Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0003812

Physical Location & Seq

Genomic Coordinates Forward (+)

63182990 .. 63186805

Gene Structure 3816 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G036340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGGTTCTCATGAGGACGGGAGATCGCTATTGGAAGATGGCCTTCTTCAGGTTCGTAAGGATGAAGGCGAGGGATTGTACACAGGAGACGGCTCAGTCGACATTAAGGGAAATCCTGTTCTAAAGAAAAATACTGGAAACTGGAGAGCTTGCCCTTTCATTCTAGGTACCGAATGTTGTGAACGCTTGGCCTACTATGGGATTGCCACTAACCTGGTTACTTATCTTACAAGCAAATTGCACGAAGGAAATGTTGCTGCTGCAAGAAATGTTACCACTTGGCAGGGCACTTGCTATCTTACACCACTCATTGGGGCTGTCTTAGCAGATGCATACTGGGGAAGATACTGGACAATTGCTGTTTTTTCCACCATCTACTTTCTCGGAATGTGTACTTTGACTCTCTCGGCAACACTTCCTTCATTGATTCCAACTGAATGTGTTGGTTCAGTATGCCCTGCAGCTAGTACGTCACAGTATGCAGTGTTCTTCTTGGGGCTCTATCTGATTGCTCTAGGAACTGGTGGAATCAAGCCATGCGTTTCATCCTTTGGGGCGGATCAGTTTGATGATACTGATTCCAGGGAAAGGGTAAAGAAGGGATCTTTCTTCAACTGGTTTTACTTTTCTATCAACATTGGAGCTCTGATATCAAGTAGCTTTATAGTGTATATTCAAGACAATGCTGGATGGGGCCTAGGATTTGGTATTCCTGCATTGTTTATGGCTGTCGCTATTATTAGTTTCTTTTCAGGCACACCACTCTATAGATTTCAGAGACCAGGGGGAAGCCCTCTTACAAGAATGTGCCAGGTTTTGGTTGCCTCATTTCATAAGCGGAGTGTGAATGTCCCTGAAGACAGTAGTCTCCTGTATGAGACACAAGATAAAATCTCCGCCATTGAAGGAAGTCGTAAACTGGAGCACAGTGATGAGCTCAAATGTCTTGATAAGGCTGCTGTGATATCAGAAGCAGAGGTCAAAACTGGAGAATTCTCCAATCCATGGAGGCTTTGCACTGTTACACAGGTGGAGGAATTCAAAATTTTAATCCGCATGTTCCCTATCTGGGCTACTGGAATTGTGTTTTCTGCTGTCTATGCCCAAATGTCAACTATGTTTGTGGAACAAGGGACGATGATGGATACATCTATTGGTTCTTTCACCATTCCCCCAGCCTCCCTCTCAAGTTTTGATGTCATCAGTGTTATCTTCTGGGTCCCAATTTATGACAGGTTTATTGTCCCAATTGCAAGGAGATTTACTGGTAAAGAAAGGGGGTTCTCAGAGTTGCAAAGGATGGGCATTGGTCTCTTTCTTTCGGTCCTATGCATGTCAGCTGCTGCTGTGGTAGAGATTTATCGATTGCAGATTGCTAAAGAACTTGATTTGGTTGACAAAGATGTAGCTGTACCACTTAGTATCTTTTGGCAAATTCCTCAATACTTCTTGTTGGGCGCTGCAGAGATTTTCACATTCATTGGGCAACTCGAGTTCTTCTACGACCAATCTCCAGATGCCATGCGCAGTTTATGCAGCGCCTTATCACTTCTGACCACTGCACTGGGCAATTATCTGAGCTCTTTCATTCTGACGGTGGTAACTTACTTGACAACACAAGGTGGGAGTTCTGGATGGATCCCTGACAACTTGAATTCAGGTCATCTGGATTATTTCTTCTGGCTCTTAGCAGGACTCAGCTTTATAAACATGGTGGTGTACATGGTCTGCGCCAGGAAATATAAACAGAAGAAGGCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005794 GO:0006810 GO:0006857 GO:0008150 GO:0009705 GO:0012505 GO:0015334 GO:0015833 GO:0016020 GO:0022857 GO:0031090 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0042937 GO:0042938 GO:0042939 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0098588 GO:0098805 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

