)	1147, 1192, 1271, 1607
MbiI	CCGCTC	1 cut(s)	570
MfeI	CAATTG	2 cut(s)	672, 1461
MhlI	GDGCHC	4 cut(s)	46, 209, 1054, 1447
MlsI	TGGCCA	1 cut(s)	1641
MluCI	AATT	8 cut(s)	379, 672, 807, 897, 924, 1324, 1461, 1998
MluNI	TGGCCA	1 cut(s)	1641
Mly113I	GGCGCC	2 cut(s)	153, 411
MlyI	GAGTC	6 cut(s)	10, 299, 593, 742, 989, 1082
MmeI	TCCRAC	3 cut(s)	58, 1875, 2043
Mox20I	TGGCCA	1 cut(s)	1641
MreI	CGCCGGCG	2 cut(s)	407, 413
MroNI	GCCGGC	2 cut(s)	407, 413
MscI	TGGCCA	1 cut(s)	1641
MslI	CAYNNNNRTG	3 cut(s)	131, 1416, 1743
Msp20I	TGGCCA	1 cut(s)	1641
MspA1I	CMGCKG	2 cut(s)	530, 1761
MspR9I	CCNGG	5 cut(s)	452, 603, 753, 772, 1798
MunI	CAATTG	2 cut(s)	672, 1461
Mva1269I	GAATGC	2 cut(s)	513, 699
MvaI	CCWGG	4 cut(s)	452, 753, 772, 1798
MvnI	CGCG	7 cut(s)	168, 229, 236, 530, 542, 552, 554
NaeI	GCCGGC	2 cut(s)	409, 415
NarI	GGCGCC	2 cut(s)	153, 411
NciI	CCSGG	1 cut(s)	603
NcoI	CCATGG	1 cut(s)	1642
NdeI	CATATG	2 cut(s)	1341, 1528
NgoMIV	GCCGGC	2 cut(s)	407, 413
NlaIV	GGNNCC	8 cut(s)	43, 154, 206, 412, 477, 592, 681, 776
NmeAIII	GCCGAG	2 cut(s)	129, 807
NmuCI	GTSAC	3 cut(s)	1147, 1271, 1607
NspI	RCATGY	2 cut(s)	1034, 2014
PaeR7I	CTCGAG	1 cut(s)	218
PaqCI	CACCTGC	1 cut(s)	1146
PauI	GCGCGC	1 cut(s)	552
PciI	ACATGT	1 cut(s)	2010
PciSI	GCTCTTC	1 cut(s)	1745
PcsI	WCGNNNNNNNCGW	1 cut(s)	502
PctI	GAATGC	2 cut(s)	513, 699
PdiI	GCCGGC	2 cut(s)	409, 415
PfeI	GAWTC	6 cut(s)	433, 466, 499, 1118, 1735, 1809
PflFI	GACNNNGTC	1 cut(s)	1891
PfoI	TCCNGGA	1 cut(s)	770
PinAI	ACCGGT	1 cut(s)	201
Ple19I	CGATCG	1 cut(s)	540
PleI	GAGTC	6 cut(s)	10, 299, 592, 742, 988, 1081
PluTI	GGCGCC	2 cut(s)	156, 414
PpsI	GAGTC	6 cut(s)	10, 299, 592, 742, 988, 1081
PscI	ACATGT	1 cut(s)	2010
Psp6I	CCWGG	4 cut(s)	450, 751, 770, 1796
PspGI	CCWGG	4 cut(s)	450, 751, 770, 1796
PspN4I	GGNNCC	8 cut(s)	43, 154, 206, 412, 477, 592, 681, 776
PspPI	GGNCC	6 cut(s)	525, 755, 768, 774, 1714, 2024
PsrI	GAACNNNNNNTAC	2 cut(s)	778, 810
PstI	CTGCAG	2 cut(s)	1228, 1357
PstNI	CAGNNNCTG	1 cut(s)	1043
PsyI	GACNNNGTC	1 cut(s)	1891
PteI	GCGCGC	1 cut(s)	552
PvuI	CGATCG	1 cut(s)	540
RgaI	GCGATCGC	1 cut(s)	540
RsaI	GTAC	6 cut(s)	73, 160, 311, 1029, 1214, 1459
