Rorug04G0211300

Histone-lysine N-methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0018147
Physical Location & Seq
Forward (+)
36777781 .. 36781074
3294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0211300.1

Sequence Viewer

Length: 2070 bp
ATGGGTGTCAAAGCCGGCTCCGTGATAAGCCGGCTCCGGTATCTAACCAAACCTTCGCACCCAACTGAAGCCAAAGCCGTAACCAACACAATCCTCACTCACCTCACTTCCGGCCGTCTCCGAAAAGCCGTCTCCATCCTCTTCTCTTCCCCATTCCCCTTCCACTTCTCCCTCTACGCCCACCTCTTCCACCTCTGCTCCTCCTCCCGCGCAGTTCTCGAGGCCCGCAAAGTCGAGTCCCATCTCGTCACCTTCTCCCCCACCCCGCCCATTTTCCTCCTCAACCGCGCCATCGAGACCTACGCGAAATGTGGGTCCTTGGGAGACGCGCGGGAGCTGTTCGACGAAATGCCCCAGAGAGACGGTGGGTCTTGGAACGCCATGATCAAGGCGTATTCCCAAAGTAGGTGTCCCGAGGATGCTCTGGTTTCGTTTTTGGATATGAATAGAGCCGGGTTTTTGCCGAATGAGGTTACTTTCGCTGGTGTTCTCGGCTCGTGTGCTGCCGTTTTGGAGTTTTGGGTTTTGAGGCAAGTTCATGGTCTTGTTGTGAAGTATGGTTTTGGCGGGAATGTGATTTTGGGGAGTTCGCTCGTTGATGTTTATGGGAAGTGTGGGGTTATGAGTGATGCGAGGAGAGTGTTTGATGAGATGGAAAACCCGAATGATGTTTCTTGGAATATAATCGTGAGGAGGTATCTTGAGATGGGTGATGGAATGGAGGCGGTAATGATGTTTTTCCGGATGCTTGTGGCGGGTGTCAGGCCGTTGAAGTTTACTTTTTCTAATGCTCTTGTTGCTTGTTCGAGCGCCTTTGCACTTGTGGAGGGGAAGCGGATACATGGAGTTGGGGTTAAAATGGGTTTTGAAGATGATGAGGTTGTTTTGTGCTCCCTCATCGATATGTATGTTAAATGCGGGAAGCTAGAACATGCTCATGCAATTTTTGATCAGCCCCATTCGAAAAACTTGATTTCTTGGACGTCACTTGTGTCTGGATATGCAATGAGTGGACAAACATGGAAGGCAAGGGAGTTGTTCAATGAAATGCCTGAACGGAATGTGATATCTTGGAATGCAATGTTGGCAGGGTATACTCGTTACTTCCAATGGGAAGAGGCGTTGGATTTTATATTTTTGATGCAGAACACCACCAAAGATATAGACCAGGTCACTCTTGGGTTGATCCTAAATGTATGTGCTGGCCTCTCAGATGTTGAAATGGGAAAACAGGTTCATGGATTCATTTACCGACATGGATTTTGTTCCAATCTCTTTGTTGGCAATGGTCTTCTCTACATGTATGGTCGATGTGGTAACTTGAGAAATTCCAAAACAGTCTGGTTTCACCAGATTAGTCCATCACGGGATACAGTTTCTTGGAATAGTTTGTTGACAAACTATGCTTCACATCGTCTGAGTGAACTGGCAATGACAATCTTCTATGAGATGCAATGTGAGACAACACCTAACGAGATTACATTTGCAACTCTCCTTTCAGCATGTGCAAATATTTTTGCTCTTCAGCAAGGCAAACAAATTCATGGTTTTATGATTAGAAATGGTTACATAATAGATACCGTGGTTAGAGGGGCTTTGGTTGACATGTATTCCAAGTGTCATTCTATTGAGTATGCTTTTATGGTTTTCAAAGGTGGGACTTCAAAAGATGTGATTCTTTGTAACTCCTTGATTTTGGGATGCTGTCACAATAATAGAATGAGACAGATATTTAAATTGTTTCGTTTGATGAAGGAAGAAGGAATTAAGCCAGATCATATCACATTTCGAGGCATTTTGTATGCTTGTACTTGTGAAGGTCTTGTTGAGTTGGGAAAGCAGTATTTTGAATCAATGAGCAATGATTATGGTATTATACCTCGATTAGAGCACTATGAGTGCATGATTGAACTCTACAGCCAGTGTGGGTACATGGATGAGCTTGAAACCTTTGTAAGGAATATGCCATTTGATCCCACAGTCCCAATGTTAACAGGAGTTGTGGATGCTTGTAAAAGACATGGATGCCTGAGATTTGGACAATGGGCTGTTCAACGACTTAATAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SET TPR_12 zf-MYND

