Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0007925

Physical Location & Seq

Genomic Coordinates Forward (+)

43398784 .. 43403990

Gene Structure 5207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000008945

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGCCAGCACTCTACCTCAGTCGCACCACCATTCTCAAGCCAGTCACAACCGCAGCCCACCTACCCTCATCGAAGCCACCGCAGCGCAAGGAACTCGATCTCGTAATCGAGGCCGCTGTTCAAAACGCCCAGCCGGTGACCCACCACCACTGCGACCCAAAACCACCACCTCACGATCTCAGAAACCAGCGCCAACCAAAACCAGAGCGATGCCAATCCACCCAAGTCAGAGCGATGTCCATCCAGACGCATCACCACTGCTTCCTCCGCCATCTGAGCAAAATCTAGCGCCCAAAAATGAACCTCTAGACAGTTCGGCAAACACAATGCCTTCAGTCCCTGCTAAGATACTCATAGGCATCTCTTCAGACCCAGATGAAAGCAAACAGTTGCTATCACGAGCAATTAGTGTTCTGGCTCATCCGAATGACAACATTGTTGCCATTCATGTTCTTGTTGGCGAGGAGAGGAAGAAGCGCGAATCAGTAACAAAGTCTCAATCCCAACTTCGCAGAGCAAAAGCCTATGTTATATCTGTGCTTGGAGAATTTGCCAGGACTTGCCAATCCAAGCAGGTAAACCTGGAGGCAAAAGTAATTTTCTGCTCTAGTATTGGAAGAGGTCTAGTTGAGGAAGCAAAATCTATTTACGCAGATTATCTTCTTCTTTGTAGCTCAAGAAACCAATCAAACAGAGTTCCATCCATTACAAGATACTGCCTAAAACATGCCCCGTCTGGTTGCACATTGGTTTTATTGGGGAAACCTACCAACCCTCAACAAAAGTCAGATTCACATTCTGCAGACTCGAAAGAAAGCCATCAATCAATTCCATGGCGGACTAAAAATACCATTCCGAGTGGCAGAAGTACATCCTCTTCTGAAAATCTAGGTGTCAAAGAAACGAAGAAAGAAATCACTTCACCAAGGGCTGTTTTAGATGAATTTGAAGTAGAATCTCAGAGCACAGATGACACTGGCAGCTATGGGGACTCGGCTATCATACAGTCCCCCTCTCTGGCTGCCAAGATCATGAGCCAAACCAACACAAAGAAGCAAGGATTATCACCACGCAGATTCATCACTTCTTTCTTTGGTTCACCATTCAGAAAAAGAAATGACAGTTTATCAAACAACGAAAAGCGATTACCTTCACTGAAGTGCTTCAGCTACAAGGAGATCATGAATTCTACAAACAGCTTCCACCCAGATAATCTGGTAGGTCGAGGTGGGTATTCTGAAGTATATAGGGGTAATCTTTCTGATGGGCAAACCATTGCTGTCAAAATGTTGGCCAAGGACAACAACAATGCTAACAAGGAAAAAGAGTTCCTAATGGAACTGGGAGTAATTTTACATGTCAGCCATCCTAATACAGCCAAATTAGTTGGTTGCTGCATTGAAAATGGACTTTACCTCATTTTCAACTTCACTGAAAACGGAACTTTGGCATCTGCATTGCATGGTAAATCATGTGAATCACTTCCGTGGCCTGTTAGATACAAAATTGTCATTGGAGTTGCAAAGGGTCTGCATTATCTGCATAAATGTTGTAAGCACCGGATAATACATCGTGACATAAAAGCCTCAAATGTCCTTCTTGGACCAGATTATGAACCACAGATTACAGATTTTGGACTAGCAAAATGGCTTCCTAACAAATGGACTCACCACGCTGTGATTCCGATAGAGGGTACATTTGGATACTTAGCACCAGAGTACTTCATGCACGGAATTGTGGATGAAAAAACAGATGTTTTTGCATTTGGGGTTCTTCTTTTGGAGATAGTAACTGGCCGAAAGCCTGTTGATTCATCTACAAAAAACCTTCTACTTTGGGCAATGCCACACATGGAATCAGGGGACATAGCTAAACTAGCTGATCCAAAACTGGAAGCAAATTATGATGCAGAACAACTGCAGAGAGTAGTCCTTGCTGCCTCATATTGTGTGAGACAAACGTCGGTATGGCGTCCATCGATGAGTGAGGTGTTAGAGCTTCTAAACAAAGGCCATAAGTCTGAGATTGCAAGGACCTTGATTCCGAAGTTTTCCTCAGATGAGTTGGATGATTACTCCATGGTTTTTGGTTATGATATTCCAGAAGACATTGATTTGGAGGACTATTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Usp

