Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003812

Physical Location & Seq

Genomic Coordinates Forward (+)

65993332 .. 65997374

Gene Structure 4043 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41316

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGGTTCTCATGAGGACGGGAGATCGCTATTGGAAGATGGCCTTCTTCAGGATGAAGGCGAGGGATTGTACACAGGAGACGGCTCAGTCGACATTAAGGGAAATCCTGTTCTAAAGAAAAATACTGGAAACTGGAGAGCTTGCCCTTTCATTCTAGGTACCGAATGTTGTGAACGCTTGGCCTACTATGGGATTGCCACTAACCTGGTTACTTATCTTACAAGCAAATTGCACGAAGGAAATGTTGCTGCTGCAAGAAATGTTACCACTTGGCAGGGCACTTGCTATCTTACACCACTCATTGGGGCTGTCTTAGCAGATGCATACTGGGGAAGATACTGGACAATTGCTGTTTTTTCCACCATCTACTTTCTCGGAATGTGTACTTTGACTCTCTCGGCAACACTTCCTTCATTGATTCCAACTGAATGTGTTGGTTCAGTATGCCCTGCAGCTAGTACGTCACAGTATGCAGTGTTCTTCTTGGGGCTCTATCTGATTGCTCTAGGAACTGGTGGAATCAAGCCATGTGTTTCATCCTTTGGGGCGGATCAGTTTGATGATACTGATTCCAGGGAAAGGGTAAAGAAGGGATCTTTCTTCAACTGGTTTTACTTTTCTATCAACATTGGAGCTCTGATATCAAGTAGCTTTATAGTGTATATTCAAGACAATGCTGGATGGGGCCTAGGATTTGGTATTCCTGCATTGTTTATGGCTGTTGCTATTATTAGTTTCTTTTCAGGCACACCACTCTATAGATTTCAGAGACCAGGGGGAAGCCCTCTGACAAGAATGTGCCAGGTTTTGGTTGCCTCATTTCGTAAGCGGAGTGTGAATGTCCCTGAAGACAGTAGTCTCCTGTATGAGACACAAGATAAAATCTCCGCCATTGAAGGAAGTCGTAAACTGGAGCACAGTGATGAGTTCAAATGTCTTGATAAAGCTGCTGTGATATCAGAAGCAGAGGTCAAAACTGGGGAATTCTCCAATCTATGGAGGCTTTGCACTGTTACACAGGTGGAGGAATTCAAAATTTTAATCCGCATGTTCCCTATCTGGGCTACTGGAATTGTGTTTTCTGCTGTCTATGCCCAAATGTCAACTATGTTTGTGGAACAAGGGACGATGATGGATACATCTATTGGTTCTTTCACCATTCCCCCAGCCTCCCTCTCAACTTTTGATGTCATCAGTGTTATCTTCTGGGTCCCAATTTATGACAGGTTTATTGTCCCAATTGCGAGGAGATTTACTGGTAAAGAAAGGGGGTTCTCAGAGTTGCAAAGGATGGGCATTGGTCTCTTTCTTTCGGTCCTATGCATGTCAGCTGCTGCTGTGGTAGAGATTTATCGATTGCAGATTGCTAAAGAACTTGATTTGGTTGACAAAGATGTAGCTGTACCACTTAGTATCTTTTGGCAAATTCCTCAATACTTCTTGTTGGGCGCTGCAGAGATTTTCACATTCATTGGGCAACTCGAGTTCTTCTACGACCAATCTCCAGATGCCATGCGCAGTTTATGCAGCGCCTTATCACTTCTGACCACTGCACTGGGCAATTATCTGAGCTCTTTCATTCTGACGGTAGTAACTTACTTGACAACACAAGGTGGGAGTTCTGGATGGATCCCTGACAACTTGAATTCAGGTCATCTGGATTATTTCTTCTGGCTCTTAGCAGGACTCAGCTTTATAAACATGGTGGTGTACATGGTCTGCGCCAGGAAATATAAACAGAAGAAGGCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006857 GO:0008150 GO:0009705 GO:0012505 GO:0015334 GO:0015833 GO:0016020 GO:0022857 GO:0031090 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098588 GO:0098805 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

