Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0003812

Physical Location & Seq

Genomic Coordinates Forward (+)

57759674 .. 57763054

Gene Structure 3381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG436000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGGTTCTCATGAGGACGGGAGATCGCTATTGGAAGATGGCCTTCTTCAGGATGAAGGCGAGGGATTGTACACAGGAGACGGCTCAGTCGACATTAAGGGAAATCCTGTTCTAAAGAAAAATACTGGAAACTGGAGAGCTTGCCCTTTCATTCTAGGTACCGAATGTTGTGAACGCTTGGCCTACTATGGGATTGCCACTAACCTGGGCACTTGCTATCTTACACCACTCATTGGGGCTGTCTTAGCAGATGCATACTGGGGAAGATACTGGACAATTGCTGTTTTTTCCACCATCTACTTTCTCGGAATGTGTACTTTGACTCTCTCGGCAACACTTCCTTCATTGATTCCAACTGAATGTGTTGGTTCAGTATGCCCTGCAGCTAGTACGTCACAGTATGCAGTGTTCTTCTTGGGGCTCTATCTGATTGCTCTAGGAACTGGTGGAATCAAGCCATGCGTTTCATCCTTTGGGGCGGATCAGTTTGATGATACTGATTCCAGGGAAAGGGTAAAGAAGGGATCTTTCTTCAACTGGTTTTACTTTTCTATCAACATTGGAGCTCTGATATCAAGTAGCTTTATAGTGTATATTCAAGACAATGCTGGATGGGGCCTAGGATTTGGTATTCCTGCATTGTTTATGGCTGTTGCTATTATTAGTTTCTTTTCAGGCACACCACTCTATAGATTTCAGAGACCAGGGGGAAGCCCTCTTACAAGAATGTGCCAGGTTTTGGTTGCCTCATTTCGTAAGCGGAGTGTGAATGTCCCTGAAGACAGTAGTCTCCTGTATGAGACACAAGATAAAATCTCTGCCATTGAAGGAAGTCGTAAACTGGAGCACAGTGATGAGCTCAAATGTCTTGATAAAGCTGCTGTGATATCAGAAGCAGAGGTCAAAACTGGGGAATTCTCTAATCCATGGAGGCTTTGCACTGTTACACAGGTGGAGGAATTCAAAATTTTAATCCGCATGTTCCCTATCTGGGCTACTGGAATTGTGTTTTCTGCTGTCTATGCCCAAATGTCAACTATGTTTGTGGAACAAGGGACGATGATGGATACATCTATTGGTTCTTTCACCATTCCCCCAGCCTCCCTCTCAACTTTTGATGTCATCAGTGTTATCTTCTGGGTCCCAATTTATGACAGGTTTATTGTCCCAATTGCAAGGAGATTTACTGGTAAAGAAAGGGGGTTCTCAGAGTTGCAAAGGATGGGCATTGGTCTTTTTCTTTCGGTCCTATGCATGTCAGCTGCTGCTGTGGTAGAGATTTATCGATTGCAGATTGCTAAAGAACTTGATTTGGTTGACAAAGACGTAGCTGTACCACTTAGTATCTTTTGGCAAATTCCTCAGTACTTCTTGTTGGGCGCTGCAGAGATTTTCACATTCATTGGGCAACTCGAGTTCTTCTACGACCAATCTCCAGATGCCATGCGCAGTTTATGCAGCGCCTTATCACTTCTGACCACTGCACTGGGCAATTATCTGAGCTCTTTCATTCTGACGGTAGTTACTTACTTGACAACACAAGGTGGGAGTTCTGGATGGATCCCTGACAACTTGAATTCAGGTCATCTGGATTATTTCTTCTGGCTCTTAGCAGGACTCAGCTTTATAAACATGGTGGTGTACATGGTCTGTGCCAGGAAATATAAACAGAAGAAGGCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006857 GO:0008150 GO:0009705 GO:0012505 GO:0015334 GO:0015833 GO:0016020 GO:0022857 GO:0031090 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098588 GO:0098805 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

