Belongs to the tRNA nucleotidyltransferase poly(A) polymerase family
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0141651 RchiOBHm_Chr4g0411731 RchiOBHm_Chr4g0411861 |
| rosa_laevigata | RLG00000013187 RLG00000018463 RLG00000022578 RLG00000022690 RLG00000036212 |
| rosa_roxburghii | Rroxscaffold_2G00137600 Rroxscaffold_6G00395140 |
| rosa_rugosa | Rorug06G0446000 |
| rosa_samantha | Rh4AG170900 Rh4BG166900 Rh4BG206400 Rh6DG222700 Rh7AG392900 Rh7BG049000 |
| rosa_wichuraiana | Rw2G034390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 496 |
| AcuI | CTGAAG | 1 cut(s) | 563 |
| AfaI | GTAC | 3 cut(s) | 34, 279, 565 |
| AgsI | TTSAA | 3 cut(s) | 50, 73, 561 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 461 |
| AjnI | CCWGG | 1 cut(s) | 448 |
| AluBI | AGCT | 3 cut(s) | 442, 484, 499 |
| AluI | AGCT | 3 cut(s) | 442, 484, 499 |
| ApeKI | GCWGC | 3 cut(s) | 104, 439, 496 |
| AseI | ATTAAT | 1 cut(s) | 228 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 91 |
| AspS9I | GGNCC | 1 cut(s) | 455 |
| AsuC2I | CCSGG | 1 cut(s) | 392 |
| AvaII | GGWCC | 1 cut(s) | 455 |
| BaeGI | GKGCMC | 1 cut(s) | 63 |
| BbsI | GAAGAC | 1 cut(s) | 134 |
| BbvI | GCAGC | 3 cut(s) | 91, 451, 508 |
| BciT130I | CCWGG | 1 cut(s) | 450 |
| BcnI | CCSGG | 1 cut(s) | 392 |
| BfaI | CTAG | 2 cut(s) | 380, 567 |
| BfmI | CTRYAG | 1 cut(s) | 519 |
| BfuAI | ACCTGC | 1 cut(s) | 496 |
| BglII | AGATCT | 1 cut(s) | 569 |
| BisI | GCNGC | 3 cut(s) | 105, 440, 497 |
| BlsI | GCNGC | 3 cut(s) | 106, 441, 498 |
| BmcAI | AGTACT | 1 cut(s) | 565 |
| Bme1390I | CCNGG | 2 cut(s) | 392, 450 |
| Bme18I | GGWCC | 1 cut(s) | 455 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 461 |
| BmgT120I | GGNCC | 1 cut(s) | 455 |
| BmrFI | CCNGG | 2 cut(s) | 392, 450 |
| BmsI | GCATC | 2 cut(s) | 229, 421 |
| BpiI | GAAGAC | 1 cut(s) | 134 |
| BpmI | CTGGAG | 2 cut(s) | 471, 597 |
| BpuEI | CTTGAG | 1 cut(s) | 518 |
| BpuMI | CCSGG | 1 cut(s) | 392 |
| Bse3DI | GCAATG | 2 cut(s) | 114, 217 |
| BseBI | CCWGG | 1 cut(s) | 450 |
| BseGI | GGATG | 4 cut(s) | 295, 400, 436, 505 |
| BseMI | GCAATG | 2 cut(s) | 114, 217 |
| BseSI | GKGCMC | 1 cut(s) | 63 |
| BseXI | GCAGC | 3 cut(s) | 91, 451, 508 |
| BsiSI | CCGG | 1 cut(s) | 391 |
| BslFI | GGGAC | 1 cut(s) | 529 |
| BsmFI | GGGAC | 1 cut(s) | 529 |
| BsmI | GAATGC | 1 cut(s) | 533 |
| Bsp1286I | GDGCHC | 1 cut(s) | 63 |
| Bsp1407I | TGTACA | 2 cut(s) | 32, 277 |
| Bsp143I | GATC | 4 cut(s) | 331, 423, 569, 628 |
| BspMAI | CTGCAG | 1 cut(s) | 523 |
| BspMI | ACCTGC | 1 cut(s) | 496 |
| BsrDI | GCAATG | 2 cut(s) | 114, 217 |
| BsrGI | TGTACA | 2 cut(s) | 32, 277 |
| BssMI | GATC | 4 cut(s) | 331, 423, 569, 628 |
| Bst2UI | CCWGG | 1 cut(s) | 450 |
| Bst4CI | ACNGT | 1 cut(s) | 223 |
| Bst6I | CTCTTC | 2 cut(s) | 313, 562 |
| BstAUI | TGTACA | 2 cut(s) | 32, 277 |
