RING-H2 finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g34840 |
| malus_domestica | MD13G1089200.v1.1 MD16G1089400.v1.1 |
| prunus_persica | Prupe.1G256600_v2.0.a1 |
| pyrus_communis | pycom16g07650 |
| rosa_chinensis | RchiOBHm_Chr4g0444181 |
| rosa_laevigata | RLG00000005849 |
| rosa_multiflora | Rmu_sc0001001.1_g000021 Rmu_sc0017354.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00384770 |
| rosa_rugosa | Rorug04G0350700 |
| rosa_samantha | Rh4AG411500 Rh4BG422900 Rh4CG437200 Rh4DG418200 |
| rosa_wichuraiana | Rw4G035350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 325 |
| AclWI | GGATC | 1 cut(s) | 319 |
| AcsI | RAATTY | 2 cut(s) | 427, 524 |
| AfaI | GTAC | 1 cut(s) | 208 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 325, 518 |
| AgsI | TTSAA | 2 cut(s) | 167, 347 |
| AhlI | ACTAGT | 1 cut(s) | 269 |
| AjnI | CCWGG | 1 cut(s) | 43 |
| AluBI | AGCT | 4 cut(s) | 19, 332, 483, 569 |
| AluI | AGCT | 4 cut(s) | 19, 332, 483, 569 |
| Alw26I | GTCTC | 2 cut(s) | 181, 260 |
| AlwI | GGATC | 1 cut(s) | 319 |
| AoxI | GGCC | 2 cut(s) | 359, 509 |
| ApeKI | GCWGC | 1 cut(s) | 554 |
| ApoI | RAATTY | 2 cut(s) | 427, 524 |
| AspS9I | GGNCC | 1 cut(s) | 360 |
| AsuC2I | CCSGG | 1 cut(s) | 65 |
| AsuHPI | GGTGA | 2 cut(s) | 395, 488 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 196, 228 |
| BbvCI | CCTCAGC | 2 cut(s) | 20, 565 |
| BbvI | GCAGC | 1 cut(s) | 541 |
| BciT130I | CCWGG | 1 cut(s) | 45 |
| BciVI | GTATCC | 1 cut(s) | 601 |
| BcnI | CCSGG | 1 cut(s) | 65 |
| BcoDI | GTCTC | 2 cut(s) | 181, 260 |
| BcuI | ACTAGT | 1 cut(s) | 269 |
| BfaI | CTAG | 1 cut(s) | 270 |
| BfmI | CTRYAG | 2 cut(s) | 150, 537 |
| BfuI | GTATCC | 1 cut(s) | 601 |
| BglII | AGATCT | 1 cut(s) | 599 |
| BisI | GCNGC | 1 cut(s) | 555 |
| BlsI | GCNGC | 1 cut(s) | 556 |
| BmcAI | AGTACT | 1 cut(s) | 208 |
| Bme1390I | CCNGG | 2 cut(s) | 45, 65 |
| BmgT120I | GGNCC | 1 cut(s) | 360 |
| BmrFI | CCNGG | 2 cut(s) | 45, 65 |
| BmsI | GCATC | 1 cut(s) | 277 |
| BoxI | GACNNNNGTC | 1 cut(s) | 221 |
| Bpu10I | CCTNAGC | 2 cut(s) | 20, 565 |
| BpuMI | CCSGG | 1 cut(s) | 65 |
| BsaJI | CCNNGG | 3 cut(s) | 44, 573, 584 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 325, 518 |
| BseBI | CCWGG | 1 cut(s) | 45 |
| BseDI | CCNNGG | 3 cut(s) | 44, 573, 584 |
| BseGI | GGATG | 1 cut(s) | 292 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 325, 518 |
| BseMII | CTCAG | 4 cut(s) | 11, 347, 441, 579 |
| BseXI | GCAGC | 1 cut(s) | 541 |
| BshFI | GGCC | 2 cut(s) | 361, 511 |