561

Amino Acids

61.99

Weight (kDa)

5.2

Isoelectric Point (pI)

33.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PTR2	PF00854	90 - 521	4.6e-136	POT family
MFS_1	PF07690	121 - 497	5e-08	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62200 AT1G62200 AT1G62200 AT2G02040
fragaria_vesca	FvH4_3g15070 FvH4_4g35940 FvH4_4g35941
malus_domestica	MD13G1013700.v1.1 MD16G1010600.v1.1 MD16G1010700.v1.1
prunus_persica	Prupe.1G340000_v2.0.a1 Prupe.1G340000_v2.0.a1 Prupe.1G340000_v2.0.a1 Prupe.1G340100_v2.0.a1 Prupe.1G340100_v2.0.a1
pyrus_communis	pycom13g01150 pycom16g01030 pycom16g01040
rosa_chinensis	RchiOBHm_Chr4g0445571 RchiOBHm_Chr4g0445581
rosa_laevigata	RLG00000005729
rosa_multiflora	Rmu_ssc0000253.1_g000010 Rmu_ssc0000253.1_g000011
rosa_roxburghii	Rroxscaffold_5G00386040 Rroxscaffold_5G00386050
rosa_rugosa	Rorug04G0362600 Rorug04G0362600
rosa_samantha	Rh4AG424000 Rh4BG436000 Rh4BG436100 Rh4CG450700 Rh4DG432500
rosa_wichuraiana	Rw4G036340 Rw4G036350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1628
AasI	GACNNNNNNGTC	1 cut(s)	86
Acc16I	TGCGCA	1 cut(s)	1448
Acc65I	GGTACC	1 cut(s)	158
AccB1I	GGYRCC	1 cut(s)	158
AccB7I	CCANNNNNTGG	2 cut(s)	233, 739
AccI	GTMKAC	1 cut(s)	90
AciI	CCGC	3 cut(s)	479, 760, 976
AclWI	GGATC	4 cut(s)	489, 532, 1555, 1568
AcsI	RAATTY	5 cut(s)	914, 959, 966, 1356, 1576
AcuI	CTGAAG	2 cut(s)	32, 798
AdeI	CACNNNGTG	1 cut(s)	1544
AfaI	GTAC	7 cut(s)	71, 160, 316, 391, 1335, 1367, 1643
AfiI	CCNNNNNNNGG	6 cut(s)	49, 189, 233, 510, 739, 991
AgsI	TTSAA	5 cut(s)	535, 599, 827, 964, 1576
AjnI	CCWGG	5 cut(s)	204, 503, 703, 732, 1655
AloI	GAACNNNNNNTCC	2 cut(s)	93, 125
Alw21I	GWGCWC	4 cut(s)	568, 849, 861, 1505
Alw26I	GTCTC	4 cut(s)	72, 694, 794, 794
AlwI	GGATC	4 cut(s)	489, 532, 1555, 1568
AlwNI	CAGNNNCTG	1 cut(s)	1265
Ama87I	CYCGRG	1 cut(s)	1412
AoxI	GGCC	3 cut(s)	40, 180, 616
ApeKI	GCWGC	6 cut(s)	383, 878, 1262, 1265, 1382, 1458
ApoI	RAATTY	5 cut(s)	914, 959, 966, 1356, 1576
Asp718I	GGTACC	1 cut(s)	158
AspA2I	CCTAGG	1 cut(s)	619
AspLEI	GCGC	3 cut(s)	1382, 1449, 1463
AspS9I	GGNCC	3 cut(s)	616, 1141, 1246
AsuHPI	GGTGA	1 cut(s)	1078
AvaI	CYCGRG	1 cut(s)	1412
AvaII	GGWCC	2 cut(s)	1141, 1246
AvrII	CCTAGG	1 cut(s)	619
