RIO1 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08120 |
| rosa_chinensis | RchiOBHm_Chr3g0476231 RchiOBHm_Chr5g0022281 RchiOBHm_Chr5g0022321 |
| rosa_laevigata | RLG00000019416 |
| rosa_multiflora | Rmu_sc0025482.1_g000003 |
| rosa_rugosa | Rorug05G0073100.1 Rorug05G0073200 Rorug05G0073300 |
| rosa_samantha | Rh3BG235400 Rh5AG160000 Rh5CG173800 |
| rosa_wichuraiana | Rw5G014300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 135 |
| AgsI | TTSAA | 1 cut(s) | 83 |
| AoxI | GGCC | 1 cut(s) | 95 |
| AspS9I | GGNCC | 1 cut(s) | 95 |
| BceAI | ACGGC | 1 cut(s) | 32 |
| BmgT120I | GGNCC | 1 cut(s) | 95 |
| BmiI | GGNNCC | 1 cut(s) | 96 |
| BpuEI | CTTGAG | 1 cut(s) | 140 |
| BshFI | GGCC | 1 cut(s) | 97 |
| BsnI | GGCC | 1 cut(s) | 97 |
| BspANI | GGCC | 1 cut(s) | 97 |
| BspLI | GGNNCC | 1 cut(s) | 96 |
| Bst4CI | ACNGT | 1 cut(s) | 62 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 25 |
| BsuRI | GGCC | 1 cut(s) | 97 |
| Cfr13I | GGNCC | 1 cut(s) | 95 |
| CviJI | RGCY | 3 cut(s) | 19, 97, 149 |
| CviKI_1 | RGCY | 3 cut(s) | 19, 97, 149 |
| Eco57I | CTGAAG | 1 cut(s) | 135 |
| EcoO109I | RGGNCCY | 1 cut(s) | 95 |
| FaiI | YATR | 6 cut(s) | 30, 32, 34, 70, 87, 171 |
| HaeIII | GGCC | 1 cut(s) | 97 |
| Hpy166II | GTNNAC | 1 cut(s) | 56 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 1 cut(s) | 119 |
| Hpy8I | GTNNAC | 1 cut(s) | 56 |
| HpyAV | CCTTC | 1 cut(s) | 108 |
| HpyCH4III | ACNGT | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 2 cut(s) | 28, 68 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 25 |
| LpnPI | CCDG | 2 cut(s) | 24, 87 |
| MluCI | AATT | 1 cut(s) | 156 |
| MnlI | CCTC | 2 cut(s) | 85, 128 |
| MseI | TTAA | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 25 |
| NlaIV | GGNNCC | 1 cut(s) | 96 |
| PspN4I | GGNNCC | 1 cut(s) | 96 |
| PspPI | GGNCC | 1 cut(s) | 95 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| Sau96I | GGNCC | 1 cut(s) | 95 |
| SetI | ASST | 1 cut(s) | 139 |
| SgeI | CNNG | 7 cut(s) | 24, 32, 51, 74, 86, 131, 155 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| Sse9I | AATT | 1 cut(s) | 156 |
| TaaI | ACNGT | 1 cut(s) | 62 |
| TasI | AATT | 1 cut(s) | 156 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |