RchiOBHm_Chr5g0023021

YTH domain-containing family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0006572
Physical Location & Seq
Forward (+)
17010362 .. 17014505
4144 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30292

Sequence Viewer

Length: 1725 bp
ATGGCTGCTCCTCAATTTGAACAACACAATCCCCATCCTCATCAGAAAACTCCCAAACAAGAAGAAGGGAAAGAAAAGGAATCAAACCCAGATGCTCAATCCACAGAGTCCTTCCAATCCAATCTGTCCCTCTGCAAGGATGGAAGCTCATCTGATGCAGCATCATGCATATCAACCGCAGGAGATACAACTGCTAGTGTGAAAAAAGGTGATGCAGATGTAGATACAGATTATGAATCCATGGCTTCCTATCCAACAACCGCCTATTATGGATATAGCTATCCAGGTAGTTATGATATGGAAAACCAAGGATACTATGTCGGTGGAAGTACTGGGATGGAAGCTCAATACCCTGTCATGCAAGCAGATAATGGCTCTTTTGTCTACTTGATGCCAGGATATCAGCCTGGCTATGATCCTTACACGCAGTACCTGCCCATGACTACCATCAGTAGTGATGGACAATATGTCGGTCAACAGATGTATTCACCGATCAGCCCCATATACCAATCTCCAATCAATTCCCCTGGATATAATATCCCCTCTCCTCATCCTTACGGGGAGTTAGTCCCAACACCCTACTTGTGGGACCCATCTCTTATTGCAGATGGAACATATGGAAATGGCTACAATGGAGTTTTAGAAACACCGACTTCTAAATCTAATTTCTCATCCCCTAGTTACACTCGTGCTCCGTTCTCTAAATCTTTTACACCACCTTCAGGCAACGCTCCTTTAGAGACTAAGAGCTCAAGTTATGGTGCACGAAATCAGCCAAAACCAGTGAATAAGGCCTCACTGCATGCTCCGACTCTTCAATCAGAAGCAGCAGCGAAAGGGTACTATTCTGTTGCAAAGTTTCCTGTCTATAACCAAGGGACAGGTGGTTTGCTCTATCCAAACAATTCGTTAAAAGCAAATCCAAAGAGTTGGGGTGGTCCTGAGAAGTTGAAAACAAGAAGCAAGGCTAATAGTGTTAGAGATATCAATTTGTTCAGTGAGAAGAACCATGGTCCCAGAACAACCAATCCTAAAGGCGCCTTGGTCTCCCTGGCTGACAAGGAGAATGGAAAATGTGACAGCACAACATCTATTATCAGGAAGGATCAATATAACCTTCCTGACTTTCCAACCAAATATGAGCAGGCACTTTTCTTTGTTATCAAATCGTACAGTGAAGACGATATTCATAAGAGCATTAAGTACAATGTATGGGCTAGTACTCCTAATGGGAATAGGAGGCTGGACAATGCTTATCAAGATGCACAAGAGAATGCGGCACAGAAAGGCTGCAAATGTCCTTTGTTCCTCTTCTTTTCGGTTAATGCAAGTGGTCAGTTCTGTGGAGTAGCTGAGATGGTTGGCCGTGTTGATTTTAATAAGAACATGGATTTCTGGCAACAGGATAAGTGGAATGGTTATTTCCCAGTCAAGTGGCATGTCATAAAAGATGTTCCAAATCCTCAGTTACGACATATAATACTTGAGAATAATGAAAACAAGCCTGTGACCAATAGTCGAGACACTCAAGAGGTCAAATTCCTTCAGGGTATCGAAATGTTGAACATTTTCAAAAATTATTCATCAAAGACATCAATATTGGACGACTTTGATTTCTATGAAAGCCGTCAGAAAGTGATGCAAGAGAAGAGGATCAGGCAGTCTACGCCTTACCATGATTTGCAGCATAAAATAGAAGAATTGACTATCACTGCTTTGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

574

Amino Acids

64.05

Weight (kDa)

6.05

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 385 - 525 3.3e-47 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 441
AccB1I GGYRCC 1 cut(s) 1037