BaeGI	GKGCMC	1 cut(s)	212
BamHI	GGATCC	1 cut(s)	1560
BanI	GGYRCC	1 cut(s)	158
BanII	GRGCYC	4 cut(s)	423, 568, 861, 1505
BarI	GAAGNNNNNNTAC	2 cut(s)	703, 735
BbsI	GAAGAC	1 cut(s)	786
Bbv12I	GWGCWC	4 cut(s)	568, 849, 861, 1505
BbvI	GCAGC	6 cut(s)	395, 865, 1249, 1252, 1369, 1470
BccI	CCATC	6 cut(s)	32, 302, 606, 1057, 1216, 1551
BceAI	ACGGC	1 cut(s)	97
BciT130I	CCWGG	5 cut(s)	206, 505, 705, 734, 1657
BciVI	GTATCC	1 cut(s)	1060
BcoDI	GTCTC	4 cut(s)	72, 694, 794, 794
BfaI	CTAG	4 cut(s)	155, 387, 437, 620
BfmI	CTRYAG	3 cut(s)	381, 688, 1383
BfoI	RGCGCY	2 cut(s)	1383, 1464
BfuI	GTATCC	1 cut(s)	1060
BisI	GCNGC	6 cut(s)	384, 879, 1263, 1266, 1383, 1459
BlnI	CCTAGG	1 cut(s)	619
BlsI	GCNGC	6 cut(s)	385, 880, 1264, 1267, 1384, 1460
BmcAI	AGTACT	1 cut(s)	1367
Bme1390I	CCNGG	5 cut(s)	206, 505, 705, 734, 1657
Bme18I	GGWCC	2 cut(s)	1141, 1246
BmeT110I	CYCGRG	1 cut(s)	1412
BmgT120I	GGNCC	3 cut(s)	616, 1141, 1246
BmiI	GGNNCC	5 cut(s)	160, 617, 1142, 1143, 1562
BmrFI	CCNGG	5 cut(s)	206, 505, 705, 734, 1657
BmrI	ACTGGG	3 cut(s)	268, 918, 1496
BmsI	GCATC	2 cut(s)	241, 1429
BmuI	ACTGGG	3 cut(s)	268, 918, 1496
BoxI	GACNNNNGTC	1 cut(s)	786
BpiI	GAAGAC	1 cut(s)	786
BpmI	CTGGAG	3 cut(s)	154, 863, 1419
Bsa29I	ATCGAT	1 cut(s)	1285
BsaI	GGTCTC	1 cut(s)	694
BsaJI	CCNNGG	5 cut(s)	205, 504, 619, 704, 926
Bsc4I	CCNNNNNNNGG	6 cut(s)	49, 189, 233, 510, 739, 991
BseBI	CCWGG	5 cut(s)	206, 505, 705, 734, 1657
BseCI	ATCGAT	1 cut(s)	1285
BseDI	CCNNGG	5 cut(s)	205, 504, 619, 704, 926
BseGI	GGATG	5 cut(s)	58, 467, 617, 1227, 1562
BseLI	CCNNNNNNNGG	6 cut(s)	49, 189, 233, 510, 739, 991
BseMII	CTCAG	5 cut(s)	99, 1221, 1376, 1490, 1633
BseSI	GKGCMC	1 cut(s)	212
BseXI	GCAGC	6 cut(s)	395, 865, 1249, 1252, 1369, 1470
BseYI	CCCAGC	1 cut(s)	1096
BsgI	GTGCAG	1 cut(s)	1467
BshFI	GGCC	3 cut(s)	42, 182, 618
BshNI	GGYRCC	1 cut(s)	158
BshVI	ATCGAT	1 cut(s)	1285
BsiHKAI	GWGCWC	4 cut(s)	568, 849, 861, 1505
BsiHKCI	CYCGRG	1 cut(s)	1412
BslFI	GGGAC	4 cut(s)	758, 1069, 1127, 1151
BslI	CCNNNNNNNGG	6 cut(s)	49, 189, 233, 510, 739, 991
BsmAI	GTCTC	4 cut(s)	72, 694, 794, 794
BsmBI	CGTCTC	1 cut(s)	72
BsmFI	GGGAC	4 cut(s)	758, 1069, 1127, 1151
BsnI	GGCC	3 cut(s)	42, 182, 618
Bso31I	GGTCTC	1 cut(s)	694
BsoBI	CYCGRG	1 cut(s)	1412
