prolyl 4-hydroxylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G43080 |
| fragaria_vesca | FvH4_4g11880 FvH4_4g11880 FvH4_4g11880 |
| malus_domestica | MD04G1030700.v1.1 |
| prunus_persica | Prupe.1G180100_v2.0.a1 Prupe.1G180100_v2.0.a1 |
| pyrus_communis | pycom04g02600 |
| rosa_chinensis | RchiOBHm_Chr4g0409351 |
| rosa_laevigata | RLG00000008567 |
| rosa_multiflora | Rmu_sc0001616.1_g000050 |
| rosa_roxburghii | Rroxscaffold_5G00353870 |
| rosa_rugosa | Rorug04G0093100 |
| rosa_samantha | Rh4AG155700 Rh4BG154200 Rh4DG148700 |
| rosa_wichuraiana | Rw4G012740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 543 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 837 |
| AclWI | GGATC | 2 cut(s) | 121, 770 |
| AcoI | YGGCCR | 1 cut(s) | 766 |
| AcsI | RAATTY | 2 cut(s) | 170, 216 |
| AfaI | GTAC | 2 cut(s) | 397, 486 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 665, 728, 837 |
| AgsI | TTSAA | 5 cut(s) | 132, 341, 458, 512, 583 |
| AleI | CACNNNNGTG | 1 cut(s) | 353 |
| AluBI | AGCT | 7 cut(s) | 128, 255, 320, 402, 684, 812, 854 |
| AluI | AGCT | 7 cut(s) | 128, 255, 320, 402, 684, 812, 854 |
| Alw21I | GWGCWC | 1 cut(s) | 296 |
| Alw26I | GTCTC | 1 cut(s) | 130 |
| AlwI | GGATC | 2 cut(s) | 121, 770 |
| AoxI | GGCC | 1 cut(s) | 766 |
| ApeKI | GCWGC | 2 cut(s) | 5, 8 |
| ApoI | RAATTY | 2 cut(s) | 170, 216 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 434, 507 |
| AspS9I | GGNCC | 2 cut(s) | 195, 532 |
| AsuHPI | GGTGA | 1 cut(s) | 686 |
| AsuNHI | GCTAGC | 1 cut(s) | 808 |
| AvaII | GGWCC | 2 cut(s) | 195, 532 |
| BalI | TGGCCA | 1 cut(s) | 768 |
| Bbv12I | GWGCWC | 1 cut(s) | 296 |
| BccI | CCATC | 2 cut(s) | 152, 758 |
| BciVI | GTATCC | 1 cut(s) | 355 |
| BcoDI | GTCTC | 1 cut(s) | 130 |
| BfaI | CTAG | 1 cut(s) | 809 |
| BfmI | CTRYAG | 1 cut(s) | 351 |
| BfuI | GTATCC | 1 cut(s) | 355 |
| BisI | GCNGC | 2 cut(s) | 6, 9 |
| BlsI | GCNGC | 2 cut(s) | 7, 10 |
| Bme18I | GGWCC | 2 cut(s) | 195, 532 |
| BmgT120I | GGNCC | 2 cut(s) | 195, 532 |
| BmrI | ACTGGG | 1 cut(s) | 149 |
| BmsI | GCATC | 1 cut(s) | 724 |
| BmtI | GCTAGC | 1 cut(s) | 812 |
| BmuI | ACTGGG | 1 cut(s) | 149 |
| BpmI | CTGGAG | 1 cut(s) | 769 |
| Bpu10I | CCTNAGC | 1 cut(s) | 670 |
| BpuEI | CTTGAG | 4 cut(s) | 310, 408, 436, 465 |