Protein Analysis

689

Amino Acids

77.72

Weight (kDa)

7.51

Isoelectric Point (pI)

42.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 124 - 168 3.7e-07 PPR repeat family
PPR PF01535 325 - 355 4.9e-07 PPR repeat
PPR_2 PF13041 456 - 504 2.6e-07 PPR repeat family
PPR_2 PF13041 556 - 603 2.7e-12 PPR repeat family
PPR_3 PF13812 556 - 603 3e-06 Pentatricopeptide repeat domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 986
AccI GTMKAC 1 cut(s) 1094
AccII CGCG 5 cut(s) 210, 288, 305, 329, 331
AccIII TCCGGA 1 cut(s) 741
AclWI GGATC 2 cut(s) 1180, 1967
AcoI YGGCCR 1 cut(s) 112
AcsI RAATTY 2 cut(s) 1327, 1539
AcuI CTGAAG 2 cut(s) 87, 1508
AcyI GRCGYC 1 cut(s) 983
AfaI GTAC 2 cut(s) 1810, 1931
AfiI CCNNNNNNNGG 2 cut(s) 405, 1956
AflIII ACRYGT 2 cut(s) 1299, 1605
AhdI GACNNNNNGTC 1 cut(s) 367
AjnI CCWGG 1 cut(s) 1167
AjuI GAANNNNNNNTTGG 4 cut(s) 563, 595, 1067, 1099
AloI GAACNNNNNNTCC 2 cut(s) 1218, 1250
AluBI AGCT 3 cut(s) 337, 925, 1942
AluI AGCT 3 cut(s) 337, 925, 1942
Alw21I GWGCWC 2 cut(s) 893, 1893
Alw26I GTCTC 7 cut(s) 122, 136, 290, 318, 354, 1454, 1717
AlwI GGATC 2 cut(s) 1180, 1967
Ama87I CYCGRG 2 cut(s) 218, 413
Aor13HI TCCGGA 1 cut(s) 741
AoxI GGCC 4 cut(s) 112, 222, 764, 1204
ApeKI GCWGC 1 cut(s) 503
ApoI RAATTY 2 cut(s) 1327, 1539
ArsI GACNNNNNNTTYG 6 cut(s) 299, 331, 394, 426, 1245, 1277
AspLEI GCGC 4 cut(s) 212, 290, 331, 812
AspS9I GGNCC 2 cut(s) 223, 315
AsuC2I CCSGG 1 cut(s) 454
AsuHPI GGTGA 4 cut(s) 92, 241, 722, 1340
AsuII TTCGAA 1 cut(s) 962
AvaI CYCGRG 2 cut(s) 218, 413
AvaII GGWCC 1 cut(s) 315
BaeI ACNNNNGTAYC 2 cut(s) 1569, 1602
BauI CACGAG 1 cut(s) 496
BbsI GAAGAC 1 cut(s) 1283
Bbv12I GWGCWC 2 cut(s) 893, 1893
BbvI GCAGC 1 cut(s) 490
BccI CCATC 7 cut(s) 143, 249, 299, 646, 700, 707, 1369
BceAI ACGGC 5 cut(s) 62, 99, 113, 491, 751
BciT130I CCWGG 1 cut(s) 1169