Bsp1286I	GDGCHC	6 cut(s)	212, 423, 568, 849, 861, 1505
Bsp1407I	TGTACA	2 cut(s)	69, 1641
Bsp143I	GATC	4 cut(s)	23, 481, 524, 1560
Bsp19I	CCATGG	1 cut(s)	926
BspACI	CCGC	3 cut(s)	479, 760, 976
BspANI	GGCC	3 cut(s)	42, 182, 618
BspCNI	CTCAG	5 cut(s)	98, 1220, 1375, 1491, 1632
BspDI	ATCGAT	1 cut(s)	1285
BspHI	TCATGA	1 cut(s)	10
BspLI	GGNNCC	5 cut(s)	160, 617, 1142, 1143, 1562
BspMAI	CTGCAG	2 cut(s)	385, 1387
BspPI	GGATC	4 cut(s)	489, 532, 1555, 1568
BspT107I	GGYRCC	1 cut(s)	158
BspTNI	GGTCTC	1 cut(s)	694
BsrGI	TGTACA	2 cut(s)	69, 1641
BssECI	CCNNGG	5 cut(s)	205, 504, 619, 704, 926
BssMI	GATC	4 cut(s)	23, 481, 524, 1560
BssT1I	CCWWGG	2 cut(s)	619, 926
Bst2UI	CCWGG	5 cut(s)	206, 505, 705, 734, 1657
Bst4CI	ACNGT	5 cut(s)	399, 785, 851, 943, 1519
BstAPI	GCANNNNNTGC	1 cut(s)	1455
BstAUI	TGTACA	2 cut(s)	69, 1641
BstC8I	GCNNGC	1 cut(s)	142
BstDEI	CTNAG	8 cut(s)	85, 244, 1207, 1340, 1362, 1499, 1609, 1619
BstDSI	CCRYGG	1 cut(s)	926
BstENI	CCTNNNNNAGG	1 cut(s)	47
BstF5I	GGATG	5 cut(s)	58, 467, 617, 1227, 1562
BstH2I	RGCGCY	2 cut(s)	1383, 1464
BstHHI	GCGC	3 cut(s)	1382, 1449, 1463
BstKTI	GATC	4 cut(s)	26, 484, 527, 1563
BstMAI	GTCTC	4 cut(s)	72, 694, 794, 794
BstMBI	GATC	4 cut(s)	23, 481, 524, 1560
BstMWI	GCNNNNNNNGC	3 cut(s)	245, 1022, 1455
BstNI	CCWGG	5 cut(s)	206, 505, 705, 734, 1657
BstNSI	RCATGY	2 cut(s)	982, 1258
BstPAI	GACNNNNGTC	1 cut(s)	786
BstSCI	CCNGG	5 cut(s)	204, 503, 703, 732, 1655
BstSFI	CTRYAG	3 cut(s)	381, 688, 1383
BstSLI	GKGCMC	1 cut(s)	212
BstV1I	GCAGC	6 cut(s)	395, 865, 1249, 1252, 1369, 1470
BstV2I	GAAGAC	1 cut(s)	786
BstX2I	RGATCY	2 cut(s)	524, 1560
BstXI	CCANNNNNNTGG	2 cut(s)	205, 1486
BstYI	RGATCY	2 cut(s)	524, 1560
Bsu15I	ATCGAT	1 cut(s)	1285
BsuI	GTATCC	1 cut(s)	1060
BsuRI	GGCC	3 cut(s)	42, 182, 618
BsuTUI	ATCGAT	1 cut(s)	1285
BtgI	CCRYGG	1 cut(s)	926
BtsCI	GGATG	5 cut(s)	58, 467, 617, 1227, 1562
BtsI	GCAGTG	2 cut(s)	411, 1479
BtsIMutI	CAGTG	6 cut(s)	411, 856, 939, 1132, 1479, 1484
Cac8I	GCNNGC	1 cut(s)	142
CaiI	CAGNNNCTG	1 cut(s)	1265
CciI	TCATGA	1 cut(s)	10
CfoI	GCGC	3 cut(s)	1382, 1449, 1463
Cfr13I	GGNCC	3 cut(s)	616, 1141, 1246
ClaI	ATCGAT	1 cut(s)	1285
Csp6I	GTAC	7 cut(s)	70, 159, 315, 390, 1334, 1366, 1642
CviAII	CATG	8 cut(s)	11, 459, 927, 979, 1255, 1444, 1633, 1645
