RchiOBHm_Chr4g0439561
ERF Family

mTERF

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
61967929 .. 61969326
1398 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ40761

Sequence Viewer

Length: 1122 bp
ATGACAAGATTTGTGACACCTATAGGCTTGGACCATACCAAAAAAGGAACGTTAATAATAGATAGAAAACATGATCTTGAATTCCGACGACGTGTCGTATGTCAAAAAAGTGATGATCGGAGGAGGAGGGCCTTGGATAAAAGGTCATCATCAGAGTACTTGCACCGAGTACGCGCTGAAGCTAGACCTCAGACCATGACACTCCGACCTCACACTCTCTTCCTCCCTCAAGCCTCCTTAACCCCCCCATCTCCTAAACCCTCCAAAAACCCTTCCAACTCCTTCACCCCAACTCTCAATTCCCCAATCTACCCCTCCCTCTCCCTCCACCACCACCACCCAACCACCCCCACCGACTCCGGCATCCTCTTCCGCGAAAAGCTCATCTACCTCGAAAGCCACCTCAACGTCAATCCCCAAAAAGCCCTCCATCTAAACCCCGACTTCCGCTCCTGCCCCCTCTCCTCCGTCAAGTCCGTCGAGCACTGCCTCTCCTCCATGGGCATCGAGCTCTCCGCCATGGGCCGCATCCTCGACATGCACCCCCAGCTCCTCACCGTGGACCCCCACTCCCACCTCTACCCCGTCTTCGACTTCCTCCTCCACGACGCCCATATCCCCTTCCACGATATCCGCAAGTCCATCGTCCGCTGCCCCAGGCTCCTCGTCTGTGACGTCAGCAACCAACTCCGACCCGCCTTGGAGTTCCTGACCCAACTAGGTTTTAAGGGCGTGACGTGCCAGACCACGGTCCTATTGGTCTCGAGCGTCAGAGGTACCCTTTTGCCCAAGATTGAGTATTTGCAGAGTCTGGGCCTGAGTCACGCGGAGGTGGCCAACATGGTGATAAGGTCGCCGGCGCTGTTGACTCTCAGCATACACAACAATTTCATGCCGAAAGTCGAGTATTTAGTGCAAGAGATGAAGAAAGATGTGAAGGAGCTCAAGAGGTTTCCGCAGTACTTTTCGTTTAGTTTGGAGGGGAGGATTAAGCCTAGGCACAGATTGTTGGCTGAGCACGGCTTTTCGCTTCCGTTGAGGGACATGTTGAGGGTTAGTGATGGCGAGTTTAATGCTATGTTGATTGAGATGCGATTGGATTGCACAGGCTTGAGTCATTAA

Protein Analysis

373

Amino Acids

42.65

Weight (kDa)

9.59

Isoelectric Point (pI)