587

Amino Acids

64.88

Weight (kDa)

5.59

Isoelectric Point (pI)

31.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	59 - 523	1e-09	Major Facilitator Superfamily
PTR2	PF00854	116 - 547	1.2e-135	POT family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003812)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62200 AT1G62200 AT1G62200 AT2G02040
fragaria_vesca	FvH4_3g15070 FvH4_4g35940 FvH4_4g35941
malus_domestica	MD13G1013700.v1.1 MD16G1010600.v1.1 MD16G1010700.v1.1
prunus_persica	Prupe.1G340000_v2.0.a1 Prupe.1G340000_v2.0.a1 Prupe.1G340000_v2.0.a1 Prupe.1G340100_v2.0.a1 Prupe.1G340100_v2.0.a1
pyrus_communis	pycom13g01150 pycom16g01030 pycom16g01040
rosa_chinensis	RchiOBHm_Chr4g0445571 RchiOBHm_Chr4g0445581
rosa_laevigata	RLG00000005729
rosa_multiflora	Rmu_ssc0000253.1_g000010 Rmu_ssc0000253.1_g000011
rosa_roxburghii	Rroxscaffold_5G00386040 Rroxscaffold_5G00386050
rosa_rugosa	Rorug04G0362600 Rorug04G0362600
rosa_samantha	Rh4AG424000 Rh4BG436000 Rh4BG436100 Rh4CG450700 Rh4DG432500
rosa_wichuraiana	Rw4G036340 Rw4G036350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1706
AasI	GACNNNNNNGTC	1 cut(s)	95
Acc16I	TGCGCA	1 cut(s)	1526
Acc65I	GGTACC	1 cut(s)	167
AccB1I	GGYRCC	1 cut(s)	167
AccB7I	CCANNNNNTGG	3 cut(s)	311, 817, 1005
AccI	GTMKAC	1 cut(s)	99
AciI	CCGC	4 cut(s)	557, 838, 897, 1054
AclWI	GGATC	4 cut(s)	567, 610, 1633, 1646
AcsI	RAATTY	5 cut(s)	992, 1037, 1044, 1434, 1654
AcuI	CTGAAG	2 cut(s)	32, 876
AdeI	CACNNNGTG	1 cut(s)	1622
AfaI	GTAC	6 cut(s)	80, 169, 394, 469, 1413, 1721
AfiI	CCNNNNNNNGG	7 cut(s)	49, 198, 311, 588, 817, 1005, 1069
AgsI	TTSAA	5 cut(s)	613, 677, 905, 1042, 1654
AjnI	CCWGG	5 cut(s)	213, 581, 781, 810, 1733
AloI	GAACNNNNNNTCC	2 cut(s)	102, 134
AluBI	AGCT	9 cut(s)	149, 464, 644, 660, 937, 1340, 1409, 1581, 1701
AluI	AGCT	9 cut(s)	149, 464, 644, 660, 937, 1340, 1409, 1581, 1701
Alw21I	GWGCWC	4 cut(s)	646, 927, 939, 1583
Alw26I	GTCTC	5 cut(s)	81, 772, 872, 872, 1316
AlwI	GGATC	4 cut(s)	567, 610, 1633, 1646
AlwNI	CAGNNNCTG	1 cut(s)	1343
Ama87I	CYCGRG	1 cut(s)	1490
AoxI	GGCC	3 cut(s)	40, 189, 694
ApeKI	GCWGC	8 cut(s)	257, 260, 461, 956, 1340, 1343, 1460, 1536
ApoI	RAATTY	5 cut(s)	992, 1037, 1044, 1434, 1654
Asp718I	GGTACC	1 cut(s)	167