584

Amino Acids

64.58

Weight (kDa)

5.38

Isoelectric Point (pI)

31.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	56 - 520	1.1e-09	Major Facilitator Superfamily
PTR2	PF00854	113 - 544	2.1e-136	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62200 AT1G62200 AT1G62200 AT2G02040
fragaria_vesca	FvH4_3g15070 FvH4_4g35940 FvH4_4g35941
malus_domestica	MD13G1013700.v1.1 MD16G1010600.v1.1 MD16G1010700.v1.1
prunus_persica	Prupe.1G340000_v2.0.a1 Prupe.1G340000_v2.0.a1 Prupe.1G340000_v2.0.a1 Prupe.1G340100_v2.0.a1 Prupe.1G340100_v2.0.a1
pyrus_communis	pycom13g01150 pycom16g01030 pycom16g01040
rosa_chinensis	RchiOBHm_Chr4g0445571 RchiOBHm_Chr4g0445581
rosa_laevigata	RLG00000005729
rosa_multiflora	Rmu_ssc0000253.1_g000010 Rmu_ssc0000253.1_g000011
rosa_roxburghii	Rroxscaffold_5G00386040 Rroxscaffold_5G00386050
rosa_rugosa	Rorug04G0362600 Rorug04G0362600
rosa_samantha	Rh4AG424000 Rh4BG436000 Rh4BG436100 Rh4CG450700 Rh4DG432500
rosa_wichuraiana	Rw4G036340 Rw4G036350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1697
AasI	GACNNNNNNGTC	1 cut(s)	86
Acc16I	TGCGCA	1 cut(s)	1517
Acc65I	GGTACC	1 cut(s)	158
AccB1I	GGYRCC	1 cut(s)	158
AccB7I	CCANNNNNTGG	3 cut(s)	302, 808, 996
AccI	GTMKAC	1 cut(s)	90
AciI	CCGC	4 cut(s)	548, 829, 888, 1045
AclWI	GGATC	4 cut(s)	558, 601, 1624, 1637
AcsI	RAATTY	5 cut(s)	983, 1028, 1035, 1425, 1645
AcuI	CTGAAG	2 cut(s)	32, 867
AdeI	CACNNNGTG	1 cut(s)	1613
AfaI	GTAC	6 cut(s)	71, 160, 385, 460, 1404, 1712
AfiI	CCNNNNNNNGG	7 cut(s)	49, 189, 302, 579, 808, 996, 1060
AgsI	TTSAA	6 cut(s)	604, 668, 896, 931, 1033, 1645
AjnI	CCWGG	5 cut(s)	204, 572, 772, 801, 1724
AloI	GAACNNNNNNTCC	2 cut(s)	93, 125
AluBI	AGCT	9 cut(s)	140, 455, 635, 651, 947, 1331, 1400, 1572, 1692
AluI	AGCT	9 cut(s)	140, 455, 635, 651, 947, 1331, 1400, 1572, 1692
Alw21I	GWGCWC	3 cut(s)	637, 918, 1574
Alw26I	GTCTC	5 cut(s)	72, 763, 863, 863, 1307
AlwI	GGATC	4 cut(s)	558, 601, 1624, 1637
AlwNI	CAGNNNCTG	1 cut(s)	1334
Ama87I	CYCGRG	1 cut(s)	1481
AoxI	GGCC	3 cut(s)	40, 180, 685
ApeKI	GCWGC	8 cut(s)	248, 251, 452, 947, 1331, 1334, 1451, 1527
ApoI	RAATTY	5 cut(s)	983, 1028, 1035, 1425, 1645
Asp718I	GGTACC	1 cut(s)	158
AspA2I	CCTAGG	1 cut(s)	688