| BsiSI | CCGG | 1 cut(s) | 65 |
| BslFI | GGGAC | 1 cut(s) | 43 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 325, 518 |
| BsmAI | GTCTC | 2 cut(s) | 181, 260 |
| BsmFI | GGGAC | 1 cut(s) | 43 |
| BsnI | GGCC | 2 cut(s) | 361, 511 |
| Bsp143I | GATC | 3 cut(s) | 311, 368, 599 |
| Bsp19I | CCATGG | 1 cut(s) | 584 |
| BspANI | GGCC | 2 cut(s) | 361, 511 |
| BspCNI | CTCAG | 4 cut(s) | 12, 348, 442, 578 |
| BspMAI | CTGCAG | 2 cut(s) | 154, 541 |
| BspPI | GGATC | 1 cut(s) | 319 |
| BssECI | CCNNGG | 3 cut(s) | 44, 573, 584 |
| BssMI | GATC | 3 cut(s) | 311, 368, 599 |
| BssT1I | CCWWGG | 1 cut(s) | 584 |
| Bst2UI | CCWGG | 1 cut(s) | 45 |
| Bst4CI | ACNGT | 1 cut(s) | 574 |
| Bst6I | CTCTTC | 2 cut(s) | 87, 235 |
| BstDEI | CTNAG | 5 cut(s) | 20, 356, 450, 565, 603 |
| BstDSI | CCRYGG | 2 cut(s) | 573, 584 |
| BstF5I | GGATG | 1 cut(s) | 292 |
| BstKTI | GATC | 3 cut(s) | 314, 371, 602 |
| BstMAI | GTCTC | 2 cut(s) | 181, 260 |
| BstMBI | GATC | 3 cut(s) | 311, 368, 599 |
| BstNI | CCWGG | 1 cut(s) | 45 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 221 |
| BstSCI | CCNGG | 2 cut(s) | 43, 63 |
| BstSFI | CTRYAG | 2 cut(s) | 150, 537 |
| BstV1I | GCAGC | 1 cut(s) | 541 |
| BstX2I | RGATCY | 1 cut(s) | 599 |
| BstYI | RGATCY | 1 cut(s) | 599 |
| BsuI | GTATCC | 1 cut(s) | 601 |
| BsuRI | GGCC | 2 cut(s) | 361, 511 |
| BtgI | CCRYGG | 2 cut(s) | 573, 584 |
| BtsCI | GGATG | 1 cut(s) | 292 |
| Cfr13I | GGNCC | 1 cut(s) | 360 |
| Csp6I | GTAC | 1 cut(s) | 207 |
| CviAII | CATG | 2 cut(s) | 585, 612 |
| CviJI | RGCY | 9 cut(s) | 19, 53, 332, 361, 483, 505, 511, 554, 569 |
| CviKI_1 | RGCY | 9 cut(s) | 19, 53, 332, 361, 483, 505, 511, 554, 569 |
| CviQI | GTAC | 1 cut(s) | 207 |
| DdeI | CTNAG | 5 cut(s) | 20, 356, 450, 565, 603 |
| DpnI | GATC | 3 cut(s) | 313, 370, 601 |
| DpnII | GATC | 3 cut(s) | 311, 368, 599 |
| Eam1104I | CTCTTC | 2 cut(s) | 87, 235 |
| EarI | CTCTTC | 2 cut(s) | 87, 235 |
| Eco130I | CCWWGG | 1 cut(s) | 584 |
| EcoRI | GAATTC | 1 cut(s) | 427 |
| EcoRII | CCWGG | 1 cut(s) | 43 |
| EcoT14I | CCWWGG | 1 cut(s) | 584 |
| ErhI | CCWWGG | 1 cut(s) | 584 |
| FaeI | CATG | 2 cut(s) | 588, 615 |
| FaiI | YATR | 6 cut(s) | 37, 316, 324, 392, 586, 613 |
| FaqI | GGGAC | 1 cut(s) | 43 |
| FatI | CATG | 2 cut(s) | 584, 611 |
| Fnu4HI | GCNGC | 1 cut(s) | 555 |
| FokI | GGATG | 1 cut(s) | 299 |
| Fsp4HI | GCNGC | 1 cut(s) | 555 |
| FspBI | CTAG | 1 cut(s) | 270 |
| GluI | GCNGC | 1 cut(s) | 555 |
| HaeIII | GGCC | 2 cut(s) | 361, 511 |
| HapII | CCGG | 1 cut(s) | 65 |
