No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0316491 RchiOBHm_Chr5g0052151 RchiOBHm_Chr7g0208161 RchiOBHm_Chr7g0208911 |
| rosa_roxburghii | Rroxscaffold_3G00257790 Rroxscaffold_7G00179180 |
| rosa_rugosa | Rorug04G0211200 Rorug04G0211300 |
| rosa_samantha | Rh1AG020900 Rh2DG054400 Rh5AG356800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 188 |
| AciI | CCGC | 1 cut(s) | 200 |
| AcoI | YGGCCR | 1 cut(s) | 146 |
| AoxI | GGCC | 2 cut(s) | 146, 214 |
| AspS9I | GGNCC | 1 cut(s) | 215 |
| AsuHPI | GGTGA | 1 cut(s) | 184 |
| BccI | CCATC | 1 cut(s) | 203 |
| BclI | TGATCA | 1 cut(s) | 82 |
| BfaI | CTAG | 1 cut(s) | 247 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 222 |
| BmgT120I | GGNCC | 1 cut(s) | 215 |
| Bse1I | ACTGG | 1 cut(s) | 140 |
| BseMII | CTCAG | 1 cut(s) | 45 |
| BseNI | ACTGG | 1 cut(s) | 140 |
| BseRI | GAGGAG | 1 cut(s) | 112 |
| BseYI | CCCAGC | 1 cut(s) | 181 |
| Bsh1285I | CGRYCG | 1 cut(s) | 222 |
| BshFI | GGCC | 2 cut(s) | 148, 216 |
| BsiEI | CGRYCG | 1 cut(s) | 222 |
| BslFI | GGGAC | 1 cut(s) | 64 |
| BsmFI | GGGAC | 1 cut(s) | 64 |
| BsnI | GGCC | 2 cut(s) | 148, 216 |
| Bsp143I | GATC | 3 cut(s) | 82, 129, 219 |
| BspACI | CCGC | 1 cut(s) | 200 |
| BspANI | GGCC | 2 cut(s) | 148, 216 |
| BspCNI | CTCAG | 1 cut(s) | 46 |
| BsrI | ACTGG | 1 cut(s) | 140 |
| BssMI | GATC | 3 cut(s) | 82, 129, 219 |
| Bst4CI | ACNGT | 1 cut(s) | 238 |
| Bst6I | CTCTTC | 3 cut(s) | 27, 32, 84 |
| BstC8I | GCNNGC | 1 cut(s) | 202 |
| BstDEI | CTNAG | 1 cut(s) | 54 |
| BstKTI | GATC | 3 cut(s) | 85, 132, 222 |
| BstMBI | GATC | 3 cut(s) | 82, 129, 219 |
| BstMCI | CGRYCG | 1 cut(s) | 222 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 222 |
| BsuRI | GGCC | 2 cut(s) | 148, 216 |
| Cac8I | GCNNGC | 1 cut(s) | 202 |
| Cfr13I | GGNCC | 1 cut(s) | 215 |
| CseI | GACGC | 1 cut(s) | 174 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 193, 228 |
| CviJI | RGCY | 5 cut(s) | 11, 23, 59, 148, 216 |
| CviKI_1 | RGCY | 5 cut(s) | 11, 23, 59, 148, 216 |
| DdeI | CTNAG | 1 cut(s) | 54 |
| DpnI | GATC | 3 cut(s) | 84, 131, 221 |
| DpnII | GATC | 3 cut(s) | 82, 129, 219 |
| EaeI | YGGCCR | 1 cut(s) | 146 |
| Eam1104I | CTCTTC | 3 cut(s) | 27, 32, 84 |
| EarI | CTCTTC | 3 cut(s) | 27, 32, 84 |
| FaiI | YATR | 2 cut(s) | 81, 230 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 11, 43 |
| FaqI | GGGAC | 1 cut(s) | 64 |
| FauI | CCCGC | 1 cut(s) | 193 |
| FbaI | TGATCA | 1 cut(s) | 82 |
| FblI | GTMKAC | 1 cut(s) | 188 |
| FspBI | CTAG | 1 cut(s) | 247 |
| GsaI | CCCAGC | 1 cut(s) | 185 |
| HaeIII | GGCC | 2 cut(s) | 148, 216 |
| HgaI | GACGC | 1 cut(s) | 174 |
| HincII | GTYRAC | 1 cut(s) | 189 |
| HindII | GTYRAC | 1 cut(s) | 189 |
| HinfI | GANTC | 1 cut(s) | 142 |
| HphI | GGTGA | 1 cut(s) | 184 |
| Hpy166II | GTNNAC | 1 cut(s) | 189 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| Hpy8I | GTNNAC | 1 cut(s) | 189 |
| Hpy99I | CGWCG | 3 cut(s) | 190, 193, 196 |
| HpyCH4III | ACNGT | 1 cut(s) | 238 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 222 |
| HpyF3I | CTNAG | 1 cut(s) | 54 |
| Ksp22I | TGATCA | 1 cut(s) | 82 |
| Kzo9I | GATC | 3 cut(s) | 82, 129, 219 |
| LpnPI | CCDG | 2 cut(s) | 121, 195 |
| MaeI | CTAG | 1 cut(s) | 247 |
| MaeIII | GTNAC | 2 cut(s) | 232, 238 |
| MalI | GATC | 3 cut(s) | 84, 131, 221 |
| MboI | GATC | 3 cut(s) | 82, 129, 219 |
| MboII | GAAGA | 3 cut(s) | 44, 49, 101 |
| MluCI | AATT | 1 cut(s) | 159 |
| MlyI | GAGTC | 1 cut(s) | 151 |
| MnlI | CCTC | 3 cut(s) | 49, 85, 133 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 222 |
| NdeII | GATC | 3 cut(s) | 82, 129, 219 |
| NmuCI | GTSAC | 2 cut(s) | 232, 238 |
| Ple19I | CGATCG | 1 cut(s) | 222 |
| PleI | GAGTC | 1 cut(s) | 150 |
| PpsI | GAGTC | 1 cut(s) | 150 |
| PspFI | CCCAGC | 1 cut(s) | 181 |
| PspPI | GGNCC | 1 cut(s) | 215 |
| PvuI | CGATCG | 1 cut(s) | 222 |
| SalI | GTCGAC | 1 cut(s) | 187 |
| Sau3AI | GATC | 3 cut(s) | 82, 129, 219 |
| Sau96I | GGNCC | 1 cut(s) | 215 |
| SchI | GAGTC | 1 cut(s) | 151 |
| SetI | ASST | 1 cut(s) | 96 |
| SgrDI | CGTCGACG | 1 cut(s) | 187 |
| Sse9I | AATT | 1 cut(s) | 159 |
| SsiI | CCGC | 1 cut(s) | 200 |
| SspMI | CTAG | 1 cut(s) | 247 |
| TaaI | ACNGT | 1 cut(s) | 238 |
| TaqI | TCGA | 1 cut(s) | 188 |
| TasI | AATT | 1 cut(s) | 159 |
| TseFI | GTSAC | 2 cut(s) | 232, 238 |
| Tsp45I | GTSAC | 2 cut(s) | 232, 238 |
| XmiI | GTMKAC | 1 cut(s) | 188 |
| XspI | CTAG | 1 cut(s) | 247 |