CviQI	GTAC	7 cut(s)	70, 159, 315, 390, 1334, 1366, 1642
DdeI	CTNAG	8 cut(s)	85, 244, 1207, 1340, 1362, 1499, 1609, 1619
DpnI	GATC	4 cut(s)	25, 483, 526, 1562
DpnII	GATC	4 cut(s)	23, 481, 524, 1560
DraIII	CACNNNGTG	1 cut(s)	1544
DrdI	GACNNNNNNGTC	1 cut(s)	86
DseDI	GACNNNNNNGTC	1 cut(s)	86
EciI	GGCGGA	1 cut(s)	494
Ecl136II	GAGCTC	3 cut(s)	566, 859, 1503
Eco130I	CCWWGG	2 cut(s)	619, 926
Eco24I	GRGCYC	4 cut(s)	423, 568, 861, 1505
Eco31I	GGTCTC	1 cut(s)	694
Eco32I	GATATC	2 cut(s)	573, 888
Eco47I	GGWCC	2 cut(s)	1141, 1246
Eco53kI	GAGCTC	3 cut(s)	566, 859, 1503
Eco57I	CTGAAG	2 cut(s)	32, 798
Eco88I	CYCGRG	1 cut(s)	1412
EcoICRI	GAGCTC	3 cut(s)	566, 859, 1503
EcoNI	CCTNNNNNAGG	1 cut(s)	47
EcoO109I	RGGNCCY	2 cut(s)	616, 1141
EcoRI	GAATTC	3 cut(s)	914, 959, 1576
EcoRII	CCWGG	5 cut(s)	204, 503, 703, 732, 1655
EcoRV	GATATC	2 cut(s)	573, 888
EcoT14I	CCWWGG	2 cut(s)	619, 926
EcoT22I	ATGCAT	2 cut(s)	256, 1256
EcoT38I	GRGCYC	4 cut(s)	423, 568, 861, 1505
ErhI	CCWWGG	2 cut(s)	619, 926
Esp3I	CGTCTC	1 cut(s)	72
FaeI	CATG	8 cut(s)	14, 462, 930, 982, 1258, 1447, 1636, 1648
FalI	AAGNNNNNCTT	2 cut(s)	27, 59
FaqI	GGGAC	4 cut(s)	758, 1069, 1127, 1151
FatI	CATG	8 cut(s)	10, 458, 926, 978, 1254, 1443, 1632, 1644
FblI	GTMKAC	1 cut(s)	90
Fnu4HI	GCNGC	6 cut(s)	384, 879, 1263, 1266, 1383, 1459
FokI	GGATG	5 cut(s)	65, 454, 624, 1234, 1569
FriOI	GRGCYC	4 cut(s)	423, 568, 861, 1505
Fsp4HI	GCNGC	6 cut(s)	384, 879, 1263, 1266, 1383, 1459
FspBI	CTAG	4 cut(s)	155, 387, 437, 620
FspI	TGCGCA	1 cut(s)	1448
GlaI	GCGC	3 cut(s)	1381, 1448, 1462
GluI	GCNGC	6 cut(s)	384, 879, 1263, 1266, 1383, 1459
GsaI	CCCAGC	1 cut(s)	1100
GsuI	CTGGAG	3 cut(s)	154, 863, 1419
HaeII	RGCGCY	2 cut(s)	1383, 1464
HaeIII	GGCC	3 cut(s)	42, 182, 618
HhaI	GCGC	3 cut(s)	1382, 1449, 1463
Hin1II	CATG	8 cut(s)	14, 462, 930, 982, 1258, 1447, 1636, 1648
Hin6I	GCGC	3 cut(s)	1380, 1447, 1461
HinP1I	GCGC	3 cut(s)	1380, 1447, 1461
HincII	GTYRAC	3 cut(s)	91, 1035, 1318
HindII	GTYRAC	3 cut(s)	91, 1035, 1318
HinfI	GANTC	5 cut(s)	322, 349, 450, 500, 1617
HphI	GGTGA	1 cut(s)	1078
Hpy166II	GTNNAC	8 cut(s)	72, 91, 173, 315, 839, 1035, 1318, 1642
Hpy188I	TCNGA	9 cut(s)	308, 429, 570, 699, 892, 1210, 1476, 1500, 1515
Hpy188III	TCNNGA	7 cut(s)	11, 50, 599, 869, 1436, 1554, 1589