BciVI GTATCC 2 cut(s) 831, 1363
BclI TGATCA 2 cut(s) 384, 949
BcnI CCSGG 1 cut(s) 454
BcoDI GTCTC 7 cut(s) 122, 136, 290, 318, 354, 1454, 1717
BfaI CTAG 1 cut(s) 926
BfmI CTRYAG 1 cut(s) 1915
BfoI RGCGCY 1 cut(s) 813
BfuI GTATCC 2 cut(s) 831, 1363
BisI GCNGC 1 cut(s) 504
BlsI GCNGC 1 cut(s) 505
Bme1390I CCNGG 2 cut(s) 454, 1169
Bme18I GGWCC 1 cut(s) 315
BmeRI GACNNNNNGTC 1 cut(s) 367
BmeT110I CYCGRG 2 cut(s) 218, 413
BmgT120I GGNCC 2 cut(s) 223, 315
BmiI GGNNCC 3 cut(s) 19, 35, 316
BmrFI CCNGG 2 cut(s) 454, 1169
BmsI GCATC 8 cut(s) 409, 619, 735, 1131, 1440, 1691, 1996, 2015
BpiI GAAGAC 1 cut(s) 1283
Bpu14I TTCGAA 1 cut(s) 962
BpuEI CTTGAG 2 cut(s) 722, 1342
BpuMI CCSGG 1 cut(s) 454
Bsa29I ATCGAT 1 cut(s) 900
BsaHI GRCGYC 1 cut(s) 983
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 3 cut(s) 318, 414, 1581
BsaWI WCCGGW 2 cut(s) 36, 741
BsaXI ACNNNNNCTCC 4 cut(s) 182, 212, 837, 867
Bsc4I CCNNNNNNNGG 2 cut(s) 405, 1956
Bse118I RCCGGY 2 cut(s) 14, 30
Bse1I ACTGG 2 cut(s) 1431, 1921
Bse3DI GCAATG 6 cut(s) 1011, 1086, 1291, 1437, 1460, 1867
BseAI TCCGGA 1 cut(s) 741
BseBI CCWGG 1 cut(s) 1169
BseCI ATCGAT 1 cut(s) 900
BseDI CCNNGG 3 cut(s) 318, 414, 1581
BseGI GGATG 7 cut(s) 135, 424, 750, 1706, 1942, 2011, 2030
BseLI CCNNNNNNNGG 2 cut(s) 405, 1956
BseMI GCAATG 6 cut(s) 1011, 1086, 1291, 1437, 1460, 1867
BseMII CTCAG 3 cut(s) 1224, 1409, 2021
BseNI ACTGG 2 cut(s) 1431, 1921
BseRI GAGGAG 5 cut(s) 190, 193, 269, 649, 706
BseX3I CGGCCG 1 cut(s) 112
BseXI GCAGC 1 cut(s) 490
Bsh1236I CGCG 5 cut(s) 210, 288, 305, 329, 331
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 4 cut(s) 114, 224, 766, 1206
BshVI ATCGAT 1 cut(s) 900
BsiEI CGRYCG 1 cut(s) 115
BsiHKAI GWGCWC 2 cut(s) 893, 1893
BsiHKCI CYCGRG 2 cut(s) 218, 413
BsiSI CCGG 6 cut(s) 15, 31, 37, 111, 453, 742
BslFI GGGAC 4 cut(s) 223, 396, 1672, 1967
BslI CCNNNNNNNGG 2 cut(s) 405, 1956
BsmAI GTCTC 7 cut(s) 122, 136, 290, 318, 354, 1454, 1717
BsmBI CGTCTC 4 cut(s) 122, 136, 318, 354
BsmFI GGGAC 4 cut(s) 223, 396, 1672, 1967
BsmI GAATGC 1 cut(s) 1081
BsnI GGCC 4 cut(s) 114, 224, 766, 1206
Bso31I GGTCTC 1 cut(s) 290