AccI GTMKAC 2 cut(s) 384, 1664
AciI CCGC 3 cut(s) 177, 261, 1277
AclWI GGATC 3 cut(s) 410, 1113, 1661
AcoI YGGCCR 1 cut(s) 1363
AcsI RAATTY 1 cut(s) 1538
AcuI CTGAAG 2 cut(s) 705, 1529
AcyI GRCGYC 1 cut(s) 1038
AfaI GTAC 6 cut(s) 331, 431, 842, 1172, 1205, 1222
AfiI CCNNNNNNNGG 3 cut(s) 136, 585, 722
AgsI TTSAA 5 cut(s) 20, 818, 952, 1564, 1573
AhdI GACNNNNNGTC 2 cut(s) 467, 1515
AjnI CCWGG 5 cut(s) 283, 394, 406, 526, 1050
AloI GAACNNNNNNTCC 2 cut(s) 1012, 1044
AluBI AGCT 5 cut(s) 147, 279, 344, 750, 1352
AluI AGCT 5 cut(s) 147, 279, 344, 750, 1352
Alw21I GWGCWC 3 cut(s) 694, 752, 766
Alw26I GTCTC 3 cut(s) 734, 1051, 1515
Alw44I GTGCAC 1 cut(s) 762
AlwI GGATC 3 cut(s) 410, 1113, 1661
AlwNI CAGNNNCTG 1 cut(s) 433
AoxI GGCC 2 cut(s) 792, 1363
ApaLI GTGCAC 1 cut(s) 762
ApeKI GCWGC 6 cut(s) 5, 158, 827, 830, 1290, 1684
ApoI RAATTY 1 cut(s) 1538
ArsI GACNNNNNNTTYG 2 cut(s) 871, 903
Asp700I GAANNNNTTC 1 cut(s) 1568
AspLEI GCGC 1 cut(s) 1040
AspS9I GGNCC 3 cut(s) 589, 938, 1013
AsuHPI GGTGA 2 cut(s) 221, 480
AvaII GGWCC 3 cut(s) 589, 938, 1013
BaeGI GKGCMC 1 cut(s) 766
BanI GGYRCC 1 cut(s) 1037
BanII GRGCYC 1 cut(s) 752
BauI CACGAG 1 cut(s) 687
BbsI GAAGAC 1 cut(s) 1185
Bbv12I GWGCWC 3 cut(s) 694, 752, 766
BbvI GCAGC 5 cut(s) 170, 839, 842, 1277, 1696
BccI CCATC 8 cut(s) 42, 134, 331, 452, 455, 601, 602, 1351
BceAI ACGGC 2 cut(s) 1350, 1611
BciT130I CCWGG 5 cut(s) 285, 396, 408, 528, 1052
BciVI GTATCC 1 cut(s) 305
BcoDI GTCTC 3 cut(s) 734, 1051, 1515
BfaI CTAG 3 cut(s) 195, 678, 1218
BfoI RGCGCY 1 cut(s) 1041
BfuAI ACCTGC 1 cut(s) 441
BfuI GTATCC 1 cut(s) 305
BisI GCNGC 7 cut(s) 6, 159, 828, 831, 1278, 1291, 1685
BlsI GCNGC 7 cut(s) 7, 160, 829, 832, 1279, 1292, 1686
BmcAI AGTACT 2 cut(s) 331, 1222
Bme1390I CCNGG 5 cut(s) 285, 396, 408, 528, 1052
Bme18I GGWCC 3 cut(s) 589, 938, 1013
BmeRI GACNNNNNGTC 2 cut(s) 467, 1515
BmgT120I GGNCC 3 cut(s) 589, 938, 1013
BmiI GGNNCC 4 cut(s) 590, 591, 1015, 1039
BmrFI CCNGG 5 cut(s) 285, 396, 408, 528, 1052
BmrI ACTGGG 2 cut(s) 342, 1421
BmsI GCATC 7 cut(s) 82, 145, 170, 202, 381, 1252, 1629
BmuI ACTGGG 2 cut(s) 342, 1421
BpiI GAAGAC 1 cut(s) 1185
BpuEI CTTGAG 3 cut(s) 736, 1505, 1512
BsaHI GRCGYC 1 cut(s) 1038
BsaI GGTCTC 1 cut(s) 1051
BsaJI CCNNGG 7 cut(s) 240, 307, 526, 874, 1009, 1041, 1050
BsaXI ACNNNNNCTCC 2 cut(s) 676, 706
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 585, 722
Bse1I ACTGG 3 cut(s) 337, 782, 1427
BseBI CCWGG 5 cut(s) 285, 396, 408, 528, 1052
BseDI CCNNGG 7 cut(s) 240, 307, 526, 874, 1009, 1041, 1050
BseGI GGATG 5 cut(s) 34, 145, 342, 550, 671
BseLI CCNNNNNNNGG 3 cut(s) 136, 585, 722
BseMII CTCAG 3 cut(s) 933, 1344, 1478
BseNI ACTGG 3 cut(s) 337, 782, 1427
BseRI GAGGAG 1 cut(s) 537
BseSI GKGCMC 1 cut(s) 766
BseXI GCAGC 5 cut(s) 170, 839, 842, 1277, 1696
BshFI GGCC 2 cut(s) 794, 1365
BshNI GGYRCC 1 cut(s) 1037
BsiHKAI GWGCWC 3 cut(s) 694, 752, 766
BslFI GGGAC 5 cut(s) 112, 554, 602, 892, 999
BslI CCNNNNNNNGG 3 cut(s) 136, 585, 722
BsmAI GTCTC 3 cut(s) 734, 1051, 1515
BsmFI GGGAC 5 cut(s) 112, 554, 602, 892, 999
BsmI GAATGC 1 cut(s) 1279
BsnI GGCC 2 cut(s) 794, 1365
Bso31I GGTCTC 1 cut(s) 1051
Bsp1286I GDGCHC 3 cut(s) 694, 752, 766
Bsp143I GATC 4 cut(s) 415, 492, 1105, 1653
Bsp19I CCATGG 2 cut(s) 240, 1009
BspACI CCGC 3 cut(s) 177, 261, 1277
BspANI GGCC 2 cut(s) 794, 1365
BspCNI CTCAG 3 cut(s) 934, 1345, 1477
BspLI GGNNCC 4 cut(s) 590, 591, 1015, 1039
BspMI ACCTGC 1 cut(s) 441
BspPI GGATC 3 cut(s) 410, 1113, 1661
BspT107I GGYRCC 1 cut(s) 1037
BspTNI GGTCTC 1 cut(s) 1051
BsrI ACTGG 3 cut(s) 337, 782, 1427
BssECI CCNNGG 7 cut(s) 240, 307, 526, 874, 1009, 1041, 1050
BssMI GATC 4 cut(s) 415, 492, 1105, 1653
BssNI GRCGYC 1 cut(s) 1038
BssSI CACGAG 1 cut(s) 687
BssT1I CCWWGG 5 cut(s) 240, 307, 874, 1009, 1041
Bst2BI CACGAG 1 cut(s) 687
Bst2UI CCWGG 5 cut(s) 285, 396, 408, 528, 1052
Bst4CI ACNGT 1 cut(s) 1175
Bst6I CTCTTC 3 cut(s) 819, 1316, 1643
BstACI GRCGYC 1 cut(s) 1038
BstAPI GCANNNNNTGC 1 cut(s) 433
BstC8I GCNNGC 3 cut(s) 363, 804, 1146
BstDEI CTNAG 4 cut(s) 744, 942, 1353, 1464
BstDSI CCRYGG 2 cut(s) 240, 1009
BstENI CCTNNNNNAGG 1 cut(s) 134
BstF5I GGATG 5 cut(s) 34, 145, 342, 550, 671
BstH2I RGCGCY 1 cut(s) 1041
BstHHI GCGC 1 cut(s) 1040
BstKTI GATC 4 cut(s) 418, 495, 1108, 1656
BstMAI GTCTC 3 cut(s) 734, 1051, 1515
BstMBI GATC 4 cut(s) 415, 492, 1105, 1653
BstMWI GCNNNNNNNGC 2 cut(s) 433, 1666
BstNI CCWGG 5 cut(s) 285, 396, 408, 528, 1052
BstNSI RCATGY 2 cut(s) 806, 1442
BstSCI CCNGG 5 cut(s) 283, 394, 406, 526, 1050
BstSLI GKGCMC 1 cut(s) 766
BstV1I GCAGC 5 cut(s) 170, 839, 842, 1277, 1696