Hpy8I	GTNNAC	8 cut(s)	72, 91, 173, 315, 839, 1035, 1318, 1642
HpyAV	CCTTC	6 cut(s)	50, 53, 351, 514, 821, 1669
HpyCH4III	ACNGT	5 cut(s)	399, 785, 851, 943, 1519
HpyCH4IV	ACGT	2 cut(s)	392, 1326
HpyF10VI	GCNNNNNNNGC	3 cut(s)	245, 1022, 1455
HpyF3I	CTNAG	8 cut(s)	85, 244, 1207, 1340, 1362, 1499, 1609, 1619
HpySE526I	ACGT	2 cut(s)	392, 1326
Hsp92II	CATG	8 cut(s)	14, 462, 930, 982, 1258, 1447, 1636, 1648
HspAI	GCGC	3 cut(s)	1380, 1447, 1461
KflI	GGGWCCC	1 cut(s)	1141
KpnI	GGTACC	1 cut(s)	162
Kzo9I	GATC	4 cut(s)	23, 481, 524, 1560
LmnI	GCTCC	2 cut(s)	563, 844
Lsp1109I	GCAGC	6 cut(s)	395, 865, 1249, 1252, 1369, 1470
LweI	GCATC	2 cut(s)	241, 1429
MaeI	CTAG	4 cut(s)	155, 387, 437, 620
MaeII	ACGT	2 cut(s)	392, 1326
MaeIII	GTNAC	3 cut(s)	393, 943, 1522
MalI	GATC	4 cut(s)	25, 483, 526, 1562
MboI	GATC	4 cut(s)	23, 481, 524, 1560
MfeI	CAATTG	2 cut(s)	276, 1170
MflI	RGATCY	2 cut(s)	524, 1560
MhlI	GDGCHC	6 cut(s)	212, 423, 568, 849, 861, 1505
MlyI	GAGTC	2 cut(s)	316, 1611
MmeI	TCCRAC	1 cut(s)	377
Mph1103I	ATGCAT	2 cut(s)	256, 1256
MseI	TTAA	3 cut(s)	96, 971, 1684
MslI	CAYNNNNRTG	2 cut(s)	852, 1637
MspA1I	CMGCKG	1 cut(s)	1262
MspR9I	CCNGG	5 cut(s)	206, 505, 705, 734, 1657
MunI	CAATTG	2 cut(s)	276, 1170
MvaI	CCWGG	5 cut(s)	206, 505, 705, 734, 1657
MwoI	GCNNNNNNNGC	3 cut(s)	245, 1022, 1455
NcoI	CCATGG	1 cut(s)	926
NdeII	GATC	4 cut(s)	23, 481, 524, 1560
NlaIII	CATG	8 cut(s)	14, 462, 930, 982, 1258, 1447, 1636, 1648
NlaIV	GGNNCC	5 cut(s)	160, 617, 1142, 1143, 1562
NmeAIII	GCCGAG	1 cut(s)	308
NmuCI	GTSAC	1 cut(s)	393
NsbI	TGCGCA	1 cut(s)	1448
NsiI	ATGCAT	2 cut(s)	256, 1256
NspI	RCATGY	2 cut(s)	982, 1258
PaeR7I	CTCGAG	1 cut(s)	1412
PagI	TCATGA	1 cut(s)	10
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PfeI	GAWTC	3 cut(s)	349, 450, 500
PflMI	CCANNNNNTGG	2 cut(s)	233, 739
PkrI	GCNGC	6 cut(s)	385, 880, 1264, 1267, 1384, 1460
PleI	GAGTC	2 cut(s)	316, 1611
PpsI	GAGTC	2 cut(s)	316, 1611
PpuMI	RGGWCCY	1 cut(s)	1141
PshAI	GACNNNNGTC	1 cut(s)	786
PsiI	TTATAA	1 cut(s)	1628
Psp124BI	GAGCTC	3 cut(s)	568, 861, 1505
Psp5II	RGGWCCY	1 cut(s)	1141
Psp6I	CCWGG	5 cut(s)	204, 503, 703, 732, 1655
PspFI	CCCAGC	1 cut(s)	1096
PspGI	CCWGG	5 cut(s)	204, 503, 703, 732, 1655