50.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 210 - 357 4.5e-32 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011186)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 678
Acc65I GGTACC 1 cut(s) 776
AccB1I GGYRCC 1 cut(s) 776
AccBSI CCGCTC 1 cut(s) 450
AccII CGCG 3 cut(s) 174, 375, 827
AciI CCGC 9 cut(s) 373, 448, 516, 526, 634, 649, 696, 827, 956
AclI AACGTT 1 cut(s) 50
AcoI YGGCCR 1 cut(s) 834
AcsI RAATTY 1 cut(s) 80
AcuI CTGAAG 1 cut(s) 198
AcyI GRCGYC 2 cut(s) 609, 675
AfaI GTAC 4 cut(s) 158, 171, 778, 962
AfiI CCNNNNNNNGG 2 cut(s) 559, 748
AflIII ACRYGT 2 cut(s) 91, 1044
AgsI TTSAA 1 cut(s) 80
AhdI GACNNNNNGTC 1 cut(s) 92
AjiI CACGTC 2 cut(s) 92, 738
AjnI CCWGG 1 cut(s) 656
AjuI GAANNNNNNNTTGG 2 cut(s) 283, 315
AluBI AGCT 5 cut(s) 182, 382, 511, 550, 943
AluI AGCT 5 cut(s) 182, 382, 511, 550, 943
Alw21I GWGCWC 4 cut(s) 486, 513, 945, 1020
Alw26I GTCTC 1 cut(s) 766
AlwNI CAGNNNCTG 1 cut(s) 811
Ama87I CYCGRG 1 cut(s) 763
AoxI GGCC 4 cut(s) 129, 523, 814, 834
ApeKI GCWGC 1 cut(s) 651
ApoI RAATTY 1 cut(s) 80
Asp718I GGTACC 1 cut(s) 776
AspA2I CCTAGG 1 cut(s) 995
AspLEI GCGC 2 cut(s) 176, 862
AspS9I GGNCC 6 cut(s) 31, 129, 523, 562, 751, 814
AsuHPI GGTGA 3 cut(s) 277, 547, 856
AvaI CYCGRG 1 cut(s) 763
AvaII GGWCC 3 cut(s) 31, 562, 751
AvrII CCTAGG 1 cut(s) 995
BalI TGGCCA 1 cut(s) 836
BanI GGYRCC 1 cut(s) 776
BanII GRGCYC 2 cut(s) 513, 945
BbsI GAAGAC 1 cut(s) 580
Bbv12I GWGCWC 4 cut(s) 486, 513, 945, 1020
BbvI GCAGC 1 cut(s) 638
BccI CCATC 4 cut(s) 256, 438, 650, 1055
BceAI ACGGC 1 cut(s) 1036
BcgI CGANNNNNNTGC 6 cut(s) 625, 659, 1055, 1083, 1089, 1117
BciT130I CCWGG 1 cut(s) 658
BcoDI GTCTC 1 cut(s) 766
BfaI CTAG 3 cut(s) 183, 719, 996
BfmI CTRYAG 1 cut(s) 21
BfoI RGCGCY 1 cut(s) 863
BisI GCNGC 2 cut(s) 526, 652
BlnI CCTAGG 1 cut(s) 995
BlpI GCTNAGC 1 cut(s) 1014
BlsI GCNGC 2 cut(s) 527, 653
BmcAI AGTACT 2 cut(s) 158, 962
Bme1390I CCNGG 1 cut(s) 658
Bme18I GGWCC 3 cut(s) 31, 562, 751
BmeRI GACNNNNNGTC 1 cut(s) 92
BmeT110I CYCGRG 1 cut(s) 763
BmgBI CACGTC 2 cut(s) 92, 738
BmgT120I GGNCC 6 cut(s) 31, 129, 523, 562, 751, 814
BmiI GGNNCC 3 cut(s) 564, 662, 778
BmrFI CCNGG 1 cut(s) 658
BmsI GCATC 4 cut(s) 372, 513, 537, 1080
BoxI GACNNNNGTC 1 cut(s) 749