AspA2I	CCTAGG	1 cut(s)	697
AspLEI	GCGC	4 cut(s)	1460, 1527, 1541, 1733
AspS9I	GGNCC	3 cut(s)	694, 1219, 1324
AsuHPI	GGTGA	1 cut(s)	1156
AvaI	CYCGRG	1 cut(s)	1490
AvaII	GGWCC	2 cut(s)	1219, 1324
AvrII	CCTAGG	1 cut(s)	697
BaeGI	GKGCMC	1 cut(s)	290
BamHI	GGATCC	1 cut(s)	1638
BanI	GGYRCC	1 cut(s)	167
BanII	GRGCYC	4 cut(s)	501, 646, 939, 1583
BarI	GAAGNNNNNNTAC	2 cut(s)	781, 813
BbsI	GAAGAC	1 cut(s)	864
Bbv12I	GWGCWC	4 cut(s)	646, 927, 939, 1583
BbvI	GCAGC	8 cut(s)	244, 247, 473, 943, 1327, 1330, 1447, 1548
BccI	CCATC	6 cut(s)	32, 380, 684, 1135, 1294, 1629
BceAI	ACGGC	1 cut(s)	106
BciT130I	CCWGG	5 cut(s)	215, 583, 783, 812, 1735
BciVI	GTATCC	1 cut(s)	1138
BcoDI	GTCTC	5 cut(s)	81, 772, 872, 872, 1316
BfaI	CTAG	4 cut(s)	164, 465, 515, 698
BfmI	CTRYAG	3 cut(s)	459, 766, 1461
BfoI	RGCGCY	2 cut(s)	1461, 1542
BfuI	GTATCC	1 cut(s)	1138
BisI	GCNGC	8 cut(s)	258, 261, 462, 957, 1341, 1344, 1461, 1537
BlnI	CCTAGG	1 cut(s)	697
BlsI	GCNGC	8 cut(s)	259, 262, 463, 958, 1342, 1345, 1462, 1538
Bme1390I	CCNGG	5 cut(s)	215, 583, 783, 812, 1735
Bme18I	GGWCC	2 cut(s)	1219, 1324
BmeT110I	CYCGRG	1 cut(s)	1490
BmgT120I	GGNCC	3 cut(s)	694, 1219, 1324
BmiI	GGNNCC	5 cut(s)	169, 695, 1220, 1221, 1640
BmrFI	CCNGG	5 cut(s)	215, 583, 783, 812, 1735
BmrI	ACTGGG	2 cut(s)	346, 1574
BmsI	GCATC	2 cut(s)	319, 1507
BmuI	ACTGGG	2 cut(s)	346, 1574
BoxI	GACNNNNGTC	1 cut(s)	864
BpiI	GAAGAC	1 cut(s)	864
BpmI	CTGGAG	4 cut(s)	163, 941, 1008, 1497
BpuEI	CTTGAG	1 cut(s)	1171
Bsa29I	ATCGAT	1 cut(s)	1363
BsaI	GGTCTC	2 cut(s)	772, 1316
BsaJI	CCNNGG	4 cut(s)	582, 697, 782, 1004
Bsc4I	CCNNNNNNNGG	7 cut(s)	49, 198, 311, 588, 817, 1005, 1069
BseBI	CCWGG	5 cut(s)	215, 583, 783, 812, 1735
BseCI	ATCGAT	1 cut(s)	1363
BseDI	CCNNGG	4 cut(s)	582, 697, 782, 1004
BseGI	GGATG	5 cut(s)	67, 545, 695, 1305, 1640
BseLI	CCNNNNNNNGG	7 cut(s)	49, 198, 311, 588, 817, 1005, 1069
BseMII	CTCAG	4 cut(s)	108, 1299, 1568, 1711
BseSI	GKGCMC	1 cut(s)	290
BseXI	GCAGC	8 cut(s)	244, 247, 473, 943, 1327, 1330, 1447, 1548
BseYI	CCCAGC	1 cut(s)	1174
BsgI	GTGCAG	1 cut(s)	1545
BshFI	GGCC	3 cut(s)	42, 191, 696
BshNI	GGYRCC	1 cut(s)	167
BshVI	ATCGAT	1 cut(s)	1363
BsiHKAI	GWGCWC	4 cut(s)	646, 927, 939, 1583
BsiHKCI	CYCGRG	1 cut(s)	1490
BslFI	GGGAC	4 cut(s)	836, 1147, 1205, 1229
BslI	CCNNNNNNNGG	7 cut(s)	49, 198, 311, 588, 817, 1005, 1069