BstV2I GAAGAC 1 cut(s) 1185
BstXI CCANNNNNNTGG 2 cut(s) 930, 1434
BsuI GTATCC 1 cut(s) 305
BsuRI GGCC 2 cut(s) 794, 1365
BtgI CCRYGG 2 cut(s) 240, 1009
BtsCI GGATG 5 cut(s) 34, 145, 342, 550, 671
BtsI GCAGTG 2 cut(s) 797, 1710
BtsIMutI CAGTG 5 cut(s) 789, 797, 1003, 1180, 1710
BveI ACCTGC 1 cut(s) 441
Cac8I GCNNGC 3 cut(s) 363, 804, 1146
CaiI CAGNNNCTG 1 cut(s) 433
CfoI GCGC 1 cut(s) 1040
Cfr13I GGNCC 3 cut(s) 589, 938, 1013
Csp6I GTAC 6 cut(s) 330, 430, 841, 1171, 1204, 1221
CviAII CATG 9 cut(s) 165, 241, 358, 439, 803, 1010, 1387, 1439, 1676
CviQI GTAC 6 cut(s) 330, 430, 841, 1171, 1204, 1221
DdeI CTNAG 4 cut(s) 744, 942, 1353, 1464
DinI GGCGCC 1 cut(s) 1039
DpnI GATC 4 cut(s) 417, 494, 1107, 1655
DpnII GATC 4 cut(s) 415, 492, 1105, 1653
DriI GACNNNNNGTC 2 cut(s) 467, 1515
EaeI YGGCCR 1 cut(s) 1363
Eam1104I CTCTTC 3 cut(s) 819, 1316, 1643
Eam1105I GACNNNNNGTC 2 cut(s) 467, 1515
EarI CTCTTC 3 cut(s) 819, 1316, 1643
Ecl136II GAGCTC 1 cut(s) 750
Eco130I CCWWGG 5 cut(s) 240, 307, 874, 1009, 1041
Eco147I AGGCCT 1 cut(s) 794
Eco24I GRGCYC 1 cut(s) 752
Eco31I GGTCTC 1 cut(s) 1051
Eco32I GATATC 2 cut(s) 401, 985
Eco47I GGWCC 3 cut(s) 589, 938, 1013
Eco53kI GAGCTC 1 cut(s) 750
Eco57I CTGAAG 2 cut(s) 705, 1529
EcoICRI GAGCTC 1 cut(s) 750
EcoNI CCTNNNNNAGG 1 cut(s) 134
EcoO109I RGGNCCY 1 cut(s) 589
EcoRII CCWGG 5 cut(s) 283, 394, 406, 526, 1050
EcoRV GATATC 2 cut(s) 401, 985
EcoT14I CCWWGG 5 cut(s) 240, 307, 874, 1009, 1041
EcoT22I ATGCAT 1 cut(s) 170
EcoT38I GRGCYC 1 cut(s) 752
EgeI GGCGCC 1 cut(s) 1039
EheI GGCGCC 1 cut(s) 1039
ErhI CCWWGG 5 cut(s) 240, 307, 874, 1009, 1041
FaeI CATG 9 cut(s) 168, 244, 361, 442, 806, 1013, 1390, 1442, 1679
FaqI GGGAC 5 cut(s) 112, 554, 602, 892, 999
FatI CATG 9 cut(s) 164, 240, 357, 438, 802, 1009, 1386, 1438, 1675
FauNDI CATATG 1 cut(s) 616
FblI GTMKAC 2 cut(s) 384, 1664
Fnu4HI GCNGC 7 cut(s) 6, 159, 828, 831, 1278, 1291, 1685
FokI GGATG 5 cut(s) 21, 152, 349, 537, 658
FriOI GRGCYC 1 cut(s) 752
Fsp4HI GCNGC 7 cut(s) 6, 159, 828, 831, 1278, 1291, 1685
FspBI CTAG 3 cut(s) 195, 678, 1218
GlaI GCGC 1 cut(s) 1039
GluI GCNGC 7 cut(s) 6, 159, 828, 831, 1278, 1291, 1685
HaeII RGCGCY 1 cut(s) 1041
HaeIII GGCC 2 cut(s) 794, 1365
HhaI GCGC 1 cut(s) 1040
Hin1I GRCGYC 1 cut(s) 1038
