No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g07320 |
| malus_domestica | MD00G1009400.v1.1 MD05G1295500.v1.1 MD10G1275600.v1.1 |
| prunus_persica | Prupe.4G066600_v2.0.a1 |
| pyrus_communis | pycom05g27450 pycom10g23020 |
| rosa_chinensis | RchiOBHm_Chr5g0011631 |
| rosa_laevigata | RLG00000031850 |
| rosa_multiflora | Rmu_sc0009001.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00064870 |
| rosa_rugosa | Rorug04G0458200 |
| rosa_samantha | Rh5AG089900 Rh5BG085500 Rh5CG099400 Rh5DG085300 |
| rosa_wichuraiana | Rw5G007820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 90 |
| AclWI | GGATC | 1 cut(s) | 48 |
| AcsI | RAATTY | 1 cut(s) | 234 |
| AluBI | AGCT | 3 cut(s) | 19, 187, 212 |
| AluI | AGCT | 3 cut(s) | 19, 187, 212 |
| Alw21I | GWGCWC | 1 cut(s) | 260 |
| Alw26I | GTCTC | 1 cut(s) | 117 |
| AlwI | GGATC | 1 cut(s) | 48 |
| Ama87I | CYCGRG | 1 cut(s) | 50 |
| ApeKI | GCWGC | 3 cut(s) | 16, 124, 203 |
| ApoI | RAATTY | 1 cut(s) | 234 |
| AvaI | CYCGRG | 1 cut(s) | 50 |
| BbsI | GAAGAC | 1 cut(s) | 38 |
| Bbv12I | GWGCWC | 1 cut(s) | 260 |
| BbvI | GCAGC | 3 cut(s) | 28, 136, 190 |
| BcoDI | GTCTC | 1 cut(s) | 117 |
| BisI | GCNGC | 3 cut(s) | 17, 125, 204 |
| BlsI | GCNGC | 3 cut(s) | 18, 126, 205 |
| BmeT110I | CYCGRG | 1 cut(s) | 50 |
| BmiI | GGNNCC | 1 cut(s) | 24 |
| BmsI | GCATC | 1 cut(s) | 55 |
| BpiI | GAAGAC | 1 cut(s) | 38 |
| BpuEI | CTTGAG | 2 cut(s) | 160, 192 |
| BsaI | GGTCTC | 1 cut(s) | 117 |
| BseXI | GCAGC | 3 cut(s) | 28, 136, 190 |
| BsgI | GTGCAG | 2 cut(s) | 35, 143 |
| BsiHKAI | GWGCWC | 1 cut(s) | 260 |
| BsiHKCI | CYCGRG | 1 cut(s) | 50 |
| BsmAI | GTCTC | 1 cut(s) | 117 |
| BsmI | GAATGC | 1 cut(s) | 248 |
| Bso31I | GGTCTC | 1 cut(s) | 117 |
| BsoBI | CYCGRG | 1 cut(s) | 50 |
| Bsp1286I | GDGCHC | 1 cut(s) | 260 |
| Bsp143I | GATC | 1 cut(s) | 40 |
| BspLI | GGNNCC | 1 cut(s) | 24 |
| BspPI | GGATC | 1 cut(s) | 48 |
| BspTNI | GGTCTC | 1 cut(s) | 117 |
| BssMI | GATC | 1 cut(s) | 40 |
| Bst4CI | ACNGT | 1 cut(s) | 75 |
| BstC8I | GCNNGC | 1 cut(s) | 180 |
| BstKTI | GATC | 1 cut(s) | 43 |
| BstMAI | GTCTC | 1 cut(s) | 117 |
| BstMBI | GATC | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 184, 209 |
| BstV1I | GCAGC | 3 cut(s) | 28, 136, 190 |
| BstV2I | GAAGAC | 1 cut(s) | 38 |
| Cac8I | GCNNGC | 1 cut(s) | 180 |
| CviAII | CATG | 1 cut(s) | 170 |
| CviJI | RGCY | 4 cut(s) | 19, 187, 203, 212 |
| CviKI_1 | RGCY | 4 cut(s) | 19, 187, 203, 212 |
| DpnI | GATC | 1 cut(s) | 42 |
| DpnII | GATC | 1 cut(s) | 40 |
| Eco31I | GGTCTC | 1 cut(s) | 117 |
| Eco88I | CYCGRG | 1 cut(s) | 50 |
| FaeI | CATG | 1 cut(s) | 173 |
| FaiI | YATR | 3 cut(s) | 78, 90, 171 |
| FatI | CATG | 1 cut(s) | 169 |
| Fnu4HI | GCNGC | 3 cut(s) | 17, 125, 204 |
| Fsp4HI | GCNGC | 3 cut(s) | 17, 125, 204 |
| GluI | GCNGC | 3 cut(s) | 17, 125, 204 |
| Hin1II | CATG | 1 cut(s) | 173 |
| HindIII | AAGCTT | 1 cut(s) | 185 |
| Hpy166II | GTNNAC | 1 cut(s) | 146 |
| Hpy188I | TCNGA | 2 cut(s) | 27, 40 |
| Hpy188III | TCNNGA | 4 cut(s) | 50, 52, 139, 261 |
| Hpy8I | GTNNAC | 1 cut(s) | 146 |
| HpyCH4III | ACNGT | 1 cut(s) | 75 |
| HpyCH4V | TGCA | 3 cut(s) | 16, 124, 178 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 184, 209 |
| Hsp92II | CATG | 1 cut(s) | 173 |
| Kzo9I | GATC | 1 cut(s) | 40 |
| LpnPI | CCDG | 3 cut(s) | 5, 132, 238 |
| Lsp1109I | GCAGC | 3 cut(s) | 28, 136, 190 |
| LweI | GCATC | 1 cut(s) | 55 |
| MalI | GATC | 1 cut(s) | 42 |
| MboI | GATC | 1 cut(s) | 40 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MhlI | GDGCHC | 1 cut(s) | 260 |
| MluCI | AATT | 1 cut(s) | 234 |
| MseI | TTAA | 1 cut(s) | 197 |
| MslI | CAYNNNNRTG | 1 cut(s) | 253 |
| MspA1I | CMGCKG | 1 cut(s) | 19 |
| Mva1269I | GAATGC | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 184, 209 |
| NdeII | GATC | 1 cut(s) | 40 |
| NlaIII | CATG | 1 cut(s) | 173 |
| NlaIV | GGNNCC | 1 cut(s) | 24 |
| PaeR7I | CTCGAG | 1 cut(s) | 50 |
| PctI | GAATGC | 1 cut(s) | 248 |
| PkrI | GCNGC | 3 cut(s) | 18, 126, 205 |
| PsiI | TTATAA | 1 cut(s) | 90 |
| PspN4I | GGNNCC | 1 cut(s) | 24 |
| PvuII | CAGCTG | 1 cut(s) | 19 |
| RseI | CAYNNNNRTG | 1 cut(s) | 253 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| SatI | GCNGC | 3 cut(s) | 17, 125, 204 |
| Sau3AI | GATC | 1 cut(s) | 40 |
| SduI | GDGCHC | 1 cut(s) | 260 |
| SetI | ASST | 4 cut(s) | 21, 154, 189, 214 |
| SfaNI | GCATC | 1 cut(s) | 55 |
| Sfr274I | CTCGAG | 1 cut(s) | 50 |
| SlaI | CTCGAG | 1 cut(s) | 50 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 253 |
| SmlI | CTYRAG | 3 cut(s) | 50, 139, 207 |
| SmoI | CTYRAG | 3 cut(s) | 50, 139, 207 |
| Sse9I | AATT | 1 cut(s) | 234 |
| SspI | AATATT | 1 cut(s) | 159 |
| TaaI | ACNGT | 1 cut(s) | 75 |
| TaqI | TCGA | 2 cut(s) | 32, 51 |
| TasI | AATT | 1 cut(s) | 234 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| TseI | GCWGC | 3 cut(s) | 16, 124, 203 |
| TspDTI | ATGAA | 1 cut(s) | 186 |
| XapI | RAATTY | 1 cut(s) | 234 |
| XhoI | CTCGAG | 1 cut(s) | 50 |