AspLEI	GCGC	4 cut(s)	1451, 1518, 1532, 1724
AspS9I	GGNCC	3 cut(s)	685, 1210, 1315
AsuHPI	GGTGA	1 cut(s)	1147
AvaI	CYCGRG	1 cut(s)	1481
AvaII	GGWCC	2 cut(s)	1210, 1315
AvrII	CCTAGG	1 cut(s)	688
BaeGI	GKGCMC	1 cut(s)	281
BamHI	GGATCC	1 cut(s)	1629
BanI	GGYRCC	1 cut(s)	158
BanII	GRGCYC	3 cut(s)	492, 637, 1574
BbsI	GAAGAC	1 cut(s)	855
Bbv12I	GWGCWC	3 cut(s)	637, 918, 1574
BbvI	GCAGC	8 cut(s)	235, 238, 464, 934, 1318, 1321, 1438, 1539
BccI	CCATC	6 cut(s)	32, 371, 675, 1126, 1285, 1620
BceAI	ACGGC	1 cut(s)	97
BciT130I	CCWGG	5 cut(s)	206, 574, 774, 803, 1726
BciVI	GTATCC	1 cut(s)	1129
BcoDI	GTCTC	5 cut(s)	72, 763, 863, 863, 1307
BfaI	CTAG	4 cut(s)	155, 456, 506, 689
BfmI	CTRYAG	3 cut(s)	450, 757, 1452
BfoI	RGCGCY	2 cut(s)	1452, 1533
BfuI	GTATCC	1 cut(s)	1129
BisI	GCNGC	8 cut(s)	249, 252, 453, 948, 1332, 1335, 1452, 1528
BlnI	CCTAGG	1 cut(s)	688
BlsI	GCNGC	8 cut(s)	250, 253, 454, 949, 1333, 1336, 1453, 1529
Bme1390I	CCNGG	5 cut(s)	206, 574, 774, 803, 1726
Bme18I	GGWCC	2 cut(s)	1210, 1315
BmeT110I	CYCGRG	1 cut(s)	1481
BmgT120I	GGNCC	3 cut(s)	685, 1210, 1315
BmiI	GGNNCC	5 cut(s)	160, 686, 1211, 1212, 1631
BmrFI	CCNGG	5 cut(s)	206, 574, 774, 803, 1726
BmrI	ACTGGG	3 cut(s)	337, 987, 1565
BmsI	GCATC	2 cut(s)	310, 1498
BmuI	ACTGGG	3 cut(s)	337, 987, 1565
BoxI	GACNNNNGTC	1 cut(s)	855
BpiI	GAAGAC	1 cut(s)	855
BpmI	CTGGAG	3 cut(s)	154, 932, 1488
Bsa29I	ATCGAT	1 cut(s)	1354
BsaI	GGTCTC	2 cut(s)	763, 1307
BsaJI	CCNNGG	3 cut(s)	573, 688, 773
Bsc4I	CCNNNNNNNGG	7 cut(s)	49, 189, 302, 579, 808, 996, 1060
BseBI	CCWGG	5 cut(s)	206, 574, 774, 803, 1726
BseCI	ATCGAT	1 cut(s)	1354
BseDI	CCNNGG	3 cut(s)	573, 688, 773
BseGI	GGATG	5 cut(s)	58, 536, 686, 1296, 1631
BseLI	CCNNNNNNNGG	7 cut(s)	49, 189, 302, 579, 808, 996, 1060
BseMII	CTCAG	4 cut(s)	99, 1290, 1559, 1702
BseRI	GAGGAG	1 cut(s)	1261
BseSI	GKGCMC	1 cut(s)	281
BseXI	GCAGC	8 cut(s)	235, 238, 464, 934, 1318, 1321, 1438, 1539
BseYI	CCCAGC	1 cut(s)	1165
BsgI	GTGCAG	1 cut(s)	1536
BshFI	GGCC	3 cut(s)	42, 182, 687
BshNI	GGYRCC	1 cut(s)	158
BshVI	ATCGAT	1 cut(s)	1354
BsiHKAI	GWGCWC	3 cut(s)	637, 918, 1574
BsiHKCI	CYCGRG	1 cut(s)	1481
BslFI	GGGAC	4 cut(s)	827, 1138, 1196, 1220
BslI	CCNNNNNNNGG	7 cut(s)	49, 189, 302, 579, 808, 996, 1060
BsmAI	GTCTC	5 cut(s)	72, 763, 863, 863, 1307
BsmBI	CGTCTC	1 cut(s)	72
BsmFI	GGGAC	4 cut(s)	827, 1138, 1196, 1220
BsnI	GGCC	3 cut(s)	42, 182, 687
Bso31I	GGTCTC	2 cut(s)	763, 1307
BsoBI	CYCGRG	1 cut(s)	1481
Bsp1286I	GDGCHC	5 cut(s)	281, 492, 637, 918, 1574
Bsp1407I	TGTACA	2 cut(s)	69, 1710
Bsp143I	GATC	4 cut(s)	23, 550, 593, 1629
BspACI	CCGC	4 cut(s)	548, 829, 888, 1045
BspANI	GGCC	3 cut(s)	42, 182, 687
BspCNI	CTCAG	4 cut(s)	98, 1289, 1560, 1701
BspDI	ATCGAT	1 cut(s)	1354
BspHI	TCATGA	1 cut(s)	10
BspLI	GGNNCC	5 cut(s)	160, 686, 1211, 1212, 1631
BspMAI	CTGCAG	2 cut(s)	454, 1456
BspPI	GGATC	4 cut(s)	558, 601, 1624, 1637
BspT107I	GGYRCC	1 cut(s)	158
BspTNI	GGTCTC	2 cut(s)	763, 1307
BsrGI	TGTACA	2 cut(s)	69, 1710
BssECI	CCNNGG	3 cut(s)	573, 688, 773
BssMI	GATC	4 cut(s)	23, 550, 593, 1629
BssT1I	CCWWGG	1 cut(s)	688
Bst2UI	CCWGG	5 cut(s)	206, 574, 774, 803, 1726
Bst4CI	ACNGT	5 cut(s)	468, 854, 920, 1012, 1588
BstAPI	GCANNNNNTGC	1 cut(s)	1524
BstAUI	TGTACA	2 cut(s)	69, 1710
BstC8I	GCNNGC	1 cut(s)	142
BstDEI	CTNAG	7 cut(s)	85, 313, 1276, 1409, 1568, 1678, 1688
BstENI	CCTNNNNNAGG	1 cut(s)	47
BstF5I	GGATG	5 cut(s)	58, 536, 686, 1296, 1631
BstH2I	RGCGCY	2 cut(s)	1452, 1533
BstHHI	GCGC	4 cut(s)	1451, 1518, 1532, 1724
BstKTI	GATC	4 cut(s)	26, 553, 596, 1632
BstMAI	GTCTC	5 cut(s)	72, 763, 863, 863, 1307
BstMBI	GATC	4 cut(s)	23, 550, 593, 1629
BstMWI	GCNNNNNNNGC	3 cut(s)	314, 1091, 1524
BstNI	CCWGG	5 cut(s)	206, 574, 774, 803, 1726
BstNSI	RCATGY	2 cut(s)	1051, 1327
BstPAI	GACNNNNGTC	1 cut(s)	855
BstSCI	CCNGG	5 cut(s)	204, 572, 772, 801, 1724
BstSFI	CTRYAG	3 cut(s)	450, 757, 1452
BstSLI	GKGCMC	1 cut(s)	281
BstV1I	GCAGC	8 cut(s)	235, 238, 464, 934, 1318, 1321, 1438, 1539
BstV2I	GAAGAC	1 cut(s)	855
BstX2I	RGATCY	2 cut(s)	593, 1629
BstXI	CCANNNNNNTGG	2 cut(s)	205, 1555
BstYI	RGATCY	2 cut(s)	593, 1629
Bsu15I	ATCGAT	1 cut(s)	1354
BsuI	GTATCC	1 cut(s)	1129
BsuRI	GGCC	3 cut(s)	42, 182, 687
BsuTUI	ATCGAT	1 cut(s)	1354
BtsCI	GGATG	5 cut(s)	58, 536, 686, 1296, 1631
BtsI	GCAGTG	2 cut(s)	480, 1548
BtsIMutI	CAGTG	6 cut(s)	480, 925, 1008, 1201, 1548, 1553
Cac8I	GCNNGC	1 cut(s)	142
CaiI	CAGNNNCTG	1 cut(s)	1334
CciI	TCATGA	1 cut(s)	10
CfoI	GCGC	4 cut(s)	1451, 1518, 1532, 1724
Cfr13I	GGNCC	3 cut(s)	685, 1210, 1315
ClaI	ATCGAT	1 cut(s)	1354