BsmAI	GTCTC	5 cut(s)	81, 772, 872, 872, 1316
BsmBI	CGTCTC	1 cut(s)	81
BsmFI	GGGAC	4 cut(s)	836, 1147, 1205, 1229
BsnI	GGCC	3 cut(s)	42, 191, 696
Bso31I	GGTCTC	2 cut(s)	772, 1316
BsoBI	CYCGRG	1 cut(s)	1490
Bsp1286I	GDGCHC	6 cut(s)	290, 501, 646, 927, 939, 1583
Bsp1407I	TGTACA	2 cut(s)	78, 1719
Bsp143I	GATC	4 cut(s)	23, 559, 602, 1638
Bsp19I	CCATGG	1 cut(s)	1004
BspACI	CCGC	4 cut(s)	557, 838, 897, 1054
BspANI	GGCC	3 cut(s)	42, 191, 696
BspCNI	CTCAG	4 cut(s)	107, 1298, 1569, 1710
BspDI	ATCGAT	1 cut(s)	1363
BspHI	TCATGA	1 cut(s)	10
BspLI	GGNNCC	5 cut(s)	169, 695, 1220, 1221, 1640
BspMAI	CTGCAG	2 cut(s)	463, 1465
BspPI	GGATC	4 cut(s)	567, 610, 1633, 1646
BspT107I	GGYRCC	1 cut(s)	167
BspTNI	GGTCTC	2 cut(s)	772, 1316
BsrGI	TGTACA	2 cut(s)	78, 1719
BssECI	CCNNGG	4 cut(s)	582, 697, 782, 1004
BssMI	GATC	4 cut(s)	23, 559, 602, 1638
BssT1I	CCWWGG	2 cut(s)	697, 1004
Bst2UI	CCWGG	5 cut(s)	215, 583, 783, 812, 1735
Bst4CI	ACNGT	5 cut(s)	477, 863, 929, 1021, 1597
BstAPI	GCANNNNNTGC	1 cut(s)	1533
BstAUI	TGTACA	2 cut(s)	78, 1719
BstC8I	GCNNGC	1 cut(s)	151
BstDEI	CTNAG	7 cut(s)	94, 322, 1285, 1418, 1577, 1687, 1697
BstDSI	CCRYGG	1 cut(s)	1004
BstENI	CCTNNNNNAGG	1 cut(s)	47
BstF5I	GGATG	5 cut(s)	67, 545, 695, 1305, 1640
BstH2I	RGCGCY	2 cut(s)	1461, 1542
BstHHI	GCGC	4 cut(s)	1460, 1527, 1541, 1733
BstKTI	GATC	4 cut(s)	26, 562, 605, 1641
BstMAI	GTCTC	5 cut(s)	81, 772, 872, 872, 1316
BstMBI	GATC	4 cut(s)	23, 559, 602, 1638
BstMWI	GCNNNNNNNGC	3 cut(s)	323, 1100, 1533
BstNI	CCWGG	5 cut(s)	215, 583, 783, 812, 1735
BstNSI	RCATGY	2 cut(s)	1060, 1336
BstPAI	GACNNNNGTC	1 cut(s)	864
BstSCI	CCNGG	5 cut(s)	213, 581, 781, 810, 1733
BstSFI	CTRYAG	3 cut(s)	459, 766, 1461
BstSLI	GKGCMC	1 cut(s)	290
BstV1I	GCAGC	8 cut(s)	244, 247, 473, 943, 1327, 1330, 1447, 1548
BstV2I	GAAGAC	1 cut(s)	864
BstX2I	RGATCY	2 cut(s)	602, 1638
BstXI	CCANNNNNNTGG	2 cut(s)	214, 1564
BstYI	RGATCY	2 cut(s)	602, 1638
Bsu15I	ATCGAT	1 cut(s)	1363
BsuI	GTATCC	1 cut(s)	1138
BsuRI	GGCC	3 cut(s)	42, 191, 696
BsuTUI	ATCGAT	1 cut(s)	1363
BtgI	CCRYGG	1 cut(s)	1004
BtsCI	GGATG	5 cut(s)	67, 545, 695, 1305, 1640
BtsI	GCAGTG	2 cut(s)	489, 1557
BtsIMutI	CAGTG	6 cut(s)	489, 934, 1017, 1210, 1557, 1562
Cac8I	GCNNGC	1 cut(s)	151
CaiI	CAGNNNCTG	1 cut(s)	1343
CciI	TCATGA	1 cut(s)	10
CfoI	GCGC	4 cut(s)	1460, 1527, 1541, 1733
Cfr13I	GGNCC	3 cut(s)	694, 1219, 1324