RsaNI	GTAC	6 cut(s)	72, 159, 310, 1028, 1213, 1458
RseI	CAYNNNNRTG	3 cut(s)	131, 1416, 1743
SacII	CCGCGG	1 cut(s)	531
SapI	GCTCTTC	1 cut(s)	1745
Sau96I	GGNCC	6 cut(s)	525, 755, 768, 774, 1714, 2024
ScaI	AGTACT	1 cut(s)	1214
SchI	GAGTC	6 cut(s)	10, 299, 593, 742, 989, 1082
ScrFI	CCNGG	5 cut(s)	452, 603, 753, 772, 1798
SduI	GDGCHC	4 cut(s)	46, 209, 1054, 1447
SexAI	ACCWGGT	1 cut(s)	1796
SfaAI	GCGATCGC	1 cut(s)	540
SfaNI	GCATC	5 cut(s)	1408, 1866, 1890, 1905, 1929
SfcI	CTRYAG	2 cut(s)	1224, 1353
SfoI	GGCGCC	2 cut(s)	154, 412
Sfr274I	CTCGAG	1 cut(s)	218
Sfr303I	CCGCGG	1 cut(s)	531
SgfI	GCGATCGC	1 cut(s)	540
SgrAI	CRCCGGYG	3 cut(s)	201, 407, 413
SgrBI	CCGCGG	1 cut(s)	531
SinI	GGWCC	4 cut(s)	755, 768, 774, 2024
SlaI	CTCGAG	1 cut(s)	218
SmiMI	CAYNNNNRTG	3 cut(s)	131, 1416, 1743
SmlI	CTYRAG	2 cut(s)	218, 850
SmoI	CTYRAG	2 cut(s)	218, 850
Sse9I	AATT	8 cut(s)	379, 672, 807, 897, 924, 1324, 1461, 1998
SspDI	GGCGCC	2 cut(s)	152, 410
SspMI	CTAG	1 cut(s)	1104
StyD4I	CCNGG	5 cut(s)	450, 601, 751, 770, 1796
StyI	CCWWGG	2 cut(s)	882, 1642
TaaI	ACNGT	3 cut(s)	76, 1692, 2024
TaiI	ACGT	3 cut(s)	405, 1154, 1273
TaqI	TCGA	4 cut(s)	6, 219, 459, 519
TasI	AATT	8 cut(s)	379, 672, 807, 897, 924, 1324, 1461, 1998
TatI	WGTACW	4 cut(s)	158, 1027, 1212, 1457
TauI	GCSGC	9 cut(s)	281, 297, 300, 530, 533, 536, 545, 548, 573
TfiI	GAWTC	6 cut(s)	433, 466, 499, 1118, 1735, 1809
TscAI	CASTG	7 cut(s)	109, 867, 954, 1186, 1564, 1775, 1838
TseFI	GTSAC	3 cut(s)	1147, 1271, 1607
TseI	GCWGC	7 cut(s)	821, 1034, 1043, 1223, 1578, 1755, 1758
Tsp45I	GTSAC	3 cut(s)	1147, 1271, 1607
TspGWI	ACGGA	2 cut(s)	1109, 1296
TspRI	CASTG	7 cut(s)	109, 867, 954, 1186, 1564, 1775, 1838
Tth111I	GACNNNGTC	1 cut(s)	1891
VpaK11BI	GGWCC	4 cut(s)	755, 768, 774, 2024
XagI	CCTNNNNNAGG	2 cut(s)	187, 687
XapI	RAATTY	3 cut(s)	379, 924, 1998
XceI	RCATGY	2 cut(s)	1034, 2014
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1247, 2026
XhoI	CTCGAG	1 cut(s)	218
XmiI	GTMKAC	1 cut(s)	1091
XspI	CTAG	1 cut(s)	1104
ZraI	GACGTC	1 cut(s)	403
ZrmI	AGTACT	1 cut(s)	1214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.