| BsaBI | GATNNNNATC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 1 cut(s) | 226 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 723, 742, 753, 772 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 665, 728, 837 |
| Bse1I | ACTGG | 3 cut(s) | 76, 144, 535 |
| Bse8I | GATNNNNATC | 1 cut(s) | 162 |
| BseDI | CCNNGG | 1 cut(s) | 226 |
| BseGI | GGATG | 2 cut(s) | 769, 846 |
| BseJI | GATNNNNATC | 1 cut(s) | 162 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 665, 728, 837 |
| BseMII | CTCAG | 3 cut(s) | 108, 614, 684 |
| BseNI | ACTGG | 3 cut(s) | 76, 144, 535 |
| BseRI | GAGGAG | 2 cut(s) | 116, 321 |
| BseYI | CCCAGC | 1 cut(s) | 812 |
| BshFI | GGCC | 1 cut(s) | 768 |
| BsiHKAI | GWGCWC | 1 cut(s) | 296 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 665, 728, 837 |
| BsmAI | GTCTC | 1 cut(s) | 130 |
| BsmI | GAATGC | 1 cut(s) | 308 |
| BsnI | GGCC | 1 cut(s) | 768 |
| Bsp1286I | GDGCHC | 1 cut(s) | 296 |
| Bsp143I | GATC | 2 cut(s) | 113, 775 |
| BspANI | GGCC | 1 cut(s) | 768 |
| BspCNI | CTCAG | 3 cut(s) | 109, 615, 683 |
| BspHI | TCATGA | 1 cut(s) | 553 |
| BspOI | GCTAGC | 1 cut(s) | 812 |
| BspPI | GGATC | 2 cut(s) | 121, 770 |
| BsrI | ACTGG | 3 cut(s) | 76, 144, 535 |
| BssECI | CCNNGG | 1 cut(s) | 226 |
| BssMI | GATC | 2 cut(s) | 113, 775 |
| BssT1I | CCWWGG | 1 cut(s) | 226 |
| Bst4CI | ACNGT | 2 cut(s) | 49, 352 |
| BstC8I | GCNNGC | 2 cut(s) | 667, 810 |
| BstDEI | CTNAG | 4 cut(s) | 117, 314, 623, 670 |
| BstEII | GGTNACC | 1 cut(s) | 258 |
| BstF5I | GGATG | 2 cut(s) | 769, 846 |
| BstKTI | GATC | 2 cut(s) | 116, 778 |
| BstMAI | GTCTC | 1 cut(s) | 130 |
| BstMBI | GATC | 2 cut(s) | 113, 775 |
| BstNSI | RCATGY | 1 cut(s) | 794 |
| BstPI | GGTNACC | 1 cut(s) | 258 |
| BstSFI | CTRYAG | 1 cut(s) | 351 |
| BstX2I | RGATCY | 2 cut(s) | 113, 775 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 355 |
| BstYI | RGATCY | 2 cut(s) | 113, 775 |
| BsuI | GTATCC | 1 cut(s) | 355 |
| BsuRI | GGCC | 1 cut(s) | 768 |
| BtgZI | GCGATG | 1 cut(s) | 26 |
| BtsCI | GGATG | 2 cut(s) | 769, 846 |
| BtsIMutI | CAGTG | 2 cut(s) | 45, 348 |
| Cac8I | GCNNGC | 2 cut(s) | 667, 810 |
| CciI | TCATGA | 1 cut(s) | 553 |
| Cfr13I | GGNCC | 2 cut(s) | 195, 532 |
| Csp6I | GTAC | 2 cut(s) | 396, 485 |
| CviAII | CATG | 3 cut(s) | 554, 754, 791 |
| CviQI | GTAC | 2 cut(s) | 396, 485 |
| DdeI | CTNAG | 4 cut(s) | 117, 314, 623, 670 |