| BstC8I | GCNNGC | 1 cut(s) | 501 |
| BstDEI | CTNAG | 1 cut(s) | 122 |
| BstF5I | GGATG | 4 cut(s) | 295, 400, 436, 505 |
| BstKTI | GATC | 4 cut(s) | 334, 426, 572, 631 |
| BstMBI | GATC | 4 cut(s) | 331, 423, 569, 628 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 481 |
| BstNI | CCWGG | 1 cut(s) | 450 |
| BstSCI | CCNGG | 2 cut(s) | 390, 448 |
| BstSFI | CTRYAG | 1 cut(s) | 519 |
| BstSLI | GKGCMC | 1 cut(s) | 63 |
| BstV1I | GCAGC | 3 cut(s) | 91, 451, 508 |
| BstV2I | GAAGAC | 1 cut(s) | 134 |
| BstX2I | RGATCY | 1 cut(s) | 569 |
| BstYI | RGATCY | 1 cut(s) | 569 |
| BtsCI | GGATG | 4 cut(s) | 295, 400, 436, 505 |
| BveI | ACCTGC | 1 cut(s) | 496 |
| Cac8I | GCNNGC | 1 cut(s) | 501 |
| Cfr13I | GGNCC | 1 cut(s) | 455 |
| Csp6I | GTAC | 3 cut(s) | 33, 278, 564 |
| CviAII | CATG | 3 cut(s) | 36, 427, 492 |
| CviJI | RGCY | 6 cut(s) | 91, 403, 442, 484, 499, 541 |
| CviKI_1 | RGCY | 6 cut(s) | 91, 403, 442, 484, 499, 541 |
| CviQI | GTAC | 3 cut(s) | 33, 278, 564 |
| DdeI | CTNAG | 1 cut(s) | 122 |
| DpnI | GATC | 4 cut(s) | 333, 425, 571, 630 |
| DpnII | GATC | 4 cut(s) | 331, 423, 569, 628 |
| DriI | GACNNNNNGTC | 1 cut(s) | 461 |
| Eam1104I | CTCTTC | 2 cut(s) | 313, 562 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 461 |
| EarI | CTCTTC | 2 cut(s) | 313, 562 |
| Eco47I | GGWCC | 1 cut(s) | 455 |
| Eco57I | CTGAAG | 1 cut(s) | 563 |
| EcoRII | CCWGG | 1 cut(s) | 448 |
| EcoT22I | ATGCAT | 1 cut(s) | 244 |
| FaeI | CATG | 3 cut(s) | 39, 430, 495 |
| FaqI | GGGAC | 1 cut(s) | 529 |
| FatI | CATG | 3 cut(s) | 35, 426, 491 |
| Fnu4HI | GCNGC | 3 cut(s) | 105, 440, 497 |
| FokI | GGATG | 4 cut(s) | 302, 407, 443, 492 |
| Fsp4HI | GCNGC | 3 cut(s) | 105, 440, 497 |
| FspBI | CTAG | 2 cut(s) | 380, 567 |
| GluI | GCNGC | 3 cut(s) | 105, 440, 497 |
| GsuI | CTGGAG | 2 cut(s) | 471, 597 |
| HapII | CCGG | 1 cut(s) | 391 |
| Hin1II | CATG | 3 cut(s) | 39, 430, 495 |
| HincII | GTYRAC | 1 cut(s) | 372 |
| HindII | GTYRAC | 1 cut(s) | 372 |
| HinfI | GANTC | 4 cut(s) | 40, 188, 204, 353 |
| HpaI | GTTAAC | 1 cut(s) | 372 |
| HpaII | CCGG | 1 cut(s) | 391 |
| Hpy166II | GTNNAC | 1 cut(s) | 372 |
| Hpy188I | TCNGA | 1 cut(s) | 365 |
| Hpy188III | TCNNGA | 3 cut(s) | 169, 380, 632 |
| Hpy8I | GTNNAC | 1 cut(s) | 372 |
| HpyAV | CCTTC | 3 cut(s) | 81, 125, 538 |
| HpyCH4III | ACNGT | 1 cut(s) | 223 |
| HpyCH4V | TGCA | 6 cut(s) | 20, 107, 242, 439, 491, 521 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 481 |
| HpyF3I | CTNAG | 1 cut(s) | 122 |
| Hsp92II | CATG | 3 cut(s) | 39, 430, 495 |
| KspAI | GTTAAC | 1 cut(s) | 372 |
| Kzo9I | GATC | 4 cut(s) | 331, 423, 569, 628 |
| LpnPI | CCDG | 7 cut(s) | 177, 360, 404, 435, 462, 501, 561 |
| Lsp1109I | GCAGC | 3 cut(s) | 91, 451, 508 |
| LweI | GCATC | 2 cut(s) | 229, 421 |
| MaeI | CTAG | 2 cut(s) | 380, 567 |
| MaeIII | GTNAC | 1 cut(s) | 632 |