Hin1II CATG 9 cut(s) 168, 244, 361, 442, 806, 1013, 1390, 1442, 1679
Hin6I GCGC 1 cut(s) 1038
HinP1I GCGC 1 cut(s) 1038
HincII GTYRAC 1 cut(s) 476
HindII GTYRAC 1 cut(s) 476
HinfI GANTC 4 cut(s) 80, 107, 236, 811
HphI GGTGA 2 cut(s) 221, 480
Hpy166II GTNNAC 4 cut(s) 385, 476, 764, 1665
Hpy188I TCNGA 5 cut(s) 45, 154, 810, 823, 1632
Hpy188III TCNNGA 6 cut(s) 941, 1099, 1121, 1259, 1520, 1529
Hpy8I GTNNAC 4 cut(s) 385, 476, 764, 1665
HpyAV CCTTC 6 cut(s) 59, 121, 729, 1096, 1127, 1553
HpyCH4III ACNGT 1 cut(s) 1175
HpyF10VI GCNNNNNNNGC 2 cut(s) 433, 1666
HpyF3I CTNAG 4 cut(s) 744, 942, 1353, 1464
Hsp92I GRCGYC 1 cut(s) 1038
Hsp92II CATG 9 cut(s) 168, 244, 361, 442, 806, 1013, 1390, 1442, 1679
HspAI GCGC 1 cut(s) 1038
KasI GGCGCC 1 cut(s) 1037
KflI GGGWCCC 1 cut(s) 589
Kzo9I GATC 4 cut(s) 415, 492, 1105, 1653
LmnI GCTCC 4 cut(s) 13, 697, 736, 811
Lsp1109I GCAGC 5 cut(s) 170, 839, 842, 1277, 1696
LweI GCATC 7 cut(s) 82, 145, 170, 202, 381, 1252, 1629
MaeI CTAG 3 cut(s) 195, 678, 1218
MaeIII GTNAC 4 cut(s) 680, 1076, 1467, 1507
MalI GATC 4 cut(s) 417, 494, 1107, 1655
MboI GATC 4 cut(s) 415, 492, 1105, 1653
MboII GAAGA 7 cut(s) 74, 806, 1015, 1190, 1303, 1660, 1709
MhlI GDGCHC 3 cut(s) 694, 752, 766
MluCI AATT 8 cut(s) 14, 520, 664, 904, 988, 1538, 1576, 1700
Mly113I GGCGCC 1 cut(s) 1038
MlyI GAGTC 2 cut(s) 116, 805
MmeI TCCRAC 3 cut(s) 278, 833, 1154
Mph1103I ATGCAT 1 cut(s) 170
MroXI GAANNNNTTC 1 cut(s) 1568
MseI TTAA 4 cut(s) 911, 1200, 1323, 1377
MspR9I CCNGG 5 cut(s) 285, 396, 408, 528, 1052
Mva1269I GAATGC 1 cut(s) 1279
MvaI CCWGG 5 cut(s) 285, 396, 408, 528, 1052
MwoI GCNNNNNNNGC 2 cut(s) 433, 1666
NarI GGCGCC 1 cut(s) 1038
NcoI CCATGG 2 cut(s) 240, 1009
NdeI CATATG 1 cut(s) 616
NdeII GATC 4 cut(s) 415, 492, 1105, 1653
NlaIII CATG 9 cut(s) 168, 244, 361, 442, 806, 1013, 1390, 1442, 1679
NlaIV GGNNCC 4 cut(s) 590, 591, 1015, 1039
NmuCI GTSAC 2 cut(s) 1076, 1507
NsiI ATGCAT 1 cut(s) 170
NspI RCATGY 2 cut(s) 806, 1442
PaeI GCATGC 1 cut(s) 806
PceI AGGCCT 1 cut(s) 794
PctI GAATGC 1 cut(s) 1279
PdmI GAANNNNTTC 1 cut(s) 1568
PfeI GAWTC 2 cut(s) 80, 236
PkrI GCNGC 7 cut(s) 7, 160, 829, 832, 1279, 1292, 1686
PleI GAGTC 2 cut(s) 115, 805
PluTI GGCGCC 1 cut(s) 1041
PpsI GAGTC 2 cut(s) 115, 805
PpuMI RGGWCCY 1 cut(s) 589
Psp124BI GAGCTC 1 cut(s) 752