| DpnI | GATC | 2 cut(s) | 115, 777 |
| DpnII | GATC | 2 cut(s) | 113, 775 |
| EaeI | YGGCCR | 1 cut(s) | 766 |
| Eco130I | CCWWGG | 1 cut(s) | 226 |
| Eco47I | GGWCC | 2 cut(s) | 195, 532 |
| Eco91I | GGTNACC | 1 cut(s) | 258 |
| EcoO65I | GGTNACC | 1 cut(s) | 258 |
| EcoT14I | CCWWGG | 1 cut(s) | 226 |
| ErhI | CCWWGG | 1 cut(s) | 226 |
| FaeI | CATG | 3 cut(s) | 557, 757, 794 |
| FatI | CATG | 3 cut(s) | 553, 753, 790 |
| FauNDI | CATATG | 1 cut(s) | 109 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 9 |
| FokI | GGATG | 2 cut(s) | 776, 853 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 9 |
| FspBI | CTAG | 1 cut(s) | 809 |
| GluI | GCNGC | 2 cut(s) | 6, 9 |
| GsaI | CCCAGC | 1 cut(s) | 816 |
| GsuI | CTGGAG | 1 cut(s) | 769 |
| HaeIII | GGCC | 1 cut(s) | 768 |
| Hin1II | CATG | 3 cut(s) | 557, 757, 794 |
| HinfI | GANTC | 4 cut(s) | 30, 104, 418, 508 |
| HphI | GGTGA | 1 cut(s) | 686 |
| Hpy166II | GTNNAC | 1 cut(s) | 358 |
| Hpy188I | TCNGA | 5 cut(s) | 118, 568, 615, 624, 775 |
| Hpy188III | TCNNGA | 7 cut(s) | 289, 415, 425, 554, 748, 761, 861 |
| Hpy8I | GTNNAC | 1 cut(s) | 358 |
| HpyCH4III | ACNGT | 2 cut(s) | 49, 352 |
| HpyCH4IV | ACGT | 3 cut(s) | 38, 463, 586 |
| HpyCH4V | TGCA | 1 cut(s) | 794 |
| HpyF3I | CTNAG | 4 cut(s) | 117, 314, 623, 670 |
| HpySE526I | ACGT | 3 cut(s) | 38, 463, 586 |
| Hsp92II | CATG | 3 cut(s) | 557, 757, 794 |
| Kzo9I | GATC | 2 cut(s) | 113, 775 |
| LmnI | GCTCC | 1 cut(s) | 750 |
| LweI | GCATC | 1 cut(s) | 724 |
| MaeI | CTAG | 1 cut(s) | 809 |
| MaeII | ACGT | 3 cut(s) | 38, 463, 586 |
| MaeIII | GTNAC | 3 cut(s) | 43, 258, 626 |
| MalI | GATC | 2 cut(s) | 115, 777 |
| MboI | GATC | 2 cut(s) | 113, 775 |
| MboII | GAAGA | 2 cut(s) | 28, 105 |
| MfeI | CAATTG | 1 cut(s) | 453 |
| MflI | RGATCY | 2 cut(s) | 113, 775 |
| MhlI | GDGCHC | 1 cut(s) | 296 |
| MlsI | TGGCCA | 1 cut(s) | 768 |
| MluCI | AATT | 5 cut(s) | 170, 216, 270, 453, 609 |
| MluNI | TGGCCA | 1 cut(s) | 768 |
| MlyI | GAGTC | 3 cut(s) | 24, 113, 427 |
| MmeI | TCCRAC | 1 cut(s) | 31 |
| Mox20I | TGGCCA | 1 cut(s) | 768 |
| MroXI | GAANNNNTTC | 2 cut(s) | 434, 507 |
| MscI | TGGCCA | 1 cut(s) | 768 |
| MseI | TTAA | 2 cut(s) | 168, 576 |
| MslI | CAYNNNNRTG | 1 cut(s) | 353 |
| Msp20I | TGGCCA | 1 cut(s) | 768 |
| MunI | CAATTG | 1 cut(s) | 453 |
| Mva1269I | GAATGC | 1 cut(s) | 308 |