CsiI	ACCWGGT	1 cut(s)	204
Csp6I	GTAC	6 cut(s)	70, 159, 384, 459, 1403, 1711
CviAII	CATG	7 cut(s)	11, 528, 1048, 1324, 1513, 1702, 1714
CviQI	GTAC	6 cut(s)	70, 159, 384, 459, 1403, 1711
DdeI	CTNAG	7 cut(s)	85, 313, 1276, 1409, 1568, 1678, 1688
DpnI	GATC	4 cut(s)	25, 552, 595, 1631
DpnII	GATC	4 cut(s)	23, 550, 593, 1629
DraIII	CACNNNGTG	1 cut(s)	1613
DrdI	GACNNNNNNGTC	1 cut(s)	86
DseDI	GACNNNNNNGTC	1 cut(s)	86
EciI	GGCGGA	2 cut(s)	563, 877
Ecl136II	GAGCTC	2 cut(s)	635, 1572
Eco130I	CCWWGG	1 cut(s)	688
Eco24I	GRGCYC	3 cut(s)	492, 637, 1574
Eco31I	GGTCTC	2 cut(s)	763, 1307
Eco32I	GATATC	2 cut(s)	642, 957
Eco47I	GGWCC	2 cut(s)	1210, 1315
Eco53kI	GAGCTC	2 cut(s)	635, 1572
Eco57I	CTGAAG	2 cut(s)	32, 867
Eco88I	CYCGRG	1 cut(s)	1481
EcoICRI	GAGCTC	2 cut(s)	635, 1572
EcoNI	CCTNNNNNAGG	1 cut(s)	47
EcoO109I	RGGNCCY	2 cut(s)	685, 1210
EcoRI	GAATTC	3 cut(s)	983, 1028, 1645
EcoRII	CCWGG	5 cut(s)	204, 572, 772, 801, 1724
EcoRV	GATATC	2 cut(s)	642, 957
EcoT14I	CCWWGG	1 cut(s)	688
EcoT22I	ATGCAT	2 cut(s)	325, 1325
EcoT38I	GRGCYC	3 cut(s)	492, 637, 1574
ErhI	CCWWGG	1 cut(s)	688
Esp3I	CGTCTC	1 cut(s)	72
FaeI	CATG	7 cut(s)	14, 531, 1051, 1327, 1516, 1705, 1717
FalI	AAGNNNNNCTT	2 cut(s)	27, 59
FaqI	GGGAC	4 cut(s)	827, 1138, 1196, 1220
FatI	CATG	7 cut(s)	10, 527, 1047, 1323, 1512, 1701, 1713
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	8 cut(s)	249, 252, 453, 948, 1332, 1335, 1452, 1528
FokI	GGATG	5 cut(s)	65, 523, 693, 1303, 1638
FriOI	GRGCYC	3 cut(s)	492, 637, 1574
Fsp4HI	GCNGC	8 cut(s)	249, 252, 453, 948, 1332, 1335, 1452, 1528
FspBI	CTAG	4 cut(s)	155, 456, 506, 689
FspI	TGCGCA	1 cut(s)	1517
GlaI	GCGC	4 cut(s)	1450, 1517, 1531, 1723
GluI	GCNGC	8 cut(s)	249, 252, 453, 948, 1332, 1335, 1452, 1528
GsaI	CCCAGC	1 cut(s)	1169
GsuI	CTGGAG	3 cut(s)	154, 932, 1488
HaeII	RGCGCY	2 cut(s)	1452, 1533
HaeIII	GGCC	3 cut(s)	42, 182, 687
HhaI	GCGC	4 cut(s)	1451, 1518, 1532, 1724
Hin1II	CATG	7 cut(s)	14, 531, 1051, 1327, 1516, 1705, 1717
Hin6I	GCGC	4 cut(s)	1449, 1516, 1530, 1722
HinP1I	GCGC	4 cut(s)	1449, 1516, 1530, 1722
HincII	GTYRAC	3 cut(s)	91, 1104, 1387
HindII	GTYRAC	3 cut(s)	91, 1104, 1387
HinfI	GANTC	5 cut(s)	391, 418, 519, 569, 1686
HphI	GGTGA	1 cut(s)	1147
Hpy166II	GTNNAC	8 cut(s)	72, 91, 173, 384, 908, 1104, 1387, 1711