Protein Analysis

711

Amino Acids

78.52

Weight (kDa)

8.91

Isoelectric Point (pI)

54.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Usp	PF00582	116 - 250	6.4e-06	Universal stress protein family
Pkinase	PF00069	402 - 665	7e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	405 - 667	4.4e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57670
fragaria_vesca	FvH4_4g08510 FvH4_4g08510 FvH4_4g08510 FvH4_4g08510
malus_domestica	MD13G1263500.v1.1 MD16G1264900.v1.1
prunus_persica	Prupe.1G094200_v2.0.a1 Prupe.1G094200_v2.0.a1 Prupe.1G094200_v2.0.a1 Prupe.1G094200_v2.0.a1
pyrus_communis	pycom16g23440
rosa_chinensis	RchiOBHm_Chr4g0403851 RchiOBHm_Chr4g0403861
rosa_laevigata	RLG00000008945
rosa_multiflora	Rmu_sc0005134.1_g000014
rosa_roxburghii	Rroxscaffold_5G00348470
rosa_rugosa	Rorug04G0046100 Rorug04G0046100
rosa_samantha	Rh4AG121300 Rh4BG114600 Rh4CG129900 Rh4DG114600
rosa_wichuraiana	Rw4G009890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	565
AccII	CGCG	1 cut(s)	480
AciI	CCGC	5 cut(s)	52, 81, 115, 269, 838
AclWI	GGATC	1 cut(s)	1877
AcoI	YGGCCR	3 cut(s)	3, 1293, 1795
AcsI	RAATTY	3 cut(s)	548, 944, 1186
AcuI	CTGAAG	5 cut(s)	318, 351, 1150, 1178, 1260
AcyI	GRCGYC	1 cut(s)	1972
AdeI	CACNNNGTG	1 cut(s)	1678
AfaI	GTAC	3 cut(s)	871, 1696, 1721
AfiI	CCNNNNNNNGG	2 cut(s)	1018, 1691
AflIII	ACRYGT	1 cut(s)	1357
AgsI	TTSAA	4 cut(s)	123, 950, 1403, 1426
AjnI	CCWGG	2 cut(s)	554, 582
AleI	CACNNNNGTG	2 cut(s)	1159, 1486
AloI	GAACNNNNNNTCC	2 cut(s)	1313, 1345
AluBI	AGCT	7 cut(s)	675, 984, 1170, 1200, 1871, 1880, 1999
AluI	AGCT	7 cut(s)	675, 984, 1170, 1200, 1871, 1880, 1999
Alw21I	GWGCWC	1 cut(s)	968
Alw26I	GTCTC	2 cut(s)	501, 1948
AlwI	GGATC	1 cut(s)	1877
AlwNI	CAGNNNCTG	1 cut(s)	341
AoxI	GGCC	6 cut(s)	3, 112, 1293, 1490, 1795, 2011
ApeKI	GCWGC	6 cut(s)	54, 83, 981, 1022, 1395, 1937
ApoI	RAATTY	3 cut(s)	548, 944, 1186
Asp700I	GAANNNNTTC	2 cut(s)	1163, 1482
AspLEI	GCGC	4 cut(s)	88, 193, 292, 480
AspS9I	GGNCC	2 cut(s)	1604, 2034
AsuHPI	GGTGA	6 cut(s)	149, 246, 915, 1059, 1092, 1661
AvaII	GGWCC	2 cut(s)	1604, 2034
BalI	TGGCCA	2 cut(s)	5, 1295
BarI	GAAGNNNNNNTAC	2 cut(s)	862, 894
BauI	CACGAG	1 cut(s)	399
BbsI	GAAGAC	1 cut(s)	2112
Bbv12I	GWGCWC	1 cut(s)	968
BbvI	GCAGC	6 cut(s)	66, 95, 993, 1009, 1382, 1924
BccI	CCATC	7 cut(s)	249, 280, 709, 828, 1259, 1374, 1984
BcgI	CGANNNNNNTGC	2 cut(s)	77, 111
BciT130I	CCWGG	2 cut(s)	556, 584
BciVI	GTATCC	1 cut(s)	1697
BcoDI	GTCTC	2 cut(s)	501, 1948