Psp5II RGGWCCY 1 cut(s) 589
Psp6I CCWGG 5 cut(s) 283, 394, 406, 526, 1050
PspGI CCWGG 5 cut(s) 283, 394, 406, 526, 1050
PspN4I GGNNCC 4 cut(s) 590, 591, 1015, 1039
PspPI GGNCC 3 cut(s) 589, 938, 1013
PspPPI RGGWCCY 1 cut(s) 589
PstNI CAGNNNCTG 1 cut(s) 433
RsaI GTAC 6 cut(s) 331, 431, 842, 1172, 1205, 1222
RsaNI GTAC 6 cut(s) 330, 430, 841, 1171, 1204, 1221
SacI GAGCTC 1 cut(s) 752
SaqAI TTAA 4 cut(s) 911, 1200, 1323, 1377
SatI GCNGC 7 cut(s) 6, 159, 828, 831, 1278, 1291, 1685
Sau3AI GATC 4 cut(s) 415, 492, 1105, 1653
Sau96I GGNCC 3 cut(s) 589, 938, 1013
ScaI AGTACT 2 cut(s) 331, 1222
SchI GAGTC 2 cut(s) 116, 805
ScrFI CCNGG 5 cut(s) 285, 396, 408, 528, 1052
SduI GDGCHC 3 cut(s) 694, 752, 766
SfaNI GCATC 7 cut(s) 82, 145, 170, 202, 381, 1252, 1629
SfoI GGCGCC 1 cut(s) 1039
SinI GGWCC 3 cut(s) 589, 938, 1013
SmlI CTYRAG 3 cut(s) 751, 1484, 1527
SmoI CTYRAG 3 cut(s) 751, 1484, 1527
SphI GCATGC 1 cut(s) 806
Sse9I AATT 8 cut(s) 14, 520, 664, 904, 988, 1538, 1576, 1700
SseBI AGGCCT 1 cut(s) 794
SsiI CCGC 3 cut(s) 177, 261, 1277
SspDI GGCGCC 1 cut(s) 1037
SspI AATATT 1 cut(s) 1599
SspMI CTAG 3 cut(s) 195, 678, 1218
SstI GAGCTC 1 cut(s) 752
StuI AGGCCT 1 cut(s) 794
StyD4I CCNGG 5 cut(s) 283, 394, 406, 526, 1050
StyI CCWWGG 5 cut(s) 240, 307, 874, 1009, 1041
TaaI ACNGT 1 cut(s) 1175
TaqI TCGA 2 cut(s) 1519, 1554
TaqII GACCGA 1 cut(s) 461
TasI AATT 8 cut(s) 14, 520, 664, 904, 988, 1538, 1576, 1700
TatI WGTACW 3 cut(s) 329, 1203, 1220
TauI GCSGC 1 cut(s) 1280
TfiI GAWTC 2 cut(s) 80, 236
Tru1I TTAA 4 cut(s) 911, 1200, 1323, 1377
Tru9I TTAA 4 cut(s) 911, 1200, 1323, 1377
TscAI CASTG 5 cut(s) 789, 804, 1003, 1180, 1717
TseFI GTSAC 2 cut(s) 1076, 1507
TseI GCWGC 6 cut(s) 5, 158, 827, 830, 1290, 1684
Tsp45I GTSAC 2 cut(s) 1076, 1507
TspDTI ATGAA 5 cut(s) 249, 1178, 1509, 1572, 1635
TspGWI ACGGA 1 cut(s) 684
TspRI CASTG 5 cut(s) 789, 804, 1003, 1180, 1717
VneI GTGCAC 1 cut(s) 762
VpaK11BI GGWCC 3 cut(s) 589, 938, 1013
XagI CCTNNNNNAGG 1 cut(s) 134
XapI RAATTY 1 cut(s) 1538
XceI RCATGY 2 cut(s) 806, 1442
XcmI CCANNNNNNNNNTGG 1 cut(s) 881
XmiI GTMKAC 2 cut(s) 384, 1664
XmnI GAANNNNTTC 1 cut(s) 1568
XspI CTAG 3 cut(s) 195, 678, 1218
ZrmI AGTACT 2 cut(s) 331, 1222
Zsp2I ATGCAT 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.