Hpy188III	TCNNGA	7 cut(s)	11, 50, 668, 938, 1505, 1623, 1658
Hpy8I	GTNNAC	8 cut(s)	72, 91, 173, 384, 908, 1104, 1387, 1711
HpyAV	CCTTC	7 cut(s)	50, 53, 230, 420, 583, 890, 1738
HpyCH4III	ACNGT	5 cut(s)	468, 854, 920, 1012, 1588
HpyCH4IV	ACGT	1 cut(s)	461
HpyF10VI	GCNNNNNNNGC	3 cut(s)	314, 1091, 1524
HpyF3I	CTNAG	7 cut(s)	85, 313, 1276, 1409, 1568, 1678, 1688
HpySE526I	ACGT	1 cut(s)	461
Hsp92II	CATG	7 cut(s)	14, 531, 1051, 1327, 1516, 1705, 1717
HspAI	GCGC	4 cut(s)	1449, 1516, 1530, 1722
KflI	GGGWCCC	1 cut(s)	1210
KpnI	GGTACC	1 cut(s)	162
Kzo9I	GATC	4 cut(s)	23, 550, 593, 1629
LmnI	GCTCC	2 cut(s)	632, 913
Lsp1109I	GCAGC	8 cut(s)	235, 238, 464, 934, 1318, 1321, 1438, 1539
LweI	GCATC	2 cut(s)	310, 1498
MabI	ACCWGGT	1 cut(s)	204
MaeI	CTAG	4 cut(s)	155, 456, 506, 689
MaeII	ACGT	1 cut(s)	461
MaeIII	GTNAC	5 cut(s)	208, 262, 462, 1012, 1591
MalI	GATC	4 cut(s)	25, 552, 595, 1631
MboI	GATC	4 cut(s)	23, 550, 593, 1629
MfeI	CAATTG	2 cut(s)	345, 1239
MflI	RGATCY	2 cut(s)	593, 1629
MhlI	GDGCHC	5 cut(s)	281, 492, 637, 918, 1574
MlyI	GAGTC	2 cut(s)	385, 1680
MmeI	TCCRAC	1 cut(s)	446
Mph1103I	ATGCAT	2 cut(s)	325, 1325
MseI	TTAA	3 cut(s)	96, 1040, 1753
MslI	CAYNNNNRTG	2 cut(s)	921, 1706
MspA1I	CMGCKG	1 cut(s)	1331
MspR9I	CCNGG	5 cut(s)	206, 574, 774, 803, 1726
MunI	CAATTG	2 cut(s)	345, 1239
MvaI	CCWGG	5 cut(s)	206, 574, 774, 803, 1726
MwoI	GCNNNNNNNGC	3 cut(s)	314, 1091, 1524
NdeII	GATC	4 cut(s)	23, 550, 593, 1629
NlaIII	CATG	7 cut(s)	14, 531, 1051, 1327, 1516, 1705, 1717
NlaIV	GGNNCC	5 cut(s)	160, 686, 1211, 1212, 1631
NmeAIII	GCCGAG	1 cut(s)	377
NmuCI	GTSAC	1 cut(s)	462
NsbI	TGCGCA	1 cut(s)	1517
NsiI	ATGCAT	2 cut(s)	325, 1325
NspI	RCATGY	2 cut(s)	1051, 1327
PaeR7I	CTCGAG	1 cut(s)	1481
PagI	TCATGA	1 cut(s)	10
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PfeI	GAWTC	3 cut(s)	418, 519, 569
PflMI	CCANNNNNTGG	3 cut(s)	302, 808, 996
PkrI	GCNGC	8 cut(s)	250, 253, 454, 949, 1333, 1336, 1453, 1529
PleI	GAGTC	2 cut(s)	385, 1680
PpsI	GAGTC	2 cut(s)	385, 1680
PpuMI	RGGWCCY	1 cut(s)	1210
PshAI	GACNNNNGTC	1 cut(s)	855
PsiI	TTATAA	1 cut(s)	1697
Psp124BI	GAGCTC	2 cut(s)	637, 1574
Psp5II	RGGWCCY	1 cut(s)	1210
Psp6I	CCWGG	5 cut(s)	204, 572, 772, 801, 1724
PspFI	CCCAGC	1 cut(s)	1165