BpiI GAAGAC 1 cut(s) 580
Bpu1102I GCTNAGC 1 cut(s) 1014
BpuEI CTTGAG 2 cut(s) 213, 929
BsaHI GRCGYC 2 cut(s) 609, 675
BsaI GGTCTC 1 cut(s) 766
BsaJI CCNNGG 8 cut(s) 132, 498, 519, 558, 656, 699, 747, 995
BsaXI ACNNNNNCTCC 6 cut(s) 434, 464, 476, 506, 554, 584
Bsc4I CCNNNNNNNGG 2 cut(s) 559, 748
Bse118I RCCGGY 1 cut(s) 856
BseBI CCWGG 1 cut(s) 658
BseDI CCNNGG 8 cut(s) 132, 498, 519, 558, 656, 699, 747, 995
BseGI GGATG 2 cut(s) 363, 528
BseLI CCNNNNNNNGG 2 cut(s) 559, 748
BseMII CTCAG 4 cut(s) 203, 809, 886, 1005
BseRI GAGGAG 7 cut(s) 136, 139, 454, 484, 542, 590, 653
BseXI GCAGC 1 cut(s) 638
BseYI CCCAGC 1 cut(s) 546
Bsh1236I CGCG 3 cut(s) 174, 375, 827
BshFI GGCC 4 cut(s) 131, 525, 816, 836
BshNI GGYRCC 1 cut(s) 776
BsiHKAI GWGCWC 4 cut(s) 486, 513, 945, 1020
BsiHKCI CYCGRG 1 cut(s) 763
BsiSI CCGG 2 cut(s) 360, 857
BslFI GGGAC 1 cut(s) 1055
BslI CCNNNNNNNGG 2 cut(s) 559, 748
BsmAI GTCTC 1 cut(s) 766
BsmFI GGGAC 1 cut(s) 1055
BsnI GGCC 4 cut(s) 131, 525, 816, 836
Bso31I GGTCTC 1 cut(s) 766
BsoBI CYCGRG 1 cut(s) 763
Bsp1286I GDGCHC 4 cut(s) 486, 513, 945, 1020
Bsp143I GATC 2 cut(s) 73, 115
Bsp1720I GCTNAGC 1 cut(s) 1014
Bsp19I CCATGG 2 cut(s) 498, 519
BspACI CCGC 9 cut(s) 373, 448, 516, 526, 634, 649, 696, 827, 956
BspANI GGCC 4 cut(s) 131, 525, 816, 836
BspCNI CTCAG 4 cut(s) 202, 810, 885, 1006
BspFNI CGCG 3 cut(s) 174, 375, 827
BspLI GGNNCC 3 cut(s) 564, 662, 778
BspT107I GGYRCC 1 cut(s) 776
BspTNI GGTCTC 1 cut(s) 766
BsrBI CCGCTC 1 cut(s) 450
BsrFI RCCGGY 1 cut(s) 856
BssAI RCCGGY 1 cut(s) 856
BssECI CCNNGG 8 cut(s) 132, 498, 519, 558, 656, 699, 747, 995
BssMI GATC 2 cut(s) 73, 115
BssNI GRCGYC 2 cut(s) 609, 675
BssT1I CCWWGG 5 cut(s) 132, 498, 519, 699, 995
Bst2UI CCWGG 1 cut(s) 658
Bst4CI ACNGT 2 cut(s) 559, 751
Bst6I CTCTTC 2 cut(s) 224, 374
BstACI GRCGYC 2 cut(s) 609, 675
BstC8I GCNNGC 1 cut(s) 858
BstDEI CTNAG 4 cut(s) 189, 818, 872, 1014
BstDSI CCRYGG 4 cut(s) 498, 519, 558, 747
BstF5I GGATG 2 cut(s) 363, 528
BstFNI CGCG 3 cut(s) 174, 375, 827
BstH2I RGCGCY 1 cut(s) 863
BstHHI GCGC 2 cut(s) 176, 862
BstKTI GATC 2 cut(s) 76, 118
BstMAI GTCTC 1 cut(s) 766
BstMBI GATC 2 cut(s) 73, 115
BstMWI GCNNNNNNNGC 3 cut(s) 547, 738, 833
BstNI CCWGG 1 cut(s) 658