BfaI	CTAG	7 cut(s)	287, 308, 609, 626, 890, 1640, 1877
BfmI	CTRYAG	2 cut(s)	801, 1919
BfoI	RGCGCY	2 cut(s)	194, 293
BfuAI	ACCTGC	1 cut(s)	565
BfuI	GTATCC	1 cut(s)	1697
BisI	GCNGC	7 cut(s)	55, 84, 115, 982, 1023, 1396, 1938
BlsI	GCNGC	7 cut(s)	56, 85, 116, 983, 1024, 1397, 1939
BmcAI	AGTACT	1 cut(s)	1721
Bme1390I	CCNGG	2 cut(s)	556, 584
Bme18I	GGWCC	2 cut(s)	1604, 2034
BmgT120I	GGNCC	2 cut(s)	1604, 2034
BmrFI	CCNGG	2 cut(s)	556, 584
BmrI	ACTGGG	1 cut(s)	1352
BmsI	GCATC	5 cut(s)	201, 260, 369, 1460, 1897
BmuI	ACTGGG	1 cut(s)	1352
BoxI	GACNNNNGTC	1 cut(s)	1960
BpiI	GAAGAC	1 cut(s)	2112
BpmI	CTGGAG	1 cut(s)	605
BpuEI	CTTGAG	2 cut(s)	21, 661
Bsa29I	ATCGAT	1 cut(s)	1979
BsaBI	GATNNNNATC	2 cut(s)	215, 240
BsaHI	GRCGYC	1 cut(s)	1972
BsaJI	CCNNGG	5 cut(s)	833, 926, 1296, 1487, 2079
BsaWI	WCCGGW	1 cut(s)	1560
Bsc4I	CCNNNNNNNGG	2 cut(s)	1018, 1691
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	5 cut(s)	42, 982, 1347, 1798, 1896
Bse3DI	GCAATG	3 cut(s)	1275, 1457, 1848
Bse8I	GATNNNNATC	2 cut(s)	215, 240
BseBI	CCWGG	2 cut(s)	556, 584
BseCI	ATCGAT	1 cut(s)	1979
BseDI	CCNNGG	5 cut(s)	833, 926, 1296, 1487, 2079
BseGI	GGATG	7 cut(s)	241, 421, 701, 872, 1366, 1747, 2074
BseJI	GATNNNNATC	2 cut(s)	215, 240
BseLI	CCNNNNNNNGG	2 cut(s)	1018, 1691
BseMI	GCAATG	3 cut(s)	1275, 1457, 1848
BseMII	CTCAG	6 cut(s)	32, 194, 267, 974, 2013, 2070
BseNI	ACTGG	5 cut(s)	42, 982, 1347, 1798, 1896
BseRI	GAGGAG	1 cut(s)	479
BseXI	GCAGC	6 cut(s)	66, 95, 993, 1009, 1382, 1924
BseYI	CCCAGC	1 cut(s)	130
Bsh1236I	CGCG	1 cut(s)	480
BshFI	GGCC	6 cut(s)	5, 114, 1295, 1492, 1797, 2013
BshVI	ATCGAT	1 cut(s)	1979
BsiHKAI	GWGCWC	1 cut(s)	968
BsiSI	CCGG	2 cut(s)	135, 1561
BslFI	GGGAC	4 cut(s)	323, 994, 1004, 1877
BslI	CCNNNNNNNGG	2 cut(s)	1018, 1691
BsmAI	GTCTC	2 cut(s)	501, 1948
BsmFI	GGGAC	4 cut(s)	323, 994, 1004, 1877
BsnI	GGCC	6 cut(s)	5, 114, 1295, 1492, 1797, 2013
Bsp1286I	GDGCHC	1 cut(s)	968
Bsp143I	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
Bsp19I	CCATGG	2 cut(s)	833, 2079
BspACI	CCGC	5 cut(s)	52, 81, 115, 269, 838
BspANI	GGCC	6 cut(s)	5, 114, 1295, 1492, 1797, 2013
BspCNI	CTCAG	6 cut(s)	31, 193, 268, 973, 2014, 2069
BspDI	ATCGAT	1 cut(s)	1979
BspFNI	CGCG	1 cut(s)	480
BspHI	TCATGA	2 cut(s)	1032, 1182
BspMAI	CTGCAG	2 cut(s)	805, 1923
BspMI	ACCTGC	1 cut(s)	565
BspPI	GGATC	1 cut(s)	1877
BsrDI	GCAATG	3 cut(s)	1275, 1457, 1848
BsrFI	RCCGGY	1 cut(s)	134
BsrI	ACTGG	5 cut(s)	42, 982, 1347, 1798, 1896