| Hin1II | CATG | 2 cut(s) | 588, 615 |
| HindIII | AAGCTT | 1 cut(s) | 481 |
| HinfI | GANTC | 1 cut(s) | 83 |
| HpaII | CCGG | 1 cut(s) | 65 |
| HphI | GGTGA | 2 cut(s) | 395, 488 |
| Hpy188I | TCNGA | 3 cut(s) | 132, 203, 357 |
| Hpy188III | TCNNGA | 2 cut(s) | 14, 605 |
| HpyAV | CCTTC | 3 cut(s) | 92, 221, 230 |
| HpyCH4III | ACNGT | 1 cut(s) | 574 |
| HpyCH4V | TGCA | 3 cut(s) | 152, 290, 539 |
| HpyF3I | CTNAG | 5 cut(s) | 20, 356, 450, 565, 603 |
| Hsp92II | CATG | 2 cut(s) | 588, 615 |
| Kzo9I | GATC | 3 cut(s) | 311, 368, 599 |
| LpnPI | CCDG | 8 cut(s) | 30, 57, 78, 93, 123, 357, 487, 590 |
| Lsp1109I | GCAGC | 1 cut(s) | 541 |
| LweI | GCATC | 1 cut(s) | 277 |
| MaeI | CTAG | 1 cut(s) | 270 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 3 cut(s) | 313, 370, 601 |
| MboI | GATC | 3 cut(s) | 311, 368, 599 |
| MboII | GAAGA | 2 cut(s) | 104, 252 |
| MflI | RGATCY | 1 cut(s) | 599 |
| MluCI | AATT | 4 cut(s) | 280, 427, 462, 524 |
| MmeI | TCCRAC | 1 cut(s) | 456 |
| MspI | CCGG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 2 cut(s) | 45, 65 |
| MvaI | CCWGG | 1 cut(s) | 45 |
| NciI | CCSGG | 1 cut(s) | 65 |
| NcoI | CCATGG | 1 cut(s) | 584 |
| NdeII | GATC | 3 cut(s) | 311, 368, 599 |
| NlaIII | CATG | 2 cut(s) | 588, 615 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 325 |
| PkrI | GCNGC | 1 cut(s) | 556 |
| PshAI | GACNNNNGTC | 1 cut(s) | 221 |
| Psp6I | CCWGG | 1 cut(s) | 43 |
| PspGI | CCWGG | 1 cut(s) | 43 |
| PspPI | GGNCC | 1 cut(s) | 360 |
| PstI | CTGCAG | 2 cut(s) | 154, 541 |
| PsuI | RGATCY | 1 cut(s) | 599 |
| RsaI | GTAC | 1 cut(s) | 208 |
| RsaNI | GTAC | 1 cut(s) | 207 |
| SatI | GCNGC | 1 cut(s) | 555 |
| Sau3AI | GATC | 3 cut(s) | 311, 368, 599 |
| Sau96I | GGNCC | 1 cut(s) | 360 |
| ScaI | AGTACT | 1 cut(s) | 208 |
| ScrFI | CCNGG | 2 cut(s) | 45, 65 |
| SfaNI | GCATC | 1 cut(s) | 277 |
| SfcI | CTRYAG | 2 cut(s) | 150, 537 |
| SpeI | ACTAGT | 1 cut(s) | 269 |
| Sse9I | AATT | 4 cut(s) | 280, 427, 462, 524 |
| SspMI | CTAG | 1 cut(s) | 270 |
| StyD4I | CCNGG | 2 cut(s) | 43, 63 |
| StyI | CCWWGG | 1 cut(s) | 584 |
| TaaI | ACNGT | 1 cut(s) | 574 |
| TaqI | TCGA | 4 cut(s) | 13, 78, 86, 225 |
| TasI | AATT | 4 cut(s) | 280, 427, 462, 524 |
| TatI | WGTACW | 1 cut(s) | 206 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| TseI | GCWGC | 1 cut(s) | 554 |
| TspDTI | ATGAA | 1 cut(s) | 249 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 325 |
| XapI | RAATTY | 2 cut(s) | 427, 524 |
| XspI | CTAG | 1 cut(s) | 270 |
| ZrmI | AGTACT | 1 cut(s) | 208 |