BstNSI RCATGY 2 cut(s) 541, 1048
BstPAI GACNNNNGTC 1 cut(s) 749
BstSCI CCNGG 1 cut(s) 656
BstSFI CTRYAG 1 cut(s) 21
BstUI CGCG 3 cut(s) 174, 375, 827
BstV1I GCAGC 1 cut(s) 638
BstV2I GAAGAC 1 cut(s) 580
BsuRI GGCC 4 cut(s) 131, 525, 816, 836
BtgI CCRYGG 4 cut(s) 498, 519, 558, 747
BtrI CACGTC 2 cut(s) 92, 738
BtsCI GGATG 2 cut(s) 363, 528
BtsI GCAGTG 1 cut(s) 484
BtsIMutI CAGTG 1 cut(s) 484
Cac8I GCNNGC 1 cut(s) 858
CaiI CAGNNNCTG 1 cut(s) 811
CfoI GCGC 2 cut(s) 176, 862
Cfr10I RCCGGY 1 cut(s) 856
Cfr13I GGNCC 6 cut(s) 31, 129, 523, 562, 751, 814
CseI GACGC 2 cut(s) 617, 757
Csp6I GTAC 4 cut(s) 157, 170, 777, 961
CviAII CATG 8 cut(s) 71, 196, 499, 520, 538, 841, 892, 1045
CviQI GTAC 4 cut(s) 157, 170, 777, 961
DdeI CTNAG 4 cut(s) 189, 818, 872, 1014
DpnI GATC 2 cut(s) 75, 117
DpnII GATC 2 cut(s) 73, 115
DriI GACNNNNNGTC 1 cut(s) 92
EaeI YGGCCR 1 cut(s) 834
Eam1104I CTCTTC 2 cut(s) 224, 374
Eam1105I GACNNNNNGTC 1 cut(s) 92
EarI CTCTTC 2 cut(s) 224, 374
EciI GGCGGA 1 cut(s) 505
Ecl136II GAGCTC 2 cut(s) 511, 943
Eco130I CCWWGG 5 cut(s) 132, 498, 519, 699, 995
Eco24I GRGCYC 2 cut(s) 513, 945
Eco31I GGTCTC 1 cut(s) 766
Eco32I GATATC 1 cut(s) 631
Eco47I GGWCC 3 cut(s) 31, 562, 751
Eco53kI GAGCTC 2 cut(s) 511, 943
Eco57I CTGAAG 1 cut(s) 198
Eco88I CYCGRG 1 cut(s) 763
EcoICRI GAGCTC 2 cut(s) 511, 943
EcoO109I RGGNCCY 1 cut(s) 129
EcoRI GAATTC 1 cut(s) 80
EcoRII CCWGG 1 cut(s) 656
EcoRV GATATC 1 cut(s) 631
EcoT14I CCWWGG 5 cut(s) 132, 498, 519, 699, 995
EcoT38I GRGCYC 2 cut(s) 513, 945
ErhI CCWWGG 5 cut(s) 132, 498, 519, 699, 995
FaeI CATG 8 cut(s) 74, 199, 502, 523, 541, 844, 895, 1048
FaqI GGGAC 1 cut(s) 1055
FatI CATG 8 cut(s) 70, 195, 498, 519, 537, 840, 891, 1044
FauI CCCGC 1 cut(s) 703
Fnu4HI GCNGC 2 cut(s) 526, 652
FokI GGATG 2 cut(s) 350, 515
FriOI GRGCYC 2 cut(s) 513, 945
Fsp4HI GCNGC 2 cut(s) 526, 652
FspBI CTAG 3 cut(s) 183, 719, 996
GlaI GCGC 2 cut(s) 175, 861
GluI GCNGC 2 cut(s) 526, 652
GsaI CCCAGC 1 cut(s) 550
HaeII RGCGCY 1 cut(s) 863
HaeIII GGCC 4 cut(s) 131, 525, 816, 836
HapII CCGG 2 cut(s) 360, 857
HgaI GACGC 2 cut(s) 617, 757
HhaI GCGC 2 cut(s) 176, 862
Hin1I GRCGYC 2 cut(s) 609, 675
Hin1II CATG 8 cut(s) 74, 199, 502, 523, 541, 844, 895, 1048