| NdeI | CATATG | 1 cut(s) | 109 |
| NdeII | GATC | 2 cut(s) | 113, 775 |
| NheI | GCTAGC | 1 cut(s) | 808 |
| NlaIII | CATG | 3 cut(s) | 557, 757, 794 |
| NmuCI | GTSAC | 2 cut(s) | 43, 626 |
| NspI | RCATGY | 1 cut(s) | 794 |
| OliI | CACNNNNGTG | 1 cut(s) | 353 |
| PagI | TCATGA | 1 cut(s) | 553 |
| PctI | GAATGC | 1 cut(s) | 308 |
| PdmI | GAANNNNTTC | 2 cut(s) | 434, 507 |
| PfeI | GAWTC | 1 cut(s) | 508 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 837 |
| PkrI | GCNGC | 2 cut(s) | 7, 10 |
| PleI | GAGTC | 3 cut(s) | 24, 112, 426 |
| PpsI | GAGTC | 3 cut(s) | 24, 112, 426 |
| PsiI | TTATAA | 1 cut(s) | 543 |
| PspEI | GGTNACC | 1 cut(s) | 258 |
| PspFI | CCCAGC | 1 cut(s) | 812 |
| PspPI | GGNCC | 2 cut(s) | 195, 532 |
| PsuI | RGATCY | 2 cut(s) | 113, 775 |
| RsaI | GTAC | 2 cut(s) | 397, 486 |
| RsaNI | GTAC | 2 cut(s) | 396, 485 |
| RseI | CAYNNNNRTG | 1 cut(s) | 353 |
| SaqAI | TTAA | 2 cut(s) | 168, 576 |
| SatI | GCNGC | 2 cut(s) | 6, 9 |
| Sau3AI | GATC | 2 cut(s) | 113, 775 |
| Sau96I | GGNCC | 2 cut(s) | 195, 532 |
| SchI | GAGTC | 3 cut(s) | 24, 113, 427 |
| SduI | GDGCHC | 1 cut(s) | 296 |
| SfaNI | GCATC | 1 cut(s) | 724 |
| SfcI | CTRYAG | 1 cut(s) | 351 |
| SinI | GGWCC | 2 cut(s) | 195, 532 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 353 |
| SmlI | CTYRAG | 4 cut(s) | 289, 415, 423, 480 |
| SmoI | CTYRAG | 4 cut(s) | 289, 415, 423, 480 |
| Sse9I | AATT | 5 cut(s) | 170, 216, 270, 453, 609 |
| SspMI | CTAG | 1 cut(s) | 809 |
| StyI | CCWWGG | 1 cut(s) | 226 |
| TaaI | ACNGT | 2 cut(s) | 49, 352 |
| TaiI | ACGT | 3 cut(s) | 41, 466, 589 |
| TaqI | TCGA | 1 cut(s) | 265 |
| TasI | AATT | 5 cut(s) | 170, 216, 270, 453, 609 |
| TfiI | GAWTC | 1 cut(s) | 508 |
| Tru1I | TTAA | 2 cut(s) | 168, 576 |
| Tru9I | TTAA | 2 cut(s) | 168, 576 |
| TscAI | CASTG | 2 cut(s) | 52, 355 |
| TseFI | GTSAC | 2 cut(s) | 43, 626 |
| TseI | GCWGC | 2 cut(s) | 5, 8 |
| Tsp45I | GTSAC | 2 cut(s) | 43, 626 |
| TspDTI | ATGAA | 3 cut(s) | 29, 269, 540 |
| TspGWI | ACGGA | 1 cut(s) | 311 |
| TspRI | CASTG | 2 cut(s) | 52, 355 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 837 |
| VpaK11BI | GGWCC | 2 cut(s) | 195, 532 |
| XapI | RAATTY | 2 cut(s) | 170, 216 |
| XceI | RCATGY | 1 cut(s) | 794 |
| XmnI | GAANNNNTTC | 2 cut(s) | 434, 507 |
| XspI | CTAG | 1 cut(s) | 809 |