| MalI | GATC | 4 cut(s) | 333, 425, 571, 630 |
| MboI | GATC | 4 cut(s) | 331, 423, 569, 628 |
| MboII | GAAGA | 4 cut(s) | 139, 330, 549, 638 |
| MflI | RGATCY | 1 cut(s) | 569 |
| MhlI | GDGCHC | 1 cut(s) | 63 |
| MluCI | AATT | 3 cut(s) | 50, 172, 229 |
| MlyI | GAGTC | 2 cut(s) | 182, 213 |
| MnlI | CCTC | 6 cut(s) | 279, 348, 446, 517, 542, 580 |
| Mph1103I | ATGCAT | 1 cut(s) | 244 |
| MroXI | GAANNNNTTC | 1 cut(s) | 91 |
| MseI | TTAA | 5 cut(s) | 195, 228, 371, 411, 444 |
| MspI | CCGG | 1 cut(s) | 391 |
| MspR9I | CCNGG | 2 cut(s) | 392, 450 |
| Mva1269I | GAATGC | 1 cut(s) | 533 |
| MvaI | CCWGG | 1 cut(s) | 450 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 481 |
| NciI | CCSGG | 1 cut(s) | 392 |
| NdeII | GATC | 4 cut(s) | 331, 423, 569, 628 |
| NlaIII | CATG | 3 cut(s) | 39, 430, 495 |
| NmuCI | GTSAC | 1 cut(s) | 632 |
| NsiI | ATGCAT | 1 cut(s) | 244 |
| PctI | GAATGC | 1 cut(s) | 533 |
| PdmI | GAANNNNTTC | 1 cut(s) | 91 |
| PfeI | GAWTC | 2 cut(s) | 40, 353 |
| PfoI | TCCNGGA | 1 cut(s) | 390 |
| PkrI | GCNGC | 3 cut(s) | 106, 441, 498 |
| PleI | GAGTC | 2 cut(s) | 182, 212 |
| PpsI | GAGTC | 2 cut(s) | 182, 212 |
| PshBI | ATTAAT | 1 cut(s) | 228 |
| Psp6I | CCWGG | 1 cut(s) | 448 |
| PspGI | CCWGG | 1 cut(s) | 448 |
| PspPI | GGNCC | 1 cut(s) | 455 |
| PstI | CTGCAG | 1 cut(s) | 523 |
| PsuI | RGATCY | 1 cut(s) | 569 |
| RsaI | GTAC | 3 cut(s) | 34, 279, 565 |
| RsaNI | GTAC | 3 cut(s) | 33, 278, 564 |
| SaqAI | TTAA | 5 cut(s) | 195, 228, 371, 411, 444 |
| SatI | GCNGC | 3 cut(s) | 105, 440, 497 |
| Sau3AI | GATC | 4 cut(s) | 331, 423, 569, 628 |
| Sau96I | GGNCC | 1 cut(s) | 455 |
| ScaI | AGTACT | 1 cut(s) | 565 |
| SchI | GAGTC | 2 cut(s) | 182, 213 |
| ScrFI | CCNGG | 2 cut(s) | 392, 450 |
| SduI | GDGCHC | 1 cut(s) | 63 |
| SetI | ASST | 6 cut(s) | 379, 444, 451, 486, 490, 501 |
| SfaNI | GCATC | 2 cut(s) | 229, 421 |
| SfcI | CTRYAG | 1 cut(s) | 519 |
| SinI | GGWCC | 1 cut(s) | 455 |
| SmlI | CTYRAG | 1 cut(s) | 533 |
| SmoI | CTYRAG | 1 cut(s) | 533 |
| Sse9I | AATT | 3 cut(s) | 50, 172, 229 |
| SspMI | CTAG | 2 cut(s) | 380, 567 |
| StyD4I | CCNGG | 2 cut(s) | 390, 448 |
| TaaI | ACNGT | 1 cut(s) | 223 |
| TaqI | TCGA | 1 cut(s) | 347 |
| TasI | AATT | 3 cut(s) | 50, 172, 229 |
| TatI | WGTACW | 3 cut(s) | 32, 277, 563 |
| TfiI | GAWTC | 2 cut(s) | 40, 353 |
| Tru1I | TTAA | 5 cut(s) | 195, 228, 371, 411, 444 |
| Tru9I | TTAA | 5 cut(s) | 195, 228, 371, 411, 444 |
| TseFI | GTSAC | 1 cut(s) | 632 |
| TseI | GCWGC | 3 cut(s) | 104, 439, 496 |
| Tsp45I | GTSAC | 1 cut(s) | 632 |
| TspGWI | ACGGA | 1 cut(s) | 85 |
| VpaK11BI | GGWCC | 1 cut(s) | 455 |
| VspI | ATTAAT | 1 cut(s) | 228 |
| XbaI | TCTAGA | 1 cut(s) | 379 |
| XmnI | GAANNNNTTC | 1 cut(s) | 91 |
| XspI | CTAG | 2 cut(s) | 380, 567 |
| ZrmI | AGTACT | 1 cut(s) | 565 |
| Zsp2I | ATGCAT | 1 cut(s) | 244 |