PspGI	CCWGG	5 cut(s)	204, 572, 772, 801, 1724
PspN4I	GGNNCC	5 cut(s)	160, 686, 1211, 1212, 1631
PspPI	GGNCC	3 cut(s)	685, 1210, 1315
PspPPI	RGGWCCY	1 cut(s)	1210
PspXI	VCTCGAGB	1 cut(s)	1481
PsrI	GAACNNNNNNTAC	2 cut(s)	461, 493
PstI	CTGCAG	2 cut(s)	454, 1456
PstNI	CAGNNNCTG	1 cut(s)	1334
PsuI	RGATCY	2 cut(s)	593, 1629
PvuII	CAGCTG	1 cut(s)	1331
RsaI	GTAC	6 cut(s)	71, 160, 385, 460, 1404, 1712
RsaNI	GTAC	6 cut(s)	70, 159, 384, 459, 1403, 1711
RseI	CAYNNNNRTG	2 cut(s)	921, 1706
SacI	GAGCTC	2 cut(s)	637, 1574
SalI	GTCGAC	1 cut(s)	89
SaqAI	TTAA	3 cut(s)	96, 1040, 1753
SatI	GCNGC	8 cut(s)	249, 252, 453, 948, 1332, 1335, 1452, 1528
Sau3AI	GATC	4 cut(s)	23, 550, 593, 1629
Sau96I	GGNCC	3 cut(s)	685, 1210, 1315
SchI	GAGTC	2 cut(s)	385, 1680
ScrFI	CCNGG	5 cut(s)	206, 574, 774, 803, 1726
SduI	GDGCHC	5 cut(s)	281, 492, 637, 918, 1574
SexAI	ACCWGGT	1 cut(s)	204
SfaNI	GCATC	2 cut(s)	310, 1498
SfcI	CTRYAG	3 cut(s)	450, 757, 1452
Sfr274I	CTCGAG	1 cut(s)	1481
SinI	GGWCC	2 cut(s)	1210, 1315
SlaI	CTCGAG	1 cut(s)	1481
SmiMI	CAYNNNNRTG	2 cut(s)	921, 1706
SmlI	CTYRAG	1 cut(s)	1481
SmoI	CTYRAG	1 cut(s)	1481
SsiI	CCGC	4 cut(s)	548, 829, 888, 1045
SspMI	CTAG	4 cut(s)	155, 456, 506, 689
SstI	GAGCTC	2 cut(s)	637, 1574
StyD4I	CCNGG	5 cut(s)	204, 572, 772, 801, 1724
StyI	CCWWGG	1 cut(s)	688
TaaI	ACNGT	5 cut(s)	468, 854, 920, 1012, 1588
TaiI	ACGT	1 cut(s)	464
TaqI	TCGA	3 cut(s)	90, 1354, 1482
TaqII	GACCGA	1 cut(s)	1303
TatI	WGTACW	3 cut(s)	69, 383, 1710
TfiI	GAWTC	3 cut(s)	418, 519, 569
Tru1I	TTAA	3 cut(s)	96, 1040, 1753
Tru9I	TTAA	3 cut(s)	96, 1040, 1753
TscAI	CASTG	6 cut(s)	480, 925, 1015, 1201, 1555, 1560
TseFI	GTSAC	1 cut(s)	462
TseI	GCWGC	8 cut(s)	248, 251, 452, 947, 1331, 1334, 1451, 1527
Tsp45I	GTSAC	1 cut(s)	462
TspDTI	ATGAA	6 cut(s)	69, 139, 402, 525, 1459, 1567
TspRI	CASTG	6 cut(s)	480, 925, 1015, 1201, 1555, 1560
Van91I	CCANNNNNTGG	3 cut(s)	302, 808, 996
VpaK11BI	GGWCC	2 cut(s)	1210, 1315
XagI	CCTNNNNNAGG	1 cut(s)	47
XapI	RAATTY	5 cut(s)	983, 1028, 1035, 1425, 1645
XceI	RCATGY	2 cut(s)	1051, 1327
XhoI	CTCGAG	1 cut(s)	1481
XmaJI	CCTAGG	1 cut(s)	688
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	4 cut(s)	155, 456, 506, 689
Zsp2I	ATGCAT	2 cut(s)	325, 1325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.