BsoBI CYCGRG 2 cut(s) 218, 413
Bsp119I TTCGAA 1 cut(s) 962
Bsp1286I GDGCHC 2 cut(s) 893, 1893
Bsp13I TCCGGA 1 cut(s) 741
Bsp143I GATC 5 cut(s) 384, 949, 1185, 1774, 1972
BspANI GGCC 4 cut(s) 114, 224, 766, 1206
BspCNI CTCAG 3 cut(s) 1223, 1410, 2022
BspDI ATCGAT 1 cut(s) 900
BspEI TCCGGA 1 cut(s) 741
BspFNI CGCG 5 cut(s) 210, 288, 305, 329, 331
BspLI GGNNCC 3 cut(s) 19, 35, 316
BspPI GGATC 2 cut(s) 1180, 1967
BspQI GCTCTTC 1 cut(s) 1527
BspT104I TTCGAA 1 cut(s) 962
BspTNI GGTCTC 1 cut(s) 290
BsrDI GCAATG 6 cut(s) 1011, 1086, 1291, 1437, 1460, 1867
BsrFI RCCGGY 2 cut(s) 14, 30
BsrI ACTGG 2 cut(s) 1431, 1921
BssAI RCCGGY 2 cut(s) 14, 30
BssECI CCNNGG 3 cut(s) 318, 414, 1581
BssMI GATC 5 cut(s) 384, 949, 1185, 1774, 1972
BssNAI GTATAC 1 cut(s) 1095
BssNI GRCGYC 1 cut(s) 983
BssSI CACGAG 1 cut(s) 496
BssT1I CCWWGG 1 cut(s) 318
Bst1107I GTATAC 1 cut(s) 1095
Bst2BI CACGAG 1 cut(s) 496
Bst2UI CCWGG 1 cut(s) 1169
Bst4CI ACNGT 5 cut(s) 365, 1339, 1375, 1582, 1981
Bst6I CTCTTC 5 cut(s) 146, 151, 191, 1110, 1527
BstACI GRCGYC 1 cut(s) 983
BstBI TTCGAA 1 cut(s) 962
BstC8I GCNNGC 4 cut(s) 16, 32, 226, 1204
BstDEI CTNAG 3 cut(s) 1210, 1418, 2030
BstDSI CCRYGG 1 cut(s) 1581
BstENI CCTNNNNNAGG 1 cut(s) 1954
BstF5I GGATG 7 cut(s) 135, 424, 750, 1706, 1942, 2011, 2030
BstFNI CGCG 5 cut(s) 210, 288, 305, 329, 331
BstH2I RGCGCY 1 cut(s) 813
BstHHI GCGC 4 cut(s) 212, 290, 331, 812
BstKTI GATC 5 cut(s) 387, 952, 1188, 1777, 1975
BstMAI GTCTC 7 cut(s) 122, 136, 290, 318, 354, 1454, 1717
BstMBI GATC 5 cut(s) 384, 949, 1185, 1774, 1972
BstMCI CGRYCG 1 cut(s) 115
BstMWI GCNNNNNNNGC 2 cut(s) 797, 1085
BstNI CCWGG 1 cut(s) 1169
BstNSI RCATGY 4 cut(s) 935, 1303, 1506, 1609
BstSCI CCNGG 2 cut(s) 452, 1167
BstSFI CTRYAG 1 cut(s) 1915
BstUI CGCG 5 cut(s) 210, 288, 305, 329, 331
BstV1I GCAGC 1 cut(s) 490
BstV2I GAAGAC 1 cut(s) 1283
BstZ17I GTATAC 1 cut(s) 1095
BstZI CGGCCG 1 cut(s) 112
Bsu15I ATCGAT 1 cut(s) 900
BsuI GTATCC 2 cut(s) 831, 1363
BsuRI GGCC 4 cut(s) 114, 224, 766, 1206
BsuTUI ATCGAT 1 cut(s) 900
BtgI CCRYGG 1 cut(s) 1581
BtsCI GGATG 7 cut(s) 135, 424, 750, 1706, 1942, 2011, 2030
BtsIMutI CAGTG 1 cut(s) 1928