ClaI	ATCGAT	1 cut(s)	1363
CsiI	ACCWGGT	1 cut(s)	213
Csp6I	GTAC	6 cut(s)	79, 168, 393, 468, 1412, 1720
CviAII	CATG	8 cut(s)	11, 537, 1005, 1057, 1333, 1522, 1711, 1723
CviQI	GTAC	6 cut(s)	79, 168, 393, 468, 1412, 1720
DdeI	CTNAG	7 cut(s)	94, 322, 1285, 1418, 1577, 1687, 1697
DpnI	GATC	4 cut(s)	25, 561, 604, 1640
DpnII	GATC	4 cut(s)	23, 559, 602, 1638
DraIII	CACNNNGTG	1 cut(s)	1622
DrdI	GACNNNNNNGTC	1 cut(s)	95
DseDI	GACNNNNNNGTC	1 cut(s)	95
EciI	GGCGGA	2 cut(s)	572, 886
Ecl136II	GAGCTC	3 cut(s)	644, 937, 1581
Eco130I	CCWWGG	2 cut(s)	697, 1004
Eco24I	GRGCYC	4 cut(s)	501, 646, 939, 1583
Eco31I	GGTCTC	2 cut(s)	772, 1316
Eco32I	GATATC	2 cut(s)	651, 966
Eco47I	GGWCC	2 cut(s)	1219, 1324
Eco53kI	GAGCTC	3 cut(s)	644, 937, 1581
Eco57I	CTGAAG	2 cut(s)	32, 876
Eco88I	CYCGRG	1 cut(s)	1490
EcoICRI	GAGCTC	3 cut(s)	644, 937, 1581
EcoNI	CCTNNNNNAGG	1 cut(s)	47
EcoO109I	RGGNCCY	2 cut(s)	694, 1219
EcoRI	GAATTC	3 cut(s)	992, 1037, 1654
EcoRII	CCWGG	5 cut(s)	213, 581, 781, 810, 1733
EcoRV	GATATC	2 cut(s)	651, 966
EcoT14I	CCWWGG	2 cut(s)	697, 1004
EcoT22I	ATGCAT	2 cut(s)	334, 1334
EcoT38I	GRGCYC	4 cut(s)	501, 646, 939, 1583
ErhI	CCWWGG	2 cut(s)	697, 1004
Esp3I	CGTCTC	1 cut(s)	81
FaeI	CATG	8 cut(s)	14, 540, 1008, 1060, 1336, 1525, 1714, 1726
FalI	AAGNNNNNCTT	2 cut(s)	27, 59
FaqI	GGGAC	4 cut(s)	836, 1147, 1205, 1229
FatI	CATG	8 cut(s)	10, 536, 1004, 1056, 1332, 1521, 1710, 1722
FblI	GTMKAC	1 cut(s)	99
Fnu4HI	GCNGC	8 cut(s)	258, 261, 462, 957, 1341, 1344, 1461, 1537
FokI	GGATG	5 cut(s)	74, 532, 702, 1312, 1647
FriOI	GRGCYC	4 cut(s)	501, 646, 939, 1583
Fsp4HI	GCNGC	8 cut(s)	258, 261, 462, 957, 1341, 1344, 1461, 1537
FspBI	CTAG	4 cut(s)	164, 465, 515, 698
FspI	TGCGCA	1 cut(s)	1526
GlaI	GCGC	4 cut(s)	1459, 1526, 1540, 1732
GluI	GCNGC	8 cut(s)	258, 261, 462, 957, 1341, 1344, 1461, 1537
GsaI	CCCAGC	1 cut(s)	1178
GsuI	CTGGAG	4 cut(s)	163, 941, 1008, 1497
HaeII	RGCGCY	2 cut(s)	1461, 1542
HaeIII	GGCC	3 cut(s)	42, 191, 696
HhaI	GCGC	4 cut(s)	1460, 1527, 1541, 1733
Hin1II	CATG	8 cut(s)	14, 540, 1008, 1060, 1336, 1525, 1714, 1726
Hin6I	GCGC	4 cut(s)	1458, 1525, 1539, 1731
HinP1I	GCGC	4 cut(s)	1458, 1525, 1539, 1731
HincII	GTYRAC	3 cut(s)	100, 1113, 1396
HindII	GTYRAC	3 cut(s)	100, 1113, 1396
HinfI	GANTC	5 cut(s)	400, 427, 528, 578, 1695
HphI	GGTGA	1 cut(s)	1156