PspN4I	GGNNCC	5 cut(s)	160, 617, 1142, 1143, 1562
PspPI	GGNCC	3 cut(s)	616, 1141, 1246
PspPPI	RGGWCCY	1 cut(s)	1141
PspXI	VCTCGAGB	1 cut(s)	1412
PsrI	GAACNNNNNNTAC	2 cut(s)	392, 424
PstI	CTGCAG	2 cut(s)	385, 1387
PstNI	CAGNNNCTG	1 cut(s)	1265
PsuI	RGATCY	2 cut(s)	524, 1560
PvuII	CAGCTG	1 cut(s)	1262
RsaI	GTAC	7 cut(s)	71, 160, 316, 391, 1335, 1367, 1643
RsaNI	GTAC	7 cut(s)	70, 159, 315, 390, 1334, 1366, 1642
RseI	CAYNNNNRTG	2 cut(s)	852, 1637
SacI	GAGCTC	3 cut(s)	568, 861, 1505
SalI	GTCGAC	1 cut(s)	89
SaqAI	TTAA	3 cut(s)	96, 971, 1684
SatI	GCNGC	6 cut(s)	384, 879, 1263, 1266, 1383, 1459
Sau3AI	GATC	4 cut(s)	23, 481, 524, 1560
Sau96I	GGNCC	3 cut(s)	616, 1141, 1246
ScaI	AGTACT	1 cut(s)	1367
SchI	GAGTC	2 cut(s)	316, 1611
ScrFI	CCNGG	5 cut(s)	206, 505, 705, 734, 1657
SduI	GDGCHC	6 cut(s)	212, 423, 568, 849, 861, 1505
SfaNI	GCATC	2 cut(s)	241, 1429
SfcI	CTRYAG	3 cut(s)	381, 688, 1383
Sfr274I	CTCGAG	1 cut(s)	1412
SinI	GGWCC	2 cut(s)	1141, 1246
SlaI	CTCGAG	1 cut(s)	1412
SmiMI	CAYNNNNRTG	2 cut(s)	852, 1637
SmlI	CTYRAG	1 cut(s)	1412
SmoI	CTYRAG	1 cut(s)	1412
SsiI	CCGC	3 cut(s)	479, 760, 976
SspMI	CTAG	4 cut(s)	155, 387, 437, 620
SstI	GAGCTC	3 cut(s)	568, 861, 1505
StyD4I	CCNGG	5 cut(s)	204, 503, 703, 732, 1655
StyI	CCWWGG	2 cut(s)	619, 926
TaaI	ACNGT	5 cut(s)	399, 785, 851, 943, 1519
TaiI	ACGT	2 cut(s)	395, 1329
TaqI	TCGA	3 cut(s)	90, 1285, 1413
TaqII	GACCGA	1 cut(s)	1234
TatI	WGTACW	4 cut(s)	69, 314, 1365, 1641
TfiI	GAWTC	3 cut(s)	349, 450, 500
Tru1I	TTAA	3 cut(s)	96, 971, 1684
Tru9I	TTAA	3 cut(s)	96, 971, 1684
TscAI	CASTG	6 cut(s)	411, 856, 946, 1132, 1486, 1491
TseFI	GTSAC	1 cut(s)	393
TseI	GCWGC	6 cut(s)	383, 878, 1262, 1265, 1382, 1458
Tsp45I	GTSAC	1 cut(s)	393
TspDTI	ATGAA	6 cut(s)	69, 139, 333, 456, 1390, 1498
TspRI	CASTG	6 cut(s)	411, 856, 946, 1132, 1486, 1491
Van91I	CCANNNNNTGG	2 cut(s)	233, 739
VpaK11BI	GGWCC	2 cut(s)	1141, 1246
XagI	CCTNNNNNAGG	1 cut(s)	47
XapI	RAATTY	5 cut(s)	914, 959, 966, 1356, 1576
XceI	RCATGY	2 cut(s)	982, 1258
XhoI	CTCGAG	1 cut(s)	1412
XmaJI	CCTAGG	1 cut(s)	619
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	4 cut(s)	155, 387, 437, 620
ZrmI	AGTACT	1 cut(s)	1367
Zsp2I	ATGCAT	2 cut(s)	256, 1256

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.