Cac8I GCNNGC 4 cut(s) 16, 32, 226, 1204
CfoI GCGC 4 cut(s) 212, 290, 331, 812
Cfr10I RCCGGY 2 cut(s) 14, 30
Cfr13I GGNCC 2 cut(s) 223, 315
ClaI ATCGAT 1 cut(s) 900
CseI GACGC 1 cut(s) 335
CsiI ACCWGGT 1 cut(s) 1167
Csp6I GTAC 2 cut(s) 1809, 1930
CviQI GTAC 2 cut(s) 1809, 1930
DdeI CTNAG 3 cut(s) 1210, 1418, 2030
DpnI GATC 5 cut(s) 386, 951, 1187, 1776, 1974
DpnII GATC 5 cut(s) 384, 949, 1185, 1774, 1972
DraI TTTAAA 1 cut(s) 1735
DriI GACNNNNNGTC 1 cut(s) 367
EaeI YGGCCR 1 cut(s) 112
EagI CGGCCG 1 cut(s) 112
Eam1104I CTCTTC 5 cut(s) 146, 151, 191, 1110, 1527
Eam1105I GACNNNNNGTC 1 cut(s) 367
EarI CTCTTC 5 cut(s) 146, 151, 191, 1110, 1527
EclXI CGGCCG 1 cut(s) 112
Eco130I CCWWGG 1 cut(s) 318
Eco31I GGTCTC 1 cut(s) 290
Eco32I GATATC 1 cut(s) 1068
Eco47I GGWCC 1 cut(s) 315
Eco52I CGGCCG 1 cut(s) 112
Eco57I CTGAAG 2 cut(s) 87, 1508
Eco88I CYCGRG 2 cut(s) 218, 413
EcoNI CCTNNNNNAGG 1 cut(s) 1954
EcoO109I RGGNCCY 1 cut(s) 315
EcoRII CCWGG 1 cut(s) 1167
EcoRV GATATC 1 cut(s) 1068
EcoT14I CCWWGG 1 cut(s) 318
ErhI CCWWGG 1 cut(s) 318
Esp3I CGTCTC 4 cut(s) 122, 136, 318, 354
FaqI GGGAC 4 cut(s) 223, 396, 1672, 1967
FauI CCCGC 7 cut(s) 215, 233, 273, 324, 560, 748, 911
FbaI TGATCA 2 cut(s) 384, 949
FblI GTMKAC 1 cut(s) 1094
Fnu4HI GCNGC 1 cut(s) 504
FokI GGATG 7 cut(s) 122, 431, 757, 1713, 1949, 2018, 2037
Fsp4HI GCNGC 1 cut(s) 504
FspBI CTAG 1 cut(s) 926
GlaI GCGC 4 cut(s) 211, 289, 330, 811
GluI GCNGC 1 cut(s) 504
HaeII RGCGCY 1 cut(s) 813
HaeIII GGCC 4 cut(s) 114, 224, 766, 1206
HapII CCGG 6 cut(s) 15, 31, 37, 111, 453, 742
HgaI GACGC 1 cut(s) 335
HhaI GCGC 4 cut(s) 212, 290, 331, 812
Hin1I GRCGYC 1 cut(s) 983
Hin6I GCGC 4 cut(s) 210, 288, 329, 810
HinP1I GCGC 4 cut(s) 210, 288, 329, 810
HincII GTYRAC 3 cut(s) 1395, 1603, 1992
HindII GTYRAC 3 cut(s) 1395, 1603, 1992
HinfI GANTC 4 cut(s) 236, 1242, 1675, 1850
HpaI GTTAAC 1 cut(s) 1992
HpaII CCGG 6 cut(s) 15, 31, 37, 111, 453, 742
HphI GGTGA 4 cut(s) 92, 241, 722, 1340
Hpy166II GTNNAC 7 cut(s) 777, 1013, 1095, 1395, 1424, 1603, 1992
Hpy188I TCNGA 3 cut(s) 122, 1213, 1419
Hpy188III TCNNGA 7 cut(s) 218, 295, 413, 688, 701, 742, 996