Hpy166II	GTNNAC	8 cut(s)	81, 100, 182, 393, 917, 1113, 1396, 1720
Hpy188I	TCNGA	9 cut(s)	386, 507, 648, 777, 970, 1288, 1554, 1578, 1593
Hpy188III	TCNNGA	6 cut(s)	11, 677, 947, 1514, 1632, 1667
Hpy8I	GTNNAC	8 cut(s)	81, 100, 182, 393, 917, 1113, 1396, 1720
HpyAV	CCTTC	7 cut(s)	53, 59, 239, 429, 592, 899, 1747
HpyCH4III	ACNGT	5 cut(s)	477, 863, 929, 1021, 1597
HpyCH4IV	ACGT	1 cut(s)	470
HpyF10VI	GCNNNNNNNGC	3 cut(s)	323, 1100, 1533
HpyF3I	CTNAG	7 cut(s)	94, 322, 1285, 1418, 1577, 1687, 1697
HpySE526I	ACGT	1 cut(s)	470
Hsp92II	CATG	8 cut(s)	14, 540, 1008, 1060, 1336, 1525, 1714, 1726
HspAI	GCGC	4 cut(s)	1458, 1525, 1539, 1731
KflI	GGGWCCC	1 cut(s)	1219
KpnI	GGTACC	1 cut(s)	171
Kzo9I	GATC	4 cut(s)	23, 559, 602, 1638
LmnI	GCTCC	2 cut(s)	641, 922
Lsp1109I	GCAGC	8 cut(s)	244, 247, 473, 943, 1327, 1330, 1447, 1548
LweI	GCATC	2 cut(s)	319, 1507
MabI	ACCWGGT	1 cut(s)	213
MaeI	CTAG	4 cut(s)	164, 465, 515, 698
MaeII	ACGT	1 cut(s)	470
MaeIII	GTNAC	5 cut(s)	217, 271, 471, 1021, 1600
MalI	GATC	4 cut(s)	25, 561, 604, 1640
MboI	GATC	4 cut(s)	23, 559, 602, 1638
MfeI	CAATTG	2 cut(s)	354, 1248
MflI	RGATCY	2 cut(s)	602, 1638
MhlI	GDGCHC	6 cut(s)	290, 501, 646, 927, 939, 1583
MlyI	GAGTC	2 cut(s)	394, 1689
MmeI	TCCRAC	1 cut(s)	455
Mph1103I	ATGCAT	2 cut(s)	334, 1334
MseI	TTAA	3 cut(s)	105, 1049, 1762
MslI	CAYNNNNRTG	2 cut(s)	930, 1715
MspA1I	CMGCKG	1 cut(s)	1340
MspR9I	CCNGG	5 cut(s)	215, 583, 783, 812, 1735
MunI	CAATTG	2 cut(s)	354, 1248
MvaI	CCWGG	5 cut(s)	215, 583, 783, 812, 1735
MwoI	GCNNNNNNNGC	3 cut(s)	323, 1100, 1533
NcoI	CCATGG	1 cut(s)	1004
NdeII	GATC	4 cut(s)	23, 559, 602, 1638
NlaIII	CATG	8 cut(s)	14, 540, 1008, 1060, 1336, 1525, 1714, 1726
NlaIV	GGNNCC	5 cut(s)	169, 695, 1220, 1221, 1640
NmeAIII	GCCGAG	1 cut(s)	386
NmuCI	GTSAC	1 cut(s)	471
NsbI	TGCGCA	1 cut(s)	1526
NsiI	ATGCAT	2 cut(s)	334, 1334
NspI	RCATGY	2 cut(s)	1060, 1336
PaeR7I	CTCGAG	1 cut(s)	1490
PagI	TCATGA	1 cut(s)	10
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PfeI	GAWTC	3 cut(s)	427, 528, 578
PflMI	CCANNNNNTGG	3 cut(s)	311, 817, 1005
PkrI	GCNGC	8 cut(s)	259, 262, 463, 958, 1342, 1345, 1462, 1538
PleI	GAGTC	2 cut(s)	394, 1689
PpsI	GAGTC	2 cut(s)	394, 1689
PpuMI	RGGWCCY	1 cut(s)	1219
PshAI	GACNNNNGTC	1 cut(s)	864
PsiI	TTATAA	1 cut(s)	1706
Psp124BI	GAGCTC	3 cut(s)	646, 939, 1583
Psp5II	RGGWCCY	1 cut(s)	1219