Hin6I GCGC 2 cut(s) 174, 860
HinP1I GCGC 2 cut(s) 174, 860
HincII GTYRAC 1 cut(s) 867
HindII GTYRAC 1 cut(s) 867
HinfI GANTC 5 cut(s) 356, 808, 820, 868, 1114
HpaII CCGG 2 cut(s) 360, 857
HphI GGTGA 3 cut(s) 277, 547, 856
Hpy166II GTNNAC 2 cut(s) 562, 867
Hpy188I TCNGA 7 cut(s) 86, 120, 154, 192, 206, 692, 773
Hpy188III TCNNGA 4 cut(s) 77, 709, 763, 946
Hpy8I GTNNAC 2 cut(s) 562, 867
Hpy99I CGWCG 4 cut(s) 90, 93, 482, 611
HpyAV CCTTC 4 cut(s) 282, 292, 631, 931
HpyCH4III ACNGT 2 cut(s) 559, 751
HpyCH4IV ACGT 5 cut(s) 50, 91, 408, 675, 737
HpyCH4V TGCA 5 cut(s) 163, 541, 805, 916, 1104
HpyF10VI GCNNNNNNNGC 3 cut(s) 547, 738, 833
HpyF3I CTNAG 4 cut(s) 189, 818, 872, 1014
HpySE526I ACGT 5 cut(s) 50, 91, 408, 675, 737
Hsp92I GRCGYC 2 cut(s) 609, 675
Hsp92II CATG 8 cut(s) 74, 199, 502, 523, 541, 844, 895, 1048
HspAI GCGC 2 cut(s) 174, 860
KpnI GGTACC 1 cut(s) 780
KroI GCCGGC 1 cut(s) 856
KroNI GCCGGC 1 cut(s) 858
Kzo9I GATC 2 cut(s) 73, 115
LmnI GCTCC 4 cut(s) 455, 555, 666, 940
Lsp1109I GCAGC 1 cut(s) 638
LweI GCATC 4 cut(s) 372, 513, 537, 1080
MaeI CTAG 3 cut(s) 183, 719, 996
MaeII ACGT 5 cut(s) 50, 91, 408, 675, 737
MaeIII GTNAC 4 cut(s) 13, 671, 733, 821
MalI GATC 2 cut(s) 75, 117
MbiI CCGCTC 1 cut(s) 450
MboI GATC 2 cut(s) 73, 115
MboII GAAGA 4 cut(s) 211, 361, 580, 937
MhlI GDGCHC 4 cut(s) 486, 513, 945, 1020
MlsI TGGCCA 1 cut(s) 836
MluCI AATT 3 cut(s) 80, 298, 886
MluNI TGGCCA 1 cut(s) 836
MlyI GAGTC 4 cut(s) 350, 817, 829, 862
MmeI TCCRAC 4 cut(s) 109, 229, 300, 715
Mox20I TGGCCA 1 cut(s) 836
MreI CGCCGGCG 1 cut(s) 856
MroNI GCCGGC 1 cut(s) 856
MscI TGGCCA 1 cut(s) 836
MseI TTAA 6 cut(s) 53, 239, 726, 990, 1071, 1120
Msp20I TGGCCA 1 cut(s) 836
MspA1I CMGCKG 1 cut(s) 651
MspI CCGG 2 cut(s) 360, 857
MspR9I CCNGG 1 cut(s) 658
MvaI CCWGG 1 cut(s) 658
MvnI CGCG 3 cut(s) 174, 375, 827
MwoI GCNNNNNNNGC 3 cut(s) 547, 738, 833
NaeI GCCGGC 1 cut(s) 858
NcoI CCATGG 2 cut(s) 498, 519
NdeII GATC 2 cut(s) 73, 115
NgoMIV GCCGGC 1 cut(s) 856
NlaIII CATG 8 cut(s) 74, 199, 502, 523, 541, 844, 895, 1048
NlaIV GGNNCC 3 cut(s) 564, 662, 778
NmuCI GTSAC 4 cut(s) 13, 671, 733, 821
NspI RCATGY 2 cut(s) 541, 1048
PaeR7I CTCGAG 1 cut(s) 763
PciI ACATGT 1 cut(s) 1044
PcsI WCGNNNNNNNCGW 1 cut(s) 672