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	5 cut(s)	833, 926, 1296, 1487, 2079
BssMI	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
BssNI	GRCGYC	1 cut(s)	1972
BssSI	CACGAG	1 cut(s)	399
BssT1I	CCWWGG	4 cut(s)	833, 926, 1296, 2079
Bst2BI	CACGAG	1 cut(s)	399
Bst2UI	CCWGG	2 cut(s)	556, 584
Bst4CI	ACNGT	4 cut(s)	314, 390, 1008, 1124
Bst6I	CTCTTC	3 cut(s)	370, 613, 883
BstACI	GRCGYC	1 cut(s)	1972
BstAPI	GCANNNNNTGC	1 cut(s)	1540
BstC8I	GCNNGC	1 cut(s)	7
BstDEI	CTNAG	8 cut(s)	18, 180, 276, 345, 960, 1708, 2022, 2056
BstDSI	CCRYGG	3 cut(s)	833, 1487, 2079
BstEII	GGTNACC	1 cut(s)	137
BstF5I	GGATG	7 cut(s)	241, 421, 701, 872, 1366, 1747, 2074
BstFNI	CGCG	1 cut(s)	480
BstH2I	RGCGCY	2 cut(s)	194, 293
BstHHI	GCGC	4 cut(s)	88, 193, 292, 480
BstKTI	GATC	5 cut(s)	101, 179, 1032, 1182, 1885
BstMAI	GTCTC	2 cut(s)	501, 1948
BstMBI	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 268, 277, 1540, 1877
BstNI	CCWGG	2 cut(s)	556, 584
BstNSI	RCATGY	2 cut(s)	731, 1361
BstPAI	GACNNNNGTC	1 cut(s)	1960
BstPI	GGTNACC	1 cut(s)	137
BstSCI	CCNGG	2 cut(s)	554, 582
BstSFI	CTRYAG	2 cut(s)	801, 1919
BstUI	CGCG	1 cut(s)	480
BstV1I	GCAGC	6 cut(s)	66, 95, 993, 1009, 1382, 1924
BstV2I	GAAGAC	1 cut(s)	2112
Bsu15I	ATCGAT	1 cut(s)	1979
BsuI	GTATCC	1 cut(s)	1697
BsuRI	GGCC	6 cut(s)	5, 114, 1295, 1492, 1797, 2013
BsuTUI	ATCGAT	1 cut(s)	1979
BtgI	CCRYGG	3 cut(s)	833, 1487, 2079
BtgZI	GCGATG	2 cut(s)	224, 249
BtsCI	GGATG	7 cut(s)	241, 421, 701, 872, 1366, 1747, 2074
BtsI	GCAGTG	2 cut(s)	149, 257
BtsIMutI	CAGTG	5 cut(s)	149, 257, 975, 1154, 1431
BveI	ACCTGC	1 cut(s)	565
Cac8I	GCNNGC	1 cut(s)	7
CaiI	CAGNNNCTG	1 cut(s)	341
CciI	TCATGA	2 cut(s)	1032, 1182
CfoI	GCGC	4 cut(s)	88, 193, 292, 480
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	2 cut(s)	1604, 2034
ClaI	ATCGAT	1 cut(s)	1979
CseI	GACGC	2 cut(s)	257, 1961
Csp6I	GTAC	3 cut(s)	870, 1695, 1720
CviQI	GTAC	3 cut(s)	870, 1695, 1720
DdeI	CTNAG	8 cut(s)	18, 180, 276, 345, 960, 1708, 2022, 2056
DpnI	GATC	5 cut(s)	100, 178, 1031, 1181, 1884
DpnII	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
DraIII	CACNNNGTG	1 cut(s)	1678
EaeI	YGGCCR	3 cut(s)	3, 1293, 1795
Eam1104I	CTCTTC	3 cut(s)	370, 613, 883
EarI	CTCTTC	3 cut(s)	370, 613, 883
EciI	GGCGGA	2 cut(s)	258, 853
Eco130I	CCWWGG	4 cut(s)	833, 926, 1296, 2079
Eco47I	GGWCC	2 cut(s)	1604, 2034
Eco57I	CTGAAG	5 cut(s)	318, 351, 1150, 1178, 1260
Eco91I	GGTNACC	1 cut(s)	137
EcoO109I	RGGNCCY	1 cut(s)	2034
