RchiOBHm_Chr5g0052151

Histone-lysine N-methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
53772366 .. 53773105
740 bp
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UTR
Exon/CDS
Intron
PRQ32957

Sequence Viewer

Length: 186 bp
ATGGTTAGGAAGCAGAGACGATATGTAGAGTTTGCAGAAGGCAAGCAGAAAACAAATAGTGAAGTCTTTGACCATTGCGCAATAGATACACTGCTGATTTCTCATGGGACAAGTACACTCTTCATGAAGGACCTTTTGAGGAGGTTGGAGCAACGAGCTGAAACTTTTATCAATGGGGTAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

61

Amino Acids

7.14

Weight (kDa)

7.95

Isoelectric Point (pI)

34.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 79
AfaI GTAC 1 cut(s) 115
AluBI AGCT 1 cut(s) 158
AluI AGCT 1 cut(s) 158
Alw26I GTCTC 1 cut(s) 10
AspLEI GCGC 1 cut(s) 80
AspS9I GGNCC 1 cut(s) 130
AvaII GGWCC 1 cut(s) 130
BcoDI GTCTC 1 cut(s) 10
Bme18I GGWCC 1 cut(s) 130
BmgT120I GGNCC 1 cut(s) 130
Bse3DI GCAATG 1 cut(s) 73
BseMI GCAATG 1 cut(s) 73
BseRI GAGGAG 1 cut(s) 154
BslFI GGGAC 1 cut(s) 121
BsmAI GTCTC 1 cut(s) 10
BsmBI CGTCTC 1 cut(s) 10
BsmFI GGGAC 1 cut(s) 121
BspHI TCATGA 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 73
Bst6I CTCTTC 1 cut(s) 125
BstC8I GCNNGC 1 cut(s) 44
BstHHI GCGC 1 cut(s) 80
BstMAI GTCTC 1 cut(s) 10
BtsI GCAGTG 1 cut(s) 89
BtsIMutI CAGTG 1 cut(s) 89
Cac8I GCNNGC 1 cut(s) 44
CciI TCATGA 1 cut(s) 123
CfoI GCGC 1 cut(s) 80
Cfr13I GGNCC 1 cut(s) 130
Csp6I GTAC 1 cut(s) 114
CviAII CATG 2 cut(s) 104, 124
CviJI RGCY 1 cut(s) 158
CviKI_1 RGCY 1 cut(s) 158
CviQI GTAC 1 cut(s) 114
Eam1104I CTCTTC 1 cut(s) 125
EarI CTCTTC 1 cut(s) 125
Eco47I GGWCC 1 cut(s) 130
EcoO109I RGGNCCY 1 cut(s) 130
Esp3I CGTCTC 1 cut(s) 10
FaeI CATG 2 cut(s) 107, 127
FaiI YATR 3 cut(s) 24, 105, 125
FaqI GGGAC 1 cut(s) 121
FatI CATG 2 cut(s) 103, 123
FspI TGCGCA 1 cut(s) 79
GlaI GCGC 1 cut(s) 79
HhaI GCGC 1 cut(s) 80
Hin1II CATG 2 cut(s) 107, 127
Hin6I GCGC 1 cut(s) 78
HinP1I GCGC 1 cut(s) 78
Hpy166II GTNNAC 1 cut(s) 116
Hpy188III TCNNGA 1 cut(s) 124
Hpy8I GTNNAC 1 cut(s) 116
HpyAV CCTTC 2 cut(s) 32, 121
HpyCH4V TGCA 1 cut(s) 35
Hsp92II CATG 2 cut(s) 107, 127
HspAI GCGC 1 cut(s) 78
LmnI GCTCC 1 cut(s) 148
MboII GAAGA 1 cut(s) 112
MmeI TCCRAC 1 cut(s) 126
MnlI CCTC 2 cut(s) 132, 135
NlaIII CATG 2 cut(s) 107, 127
NsbI TGCGCA 1 cut(s) 79
PagI TCATGA 1 cut(s) 123
PpuMI RGGWCCY 1 cut(s) 130
Psp5II RGGWCCY 1 cut(s) 130
PspPI GGNCC 1 cut(s) 130
PspPPI RGGWCCY 1 cut(s) 130
RsaI GTAC 1 cut(s) 115
RsaNI GTAC 1 cut(s) 114
Sau96I GGNCC 1 cut(s) 130
SetI ASST 3 cut(s) 135, 146, 160
SgeI CNNG 5 cut(s) 55, 116, 123, 136, 167
SinI GGWCC 1 cut(s) 130
TatI WGTACW 1 cut(s) 113
TscAI CASTG 1 cut(s) 96
TspDTI ATGAA 2 cut(s) 112, 140
TspRI CASTG 1 cut(s) 96
VpaK11BI GGWCC 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.