Hpy8I GTNNAC 7 cut(s) 777, 1013, 1095, 1395, 1424, 1603, 1992
Hpy99I CGWCG 1 cut(s) 347
HpyAV CCTTC 7 cut(s) 63, 169, 262, 1018, 1747, 1754, 1811
HpyCH4III ACNGT 5 cut(s) 365, 1339, 1375, 1582, 1981
HpyCH4IV ACGT 1 cut(s) 983
HpyCH4V TGCA 9 cut(s) 818, 941, 1004, 1079, 1144, 1453, 1487, 1508, 1902
HpyF10VI GCNNNNNNNGC 2 cut(s) 797, 1085
HpyF3I CTNAG 3 cut(s) 1210, 1418, 2030
HpySE526I ACGT 1 cut(s) 983
Hsp92I GRCGYC 1 cut(s) 983
HspAI GCGC 4 cut(s) 210, 288, 329, 810
Kpn2I TCCGGA 1 cut(s) 741
KroI GCCGGC 2 cut(s) 14, 30
KroNI GCCGGC 2 cut(s) 16, 32
Ksp22I TGATCA 2 cut(s) 384, 949
KspAI GTTAAC 1 cut(s) 1992
Kzo9I GATC 5 cut(s) 384, 949, 1185, 1774, 1972
LguI GCTCTTC 1 cut(s) 1527
LmnI GCTCC 5 cut(s) 23, 39, 203, 334, 896
Lsp1109I GCAGC 1 cut(s) 490
LweI GCATC 8 cut(s) 409, 619, 735, 1131, 1440, 1691, 1996, 2015
MabI ACCWGGT 1 cut(s) 1167
MaeI CTAG 1 cut(s) 926
MaeII ACGT 1 cut(s) 983
MalI GATC 5 cut(s) 386, 951, 1187, 1776, 1974
MboI GATC 5 cut(s) 384, 949, 1185, 1774, 1972
MboII GAAGA 9 cut(s) 133, 138, 178, 881, 1127, 1283, 1432, 1514, 1769
MhlI GDGCHC 2 cut(s) 893, 1893
MluCI AATT 5 cut(s) 942, 1327, 1539, 1736, 1764
MlyI GAGTC 1 cut(s) 245
MmeI TCCRAC 1 cut(s) 1104
MroI TCCGGA 1 cut(s) 741
MroNI GCCGGC 2 cut(s) 14, 30
MseI TTAA 6 cut(s) 855, 912, 1734, 1767, 1991, 2061
MslI CAYNNNNRTG 2 cut(s) 902, 936
MspI CCGG 6 cut(s) 15, 31, 37, 111, 453, 742
MspR9I CCNGG 2 cut(s) 454, 1169
Mva1269I GAATGC 1 cut(s) 1081
MvaI CCWGG 1 cut(s) 1169
MvnI CGCG 5 cut(s) 210, 288, 305, 329, 331
MwoI GCNNNNNNNGC 2 cut(s) 797, 1085
NaeI GCCGGC 2 cut(s) 16, 32
NciI CCSGG 1 cut(s) 454
NdeII GATC 5 cut(s) 384, 949, 1185, 1774, 1972
NgoMIV GCCGGC 2 cut(s) 14, 30
NlaIV GGNNCC 3 cut(s) 19, 35, 316
NmeAIII GCCGAG 1 cut(s) 471
NmuCI GTSAC 4 cut(s) 247, 984, 1171, 1706
NspI RCATGY 4 cut(s) 935, 1303, 1506, 1609
NspV TTCGAA 1 cut(s) 962
PaeR7I CTCGAG 1 cut(s) 218
PciI ACATGT 2 cut(s) 1299, 1605
PciSI GCTCTTC 1 cut(s) 1527
PctI GAATGC 1 cut(s) 1081
PdiI GCCGGC 2 cut(s) 16, 32
PfeI GAWTC 3 cut(s) 1242, 1675, 1850
PflFI GACNNNGTC 1 cut(s) 1169
PkrI GCNGC 1 cut(s) 505
