RchiOBHm_Chr4g0403861

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
23342898 .. 23343553
656 bp
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UTR
Exon/CDS
Intron
PRQ37553

Sequence Viewer

Length: 363 bp
ATGCCTTCAGTCCCTGCTAAGATACTCATAGGCATCTCTTCAGACCCAGATGAAAGCAAACAGTTGCTATCACGAGCAATTAGTGTTCTGGCTCATCCGAATGACAACATTGTTGCCATTCATGTTCTTGGTCAGTCGAAGCGCGAATCAGTAACAAAGTCTCAATCCCAACTTCGTAGAGCAAAAGCCTATGTTATATCTGTGCTTGGAGAATTTGCCAGGACTTGCCAATCCAAGCAGGTAAACCTGGAGGCAAAAGTAATTTTCTGCTCTAGTATTGGAAGAGGTCTAGTTGAGGAAGCAAAATCTATTTTCGCAGATTATCTTCTTCTTTGTAGCTCAAGAAACCAATCAAACAGGTAA

Protein Analysis

120

Amino Acids

13.11

Weight (kDa)

9.55

Isoelectric Point (pI)

61.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 229
AccII CGCG 1 cut(s) 144
AcsI RAATTY 1 cut(s) 212
AcuI CTGAAG 1 cut(s) 24
AjnI CCWGG 2 cut(s) 218, 246
AluBI AGCT 1 cut(s) 339
AluI AGCT 1 cut(s) 339
Alw26I GTCTC 1 cut(s) 165
AlwNI CAGNNNCTG 1 cut(s) 14
ApoI RAATTY 1 cut(s) 212
AspLEI GCGC 1 cut(s) 144
BauI CACGAG 1 cut(s) 72
BciT130I CCWGG 2 cut(s) 220, 248
BcoDI GTCTC 1 cut(s) 165
BfaI CTAG 2 cut(s) 273, 290
BfuAI ACCTGC 1 cut(s) 229
Bme1390I CCNGG 2 cut(s) 220, 248
BmrFI CCNGG 2 cut(s) 220, 248
BmsI GCATC 1 cut(s) 42
BpmI CTGGAG 1 cut(s) 269
BpuEI CTTGAG 1 cut(s) 325
BseBI CCWGG 2 cut(s) 220, 248
BseGI GGATG 1 cut(s) 94
Bsh1236I CGCG 1 cut(s) 144
BsmAI GTCTC 1 cut(s) 165
BspFNI CGCG 1 cut(s) 144
BspMI ACCTGC 1 cut(s) 229
BssSI CACGAG 1 cut(s) 72
Bst2BI CACGAG 1 cut(s) 72
Bst2UI CCWGG 2 cut(s) 220, 248
Bst4CI ACNGT 1 cut(s) 63
Bst6I CTCTTC 2 cut(s) 43, 277
BstDEI CTNAG 1 cut(s) 18
BstF5I GGATG 1 cut(s) 94
BstFNI CGCG 1 cut(s) 144
BstHHI GCGC 1 cut(s) 144
BstMAI GTCTC 1 cut(s) 165
BstNI CCWGG 2 cut(s) 220, 248
BstSCI CCNGG 2 cut(s) 218, 246
BstUI CGCG 1 cut(s) 144
BtsCI GGATG 1 cut(s) 94
BveI ACCTGC 1 cut(s) 229
CaiI CAGNNNCTG 1 cut(s) 14
CfoI GCGC 1 cut(s) 144
CviAII CATG 1 cut(s) 122
CviJI RGCY 3 cut(s) 92, 188, 339
CviKI_1 RGCY 3 cut(s) 92, 188, 339
DdeI CTNAG 1 cut(s) 18
Eam1104I CTCTTC 2 cut(s) 43, 277
EarI CTCTTC 2 cut(s) 43, 277
Eco57I CTGAAG 1 cut(s) 24
EcoRII CCWGG 2 cut(s) 218, 246
FaeI CATG 1 cut(s) 125
FaiI YATR 4 cut(s) 29, 123, 192, 197
FatI CATG 1 cut(s) 121
FokI GGATG 1 cut(s) 81
FspBI CTAG 2 cut(s) 273, 290
GlaI GCGC 1 cut(s) 143
GsuI CTGGAG 1 cut(s) 269
HhaI GCGC 1 cut(s) 144
Hin1II CATG 1 cut(s) 125
Hin6I GCGC 1 cut(s) 142
HinP1I GCGC 1 cut(s) 142
HinfI GANTC 1 cut(s) 146
Hpy166II GTNNAC 1 cut(s) 244
Hpy188I TCNGA 2 cut(s) 43, 99
Hpy188III TCNNGA 2 cut(s) 72, 342
Hpy8I GTNNAC 1 cut(s) 244
HpyAV CCTTC 1 cut(s) 15
HpyCH4III ACNGT 1 cut(s) 63
HpyF3I CTNAG 1 cut(s) 18
Hsp92II CATG 1 cut(s) 125
HspAI GCGC 1 cut(s) 142
LpnPI CCDG 9 cut(s) 27, 60, 74, 205, 224, 232, 233, 260, 343
LweI GCATC 1 cut(s) 42
MaeI CTAG 2 cut(s) 273, 290
MaeIII GTNAC 1 cut(s) 151
MboII GAAGA 4 cut(s) 30, 294, 317, 320
MluCI AATT 3 cut(s) 78, 212, 261
MnlI CCTC 3 cut(s) 244, 278, 289
MslI CAYNNNNRTG 1 cut(s) 99
MspR9I CCNGG 2 cut(s) 220, 248
MvaI CCWGG 2 cut(s) 220, 248
MvnI CGCG 1 cut(s) 144
NlaIII CATG 1 cut(s) 125
PfeI GAWTC 1 cut(s) 146
Psp6I CCWGG 2 cut(s) 218, 246
PspGI CCWGG 2 cut(s) 218, 246
PstNI CAGNNNCTG 1 cut(s) 14
RseI CAYNNNNRTG 1 cut(s) 99
ScrFI CCNGG 2 cut(s) 220, 248
SetI ASST 5 cut(s) 243, 249, 289, 341, 362
SfaNI GCATC 1 cut(s) 42
SmiMI CAYNNNNRTG 1 cut(s) 99
SmlI CTYRAG 1 cut(s) 340
SmoI CTYRAG 1 cut(s) 340
Sse9I AATT 3 cut(s) 78, 212, 261
SspMI CTAG 2 cut(s) 273, 290
StyD4I CCNGG 2 cut(s) 218, 246
TaaI ACNGT 1 cut(s) 63
TaqI TCGA 1 cut(s) 137
TasI AATT 3 cut(s) 78, 212, 261
TfiI GAWTC 1 cut(s) 146
TspDTI ATGAA 2 cut(s) 66, 110
XapI RAATTY 1 cut(s) 212
XspI CTAG 2 cut(s) 273, 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.