EcoO65I	GGTNACC	1 cut(s)	137
EcoRI	GAATTC	1 cut(s)	1186
EcoRII	CCWGG	2 cut(s)	554, 582
EcoT14I	CCWWGG	4 cut(s)	833, 926, 1296, 2079
ErhI	CCWWGG	4 cut(s)	833, 926, 1296, 2079
FaqI	GGGAC	4 cut(s)	323, 994, 1004, 1877
Fnu4HI	GCNGC	7 cut(s)	55, 84, 115, 982, 1023, 1396, 1938
FokI	GGATG	7 cut(s)	228, 408, 688, 859, 1353, 1754, 2081
Fsp4HI	GCNGC	7 cut(s)	55, 84, 115, 982, 1023, 1396, 1938
FspBI	CTAG	7 cut(s)	287, 308, 609, 626, 890, 1640, 1877
GlaI	GCGC	4 cut(s)	87, 192, 291, 479
GluI	GCNGC	7 cut(s)	55, 84, 115, 982, 1023, 1396, 1938
GsaI	CCCAGC	1 cut(s)	134
GsuI	CTGGAG	1 cut(s)	605
HaeII	RGCGCY	2 cut(s)	194, 293
HaeIII	GGCC	6 cut(s)	5, 114, 1295, 1492, 1797, 2013
HapII	CCGG	2 cut(s)	135, 1561
HgaI	GACGC	2 cut(s)	257, 1961
HhaI	GCGC	4 cut(s)	88, 193, 292, 480
Hin1I	GRCGYC	1 cut(s)	1972
Hin6I	GCGC	4 cut(s)	86, 191, 290, 478
HinP1I	GCGC	4 cut(s)	86, 191, 290, 478
HpaII	CCGG	2 cut(s)	135, 1561
HphI	GGTGA	6 cut(s)	149, 246, 915, 1059, 1092, 1661
Hpy166II	GTNNAC	2 cut(s)	580, 1100
Hpy188III	TCNNGA	9 cut(s)	174, 245, 308, 399, 678, 1033, 1183, 1574, 2102
Hpy8I	GTNNAC	2 cut(s)	580, 1100
Hpy99I	CGWCG	1 cut(s)	1966
HpyAV	CCTTC	4 cut(s)	342, 1161, 1607, 1838
HpyCH4III	ACNGT	4 cut(s)	314, 390, 1008, 1124
HpyCH4IV	ACGT	1 cut(s)	1961
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 268, 277, 1540, 1877
HpyF3I	CTNAG	8 cut(s)	18, 180, 276, 345, 960, 1708, 2022, 2056
HpySE526I	ACGT	1 cut(s)	1961
Hsp92I	GRCGYC	1 cut(s)	1972
HspAI	GCGC	4 cut(s)	86, 191, 290, 478
Kzo9I	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
Lsp1109I	GCAGC	6 cut(s)	66, 95, 993, 1009, 1382, 1924
LweI	GCATC	5 cut(s)	201, 260, 369, 1460, 1897
MaeI	CTAG	7 cut(s)	287, 308, 609, 626, 890, 1640, 1877
MaeII	ACGT	1 cut(s)	1961
MaeIII	GTNAC	5 cut(s)	44, 137, 487, 1574, 1789
MalI	GATC	5 cut(s)	100, 178, 1031, 1181, 1884
MboI	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
MboII	GAAGA	9 cut(s)	357, 484, 630, 653, 656, 870, 919, 1766, 2117
MhlI	GDGCHC	1 cut(s)	968
MlsI	TGGCCA	2 cut(s)	5, 1295
MluNI	TGGCCA	2 cut(s)	5, 1295
MlyI	GAGTC	3 cut(s)	800, 986, 1660
MmeI	TCCRAC	1 cut(s)	2046
Mox20I	TGGCCA	2 cut(s)	5, 1295
MroXI	GAANNNNTTC	2 cut(s)	1163, 1482
MscI	TGGCCA	2 cut(s)	5, 1295
MslI	CAYNNNNRTG	3 cut(s)	426, 1159, 1486
Msp20I	TGGCCA	2 cut(s)	5, 1295
MspA1I	CMGCKG	1 cut(s)	117
MspI	CCGG	2 cut(s)	135, 1561
MspR9I	CCNGG	2 cut(s)	556, 584
MvaI	CCWGG	2 cut(s)	556, 584
MvnI	CGCG	1 cut(s)	480
MwoI	GCNNNNNNNGC	5 cut(s)	83, 268, 277, 1540, 1877
