RchiOBHm_Chr7g0208161

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
25582284 .. 25583117
834 bp
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UTR
Exon/CDS
Intron
PRQ18629

Sequence Viewer

Length: 126 bp
ATGAGTTATGCACTTTTTAAGTGTAATCAGTTCGATGCATATTGTTTTTGGCTGCAGGAGTCATTTGTTTTTAGCGAGCTAAGAAGTGGGTTTTTGAATTGCAAAGACAAGCAAATCCAACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

41

Amino Acids

4.95

Weight (kDa)

5.96

Isoelectric Point (pI)

65.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 97
AluBI AGCT 1 cut(s) 79
AluI AGCT 1 cut(s) 79
ApeKI GCWGC 1 cut(s) 52
BbvI GCAGC 1 cut(s) 39
BfmI CTRYAG 1 cut(s) 53
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
BmsI GCATC 1 cut(s) 25
BseXI GCAGC 1 cut(s) 39
BspMAI CTGCAG 1 cut(s) 57
BstC8I GCNNGC 1 cut(s) 77
BstDEI CTNAG 1 cut(s) 80
BstSFI CTRYAG 1 cut(s) 53
BstV1I GCAGC 1 cut(s) 39
Cac8I GCNNGC 1 cut(s) 77
CviJI RGCY 2 cut(s) 52, 79
CviKI_1 RGCY 2 cut(s) 52, 79
DdeI CTNAG 1 cut(s) 80
EcoT22I ATGCAT 1 cut(s) 40
FaiI YATR 2 cut(s) 9, 40
Fnu4HI GCNGC 1 cut(s) 53
Fsp4HI GCNGC 1 cut(s) 53
FspEI CC 4 cut(s) 34, 41, 72, 73
GluI GCNGC 1 cut(s) 53
HinfI GANTC 1 cut(s) 59
HpyCH4V TGCA 4 cut(s) 11, 38, 55, 102
HpyF3I CTNAG 1 cut(s) 80
LpnPI CCDG 1 cut(s) 41
Lsp1109I GCAGC 1 cut(s) 39
LweI GCATC 1 cut(s) 25
MluCI AATT 1 cut(s) 97
MlyI GAGTC 1 cut(s) 68
Mph1103I ATGCAT 1 cut(s) 40
MseI TTAA 2 cut(s) 18, 124
NsiI ATGCAT 1 cut(s) 40
PkrI GCNGC 1 cut(s) 54
PleI GAGTC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 67
PstI CTGCAG 1 cut(s) 57
SaqAI TTAA 2 cut(s) 18, 124
SatI GCNGC 1 cut(s) 53
SchI GAGTC 1 cut(s) 68
SetI ASST 1 cut(s) 81
SfaNI GCATC 1 cut(s) 25
SfcI CTRYAG 1 cut(s) 53
SgeI CNNG 3 cut(s) 68, 88, 121
Sse9I AATT 1 cut(s) 97
TaqI TCGA 1 cut(s) 33
TasI AATT 1 cut(s) 97
Tru1I TTAA 2 cut(s) 18, 124
Tru9I TTAA 2 cut(s) 18, 124
TseI GCWGC 1 cut(s) 52
Zsp2I ATGCAT 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.