Psp6I	CCWGG	5 cut(s)	213, 581, 781, 810, 1733
PspFI	CCCAGC	1 cut(s)	1174
PspGI	CCWGG	5 cut(s)	213, 581, 781, 810, 1733
PspN4I	GGNNCC	5 cut(s)	169, 695, 1220, 1221, 1640
PspPI	GGNCC	3 cut(s)	694, 1219, 1324
PspPPI	RGGWCCY	1 cut(s)	1219
PspXI	VCTCGAGB	1 cut(s)	1490
PsrI	GAACNNNNNNTAC	2 cut(s)	470, 502
PstI	CTGCAG	2 cut(s)	463, 1465
PstNI	CAGNNNCTG	1 cut(s)	1343
PsuI	RGATCY	2 cut(s)	602, 1638
PvuII	CAGCTG	1 cut(s)	1340
RsaI	GTAC	6 cut(s)	80, 169, 394, 469, 1413, 1721
RsaNI	GTAC	6 cut(s)	79, 168, 393, 468, 1412, 1720
RseI	CAYNNNNRTG	2 cut(s)	930, 1715
SacI	GAGCTC	3 cut(s)	646, 939, 1583
SalI	GTCGAC	1 cut(s)	98
SaqAI	TTAA	3 cut(s)	105, 1049, 1762
SatI	GCNGC	8 cut(s)	258, 261, 462, 957, 1341, 1344, 1461, 1537
Sau3AI	GATC	4 cut(s)	23, 559, 602, 1638
Sau96I	GGNCC	3 cut(s)	694, 1219, 1324
SchI	GAGTC	2 cut(s)	394, 1689
ScrFI	CCNGG	5 cut(s)	215, 583, 783, 812, 1735
SduI	GDGCHC	6 cut(s)	290, 501, 646, 927, 939, 1583
SexAI	ACCWGGT	1 cut(s)	213
SfaNI	GCATC	2 cut(s)	319, 1507
SfcI	CTRYAG	3 cut(s)	459, 766, 1461
Sfr274I	CTCGAG	1 cut(s)	1490
SinI	GGWCC	2 cut(s)	1219, 1324
SlaI	CTCGAG	1 cut(s)	1490
SmiMI	CAYNNNNRTG	2 cut(s)	930, 1715
SmlI	CTYRAG	2 cut(s)	1186, 1490
SmoI	CTYRAG	2 cut(s)	1186, 1490
SsiI	CCGC	4 cut(s)	557, 838, 897, 1054
SspMI	CTAG	4 cut(s)	164, 465, 515, 698
SstI	GAGCTC	3 cut(s)	646, 939, 1583
StyD4I	CCNGG	5 cut(s)	213, 581, 781, 810, 1733
StyI	CCWWGG	2 cut(s)	697, 1004
TaaI	ACNGT	5 cut(s)	477, 863, 929, 1021, 1597
TaiI	ACGT	1 cut(s)	473
TaqI	TCGA	3 cut(s)	99, 1363, 1491
TaqII	GACCGA	1 cut(s)	1312
TatI	WGTACW	3 cut(s)	78, 392, 1719
TfiI	GAWTC	3 cut(s)	427, 528, 578
Tru1I	TTAA	3 cut(s)	105, 1049, 1762
Tru9I	TTAA	3 cut(s)	105, 1049, 1762
TscAI	CASTG	6 cut(s)	489, 934, 1024, 1210, 1564, 1569
TseFI	GTSAC	1 cut(s)	471
TseI	GCWGC	8 cut(s)	257, 260, 461, 956, 1340, 1343, 1460, 1536
Tsp45I	GTSAC	1 cut(s)	471
TspDTI	ATGAA	7 cut(s)	78, 148, 411, 534, 821, 1468, 1576
TspRI	CASTG	6 cut(s)	489, 934, 1024, 1210, 1564, 1569
Van91I	CCANNNNNTGG	3 cut(s)	311, 817, 1005
VpaK11BI	GGWCC	2 cut(s)	1219, 1324
XagI	CCTNNNNNAGG	1 cut(s)	47
XapI	RAATTY	5 cut(s)	992, 1037, 1044, 1434, 1654
XceI	RCATGY	2 cut(s)	1060, 1336
XhoI	CTCGAG	1 cut(s)	1490
XmaJI	CCTAGG	1 cut(s)	697
XmiI	GTMKAC	1 cut(s)	99
XspI	CTAG	4 cut(s)	164, 465, 515, 698
Zsp2I	ATGCAT	2 cut(s)	334, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.