NcoI	CCATGG	2 cut(s)	833, 2079
NdeII	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
NmeAIII	GCCGAG	1 cut(s)	974
NmuCI	GTSAC	3 cut(s)	44, 137, 1574
NspI	RCATGY	2 cut(s)	731, 1361
OliI	CACNNNNGTG	2 cut(s)	1159, 1486
PagI	TCATGA	2 cut(s)	1032, 1182
PciI	ACATGT	1 cut(s)	1357
PdmI	GAANNNNTTC	2 cut(s)	1163, 1482
PfeI	GAWTC	9 cut(s)	482, 791, 956, 1077, 1478, 1681, 1811, 1856, 2041
PkrI	GCNGC	7 cut(s)	56, 85, 116, 983, 1024, 1397, 1939
PleI	GAGTC	3 cut(s)	800, 986, 1660
PpsI	GAGTC	3 cut(s)	800, 986, 1660
PpuMI	RGGWCCY	1 cut(s)	2034
PscI	ACATGT	1 cut(s)	1357
PshAI	GACNNNNGTC	1 cut(s)	1960
Psp5II	RGGWCCY	1 cut(s)	2034
Psp6I	CCWGG	2 cut(s)	554, 582
PspEI	GGTNACC	1 cut(s)	137
PspFI	CCCAGC	1 cut(s)	130
PspGI	CCWGG	2 cut(s)	554, 582
PspPI	GGNCC	2 cut(s)	1604, 2034
PspPPI	RGGWCCY	1 cut(s)	2034
PstI	CTGCAG	2 cut(s)	805, 1923
PstNI	CAGNNNCTG	1 cut(s)	341
RsaI	GTAC	3 cut(s)	871, 1696, 1721
RsaNI	GTAC	3 cut(s)	870, 1695, 1720
RseI	CAYNNNNRTG	3 cut(s)	426, 1159, 1486
SatI	GCNGC	7 cut(s)	55, 84, 115, 982, 1023, 1396, 1938
Sau3AI	GATC	5 cut(s)	98, 176, 1029, 1179, 1882
Sau96I	GGNCC	2 cut(s)	1604, 2034
ScaI	AGTACT	1 cut(s)	1721
SchI	GAGTC	3 cut(s)	800, 986, 1660
ScrFI	CCNGG	2 cut(s)	556, 584
SduI	GDGCHC	1 cut(s)	968
SfaNI	GCATC	5 cut(s)	201, 260, 369, 1460, 1897
SfcI	CTRYAG	2 cut(s)	801, 1919
SinI	GGWCC	2 cut(s)	1604, 2034
SmiMI	CAYNNNNRTG	3 cut(s)	426, 1159, 1486
SmlI	CTYRAG	2 cut(s)	36, 676
SmoI	CTYRAG	2 cut(s)	36, 676
SsiI	CCGC	5 cut(s)	52, 81, 115, 269, 838
SspMI	CTAG	7 cut(s)	287, 308, 609, 626, 890, 1640, 1877
StyD4I	CCNGG	2 cut(s)	554, 582
StyI	CCWWGG	4 cut(s)	833, 926, 1296, 2079
TaaI	ACNGT	4 cut(s)	314, 390, 1008, 1124
TaiI	ACGT	1 cut(s)	1964
TaqI	TCGA	6 cut(s)	72, 97, 109, 809, 1225, 1979
TatI	WGTACW	2 cut(s)	869, 1719
TauI	GCSGC	1 cut(s)	117
TfiI	GAWTC	9 cut(s)	482, 791, 956, 1077, 1478, 1681, 1811, 1856, 2041
TscAI	CASTG	5 cut(s)	156, 264, 982, 1161, 1438
TseFI	GTSAC	3 cut(s)	44, 137, 1574
TseI	GCWGC	6 cut(s)	54, 83, 981, 1022, 1395, 1937
Tsp45I	GTSAC	3 cut(s)	44, 137, 1574
TspGWI	ACGGA	3 cut(s)	1455, 1476, 1746
TspRI	CASTG	5 cut(s)	156, 264, 982, 1161, 1438
VpaK11BI	GGWCC	2 cut(s)	1604, 2034
XapI	RAATTY	3 cut(s)	548, 944, 1186
XbaI	TCTAGA	1 cut(s)	307
XceI	RCATGY	2 cut(s)	731, 1361
XmnI	GAANNNNTTC	2 cut(s)	1163, 1482
XspI	CTAG	7 cut(s)	287, 308, 609, 626, 890, 1640, 1877
ZrmI	AGTACT	1 cut(s)	1721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.