PdiI GCCGGC 1 cut(s) 858
PkrI GCNGC 2 cut(s) 527, 653
PleI GAGTC 4 cut(s) 350, 816, 828, 862
PpsI GAGTC 4 cut(s) 350, 816, 828, 862
PscI ACATGT 1 cut(s) 1044
PshAI GACNNNNGTC 1 cut(s) 749
Psp124BI GAGCTC 2 cut(s) 513, 945
Psp1406I AACGTT 1 cut(s) 50
Psp6I CCWGG 1 cut(s) 656
PspFI CCCAGC 1 cut(s) 546
PspGI CCWGG 1 cut(s) 656
PspN4I GGNNCC 3 cut(s) 564, 662, 778
PspPI GGNCC 6 cut(s) 31, 129, 523, 562, 751, 814
PstNI CAGNNNCTG 1 cut(s) 811
RsaI GTAC 4 cut(s) 158, 171, 778, 962
RsaNI GTAC 4 cut(s) 157, 170, 777, 961
SacI GAGCTC 2 cut(s) 513, 945
SaqAI TTAA 6 cut(s) 53, 239, 726, 990, 1071, 1120
SatI GCNGC 2 cut(s) 526, 652
Sau3AI GATC 2 cut(s) 73, 115
Sau96I GGNCC 6 cut(s) 31, 129, 523, 562, 751, 814
ScaI AGTACT 2 cut(s) 158, 962
SchI GAGTC 4 cut(s) 350, 817, 829, 862
ScrFI CCNGG 1 cut(s) 658
SduI GDGCHC 4 cut(s) 486, 513, 945, 1020
SfaNI GCATC 4 cut(s) 372, 513, 537, 1080
SfcI CTRYAG 1 cut(s) 21
Sfr274I CTCGAG 1 cut(s) 763
SgrAI CRCCGGYG 1 cut(s) 856
SinI GGWCC 3 cut(s) 31, 562, 751
SlaI CTCGAG 1 cut(s) 763
SmlI CTYRAG 4 cut(s) 228, 763, 944, 1111
SmoI CTYRAG 4 cut(s) 228, 763, 944, 1111
Sse9I AATT 3 cut(s) 80, 298, 886
SsiI CCGC 9 cut(s) 373, 448, 516, 526, 634, 649, 696, 827, 956
SspMI CTAG 3 cut(s) 183, 719, 996
SstI GAGCTC 2 cut(s) 513, 945
StyD4I CCNGG 1 cut(s) 656
StyI CCWWGG 5 cut(s) 132, 498, 519, 699, 995
TaaI ACNGT 2 cut(s) 559, 751
TaiI ACGT 5 cut(s) 53, 94, 411, 678, 740
TaqI TCGA 7 cut(s) 393, 480, 507, 534, 591, 764, 903
TasI AATT 3 cut(s) 80, 298, 886
TatI WGTACW 2 cut(s) 156, 960
TauI GCSGC 1 cut(s) 528
Tru1I TTAA 6 cut(s) 53, 239, 726, 990, 1071, 1120
Tru9I TTAA 6 cut(s) 53, 239, 726, 990, 1071, 1120
TscAI CASTG 1 cut(s) 491
TseFI GTSAC 4 cut(s) 13, 671, 733, 821
TseI GCWGC 1 cut(s) 651
Tsp45I GTSAC 4 cut(s) 13, 671, 733, 821
TspDTI ATGAA 2 cut(s) 880, 938
TspGWI ACGGA 3 cut(s) 457, 466, 1023
TspRI CASTG 1 cut(s) 491
VpaK11BI GGWCC 3 cut(s) 31, 562, 751
XapI RAATTY 1 cut(s) 80
XceI RCATGY 2 cut(s) 541, 1048
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XhoI CTCGAG 1 cut(s) 763
XmaJI CCTAGG 1 cut(s) 995
XspI CTAG 3 cut(s) 183, 719, 996
ZraI GACGTC 1 cut(s) 676
ZrmI AGTACT 2 cut(s) 158, 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.