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
PpuMI RGGWCCY 1 cut(s) 315
PscI ACATGT 2 cut(s) 1299, 1605
Psp5II RGGWCCY 1 cut(s) 315
Psp6I CCWGG 1 cut(s) 1167
PspGI CCWGG 1 cut(s) 1167
PspN4I GGNNCC 3 cut(s) 19, 35, 316
PspPI GGNCC 2 cut(s) 223, 315
PspPPI RGGWCCY 1 cut(s) 315
PsyI GACNNNGTC 1 cut(s) 1169
RsaI GTAC 2 cut(s) 1810, 1931
RsaNI GTAC 2 cut(s) 1809, 1930
RseI CAYNNNNRTG 2 cut(s) 902, 936
SapI GCTCTTC 1 cut(s) 1527
SaqAI TTAA 6 cut(s) 855, 912, 1734, 1767, 1991, 2061
SatI GCNGC 1 cut(s) 504
Sau3AI GATC 5 cut(s) 384, 949, 1185, 1774, 1972
Sau96I GGNCC 2 cut(s) 223, 315
SchI GAGTC 1 cut(s) 245
ScrFI CCNGG 2 cut(s) 454, 1169
SduI GDGCHC 2 cut(s) 893, 1893
SexAI ACCWGGT 1 cut(s) 1167
SfaNI GCATC 8 cut(s) 409, 619, 735, 1131, 1440, 1691, 1996, 2015
SfcI CTRYAG 1 cut(s) 1915
Sfr274I CTCGAG 1 cut(s) 218
SfuI TTCGAA 1 cut(s) 962
SinI GGWCC 1 cut(s) 315
SlaI CTCGAG 1 cut(s) 218
SmiI ATTTAAAT 1 cut(s) 1735
SmiMI CAYNNNNRTG 2 cut(s) 902, 936
SmlI CTYRAG 3 cut(s) 218, 701, 1321
SmoI CTYRAG 3 cut(s) 218, 701, 1321
Sse9I AATT 5 cut(s) 942, 1327, 1539, 1736, 1764
SspI AATATT 1 cut(s) 1513
SspMI CTAG 1 cut(s) 926
StyD4I CCNGG 2 cut(s) 452, 1167
StyI CCWWGG 1 cut(s) 318
SwaI ATTTAAAT 1 cut(s) 1735
TaaI ACNGT 5 cut(s) 365, 1339, 1375, 1582, 1981
TaiI ACGT 1 cut(s) 986
TasI AATT 5 cut(s) 942, 1327, 1539, 1736, 1764
TatI WGTACW 1 cut(s) 1808
TfiI GAWTC 3 cut(s) 1242, 1675, 1850
Tru1I TTAA 6 cut(s) 855, 912, 1734, 1767, 1991, 2061
Tru9I TTAA 6 cut(s) 855, 912, 1734, 1767, 1991, 2061
TscAI CASTG 1 cut(s) 1928
TseFI GTSAC 4 cut(s) 247, 984, 1171, 1706
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 4 cut(s) 247, 984, 1171, 1706
TspDTI ATGAA 7 cut(s) 458, 527, 1059, 1226, 1234, 1532, 1766
TspGWI ACGGA 2 cut(s) 10, 1072
TspRI CASTG 1 cut(s) 1928
Tth111I GACNNNGTC 1 cut(s) 1169
VpaK11BI GGWCC 1 cut(s) 315
XagI CCTNNNNNAGG 1 cut(s) 1954
XapI RAATTY 2 cut(s) 1327, 1539
XceI RCATGY 4 cut(s) 935, 1303, 1506, 1609
XcmI CCANNNNNNNNNTGG 2 cut(s) 362, 1175
XhoI CTCGAG 1 cut(s) 218
XmiI GTMKAC 1 cut(s) 1094
XspI CTAG 1 cut(s) 926
ZraI GACGTC 1 cut(s) 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.